ARSA (Search Result) Help

Search Condition

Advanced Search Quick Search

Field Show examples Hide examples

Primary Accession Number

e.g.	Same as Quick Search
`AA000001`	`PrimaryAccessionNumber:AA000001` `pa:AA000001`
`AA00000*`	`pa:AA00000*`
`/AA00000[1-3]/`	`pa:/AA00000[1-3]/`
`AA000001 AA000002`	`pa:(AA000001 OR AA000002)`

Hide examples

Accession Number

e.g.	Same as Quick Search
`AA000001`	`AccessionNumber:AA000001` `an:AA000001`
`AA00000*`	`an:AA00000*`
`/AA00000[1-3]/`	`an:/AA00000[1-3]/`
`AA000001 AA000002`	`an:(AA000001 OR AA000002)`

Hide examples

Sequence Length

e.g.			Same as Quick Search
`400`	to	`500`	`SequenceLength:[400 TO 500]` `sl:[400 TO 500]`
	to	`500`	`sl:[* TO 500]`
`100`	to		`sl:[100 TO *]`
`450`	to	`450`	`sl:450`

Hide examples

Molecular Type

DNA RNA cRNA mRNA rRNA tRNA PRT

Same as Quick Search
`MolecularType:DNA` `mt:DNA`
`mt:(DNA OR RNA)`

Hide examples

Molecular Form

circular linear

Same as Quick Search
`MolecularForm:circular` `mf:circular`
`mf:(circular OR linear)`

Hide examples

Division

Same as Quick Search
`Division:BCT` `dv:BCT`
`dv:(BCT OR CON)`

Hide examples

Date

e.g.			Same as Quick Search
`20130101`	to	`20131231`	`Date:[20130101 TO 20131231]` `dt:[20130101 TO 20131231]`
	to	`20131231`	`dt:[* TO 20131231]`
`20130101`	to		`dt:[20130101 TO *]`
`20130401`	to	`20130401`	`dt:20130401`

Hide examples

Definition

e.g.	Same as Quick Search
`"catalase gene"`	`Definition:"catalase gene"` `df:"catalase gene"`
`"Homo sapiens cDNA, clone:ABC123, 3' end, expressed in brain"`	`df:"Homo sapiens cDNA, clone:ABC123, 3' end, expressed in brain"`
`/Homo sapiens cDNA, clone:[A-Z0-9]+, 3' end, expressed in brain/`	`df:/Homo sapiens cDNA, clone:[A-Z0-9]+, 3' end, expressed in brain/`

Hide examples

Keyword

e.g.	Same as Quick Search
`BARCODE`	`Keyword:BARCODE` `kw:BARCODE`
`HTGS_*`	`kw:HTGS_*`
`\(3'-EST\)`	`kw:\(3'-EST\)`
`"(3'-EST)"`	`kw:"(3'-EST)"`
`/[35]\'-EST/`	`kw:/[35]\'-EST/`
`/TPA\:(experimental\|reassembly)/`	`kw:/TPA\:(experimental\|reassembly)/`

Hide examples

Organism

e.g.	Same as Quick Search
`"Homo sapiens"`	`Organism:"Homo sapiens"` `og:"Homo sapiens"`
`"Mus musculus" "Rattus norvegicus"`	`og:("Mus musculus" OR "Rattus norvegicus")`

Hide examples

Lineage

e.g.	Same as Quick Search
`Vertebrata`	`Lineage:Vertebrata` `ln:Vertebrata`
`Vertebrata Insecta`	`ln:(Vertebrata OR Insecta)`

Hide examples

Reference Authors

e.g.	Same as Quick Search
`Mishima`	`ReferenceAuthor:Mishima` `ra:Mishima`
`Mishima Shizuoka`	`ra:(Mishima OR Shizuoka)`

Hide examples

Reference Title

e.g.	Same as Quick Search
`"human liver"`	`ReferenceTitle:"human liver"` `rt:"human liver"`
`"stomach cancer" "gastric cancer"`	`rt:("stomach cancer" OR "gastric cancer")`

