AccessionTitle or Alias
ERP012886Ammonia oxidizing microorganisms are an important source of nitrous oxide (N2O) in aquatic environments, but the impact that acidification has on the rate and mechanism of N2O production by these organisms is not well understood. Here we present evidence from 15N-tracer incubations that acidification (from pH 7.54 to 7.20) significantly enhances N2O production by the ammonia oxidizer community in the shallow hypolimnion (17 m) of Lake Lugano in southern Switzerland. This community is dominated by the ammonia oxidizing bacteria of the genus Nitrosospira. Although ammonia oxidation rates were not significantly different among the pH treatments, the pH reduction did enhance the yield, or the ratio of N2O relative to NOx- (nitrite + nitrate) produced by ammonia oxidizers, from 2.6 × 10-5 to 8.8 × 10-5 mol N-N2O/mol N-NOx- at an O2 concentration of 290 µM, and from 5.7 × 10-5 to 12.1 × 10-5 mol N-N2O/mol N-NOx- at an O2 concentration of 70 µM. The increases were due at least in part to enhanced incorporation of N derived from exogenous NO2- into N2O. Incorporation of N from this exogenous NO2- is consistent with hybrid N2O formation, where the N2O produced contains one ammonia- (NH3-) derived N atom and one nitrite- (NO2-) derived N atom but it is not consistent with nitrifier denitrification (enzymatic reduction of 2 NO2- to N2O). In all incubations, most of the N incorporated into N2O appears to have been derived from NH3 rather than exogenous NO2-. We also present evidence of hybrid N2O formation during similar incubations of seawater (at its unaltered pH) from 200 m depth off the coast of Namibia, a coastal upwelling zone and known hotspot of N2O production whose ammonia oxidizer community is dominated by archaea.
ERP012887Bacterial 16s Amplicon Sequencing of the Atlantic Ocean
ERP012888Wastewater metagenomics.
ERP012889Airway microbiota in severe asthma and relationship to asthma clusters and severity
ERP01289016S rRNA genes from benthic Antarctic sediments
ERP01289118S rRNA genes from benthic Antarctic sediments
ERP012894A Universal Microbial Clock for Estimating the Postmortem Interval Metcalf Fly Data
ERP012895Recombination generates sequence diversity among balancer chromosomes in Drosophila melanogaster
ERP012896The hidden complexity of Mendelian traits across yeast natural populations
ERP012898Chromatin Dynamics during DNA Replication
ERP012899Whole genome resequencing of extreme phenotypes in collared flycatchers highlights the difficulty of detecting quantitative trait loci in natural populations
ERP012900Whole genome sequences of the 1st WHO International Repository for Transfusion Relevant Bacteria Strains
ERP012901Olsenella massiliensis genome
ERP012902Actinomyces ihumii genome
ERP012903Vitreoscilla massiliensis genome
ERP012904SPI-1 transcription factor ChIP-Seq
ERP012905Micromassilia timonensis genome
ERP012906Staphylococcus capitis CR08 strain sequencing
ERP012907Staphylococcus capitis CR06 strain sequencing
ERP012908Assembly of a 5300-year-old Helicobacter pylori genome from the intestine content of the tyrollean glacier mummy
ERP012909The human gut microbiome in ADHD
ERP012910Transcriptome sequencing of three tissues and ten taxa related to the house mouse Mus musculus.
ERP012911Whole Genome Sequencing of E. coli O157
ERP012912RNA-Seq data of 16 strains of saccharomyces cerevisiae produced after knockout of all combination of HIS3, LEU2, URA3 and MET15 genes
ERP012913Transcriptomic analysis of Anopheles stephensi salivary glands during Plasmodium berghei infection
ERP012914Transcriptional profiling of HAP1 kinase-knockout cells upon stimulation with polypeptides and small molecules
ERP012915Analysis of the developmental transcriptome of the brackish water amphipod Gammarus chevreuxi using Illumina sequencing.
ERP012916The intestinal eukaryotic virome in healthy and diarrhoeic neonatal piglets
ERP012917Genome sequencing of a type strain 41 of Carboxydocella thermautotrophica, anaerobic, thermophilic, CO-utilizing autotrophic bacterium, isolated from a terrestrial hot spring at the Geyser valley, Kamchatka Peninsula, Russia.
ERP012918Genome sequencing of a C. thermautotrophica strain 019, coupling carbon monoxide oxidation and Fe(III) minerals transformation, isolated from a core sample taken at a thermal field at Uzon caldera, Kamchatka Peninsula, Russia.
ERP012919Transcriptome dynamics of the Camellia sinensis in response to continuous salinity stress and drought stress
ERP012921Exome capture of individuals from a Triticum aestivum cv Cadenza TILLING population
ERP012922Available upon publication
ERP012923DNA Methylation Assessed by SMRT Sequencing Is Linked to Mutations in Neisseria meningitidis Isolates
ERP012924Transcriptome profiling using RNA-seq to unravel the aetiology of medulloblastoma
ERP012926Temporal stability of the oral microbiota: A longitudinal study of the dental, tongue, and salivary bacterial consortia
ERP012927Biogeography of bacterioplankton communities in freshwater boreal ecosystems
ERP012928Impact of freeze-drying on milk oligosaccharide content and marker gene bacterial community profiles in infant fecal samples
ERP012929Towards personalized nutrition by prediction of glycemic responses
ERP012930Transcriptome sequencing of three tissues and ten taxa related to the house mouse Mus musculus
ERP012932Bacterial community profiling of carbonated raw milk by next generation sequencing of 16S rRNA gene amplicons
ERP012933Genome of Mus spretus
ERP012935microRNA profiling by high-throughput sequencing in the substantia nigra and striatum of Multiple System Atrophy (MSA) transgenic mice and wild type controls
ERP012937Phylogenetic and ecological factors impact the gut microbiota of two Neotropical primate species
ERP01293810 Willow genotypes transcriptomics in contaminated soil
ERP012939Transcriptome profiling of cells depleted of hnRNPC, Upf1, or co-depleted of hnRNPC and Upf1.
ERP012940Relative humidity influences microbial communities
ERP012941Prospective whole genome sequencing for national surveillance of Listeria monocytogenes in Australia
ERP012942Draft genome sequence of Paracoccus aminovorans HPD-2, a high molecular weight polycyclic aromatic hydrocarbon-degrading bacterium
ERP012943Arabidopsis thaliana culture collections of leaf- and root-associated bacteria (Natural Communities 16S rRNA data)
ERP012947De novo assembly of Dekkera bruxellensis: a multi technology approach using short and long-read sequencing and optical mapping
ERP012948RNA targets of FASTKD2 in Human HEK293 cells
ERP012949Novel immunomodulatory flagellin-like protein FlaC in Campylobacter jejuni and other Campylobacterales
ERP012950Levan degradation by fecal microbiota
ERP012951Knuuttila et al. Castration induces up-regulation of intratumoral androgen biosynthesis and androgen receptor expression in an orthotopic VCaP human prostate cancer xenograft model. Am J Pathol. 2014 Aug;184(8):2163-73. doi: 10.1016/j.ajpath.2014.04.010. Epub 2014 Jun 17.
ERP012952Zygosaccharomyces bailii IST302 genome sequencing
ERP012956Genome assembly and annotation of passerine Salmonella Typhimurium
ERP012957Sequence data for passerine Salmonella Typhimurium
ERP012958Transcription profiling of cytoplasmic and nuclear RNA of hnRNPC depleted cells and ER-Raf1 activated HR1 cells
ERP012959Nasal microbiota composition of healthy piglets
ERP012960Personal Genome Project - Data Conversion from Complete Genomics format to standard SAM/BAM format, and other standard formats
ERP012961This project converts published academic data in Complete Genomics format to standard SAM/BAM and other standard formats for analysis with open source Bioinformatics tools and display in genome browsers.
