ARSA (Search Result) Help

Search Condition

Advanced Search Quick Search

Field Show examples Hide examples

Primary Accession Number

e.g.	Same as Quick Search
`AA000001`	`PrimaryAccessionNumber:AA000001` `pa:AA000001`
`AA00000*`	`pa:AA00000*`
`/AA00000[1-3]/`	`pa:/AA00000[1-3]/`
`AA000001 AA000002`	`pa:(AA000001 OR AA000002)`

Hide examples

Accession Number

e.g.	Same as Quick Search
`AA000001`	`AccessionNumber:AA000001` `an:AA000001`
`AA00000*`	`an:AA00000*`
`/AA00000[1-3]/`	`an:/AA00000[1-3]/`
`AA000001 AA000002`	`an:(AA000001 OR AA000002)`

Hide examples

Sequence Length

e.g.			Same as Quick Search
`400`	to	`500`	`SequenceLength:[400 TO 500]` `sl:[400 TO 500]`
	to	`500`	`sl:[* TO 500]`
`100`	to		`sl:[100 TO *]`
`450`	to	`450`	`sl:450`

Hide examples

Molecular Type

DNA RNA cRNA mRNA rRNA tRNA PRT

Same as Quick Search
`MolecularType:DNA` `mt:DNA`
`mt:(DNA OR RNA)`

Hide examples

Molecular Form

circular linear

Same as Quick Search
`MolecularForm:circular` `mf:circular`
`mf:(circular OR linear)`

Hide examples

Division

Same as Quick Search
`Division:BCT` `dv:BCT`
`dv:(BCT OR CON)`

Hide examples

Date

e.g.			Same as Quick Search
`20130101`	to	`20131231`	`Date:[20130101 TO 20131231]` `dt:[20130101 TO 20131231]`
	to	`20131231`	`dt:[* TO 20131231]`
`20130101`	to		`dt:[20130101 TO *]`
`20130401`	to	`20130401`	`dt:20130401`

Hide examples

Definition

e.g.	Same as Quick Search
`"catalase gene"`	`Definition:"catalase gene"` `df:"catalase gene"`
`"Homo sapiens cDNA, clone:ABC123, 3' end, expressed in brain"`	`df:"Homo sapiens cDNA, clone:ABC123, 3' end, expressed in brain"`
`/Homo sapiens cDNA, clone:[A-Z0-9]+, 3' end, expressed in brain/`	`df:/Homo sapiens cDNA, clone:[A-Z0-9]+, 3' end, expressed in brain/`

Hide examples

Keyword

e.g.	Same as Quick Search
`BARCODE`	`Keyword:BARCODE` `kw:BARCODE`
`HTGS_*`	`kw:HTGS_*`
`\(3'-EST\)`	`kw:\(3'-EST\)`
`"(3'-EST)"`	`kw:"(3'-EST)"`
`/[35]\'-EST/`	`kw:/[35]\'-EST/`
`/TPA\:(experimental\|reassembly)/`	`kw:/TPA\:(experimental\|reassembly)/`

Hide examples

Organism

e.g.	Same as Quick Search
`"Homo sapiens"`	`Organism:"Homo sapiens"` `og:"Homo sapiens"`
`"Mus musculus" "Rattus norvegicus"`	`og:("Mus musculus" OR "Rattus norvegicus")`

Hide examples

Lineage

e.g.	Same as Quick Search
`Vertebrata`	`Lineage:Vertebrata` `ln:Vertebrata`
`Vertebrata Insecta`	`ln:(Vertebrata OR Insecta)`

Hide examples

Reference Authors

e.g.	Same as Quick Search
`Mishima`	`ReferenceAuthor:Mishima` `ra:Mishima`
`Mishima Shizuoka`	`ra:(Mishima OR Shizuoka)`

Hide examples

Reference Title

e.g.	Same as Quick Search
`"human liver"`	`ReferenceTitle:"human liver"` `rt:"human liver"`
`"stomach cancer" "gastric cancer"`	`rt:("stomach cancer" OR "gastric cancer")`

Hide examples

Reference Journal

e.g.	Same as Quick Search
`"National Institute of Genetics"`	`ReferenceJournal:"National Institute of Genetics"` `rj:"National Institute of Genetics"`