Hide examples

Reference Journal

e.g.	Same as Quick Search
`"National Institute of Genetics"`	`ReferenceJournal:"National Institute of Genetics"` `rj:"National Institute of Genetics"`

Hide examples

Reference PubmedID

e.g.	Same as Quick Search
`1234567`	`ReferencePubmedID:1234567` `rp:1111111`
`[2222222 TO 3333333]`	`rp:[2222222 TO 3333333]`
`[* TO 3333333]`	`rp:[* TO 3333333]`
`[2222222 TO *]`	`rp:[2222222 TO *]`
`4444444`	`rp:4444444`
`5555555 6666666`	`rp:(5555555 OR 6666666)`

Hide examples

Comment

e.g.	Same as Quick Search
`"Human cDNA sequencing project"`	`Comment:"Human cDNA sequencing project"` `cm:"Human cDNA sequencing project"`

Hide examples

Features

Feature Key	Qualifier Name	Qualifier Value
	`/`	`=""`
more features

e.g.			Same as Quick Search
Feature Key	Qualifier Name	Qualifier Value	Same as Quick Search
		`taxon:9606`	`Feature:"taxon:9606"` `fe:"taxon:9606"`
`source`	`chromosome`	`12`	`FeatureQualifier:("source /chromosome=12" AND "source /clone_lib=lambda gt11 human liver cDNA (GeneTech. No.20)" AND "source /db_xref=taxon:9606" AND "CDS /codon_start=1" AND "CDS /translation=")`
`source`	`clone_lib`	`lambda gt11 human liver cDNA (GeneTech. No.20)`
`source`	`db_xref`	`taxon:9606`
`CDS`	`codon_start`	`1`
`CDS`	`translation`
`source`	`chromosome`	`12`	`fq:("source /chromosome=12" AND "source /clone_lib=lambda gt11 human liver cDNA (GeneTech. No.20)" AND "source /db_xref=taxon:9606" AND "CDS /codon_start=1" AND "CDS /translation=")`
`source`	`clone_lib`	`lambda gt11 human liver cDNA (GeneTech. No.20)`
`source`	`db_xref`	`taxon:9606`
`CDS`	`codon_start`	`1`
`CDS`	`translation`