ERP012962Whole genome sequencing of Klebsiella sp. D5A
ERP012963Rumen Microbiome study
ERP012965la la lal lalallalla
ERP012966Ion Torrent based multi-gene sequencing as a reliable diagnostic assay for the detection of somatic mutations in tumors using minimal DNA amounts from FFPE material - validation study
ERP012967Environmental DNA analyses of North Sea using 18 S fragment
ERP012968Environmental DNA analyses of North Sea using a COI fragment
ERP012969soil fungal and bacterial community sequences from the 2011 Ossekampen experiment
ERP012970Arabidopsis thaliana culture collections of leaf- and root-associated bacteria (Synthetic Communities 16S rRNA data)
ERP012971Arabidopsis thaliana culture collections of leaf- and root-associated bacteria (WGS raw reads)
ERP012972Microbial metagenome sequencing from marine sponges (Spongia sp.), seawater and sediments
ERP012973Bacterial vaginosis
ERP012976Zebrafish Genome Assembly WGS32
ERP012977Phylogenetic analysis of higher-level relationships within Hydroidolina (Cnidaria: Hydrozoa) using mitochondrial genome data and insight into their mitochondrial transcription
ERP012979Comprehensive analysis of the transcriptional and mutational landscape of follicular and papillary thyroid cancers
ERP013021Genome-wide surveys of nucleotide variation using single-digest RAD-Seq Illumina libraries in sixty specimens of yellow-billed pintail, cinnamon teal, and speckled teal specimens collected from high- and low-altitude localities in the Andes
ERP013022RNA-seq datasets from hippocampus samples collected from 4 week old control and PRRSV infected piglets.
ERP013023Clostridium beijerinckii DSM6423 genomic sequence and physical map (chromosome, plasmid and bacteriophage)
ERP013024WGS of Staphylococcus aureus from the African-German-StaphNetwork
ERP013026An. gambiae small RNA 48h post P. berghei infection
ERP013027Inhibition factors in biofilm N removal systems treating wastes generated by amine based CO2 capture
ERP013029Metagenome-based metabolic reconstruction reveals the ecophysiological function of Epsilonproteobacteria in a hydrocarbon-contaminated sulfidic aquifer
ERP013030Total RNA from abdomen and head of L. boulardi females and alignment of the RNA-Seq reads against the genome of L. boulardi Toti-like Virus.
ERP013031Soil metagenome sampled from a chitin-amended agricultural field
ERP013032Next generation semiconductor based sequencing of bitter taste receptor genes in different pig breeds and populations and association study of identified polymorphisms using a DNA pooling strategy
ERP013034Two Vibrio cholerae isolates from the 2009-2011 cholera outbreak in Papua New Guinea have been sequenced. These two isolates are representative of near clonal set of isolates obtained during the outbreak. The genomes were sequenced using the WGS strategy. Read sets were produced on the Illumina sequencing platform (100b, PE). Genome read coverage is ~100x.
ERP013036EccDNA preparation from biological B02-B05 samples. Each sample from 1x10^6 cells.
ERP013040Identification of the RED gene in sugar beet using deep sequencing
ERP013041Explore the effect of grass sickness on the equine faecal microbiome.
ERP013042RNA-seq analysis to investigate the downstream genes of EXB1 in Arabidopsis
ERP013043mouse Sperm DNA OxiDIP sequencing
ERP013045Genome sequencing of smooth and rough Mycobacterium canettii strains
ERP013047eIF4A3 - Modified iCLIP
ERP013049Cell-free DNA sequencing of castration-resistant prostate cancer (custom AR panel)
ERP013050Soil bacterial community shifts driven by restoration time and steppe types in the degraded steppe of Inner Mongolia
ERP013051miBC: the mouse intestinal Bacterial Collection
ERP013052Genome Assembly of Staphylococcus epidermidis Tu3298
ERP013053Bundle sheath and mesophyll cell RNAseq profiling
ERP013054Whole genome sequences for M.tuberculosis isolates from the TDR strain bank
ERP013055RNAseq study (root and shoot) of Holcus lanatus ecotypes selected from two widely contrasting habitats, acid bog (pH 3.5) or limestone quarry spoil (pH 7.5)
ERP013056Gracilibacillus massiliensis genome
ERP013057Historical "Special Listeria Culture Collection" whole genome sequencing
ERP013058A starting natural community of AccD genes, and a wild-type AccD gene was cloned and altered. Each were used in an artificial selection assay and sequenced via a 454 GS FLX Titanium system.
ERP013059Cell-free DNA sequencing of castration-resistant prostate cancer (custom Ion AmpliSeq panel)
ERP013060Genomic alterations in cell-free DNA and enzalutamide resistance in castration-resistant prostate cancer
ERP013061Marine Microbes pilot study
ERP013063The human skin microbiome in ichthyosis vulgaris
ERP013064Insights into RNA Biology from an Atlas of Mammalian mRNA-Binding Proteins
ERP013065Microbial composition of purified waters and implications for regrowth control in municipal water systems
ERP013066Adaptive differentiation in natural populations of a lichen-forming fungus along an elevation cline
ERP013067Simulated glass water heaters were studied for more than two years with various factors, including added materials, temperatures, and water quality manipulated.
ERP013068Human BAT/WAT under Cold Exposure/Thermoneutrality
ERP013091Identification of a new Pseudomonas aeruginosa mu-like bacteriophages
ERP013092Intestinal microbiome is related to lifetime antibiotic use in Finnish pre-school children
ERP013093Brain meta-transcriptomics from harbor seals to infer the role of the microbiome and virome in a stranding event
ERP013094Real-time species typing and analysis of antibiotic resistance potential using Nanopore MinION sequencing
ERP013096Legionella saoudiensis genome
ERP013097metagenomic amplicon sequensing from soils for novel natural products (16S_NRPS_PKS)
ERP013101MARC phase2a
ERP013102Dietary intervention with a probiotic Bifidobacterium modulates dominant bacterial taxa in an enterotype-dependent fashion and normalizes butyrate levels in the gut of healthy adults
ERP013103This archive contains raw reads produced by the surveillance & epidemiology unit at the Laboratoire National de Santé, mainly on foodborne infections
ERP013105Characterizing postnatal co-development of the gut microbiota and mucosal IgA responses in healthy twin pairs and a gnotobiotic mouse model
ERP013106Evidence of natural hybridization in Brazilian wild lineages of Saccharomyces cerevisiae
ERP013107Metagenomic analysis of microbial CpG methylation in Delaware estuarine riverbank sediment
ERP013108Soil bacterila responses to long-term fertilizer application
ERP013109A diverse array of bacteria that inhabit the rhizosphere and different plant organs play a crucial role in plant health and growth.
ERP013110NG-Tax, a highly accurate and validated pipeline for analysis of 16S rRNA amplicons from complex biomes
ERP013111Aiming for ultra-long read lengths in Drosophila melanogaster to facilitate genome assembly and structural variation studies and tool development. If you use this data, please cite: Sequencing ultra-long DNA molecules with the Oxford Nanopore MinION John M Urban, Jacob Bliss, Charles E Lawrence, Susan A Gerbi doi:
ERP013112Transposable elements (TEs) sequence capture
ERP013113Genome sequence for a Neisseria sp. isolated from a wild house mouse
ERP013114The Arabidopsis thaliana mobilome
ERP013115Effect of brownification on the composition of lake plankton communities, a mesocosm experiment
ERP013116Adding latter
ERP01311816S rRNA pyrotag study of the microbial community of the area of Caffaro
ERP013119RNAseq of coding RNA in the liver, spleen, kidney, abdominal muscle and gonadal adipose tissue of knock out mice and wild type controls as part of the KOMP2 project.