Hide examples

Reference PubmedID

e.g.	Same as Quick Search
`1234567`	`ReferencePubmedID:1234567` `rp:1111111`
`[2222222 TO 3333333]`	`rp:[2222222 TO 3333333]`
`[* TO 3333333]`	`rp:[* TO 3333333]`
`[2222222 TO *]`	`rp:[2222222 TO *]`
`4444444`	`rp:4444444`
`5555555 6666666`	`rp:(5555555 OR 6666666)`

Hide examples

Comment

e.g.	Same as Quick Search
`"Human cDNA sequencing project"`	`Comment:"Human cDNA sequencing project"` `cm:"Human cDNA sequencing project"`

Hide examples

Features

Feature Key	Qualifier Name	Qualifier Value
	`/`	`=""`
more features

e.g.			Same as Quick Search
Feature Key	Qualifier Name	Qualifier Value	Same as Quick Search
		`taxon:9606`	`Feature:"taxon:9606"` `fe:"taxon:9606"`
`source`	`chromosome`	`12`	`FeatureQualifier:("source /chromosome=12" AND "source /clone_lib=lambda gt11 human liver cDNA (GeneTech. No.20)" AND "source /db_xref=taxon:9606" AND "CDS /codon_start=1" AND "CDS /translation=")`
`source`	`clone_lib`	`lambda gt11 human liver cDNA (GeneTech. No.20)`
`source`	`db_xref`	`taxon:9606`
`CDS`	`codon_start`	`1`
`CDS`	`translation`
`source`	`chromosome`	`12`	`fq:("source /chromosome=12" AND "source /clone_lib=lambda gt11 human liver cDNA (GeneTech. No.20)" AND "source /db_xref=taxon:9606" AND "CDS /codon_start=1" AND "CDS /translation=")`
`source`	`clone_lib`	`lambda gt11 human liver cDNA (GeneTech. No.20)`
`source`	`db_xref`	`taxon:9606`
`CDS`	`codon_start`	`1`
`CDS`	`translation`

Hide examples

All Text

e.g.	Same as Quick Search
`human`	`AllText:human` `at:human`

Hide examples

Combine Searches with

Search Condition

Quick Search Advanced Search

Available Fields

Field	Query Formats
Primary Accession Number	Search all wordsPrimaryAccessionNumber:(AB999999 AND AB999998 ...) Search any wordsPrimaryAccessionNumber:(AB999999 OR AB999999 ...) Regexp queryPrimaryAccessionNumber:/regexp/
Accession Number	Search all wordsAccessionNumber:(AB999999 AND AB888888 ...) Search any wordsAccessionNumber:(AB999999 OR AB888888 ...) Regexp queryAccessionNumber:/regexp/
Division	Search any divisionsDivision:(HUM OR PRI ...)
Sequence Length	Search rangingSequenceLength:[450 TO 500]
Molecular Type	Search any molecular typesMolecularType:(mRNA OR DNA ...)
Molecular Form	Search any molecular formsMolecularForm:(circular OR linear)
Date	Search rangingDate:[20090601 TO 20090701]
Definition	Search all wordsDefinition:(partial AND cds ...) Search any wordsDefinition:(partial OR cds ...) Regexp queryDefinition:/regexp/ Search exactly matchDefinition:"partial cds"
Comment	Search all wordsComment:(sequencing AND project ...) Search any wordsComment:(sequencing OR project ...) Regexp queryComment:/regexp/ Search exactly matchComment:"sequencing project"
Keyword	Search all wordsKeyword:(HTC AND HTC_FLI ...) Search any wordsKeyword:(HTC OR HTC_FLI ...) Regexp queryKeyword:/regexp/ Search exactly matchKeyword:"oligo capping"
Organism	Search all wordsOrganism:(Homo AND sapiens ...) Search any wordsOrganism:(Homo OR sapiens ...) Regexp queryOrganism:/regexp/ Search exactly matchOrganism:"Homo sapiens"
Lineage	Search all wordsLineage:(Eukaryota AND Metazoa ...) Search any wordsLineage:(Eukaryota OR Metazoa ...) Regexp queryLineage:/regexp/
Reference Author	Search all wordsReferenceAuthor:(Mishima AND Shizuoka ...) Search any wordsReferenceAuthor:(Mishima OR Shizuoka ...) Regexp queryReferenceAuthor:/regexp/ Search exactly matchReferenceAuthor:"Mishima,H."
Reference Title	Search all wordsReferenceTitle:(expressed AND liver ...) Search any wordsReferenceTitle:(expressed OR liver ...) Regexp queryReferenceTitle:/regexp/ Search exactly matchReferenceTitle:"expressed in human liver"
Reference Journal	Search all wordsReferenceJournal:(30-NOV-2008 AND Hanako ...) Search any wordsReferenceJournal:(30-NOV-2008 OR Hanako ...) Regexp queryReferenceJournal:/regexp/ Search exactly matchReferenceJournal:"Hanako Mishima"
Reference PubmedID	Search all wordsReferencePubmedID:(1111111 AND 1111112 ...) Search any wordsReferencePubmedID:(1111111 OR 1111112 ...) Regexp queryReferencePubmedID:/regexp/ Search rangingReferencePubmedID:[1111110 TO 1111119]
Feature	Search all wordsFeature:(GT200015 AND gt11 ...) Search any wordsFeature:(GT200015 OR gt11 ...) Search exactly matchFeature:"gene=\"GAPD\""
Feature Qualifier	Search one feature-qualifierFeatureQualifier:/source \/clone=GT200015/ Search all feature-qualifiersFeatureQualifier:(/source \/clone=GT200015/ AND /CDS \/gene=GAPD/ ...)
All Text	Search with field_name 'AllText'AllText:any_formats