Hide examples

All Text

e.g.	Same as Quick Search
`human`	`AllText:human` `at:human`

Hide examples

Combine Searches with

Search Condition

Quick Search Advanced Search

Available Fields

Field	Query Formats
Primary Accession Number	Search all wordsPrimaryAccessionNumber:(AB999999 AND AB999998 ...) Search any wordsPrimaryAccessionNumber:(AB999999 OR AB999999 ...) Regexp queryPrimaryAccessionNumber:/regexp/
Accession Number	Search all wordsAccessionNumber:(AB999999 AND AB888888 ...) Search any wordsAccessionNumber:(AB999999 OR AB888888 ...) Regexp queryAccessionNumber:/regexp/
Division	Search any divisionsDivision:(HUM OR PRI ...)
Sequence Length	Search rangingSequenceLength:[450 TO 500]
Molecular Type	Search any molecular typesMolecularType:(mRNA OR DNA ...)
Molecular Form	Search any molecular formsMolecularForm:(circular OR linear)
Date	Search rangingDate:[20090601 TO 20090701]
Definition	Search all wordsDefinition:(partial AND cds ...) Search any wordsDefinition:(partial OR cds ...) Regexp queryDefinition:/regexp/ Search exactly matchDefinition:"partial cds"
Comment	Search all wordsComment:(sequencing AND project ...) Search any wordsComment:(sequencing OR project ...) Regexp queryComment:/regexp/ Search exactly matchComment:"sequencing project"
Keyword	Search all wordsKeyword:(HTC AND HTC_FLI ...) Search any wordsKeyword:(HTC OR HTC_FLI ...) Regexp queryKeyword:/regexp/ Search exactly matchKeyword:"oligo capping"
Organism	Search all wordsOrganism:(Homo AND sapiens ...) Search any wordsOrganism:(Homo OR sapiens ...) Regexp queryOrganism:/regexp/ Search exactly matchOrganism:"Homo sapiens"
Lineage	Search all wordsLineage:(Eukaryota AND Metazoa ...) Search any wordsLineage:(Eukaryota OR Metazoa ...) Regexp queryLineage:/regexp/
Reference Author	Search all wordsReferenceAuthor:(Mishima AND Shizuoka ...) Search any wordsReferenceAuthor:(Mishima OR Shizuoka ...) Regexp queryReferenceAuthor:/regexp/ Search exactly matchReferenceAuthor:"Mishima,H."
Reference Title	Search all wordsReferenceTitle:(expressed AND liver ...) Search any wordsReferenceTitle:(expressed OR liver ...) Regexp queryReferenceTitle:/regexp/ Search exactly matchReferenceTitle:"expressed in human liver"
Reference Journal	Search all wordsReferenceJournal:(30-NOV-2008 AND Hanako ...) Search any wordsReferenceJournal:(30-NOV-2008 OR Hanako ...) Regexp queryReferenceJournal:/regexp/ Search exactly matchReferenceJournal:"Hanako Mishima"
Reference PubmedID	Search all wordsReferencePubmedID:(1111111 AND 1111112 ...) Search any wordsReferencePubmedID:(1111111 OR 1111112 ...) Regexp queryReferencePubmedID:/regexp/ Search rangingReferencePubmedID:[1111110 TO 1111119]
Feature	Search all wordsFeature:(GT200015 AND gt11 ...) Search any wordsFeature:(GT200015 OR gt11 ...) Search exactly matchFeature:"gene=\"GAPD\""
Feature Qualifier	Search one feature-qualifierFeatureQualifier:/source \/clone=GT200015/ Search all feature-qualifiersFeatureQualifier:(/source \/clone=GT200015/ AND /CDS \/gene=GAPD/ ...)
All Text	Search with field_name 'AllText'AllText:any_formats

LOCUS	AB000000 450 bp mRNA linear HUM 01-JUN-2009
DEFINITION	Homo sapiens GAPD mRNA for glyceraldehyde-3-phosphate dehydrogenase, partial cds.
ACCESSION	AB999999 AB888888 AB777777
VERSION	AB000000.1
KEYWORDS	HTC; HTC_FLI; oligo capping.
SOURCE	Homo sapiens (human)
ORGANISM	Homo sapiens
	Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
	Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
	Catarrhini; Hominidae; Homo.
REFERENCE	1 (bases 1 to 450)
AUTHORS	Mishima,H. and Shizuoka,T.
TITLE	Direct Submission
JOURNAL	Submitted (30-NOV-2008) to the DDBJ/EMBL/GenBank databases. Contact:Hanako Mishima National Institute of Genetics, DNA Data Bank of Japan; Yata 1111, Mishima, Shizuoka 411-8540, Japan
PUBMED	1111111
REFERENCE	2
AUTHORS	Mishima,H., Shizuoka,T. and Fuji,I.
TITLE	Glyceraldehyde-3-phosphate dehydrogenase expressed in human liver
JOURNAL	Unpublished (2009)
COMMENT	Human cDNA sequencing project.
FEATURES		Location/Qualifiers
source		1..450
source		/chromosome="12"
source		/clone="GT200015"
source		/clone_lib="lambda gt11 human liver cDNA (GeneTech. No.20)"
source		/db_xref="taxon:9606"
source		/map="12p13"
source		/mol_type="mRNA"
source		/organism="Homo sapiens"
source		/tissue_type="liver"
CDS		86..>450
CDS		/codon_start=1
CDS		/gene="GAPD"
CDS		/product="glyceraldehyde-3-phosphate dehydrogenase"
CDS		/protein_id="BAA12345.1"
CDS		/transl_table=1
CDS		/translation="MAKIKIGINGFGRIGRLVARVALQSDDVELVAVNDPFITTDYMT YMFKYDTVHGQWKHHEVKVKDSKTLLFGEKEVTVFGCRNPKEIPWGETSAEFVVEYTG VFTDKDKAVAQLKGGAKKV"
BASE COUNT 102 a 119 c 131 g 98 t
ORIGIN
1 cccacgcgtc cggtcgcatc gcacttgtag ctctcgaccc ccgcatctca tccctcctct
61 cgcttagttc agatcgaaat cgcaaatggc gaagattaag atcgggatca atgggttcgg
121 gaggatcggg aggctcgtgg ccagggtggc cctgcagagc gacgacgtcg agctcgtcgc
181 cgtcaacgac cccttcatca ccaccgacta catgacatac atgttcaagt atgacactgt
241 gcacggccag tggaagcatc atgaggttaa ggtgaaggac tccaagaccc ttctcttcgg
301 tgagaaggag gtcaccgtgt tcggctgcag gaaccctaag gagatcccat ggggtgagac
361 tagcgctgag tttgttgtgg agtacactgg tgttttcact gacaaggaca aggccgttgc
421 tcaacttaag ggtggtgcta agaaggtctg
//