ERP013120Candidatus Kryptonium thompsoni JGI-8
ERP013121Candidatus Kryptonium thompsoni JGI-13
ERP013122Candidatus Kryptonium thompsoni JGI-7
ERP013123Candidatus Kryptonium originalis JGI-6
ERP013124Candidatus Kryptonium thompsoni JGI-12
ERP013125Candidatus Kryptonium thompsoni JGI-15
ERP013126Candidatus Kryptonium thompsoni JGI-16
ERP013127Candidatus Kryptonium thompsoni JGI-10
ERP013128Candidatus Kryptobacter tengchongensis JGI-20
ERP013129Candidatus Kryptonium originalis JGI-14
ERP013130Candidatus Kryptobacter tengchongensis JGI-25
ERP013131Candidatus Kryptonium thompsoni JGI-11
ERP013132Candidatus Kryptobacter tengchongensis JGI-22
ERP013133Candidatus Kryptonium originalis JGI-17
ERP013134Candidatus Chrysopegis kryptomonas JGI-23
ERP013135Candidatus Kryptonium thompsoni JGI-5
ERP013136Candidatus Kryptobacter tengchongensis JGI-24
ERP013137Candidatus Kryptonium thompsoni JGI-9
ERP013138De novo Assembly of Human Herpes Virus type 1 (HHV-1) Genome, Mining of Non-canonical Structures and Detection of Novel Drug-resistance Mutations using Short- and Long-read Next Generation Sequencing Technologies.
ERP013139Draft Genome Sequence of Thauera sp. DTG from a denitrifying quinoline degrading microbial consortium
ERP013142Transcriptome analysis of the Root, rhizosphere and soil of Oilseed rape lines that showed, high or low malate exudation.
ERP013144First report of lukM-positive livestock-associated methicillin-resistant Staphylococcus aureus CC30 from fattening pigs in Northern Ireland
ERP013145RNA-Seq analysis of LT-HSC isolated from fetal liver and adult bone marrow.
ERP013146Genome-wide profiling of Alternative polyadenylation sites in mouse female germline stem cells
ERP013147Effects of fumigation-derived products on soil microbial community
ERP013149Tomato leaf curl New Delhi virus (ToLCNDV) ssDNA plant begomovirus (Family geminiviridae) isolated from Potato in Pakistan.
ERP013150Exome capture and sequencing of barley lines to fine map, on 7HL, a powdery resistance from a Spanish landrace.
ERP013151Trim28 Haploinsufficiency Triggers Bi-stable Epigenetic Obesity
ERP013152Targeted 16S rRNA gene and ITS1 sequencing to determine bacterial and fungal communities of snow containing Saharan sand, of snow that fell before and after the dust deposition event and of Alpine soil after snow melt.
ERP013153Genomic resources for wild type populations of the house mouse (Mus musculus) and its close relative Mus spretus
ERP013156Biogeography of the stomach microbiota in humans, mice and gerbils indicates selective enrichment and depletion of specific bacterial taxa
ERP013157HipSci imputed whole exome sequencing data for healthy volunteers
ERP013158HipSci whole exome sequencing data for healthy volunteers
ERP013159TCRa sequencing of EF4.1 T cells
ERP013160Analysis of single CD41 cell transcriptomes from Zebrafish
ERP013161HipSci imputed genotyping array data for healthy volunteers
ERP013162HipSci genotyping array data for healthy volunteers
ERP013164The Pig’s other genome: a reference gene catalogue of the gut microbiome
ERP013165The Pig’s other genome: a reference gene catalogue of the gut microbiome
ERP013166Epigenetic profiling of H3K4me3 reveals Herbal Medicine Jinfukang-induced epigenetic alteration is involved in anti-Lung Cancer activity
ERP013167This study was established to test our new malolactic bacteria L. plantarum (called NoVA™) in different grape varieties such as Airén (white grape variety).
ERP013168In frame of the IBSC The Genome Analysis Centre (TGAC) sequenced BACs, that constitute the MTP of barley chromosome 2H using Illumina 2000 chemistry.
ERP013169Whole genome sequencing of Neisseria isolates collected in Africa
ERP013170Bacteriophage Genome Sequencing
ERP013171Bacteriophage VCM1b
ERP013172Bacteriophage HC15b2
ERP013173Different gastric microbiota compositions in two human populations with high and low gastric cancer risk in Colombia
ERP013174Apical periodontitis
ERP013175Pol III ChIP-seq of liver cancer cell lines
ERP013176Costa Rica Margin Subseafloor Microbial Community Analysis
ERP013177Sequence variation in nuclear ribosomal SSU, ITS and LSU regions of Rhizophagus irregularis and Gigaspora margarita is high and isolate-dependent
ERP013178Metabarcoding reveals strong spatial structure and temporal turnover of zooplankton communities among marine and freshwater ports
ERP013179High quality draft genome assembly of Janthinobacterium sp. strain CG23_2 isolated from an Antarctic supraglacial stream.
ERP013180Quasispecies composition and diversity do not reveal any predictors for chronic classical swine fever virus infection
ERP013181Targeted resequencing of the remaining allele in the 22q11 region for 127 patients
ERP013182Genomic studies of phylogeny, population structure, genetic diversity, speciation, gene flow, demography and selection in Heliconius butterflies.
ERP013183Triticum aestivum CS42 whole genome assembly
ERP013184Determining the transcriptome of an AdeRS deletion mutant in Acinetobacter baumannii AYE
ERP013185Acrocephalus schoenobaenus MHC class I ultra-deep sequencing genotyping
ERP013186Whole genome sequencing of 470 isolates of Peptoclostridium difficile.
ERP013187Escherichia coli has been recently described the hypermucoviscous phenotype. Phenomenon analogous to those produced by Klebsiella pneumonia strains known to invade the liver. Likewise, this bacterial species has been described with resistance to colitin mediated by the mcr-1 gene, which is found in plasmids.
ERP013188Whole genome sequencing demonstrates limited transmission within identified Mycobacterium tuberculosis clusters in New South Wales, Australia
ERP013189Discrete Community Assembly Within Hypersaline Paleolake Sediments Along a Geological Transect in the Great Salt Lake Desert, Utah
ERP013190Biogeochemical Hunting: Investigating naturally occurring perchlorate in the Pilot Valley Basin, Utah
ERP013191RNA-seq of liver tissue and liver cancer cell lines
ERP013194RNA-seq on SIP+-treated mating type minus cultures of Seminavis robusta
ERP013195Hot spring microbial communities from Great Boiling Spring, Nevada - cellulolytic enrichment S 77C Metagenome
ERP013196Hot spring sediment from Jinze in Tengchong, China Metagenome
ERP013197Hot spring sediment from Gongxiaoshe in Tengchong, China Metagenome
ERP013198Hot spring microbial communities from Dewar Creek, Canada Metagenome
ERP013199Oral samples as non-invasive proxies for assessing the composition of the rumen microbial community
ERP013200Comparison of next generation sequencing technologies for the comprehensive assessment of full-length hepatitis C viral genomes
ERP013203Complete re-sequencing of a 2Mb topological domain encompassing FTO/IRXB genes identifies a novel obesity associated region upstream of IRX5
ERP013205Ertapenem resistance due to G63V replacement in OmpR
ERP013206Whole transcriptome profiling of Esophageal adenocarcinoma and Barrett's
ERP013207In frame of the IBSC The Genome Analysis Centre (TGAC) sequenced BACs, that constitute the MTP of barley chromosome 2H using MatePair Pool Sequencing.
ERP013208Survey of soil microbial diversity in permafrost soil and the surrounding active layers at the long-term study site Muot da Barba Peider using Illumina Miseq amplicon sequencing of ribosomal markers.
ERP013209Integrated Genomics Approach to Identify Biologically Relevant Alterations in Fewer Samples.