LOCUS	AB000000 450 bp mRNA linear HUM 01-JUN-2009
DEFINITION	Homo sapiens GAPD mRNA for glyceraldehyde-3-phosphate dehydrogenase, partial cds.
ACCESSION	AB999999 AB888888 AB777777
VERSION	AB000000.1
KEYWORDS	HTC; HTC_FLI; oligo capping.
SOURCE	Homo sapiens (human)
ORGANISM	Homo sapiens
	Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
	Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
	Catarrhini; Hominidae; Homo.
REFERENCE	1 (bases 1 to 450)
AUTHORS	Mishima,H. and Shizuoka,T.
TITLE	Direct Submission
JOURNAL	Submitted (30-NOV-2008) to the DDBJ/EMBL/GenBank databases. Contact:Hanako Mishima National Institute of Genetics, DNA Data Bank of Japan; Yata 1111, Mishima, Shizuoka 411-8540, Japan
PUBMED	1111111
REFERENCE	2
AUTHORS	Mishima,H., Shizuoka,T. and Fuji,I.
TITLE	Glyceraldehyde-3-phosphate dehydrogenase expressed in human liver
JOURNAL	Unpublished (2009)
COMMENT	Human cDNA sequencing project.
FEATURES		Location/Qualifiers
source		1..450
source		/chromosome="12"
source		/clone="GT200015"
source		/clone_lib="lambda gt11 human liver cDNA (GeneTech. No.20)"
source		/db_xref="taxon:9606"
source		/map="12p13"
source		/mol_type="mRNA"
source		/organism="Homo sapiens"
source		/tissue_type="liver"
CDS		86..>450
CDS		/codon_start=1
CDS		/gene="GAPD"
CDS		/product="glyceraldehyde-3-phosphate dehydrogenase"
CDS		/protein_id="BAA12345.1"
CDS		/transl_table=1
CDS		/translation="MAKIKIGINGFGRIGRLVARVALQSDDVELVAVNDPFITTDYMT YMFKYDTVHGQWKHHEVKVKDSKTLLFGEKEVTVFGCRNPKEIPWGETSAEFVVEYTG VFTDKDKAVAQLKGGAKKV"
BASE COUNT 102 a 119 c 131 g 98 t
ORIGIN
1 cccacgcgtc cggtcgcatc gcacttgtag ctctcgaccc ccgcatctca tccctcctct
61 cgcttagttc agatcgaaat cgcaaatggc gaagattaag atcgggatca atgggttcgg
121 gaggatcggg aggctcgtgg ccagggtggc cctgcagagc gacgacgtcg agctcgtcgc
181 cgtcaacgac cccttcatca ccaccgacta catgacatac atgttcaagt atgacactgt
241 gcacggccag tggaagcatc atgaggttaa ggtgaaggac tccaagaccc ttctcttcgg
301 tgagaaggag gtcaccgtgt tcggctgcag gaaccctaag gagatcccat ggggtgagac
361 tagcgctgag tttgttgtgg agtacactgg tgttttcact gacaaggaca aggccgttgc
421 tcaacttaag ggtggtgcta agaaggtctg
//