Search Result

Facet

List of Entries

1 - entries / Number of founds: 7239362 FlatFile XML Fasta

	PrimaryAccessionNumber	Definition	SequenceLength	MolecularType	Organism
	M26641	Human transferrin.	183	mRNA	Homo sapiens
	M73258	Human cellular DNA/Human papillomavirus proviral DNA.	6042	DNA	Human papillomavirus
	X16162	Human DNA homologous to human telomeric sequence.	973	DNA	Homo sapiens
	FM210541	Human Adenovirus 24 fibershaft.	441	DNA	Human adenovirus 24
	FM210549	Human Adenovirus 38 fibershaft.	441	DNA	Human adenovirus 38
	FM210557	Human Adenovirus 51 fibershaft.	443	DNA	Human adenovirus 51
	K00208	Human Gly-tRNA-GCC.	74	tRNA	Homo sapiens
	K00255	Human Val-tRNA-1a.	76	tRNA	Homo sapiens
	E00751	JP 1986063699-A/1: human.	898	RNA	unidentified
	U18666	Human Stat1 gene, exon.	245	DNA	Homo sapiens
	U38614	Human mariner transposon humar1g2.	1706	DNA	Homo sapiens
	U53011	Human microsatellite marker sAVA2.	193	DNA	Homo sapiens
	U53019	Human microsatellite marker sAVA3.	267	DNA	Homo sapiens
	X05199	Human mRNA for plasminogen.	2732	mRNA	Homo sapiens
	X05236	Human fibroblast mRNA for aldolase A.	1440	mRNA	Homo sapiens
	X06985	Human mRNA for heme oxygenase.	1550	mRNA	Homo sapiens
	X06994	Human mRNA for cytochrome c1.	1173	mRNA	Homo sapiens
	X07696	Human mRNA for cytokeratin 15.	1709	mRNA	Homo sapiens
	X07743	Human mRNA for pleckstrin (P47).	2745	mRNA	Homo sapiens
	X12811	Human 5S DNA.	2231	DNA	Homo sapiens
	X12881	Human mRNA for cytokeratin 18.	1407	mRNA	Homo sapiens
	X13712	Human HLBP32 pseudogene.	1019	DNA	Homo sapiens
	X13907	Human calmodulin pseudogene.	1099	DNA	Homo sapiens
	X14640	Human mRNA for keratin 13.	1691	mRNA	Homo sapiens
	X15014	Human RAL A gene.	621	mRNA	Homo sapiens
	X16612	Human gene for H1 RNA.	1057	DNA	Homo sapiens
	X16706	Human fra-2 mRNA.	1007	mRNA	Homo sapiens
	X17094	Human fur mRNA for furin.	4180	mRNA	Homo sapiens
	X53154	Human gene for desmin.	3284	DNA	Homo sapiens
	X54108	Human satellite III DNA.	1366	DNA	Homo sapiens
Now loading

PAGE TOP

ARSA (Search Result) Help

Search Condition

Advanced Search Quick Search

Search Settings

Search Condition

Quick Search Advanced Search

Available Fields

Search Result

Facet

List of Entries