ERP013210RNA-seq of blood and adipose tissue from mice infected with Trypanosoma brucei
ERP013211An. gambiae long RNA paired end sequencing 48h post P. berghei infection after J2 antibody pull down
ERP013212Long-read de novo assembly of the Plasmodium falciparum genome using single molecule real-time sequencing
ERP013213A metagenomics approach to evaluate the impact of Ascophyllum nodosum and Laminaria digitata on the rumen function
ERP013214WES sequencing of 35 hepatoblastoma tumors and controls
ERP013215Expression profiling of budding cells in colorectal cancer suggests an EMT-like phenotype and molecular subtype switching
ERP013217RNA sequencing data of bone marrow endothelial cell subpopulations type H, type E and type L
ERP013218Jun-mediated changes in cell adhesion contribute to embryonic stem cell exit from ground state pluripotency
ERP013222Marine microbial communities isolated from the Black Sea surface water along the coast of Odessa region
ERP013224RNA-seq transcriptome profiling in the Fagus sylvatica trunk
ERP013225Human Exon 1.0 ST Affymetrix array data from SHSY-5Y cells
ERP013226Human Exon 1.0 ST Affymetrix array data from SHSY-5Y cells
ERP013227Mapping the sex determination locus in the hapuku (Polyprion oxygeneios) using ddRAD sequencing
ERP013228ONT MinION sequencing of ERCC and HEK293 cDNA
ERP013231pyrosequencing analysis for compost-amended hypoxic landfill reactors
ERP013232attempt to check the process of submisstion
ERP013233The mitochondrial genome of Vespertilio murinus was assembled from short Illumina reads
ERP013234Rice perception of symbiotic arbuscular mychorrhizal fungi requires the karrikin receptor complex
ERP013235Sequencing of Yellowfin tuna microbiota
ERP013237Raw 454-pyrosequencing data of bacterial 16S rRNA gene amplicons of a changing bacterial community composition due to decreasing trace element concentrations
ERP013238Determining the transcriptome of an AdeB deletion mutant in Acinetobacter baumannii AYE
ERP013239Enrichment from groundwater treating sand filters
ERP013240Characterization of the human gut mycobiota of healthy subjects through 454 pyrosequencing of the fungal ITS1 rDNA region
ERP013242Ancient gene flow from modern humans into Siberian Neanderthals
ERP013244Sequencing of mreC deletion mutants of Staphylococcus aureus SH1000
ERP013246Frankia sp. DSM 45899
ERP013247Shotgun Human Cadaver Gut Microbiome
ERP013249Draft genome sequence of Corynebacterium variabile Mu292
ERP013250Whole genome sequence of a canine breed
ERP01325116S metagenomic of bovine rumen during feeding grass on Brachiaria sp
ERP013253Demosponge Halisarca dujardini - transcriptome sequencing
ERP013254The genetic basis of high altitude adaptation in house mice
ERP013255Dysbiosis and NKG2D system activation in corpus-dominant lymphocytic gastritis
ERP01325616S rDNA isolated and amplidfied from stools and colonic mucosal biopsies of patients with antibiotic associated apoptotic enterocolitis.
ERP013257The taxonomic composition of the donor intestinal microbiota is a major factor influencing the efficacy of faecal microbiota transplantation in therapy refractory ulcerative colitis.
ERP013258Reoccurrence of infection by Cryptococcus neoformans var. grubii (Cng) after treatment, which can occur either via relapse of the original infection of re-infection of a different strain, is problematic in sub-Saharan Africa.
ERP013259The impact of Hsp90 upon the Candida albicans transcriptome during heat shock
ERP013260Transcriptional landscape of human tissue lymphocytes unveils uniqueness of tumor-infiltrating T regulatory cells
ERP013261The fecal microbiota and disease activity in Crohn's disease
ERP013262Gut microbiota of Juvenile Idiopathic arthritis
ERP013263Annotation of Fusobacterium
ERP013264Early farmers from across Europe descended directly from Neolithic Aegeans
ERP013265Comparison of transcriptomic contents of a wild type Staphylococcus strain (HG001) and the spdC deleted derivative by RNAseq analysis.
ERP013267Whole genome sequencing and analysis of Neisseria isolates from The UK (retroscreen)
ERP013268Prenatal arsenic exposure and intestinal microbiota in Bangladeshi children
ERP013269Prenatal arsenic exposure and intestinal microbiota in Bangladeshi children
ERP013270Homeostatic Control of Innate Immune Lung Inflammation by Vici Syndrome Gene Epg5 and Additional Autophagy Genes Promotes Influenza Pathogenesis
ERP013271Plasmodium falciparum sequencing project
ERP013273The Genome and Genetics of a High Oxidative Stress Tolerant Serratia sp. LCN16 isolated from the plant parasitic nematode Bursaphelenchus xylophilus
ERP013274Blautia massiliensis genome
ERP013276Identifying likely transmission pathways within a 10-year community outbreak of tuberculosis by high-depth whole genome sequencing
ERP013277Yersinia pestis genome
ERP013278Mouse genotypes drive the liver and adrenal gland clocks - whole exome sequencing of two mouse strains.
ERP013279Anaerococcus rubiinfantis genome
ERP013280Bittarella massiliensis genome
ERP013281Fournierella massiliensis genome
ERP013282RNA transcription in regions of the midgut of Drosophila melanogaster larvae having different pH
ERP013283Effects of antimicrobial peptide expression on the root microbiota of field-grown Nicotiana attenuata plants
ERP013284Hugonella massiliensis genome
ERP013287Clostridium difficile PCR ribotype 017 global strains
ERP013288Ecological succession reveals signatures of marine–terrestrial transition in salt marsh fungal communities
ERP013289Nitrogen utilization by marine prokaryotes revealed using stable isotope probing coupled with tag sequencing (Tag-SIP)
ERP013290300 soil samples in East China, 16s rRNA gene, Miseq
ERP013291The aim was to explore the possible link between CH4 production and liquid/solid associated microbe.
ERP013292Paenibacillus rubiinfantis genome
ERP013293Adalia bipunctata transcriptome
ERP013294Paenibacillus senegalomassiliensis genome
ERP013295A total of 95 APEC isolates have been fully sequenced and annotated
ERP013296Coccinella septempunctata transcriptome
ERP013297Ruminococcus phoceensis genome
ERP013298Total and nuclear RNA-seq of whole-embryo and mesodermal cells
ERP013299Sanguibacteroides massiliensis genome
ERP013300Pooled sequencing GWAS on female abdominal pigmentation in Drosophila melanogaster across different populations
ERP013301Bacterial antisense RNAs are mainly the product of transcriptional noise
ERP013302Evolutionary signals of selection on cognition from the great tit genome and methylome
ERP013303miR-515 and migration in cancer
ERP013304Blue Rubber Bleb Nevus (BRBN) Syndrome is caused by Somatic Double-Mutations in TEK
ERP013305Comparison of High Resolution Viruelnce Allelic Profiling (HReVAP) typing with Multilocus Sequence Typing and Whole Genome SNPs analysis for typing VTEC strains
ERP013306APEC strains from Europe
ERP013310Continuous CRISPR spacer acquisition in STSV2-infected crenarchaeon Sulfolobus islandicus REY15A over a 6-day period
ERP013312A long noncoding RNA lincRNA-EPS acts as a transcriptional brake to restrain inflammation
ERP013313Defining the microbial response to colitis through integrated host and microbiome profiling: Replication data set
ERP013314Olfaction in the ovipositor of Manduca sexta
ERP013315RNA-Sequencing of wild type and UCP1-null beige adipose tissue
ERP013316Identification of E93 binding sites in Drosophila melanogaster
ERP013318Cervical cerclage using braided suture material for the prevention of preterm birth induces significant disruption of vaginal microbial stability and increases inflammation leading to premature cervical remodeling and adverse pregnancy outcomes; a review of suture material used in cervical cerclage is warranted.
ERP013319Simultaneously inferring T cell fate and clonality from single cell transcriptomes
ERP013320Tissue transcriptomes of three populations of the western european house mouse (Mus musculus domesticus)
ERP013321illumina sequencing and sanger finishing of 16 Begonia plastid genomes for phylogenetics and population biology
ERP013322Phosphorus remobilisation from rice flag leaves during grain filling.