Search Result

Facet

List of Entries

1 - entries / Number of founds: 339 FlatFile XML Fasta

	PrimaryAccessionNumber	Definition	SequenceLength	MolecularType	Organism
	JN655691	Sepiella maindroni p53 protein (p53) mRNA, complete cds.	1884	mRNA	Sepiella maindroni
	JF923573	Homo sapiens p53 (p53) gene, exon 8 and partial cds.	137	DNA	Homo sapiens
	KY769282	Sheeppox virus isolate Oj1P4 P32 major envelope protein (P53) gene, partial cds.	521	DNA	Sheeppox virus
	U40428	Human tumor suppressor (p53) gene, exon 3, partial cds.	186	DNA	Homo sapiens
	Z12020	H.sapiens mRNA for p53-associated gene.	2372	mRNA	Homo sapiens
	U60804	Danio rerio tumor suppressor p53 (p53) mRNA, complete cds.	2105	mRNA	Danio rerio
	U62133	Canis familiaris p53 gene, partial cds.	2205	DNA	Canis lupus familiaris
	S73757	p53=tumour suppressor {exon 8} [dogs, oral mucosa papilloma cells, Genomic Mutant, 96 nt].	96	DNA	Canis lupus familiaris
	S83123	p53=tumor suppressor gene [horses, spleen, mRNA Partial, 789 nt].	789	mRNA	Equidae
	M75144	M.auratus tumor suppressing protein (p53) gene, complete cds.	2058	mRNA	Mesocricetus auratus
	KF957444	Gobiocypris rarus tumor suppressor protein p53 (p53) mRNA, partial cds.	784	mRNA	Gobiocypris rarus
	JQ613218	Eriocheir sinensis p53 protein (p53) mRNA, partial cds.	1179	mRNA	Eriocheir sinensis
	EU794049	Bacteriophage APSE-2, complete genome.	39867	DNA	Bacteriophage APSE-2
	EF564441	Paralichthys olivaceus p53 tumor supressor protein (p53) mRNA, complete cds.	1798	mRNA	Paralichthys olivaceus
	EF151927	Tympanoctomys barrerae p53 (p53) gene, exons 6, 7 and partial cds.	514	DNA	Tympanoctomys barrerae
	AJ783406	Spalax judaei mRNA for p53 protein.	1367	mRNA	Nannospalax judaei
	AH002919	Homo sapiens phosphoprotein p53 (p53) gene, complete cds.	4127	DNA	Homo sapiens
	AH007665	Homo sapiens tumor suppressor protein p53 (p53) gene, complete cds.	5192	DNA	Homo sapiens
	AY069096	Drosophila melanogaster GH11591 full length cDNA.	1579	mRNA	Drosophila melanogaster
	AF003949	Oryzias latipes tumor suppressor protein p53 (p53) mRNA, complete cds.	1701	mRNA	Oryzias latipes
	AF014018	Microtus arvalis isolate TK44790 tumor-suppressor p53 (p53) gene, partial cds.	788	DNA	Microtus arvalis
	AF014020	Microtus arvalis isolate TK44564 tumor-suppressor p53 (p53) gene, partial cds.	788	DNA	Microtus arvalis
	AF014022	Microtus rossiaemeridionalis isolate TK44577 tumor-suppressor p53 (p53) gene, partial cds.	788	DNA	Microtus levis
	AF014024	Microtus rossiaemeridionalis isolate TK44575 tumor-suppressor p53 (p53) gene, partial cds.	788	DNA	Microtus levis
	AF014026	Microtus arvalis isolate TK44739 tumor-suppressor p53 (p53) gene, partial cds.	788	DNA	Microtus arvalis
	AF014028	Microtus rossiaemeridionalis isolate TK44630 tumor-suppressor p53 (p53) gene, partial cds.	788	DNA	Microtus levis
	AF014030	Microtus rossiaemeridionalis isolate TK44823 tumor-suppressor p53 (p53) gene, partial cds.	788	DNA	Microtus levis
	AF014032	Microtus arvalis isolate TK44828 tumor-suppressor p53 (p53) gene, partial cds.	788	DNA	Microtus arvalis
	AF014034	Microtus rossiaemeridionalis isolate TK44621 tumor-suppressor p53 (p53) gene, partial cds.	788	DNA	Microtus levis
	AF014036	Microtus rossiaemeridionalis isolate TK44841 tumor-suppressor p53 (p53) gene, partial cds.	788	DNA	Microtus levis
Now loading

PAGE TOP

ARSA (Search Result) Help

Search Condition

Advanced Search Quick Search

Search Settings

Search Condition

Quick Search Advanced Search

Available Fields

Search Result

Facet

List of Entries