ERP013323MiSeq 16S rRNA gene (archaeal 16S rRNA gene) sequences of 12 SCS sediments
ERP013324Insulin resistance, microbiota and fat distribution changes by a new model of vertical sleeve gastrectomy in obese rats
ERP013327comparative metagenomics of contaminated sites
ERP013328Effect of Chimeric tRNA in Candida albicans genome
ERP013329MiSeq 16S rRNA gene (Thaumarchaeota 16S rRNA gene) sequences of 12 SCS sediments
ERP013332The Impact of Viral Respiratory Infection on the Respiratory Microbiome of Adults with Cystic Fibrosis
ERP013333"LCN2 gene shapes mice microbiota"
ERP013334The genome of Hypsibius dujardini
ERP013335Degeneration of aflatoxin gene clusters in Aspergillus flavus from Africa and North America.
ERP013336C. elegans Mitotic Zone RNA-Seq
ERP013337WGS sequencing of Cellulosilyticum sp. I15G10I2
ERP013338This study is for HCC heterogeneity
ERP013339Influence of carbon sources and concrete on microbially induced corrosion of carbon steel in subterranean groundwater environment
ERP013378Determining the transcriptome of an AdeAB deletion mutant in Acinetobacter baumannii S1
ERP013379Pfizer Serotype 1 isolates
ERP013380Multi-drug resistant E.coli strains isolated from dogs at the Edinburgh University Veterinary School as well as A subset of strains associated with community-acquired canine UTI
ERP013381Mouse embryonic RNA-seq
ERP013382Characterisation of diabetic wound biofilms
ERP013383Adding a new perspective to microbiome profiling: Assessing absolute microbial abundancies by spike-in based calibration
ERP013384Clinical impact of clonal and subclonal TP53, SF3B1, BIRC3, NOTCH1, and ATM mutations in chronic lymphocytic leukemia
ERP013385Avian E.coli
ERP013386Avian E.coli(1)
ERP013387Large-scale study of total and polysomial mRNA after DDX6 depletion in HEK293 cells
ERP013388Complete sequence of one freshwater Magnetospirillum sp. strain XM-1, isolated from the Xi’an city moat, China
ERP013391Morphological, electrophysiological and transcriptomic profiling of single neurons using Patch-seq
ERP013393Homozygous deletion in MOCOS gene is associated with nephrologic syndrome in Tyrolean Grey
ERP013394A transposable element insertion in APOB causes cholesterol deficiency in Holstein cattle
ERP013395RNAseq profiling of a lpp1663 mutant compared to its isogenic parent Legionella pneumophila strain Paris
ERP013396A transposable element insertion in APOB causes cholesterol deficiency in Holstein cattle
ERP013397Haemophilus dominance and effect of antibiotic therapy on the airway microbiome in COPD
ERP013398RNAseq profiling of a lpp0148 mutant compared to its isogenic parent Legionella pneumophila strain Paris
ERP013399Virus diversity in Namib Desert soils
ERP013402Male and female transcriptome data for the brown alga Fucus ceranoides
ERP013403Early nutrient starvation response of the diatom Phaeodactylum tricornutum
ERP013404Generating tools for the molecular epidemiology of Campylobacter coli by genome sequencing
ERP013405Genomics of Campylobacter coli
ERP013406Endogenous L1 retrotransposition in ovarian carcinoma
ERP013407Examination of mRNA levels of PC9 parental, drug-tolerant, PC9-GR2 and PC9-GR3 cells after treatment with vehicle, gefitinib or WZ4002 for 24 hours.
ERP013410Expression Homeostasis during DNA Replication
ERP013411The genomic basis of adaptation to the fitness cost of rifampicin resistance in Pseudomonas aeruginosa
ERP013413WGS of Lactobacillus plantarum isolated from human gut
ERP013414Draft genome sequence of the basidiomycete, Tinctoporellus epimiltinus RS1
ERP013415ChIP-seq analysis of human neuroblastoma cell lines
ERP013416The Global Sponge Microbiome: Diversity and structure of symbiont communities across the phylum Porifera - final
ERP013417Somatic Mutations in QIMR Berghofer Melanoma Cell Line Collection Identified using Exome sequencing
ERP013418Nipbl interacts with Zfp609 and the Integrator complex to regulate cortical neuron migration
ERP013419Identification of meningococcal factors required for adhesion to epithelial and endothelial cells by high throughput screening
ERP013421Application of recombinant PHD domain instead of anti-H3K4me3 antibody
ERP013422Dfifferential gene expression in human KBM-7 clone B and KBM-7-NuKO (NUDT2 KO) cells
ERP013423Microbial communities associated with Phragmites australis along the yellow River watershed
ERP013424A unique mutation in the rpoC-gene exclusively detected in Mycobacterium tuberculosis isolates of the largest cluster of multidrug resistant cases of the Beijing genotype in Europe
ERP013425In frame of the IBSC The Genome Analysis Centre (TGAC) sequenced BACs, that constitute the MTP of barley using Illumina 2000 chemistry. The BACs presented here could not be assigned to any barley chromosome yet and were therefore assigned as 0H.
ERP013426In frame of the IBSC The Genome Analysis Centre (TGAC) sequenced BACs, that constitute the MTP of barley using MatePair Pool Sequencing. The BAC Pools presented here could not be assigned to any barley chromosome and were therefore assinged 0H.
ERP013427Draft assembly and annotation of Plasmodium chabaudi and Plasmodium berghei genomes
ERP013428Mycobacterium massilipolynesiensis sp. nov. genome
ERP013429The whole genomes of four ancient Irish individuals reveal large scale population migration to have played a key role in the Neolithic and Bronze Age transitions in the British Isles.
ERP013430Expression Homeostasis during DNA Replication [DNA/ChIP-seq data]
ERP013432A PP2A-Pab1-mediated crosstalk between TORC1 & TORC2 regulates the differentiation response in fission yeast
ERP013433Microbial Dysbiosis in gut of Acutely and Chronically SIV Infected macaques
ERP013434Metagenomes and metatranscriptomes from the diffuse hydrothermal vents of Axial Seamount from 2014
ERP013435The diversity-generating benefits of a prokaryotic adaptive immune system
ERP013437Exome Sequencing Data for MDS patients
ERP013439Microbiome of asthma patients
ERP013442The scrapheap challenge: extracting relevant data from unmapped whole genome sequencing reads.
ERP013443smallRNAseq on c. elegans germline
ERP013444Mycobacterium tuberculosis MDR cross border outbreak in Romania, Austria, and Germany
ERP013450Impact of sludge retention time on the fine composition of the microbial community and extracellular polymeric substances in a membrane bioreactor
ERP013451Unveiling genomic regions that distinguish the Assaf sheep breed from its parental Awassi breed.
ERP013452This study involves the sequencing and partial annotation of the genome of Methylacidiphilum strain RTK17.1
ERP013453454 ITS pyrosequencing of soil fungi in a subtropical experimental forest in southeast China 2.5 years after establishment (October 2011)
ERP013454Variations in the produce-associated microbiota and the occurrence frequency of extended-spectrum beta-lactamase gram-negative bacteria result in different level of ingestion risks
ERP013455Brucella vulpis strain F965 chromosome 1, complete sequence
ERP013456Brucella vulpis strain F965 chromosome 2, complete sequence
ERP013477Effects of crown gall disease on natural microbiota of Vitis vinifera
ERP013496Study of early life microbiota in preterm baby
ERP013497Tissue-specific mutation accumulation in human adult stem cells during life
ERP013499HLA typing of a family (patient and his mother) for donor selection to haploidential transplantation of hematopoetic stem cells(HSC) 1140-1, 1140-2
ERP013500HLA typing of a family (patient and his mother) for donor selection to haploidential transplantation of hematopoetic stem cells(HSC) 1432-1, 1432-3
ERP013501HLA typing of a family (patient and his father) for donor selection to haploidential transplantation of hematopoetic stem cells(HSC) 1434-1, 1434-3
ERP013502High prevalence of TP53 mutations is associated with poor survival and epithelial-mesenchymal transition signature in gliosarcoma patients
ERP013503Capsella rubella small RNA data
ERP013504A highly conserved bacterial D-serine uptake system links host metabolism and virulence
ERP013505Genomic sequencing of Maconellicoccus hirsutus and its endosymbionts
ERP013506Genomic sequencing of Ferrisia virgata and its endosymbionts
ERP013507Genomic sequencing of Pseudococcus longispinus and its endosymbionts
ERP013508Genomic sequencing of Paracoccus marginatus and its endosymbionts
ERP013509C. grandiflora x C. grandiflora F1 RNA and gDNA
ERP013510Genomic sequencing of Trionymus perrisii and its endosymbionts
ERP013511Capsella grandiflora whole genome resequencing data
ERP013512Application of local available resources in the biogas production of waste products from the bioethanol/sugar industry: Assessment of diversity and dynamics of microbial communities on different inoculation strategies and digestion set-ups
ERP013515100 bp paired-end Illumina Hiseq RNAseq of G. rostochiensis females 14 days post infection.
ERP013516Draft Genome Sequence of a PCR-Ribotype 018 Clostridium difficile clinical isolate
ERP013517Draft Genome Sequence of the Butyric Acid-Producer Clostridium tyrobutyricum strain CIP I-776 (IFP923)
ERP013519Interplay between microbial D-amino acids and host D-amino acid oxidase modifies murine mucosal defense and gut microbiota
ERP013520Reconstruction of the evolutionary history of suppressed recombination on mating type chromosomes across a fungal genus
ERP013523Development and evaluation of a core genome multilocus typing scheme for whole-genome sequence-based typing of Acinetobacter baumannii
ERP013525Biogeography of soil thaumarchaeota along soil depth in Ontario, Canada
ERP013526Herbal Formula-3 modulated intestinal microbiota in BALB/c mice
ERP013530Evolution and molecular epidemiology of Classical swine fever virus during a multi-annual outbreak among European wild boar
ERP013531Population analysis of Pan Drug Resistant Clinical Staphylococcus epidermidis
ERP013532Staphylococcus aureus is a prominent global nosocomial and community-acquired bacterial pathogen. A strong restriction barrier presents a major hurdle for the introduction of recombinant DNA into clinical isolates of S. aureus. Here, we describe the construction and characterization of the IMXXB series of Escherichia coli strains that mimic the type I adenine methylation profiles of S. aureus clonal complexes 1, 8, 30, and ST93. The IMXXB strains enable direct, high-efficiency transformation and streamlined genetic manipulation of major S. aureus lineages.
ERP013533Rapid Discovery of De Novo Deleterious Mutations in Cattle Using Genome Sequence Data: Enhancing the Value of Farm Animals as Model Species
ERP013534Rapid Discovery of De Novo Deleterious Mutations in Cattle Using Genome Sequence Data: Enhancing the Value of Farm Animals as Model Species
ERP013535Arthrogryposis multiplex congenita in a family of Red cattle
ERP013536Lethal chondrodysplasia in a family of Holstein cattle is due to a de novo mutation in the COL2A1 gene
ERP0135376H MP BAC Pools BGI
ERP013539MutChromSeq to identify the resistance gene Pm2 in hexaploid wheat
ERP013540Listeria monocytogenes WGS project
ERP013541Streptococcus zooepidemicus isolated from Icelandic horses in 2013 following an outbreak in 2010
ERP013542Whole transcriptome sequencing of barley cv. FOMA
ERP013543Novel Clostridium genome C105KS013
ERP013544Opioid-induced gut microbial disruption leads to gut barrier compromise and sustained systemic inflammation.
ERP013545Fire blight disease reactome: RNA-seq transcriptional profile of apple host plant defense responses to Erwinia amylovora pathogen infection
ERP013546Determining the transcriptome of an AdeAB deletion mutant in Acinetobacter baumannii S1
ERP013547Effect of morphine treatment on microbiome in the context of microbial transplant.
ERP013548Acropora aspera virome from Heron island, Australia
ERP013549The San Pedro Ocean time-series is a marine time-series started circa 1997. This project aims to study ecological and biogeochemical implications of global marine microbial biodiversity.
ERP013550Sequencing of the exon 8 of AR from cfDNA isolated from blood of CRPC patients
ERP013551Complete genome of 2-hydroxybiphenyl degrader Pseudomonas azelaica HBP-1 and the associated mobile genetic elements.
ERP013552Bacterial evolution in PCD and CF patients follows the same mutational steps
ERP013553Acidification and warming affect prominent bacteria during two seasonal phytoplankton bloom mesocosms
ERP013556SF21 cell line genome assembly
ERP013558Taxonomic analysis of the microbial community in stored sugar beets using high-throughput sequencing of different marker genes
ERP013559Investment of Pinova microbiota and effect of lactoperoxydase on its microbiota
ERP013560The San Pedro Ocean time-series is a marine time-series started circa 1997. This project aims to study ecological and biogeochemical implications of global marine microbial biodiversity.
ERP013561Effect of hypoxia and atpenin A5 on the human monocyte transcriptome
ERP013562Gut microbial dysbiosis in young adults with obesity
ERP013563Gut microbiome-dependent stratification of patients for anti-diabetic treatment
ERP013564FOXM1 ChIP-seq in an OE33 cell line
ERP013565Analysis of coronavirus and infected host-cell gene expression through RNA sequencing and ribosome profiling
ERP013566Transcriptome analysis of Gerbera hybrida with special attention to defence pathways
ERP013585performing RRBS on porcine ovaries and profile their genome-wide DNA methylation to analyze their methylome
ERP013586Time course transcriptome of Lactobacillus oligofermentans LMG 22743 during the growth on glucose, ribose and xylose
ERP013587Citrobacter freundii Genome sequencing
ERP013588Draft genome sequence of Escherichia coli JF733
ERP013589The influence of the microbiota on adipocyte metabolism and the immune system
ERP013590Propionibacterium freudenreichii ssp. shermanii JS genome annotation project
ERP013591Bacteria-Immune System Interactions in Gut –targeting on IBD
ERP013592Cell plasticity identifies an epigenetically distinct cancer subpopulation driving drug resistance and progression
ERP013593MutChromSeq to identify Eceriferum-q gene in barley
ERP013594pufM genes from coastal waters of Australia
ERP013595The first gut metagenome of wild Bar-headed geese
ERP013596Draft Genome of Rhodococcus rhodochrous TRN7 Isolated from the Coast of Trindade Island, Brazil
ERP013597Genomic evidence establishes Anatolia as the source of the European Neolithic gene pool
ERP013598Complete genome sequence of Acinetobacter baumannii R2091
ERP013599Taq Polymerase Error Rate and Profile Determined by High Coverage Single Molecule Amplicon Sequencing
ERP013600Flow sorted chromosomes 5D of lines involved in mapping of Pm2 in wheat.
ERP013601Comparison of different Actinoplanes sp. strains to Actinoplanes sp. SE50/110
ERP013602Opbp ChIP-seq in Drosophila melanogaster embryos
ERP013603Saturating mutagenesis with assembled CRISPR-Cas9 ribonucleoprotein complexes.
ERP013604A stable genetic polymorphism underpins microbial syntrophy in an anaerobic reactor
ERP013605Eighteenth century Yersinia pestis genomes reveal the long-term persistence of an historical plague focus
ERP013607Multicenter study to validate an updated assay design for next-gen sequencing to identify HIV-1 drug-resistance mutations and determine co-receptor use with high sensitivity
ERP013608Sequences associated with the San Pedro Ocean Time-series
ERP013609Comparative transcriptome analysis of three color variants of the sea cucumber Apostichopus japonicus
ERP013611Geomicrobiological study of experimental leaching of uranium
ERP013612PCR-cloning of FTHFS gene
ERP013614Clinical gram-negative samples sequenced using Oxford Nanopore MinIONs by MMM group in Oxford
ERP013616Acetate accumulation enhances mixed culture fermentation of biomass to lactic acid
ERP013618Polymerase Specific Error Rates and Profiles Identified by PacBio Single Molecule Sequencing
ERP013620A new Brucella species
ERP013621A new Brucella species
ERP013625A total of 90 Mycobacterium tuberculosis isolates in MIRU-VNTR transmission clusters in Switzerland.
ERP013626Agrobacterium CFBP 5771
ERP013627Agrobacterium S56
ERP013628Agrobacterium TT111
ERP013629Agrobacterium CFBP 5494
ERP013630Whole-genome short reads of Mycobacterium tuberculosis isolates belonging to an outbreak (2011-2014) in Oslo, Norway
ERP013631Agrobacterium CFBP 6623
ERP013632Agrobacterium CFBP 5621
ERP013633Agrobacterium B6
ERP013634Agrobacterium Kerr 14
ERP013635Agrobacterium CFBP 6626
ERP013636Agrobacterium NCPPB 925
ERP013637Agrobacterium NCPPB 1641
ERP013638Agrobacterium RV3
ERP013639Agrobacterium Zutra 3-1
ERP013640Agrobacterium J-07
ERP013641Agrobacterium Hayward 0363
ERP013642Agrobacterium CFBP 6927
ERP013644Illumina sequencing data of libraries made from DNA extracted from barley grains excavated at Yoram Cave, Israel
ERP013645Investigation of the transcriptional changes associated with phenotype switching in Streptococcus equi subspecies equi strain 1691.
ERP013646Disturbance During Biofilm Community Succession Promotes Diversity and Cooperation
ERP013647Immunity’s pregnant pause facing influenza in allogenically-mated mice
ERP013648The fecal microbiota of free-ranging brown bears was collected during their active phase (summer) and hibernation (winter). Germfree mice were colonized with the seasonal bear microbiota. Bear fecal and mouse cecal microbiota were analyzed using 16S profiling.
ERP013649Comparative transcriptomics of Rhizobium mesoamericanum STM3625, Cupriavidus taiwanensis LMG19424 and Burkholderia phymatum STM815 when induced by root exudates of Mimosa pudica
ERP013650Whole genome characterization of VTEC producing the VT2f variant isolated from HUS and comparison of isolates from HUS, uncomplicated diarrhea, and healthy pigeons
ERP013651Transcriptional response of Arabidopsis thaliana in systemic acquired resistance: critical roles for pipecolic acid and salicylic acid
ERP013653Association between clinical antibiotic resistance and susceptibility profiles of Pseudomonas aeruginosa in the cystic fibrosis lung
ERP013654Genome-wide identification and characterisation of human DNA replication origins by initiation site sequencing (ini-seq)
ERP013655CLIPSeq for the RNA-Binding protein CELF1 in human HeLa cells
ERP013662The genome-wide association of sororin with cohesin occurs exclusively on replicated DNA
ERP013663Marine eukaryote network revealed by high frequency temporal survey in the San Pedro Ocean Time-series station
ERP013664Whole genome sequencing suggests a substantial number of “sporadic” Salmonellosis cases may be attributable to a recurrent outbreak source
ERP013665Improvement of the banana "Musa acuminata" reference sequence using NGS data and semi-automated bioinformatics methods
ERP013670Genome sequencing of 31 Pichia pastoris isolates
ERP013671Human gut colonisation may be initiated in utero
ERP01367253BP1 binding analysis in HeLa cells
ERP013676Genomic analysis of Salmonella enterica serotype Paratyphi A during an outbreak in Cambodia, 2013-2015
ERP013677Epitope mapping of a monoclonal antibody directed against Neisserial Heparin Binding Antigen using next generation sequencing of antigen-specific libraries
ERP013678The genome of Leuconostoc gelidum subsp. gasicomitatum C120c, isolated from vegetable salad.
ERP013679The genome of Leuconostoc gelidum subsp. gasicomitatum C122c, isolated from vegetable salad
ERP013680The genome of Leuconostoc gelidum subsp. gasicomitatum KSL4-2, isolated from acetic acid preserved herring with carrots.
ERP013681The genome of Leuconostoc gelidum subsp. gasicomitatum PB1a, isolated from carrot.
ERP013682The genome of Leuconostoc gelidum subsp. gasicomitatum PB1e, isolated from carrot
ERP013683The genome of Leuconostoc gelidum subsp. gasicomitatum PL111, isolated from carrot
ERP013684RNA-sequencing of murine T-cell acute lymphoblastic leukemia (T-ALL) cells to investigate expression profiling of lymphocyte deficient for Tet2 and mutated for DNMT3A
ERP013687Quarterly time series of the microbial community in the San Pedro Channel
ERP013689PacBio Whole Genome Sequencing to identify structural variation in Han Chinese Trio
ERP013692Identification of SNPs from short read data spanning the olive genome
ERP013694Genome sequences of UK isolates of Staphylococcus aureus: Mining the exoproteome of clinically-relevant UK isolates of Staphylococcus aureus reveals proteolytic cleavage events and a limited group of common expressed proteins
ERP013698Genome streamlining in bacteria evolving under high predation pressure
ERP013699Transgenic expression of BEN, a member of TFII-I family, in various murine adipose tissues
ERP013700A transcriptome-based global map of signaling pathways in the ovarian cancer microenvironment associated with clinical outcome
ERP013702Great-ape Y-chromosome diversity
ERP013703Infection of a nonhost plant by Albugo laibachii enables full colonization by Phytophthora infestans
ERP013704Annual monitoring of a tannery sludge bacterial community
ERP013705Genome sequencing of bacteria after catalyzed reporter deposition fluorescence in situ hybridization (CARD-FISH) and multiple displacement amplification (MDA)
ERP013706Genome sequence of canine herpesvirus
ERP013707Six plasmids from an on-farm biopurification system
ERP013708ChIP-sequencing of murine T-cell acute lymphoblastic leukemia (T-ALL) cell lines to investigate histone methylation profiling of lymphocyte deficient for Tet2 and mutated for DNMT3A
ERP013709Reduced representation of bisulfite sequencing (RRBS) of murine T-cell acute lymphoblastic leukemia (T-ALL) cells to investigate DNA methylation profiling of lymphocyte deficient for Tet2 and mutated for DNMT3A
ERP013710MeDIP-sequencing of murine T-cell acute lymphoblastic leukemia (T-ALL) cells to investigate DNA methylation profiling of lymphocyte deficient for Tet2 and mutated for DNMT3A
ERP013711hMeDIP-sequencing of murine T-cell acute lymphoblastic leukemia (T-ALL) cells to investigate DNA hydroxymethylation profiling of lymphocyte deficient for Tet2 and mutated for DNMT3A
ERP013713Gene expression patterns in developing intestinal organoids exposed to prolonged FGF4- and Wnt-signaling
ERP013714Functional sequestration of MOAG-2/LIR-3 by polyglutamine expansion proteins
ERP013715ChIPSeq profiling of LIR3 binding sites in C.elegans
ERP013716TFIIB ChIP-seq for S. cerevisiae - Genome-wide generalized additive models
ERP013717The role of cytokinins in clubroot disease
ERP013718Dicathais orbita, a mollusc of the Muricidae family, is well known for the production of an expensive dye, Tyrian purple and its brominated precursors having anticancer properties. Illumina HiSeq 2000 platform was used for transcriptome sequencing of hypobranchial gland, prostate gland, albumen gland, capsule gland, mantle and foot tissues of D. orbita.
ERP013719Under construction
ERP013720In this study we tested the hypothesis that generalized codon ambiguity could be beneficial to evolution of resistance against amphotericin B. For this, we have evolved C. albicans strains that incorporate serine at CTA , CTC, CTT (Leucine), ATC (Isoleucine), GCC (Alanine), GGA (Glycine), AAG (Lysine), ACC (Threonine) and TAC (Tyrosine) codons in the presence amphotericin B and characterized them at the genome level. We identified a number of genomic features and key genes that shed new light onto how chimeric tRNAs affects acquisition of resistance to amphotericin B.
ERP013721Construction of genetic linkage map for Flathead grey mullet (Mugil cephalus) and mapping of the sex determination region
ERP013723Comprehensive application of single-cell genomics
ERP013724Monthly time-series analysis of the marine microbial community from surface to seafloor at the San Pedro Ocean Time-series station
ERP013725PRC2 8 cell embryo paternal epigenetic inheritance
ERP013726Whole Transcription Analysis of the Type 1 IFN Response
ERP013727Small RNA Transcriptional Response to Type 1 IFN
ERP013728MicroRNA Regulation in Response to Type 1 IFN Stimulation
ERP013729A statistical test for the detection of inhomogeneity in metagenomic samples
ERP013730ChIP-Seq Analysis of Eed hypo/wt
ERP013731we first provide mutation profile of five tumor-normal paired CSCNETs using by whole exome sequencing
ERP013732Genome sequencing of a C. divulgatum strain PM4, novel cell wall-lacking, acidophilic, mesophilic, organotrophic and facultatively anaerobic archaeal strain that have been isolated from acidic streamer formed on the surfaces of copper-containing sulfidic deposits in Mynydd Parys/Parys Mountain, Isle of Anglesey, UK.
ERP013733Genome sequencing of a C. divulgatum strain S5, novel cell wall-lacking, acidophilic, mesophilic, organotrophic and facultatively anaerobic archaeal strain that have been isolated from acidic streamer formed on the surfaces of copper- ore-containing sulfidic deposits in the southwest Spain.
ERP013734Gordonibacter urolithinfaciens
ERP013735RNA-seq and RRBS datasets from hippocampal tissue collected from 4 week old control and iron deficient piglets.
ERP013736AMF community LSU sequences from different land-use methods
ERP013737Comparison of samples and mock communities amplified with single-base variations in 515-Forward universal primer
ERP013738Whole genome sequence of a CTX-M-15-producing E. coli isolate clone ST131.
ERP013739Evaluating the diversity and activity of marine archaea via 16S rRNA gene and transcript sequencing
ERP013741Microbial diversity in a cave ecosystem
ERP013743Detection of fungal community composition in Inner Mongolia steppe.
ERP013746Synthetic community metagenomes
ERP013747Detection of mcr-1 gene in ESBL-E from the Netherlands, 2009-2015
ERP013748High-throughput sequencing of Bacillus anthracis in France: investigating genome diversity and population structure using whole-genome SNP discovery
ERP013749Metabarcoding of the fungi associated with the roots of oilseed rape, using the ITS1 region.
ERP013752In this study, we present the draft genome of L. waleckii inhabiting extreme alkaline water of Lake Dali Nor.
ERP013753Genotyping by sequencing of Salix viminalis full-sib family "S5"
ERP013754INC-Seq: Accurate single molecule reads using nanopore sequencing
ERP013755phylogeny and functional analysis
ERP013759Gut microbiota characterization of CD1d-dependent NKT cells knockout mice before and after induction of contact hypersensitivity
ERP013760Discovery of recurrent MALAT1-GLI1 oncogenic fusion and GLI1 amplification to define a subset of plexiform fibromyxomas
ERP013761Post-weaning blood transcriptomic differences between Yorkshire pigs divergently selected for residual feed intake
ERP013762Whole-Genome Sequencing of a Canine Family Trio Reveals a FAM83G Variant Associated with Hereditary Footpad Hyperkeratosis
ERP013763Novel Clostridium genome C105KSO14
ERP013764Genome sequence of C105KSO15
ERP013765Transcriptome analysis of PE-degrading Pseudomonas aeruginosa
ERP013766Pyrococcus chitonophagus DSM 10152
ERP013768A Distinct Cutaneous Microbiota Profile in Autoimmune Bullous Disease Patients
ERP013770Remapping of exome sequencing reads of the 1000 Genomes Project to GRCh38
ERP013771Remapping of low coverage WGS reads of the 1000 Genomes Project to GRCh38
ERP013772Remapping of high coverage WGS reads of the 1000 Genomes Project to GRCh38
ERP013777Immune-modulating poxviruses shift the mice gut microbiome
ERP013779Trichuris trichiura Adult Worm Transcriptome using Ion Torrent sequencing
ERP013780Sequencing Alpine A. thaliana pools
ERP013781Ruminococcus gnavus was isolated from human faecal samples of a healthy adult human individual. This study aims to investigate mucin degradation by focussing on the utilisation of terminal mucin glycans.
ERP013784Gut microbiota are perturbed in patients pre- Whipple surgery and partly normalized after the treatment
ERP013785Identification of genes and network in response to long/middle/short day photoperiod,
ERP013786Genomics of speciation and introgression in Princess cichlid fishes from Lake Tanganyika
ERP013788Sequencing of a Fleckvieh animal for dominant Osteogensis imperfecta
ERP013789Whole-genome sequencing of a Holstein animal for dominant chondrodysplasia
ERP013792Sorghum rhizosphere soil for pgpr study
ERP013793Light-dependent microbial metabolisms drive carbon fluxes on glacier surfaces
ERP013794RNA-seq of N. gansuense-infected (E+) vs. non-infected (E-) A. inebrians
ERP013795Differential RNA-seq for identifying toxin MazF and MqsR cleavage sites, beginning of transcripts and stationary phase cleavage sites in Escherichia coli (mRNA, rRNA and other ncRNA)
ERP013796High throughput analysis of class 1 integron gene casettes in wastewater environments
ERP013798Distinct patterns in global gene expression reflect synergy in a multispecies biofilm
ERP013799Evolution of fusC-containing ST5 MRSA in New Zealand
ERP013801Transcriptional Responses in Root and Leaf of Prunus persica under Drought Stress Using RNA Sequencing
ERP013802ESBL-encoding E. coli from companion animals and livestock in Tanzania
ERP01380316S rDNA fragment to detect different animal species contained in candies.
ERP013804Canine whole genome sequence, Border Collie Breed, sensory neuropathy case
ERP013805Organic micropollutants in aerobic and anaerobic membrane bioreactors (MBR): changes in microbial communities and gene expression
ERP013806Canine whole genome sequence, Hungarian Vizsla breed, cerebellar cortical degeneration case
ERP013807Canine cerebellum RNAseq, Hungarian Vizsla breed, cerebellar cortical degeneration case
ERP013808Genome sequencing of bovine and ovine Staphylococcus isolates
ERP013809ATAC-seq of Oesophageal Cell Lines
ERP013810Integrative taxonomy and population genomics of Aeromonas media and related species
ERP013811Integrative taxonomy and population genomics of Aeromonas media and related species
ERP013812Integrative taxonomy and population genomics of Aeromonas media and related species
ERP013813Integrative taxonomy and population genomics of Aeromonas media and related species
ERP013814Integrative taxonomy and population genomics of Aeromonas media and related species
ERP013815Phialocephala subalpina UAMH11012 genome sequencing
ERP013816Integrative taxonomy and population genomics of Aeromonas media and related species
ERP013817Integrative taxonomy and population genomics of Aeromonas media and related species
ERP013818Genome sequencing of Acinetobacter baumannii isolates
ERP013820Canine cerebrum RNAseq, Border Collie Breed, sensory neuropathy case
ERP013821iCLIP of GFP fusion proteins
ERP013822Whole genome sequencing of Swedish Salmonella Dublin isolates from cattle
ERP013826Dual readout of two histone modifications at the same time with synthetic recombinant proteins reveals H3K36me3-H3K9me3 bivalency at weakly transcribed genes
ERP013827Impact of faecal microbiota transplantation on the intestinal microbiome in metabolic syndrome patients
ERP013829RNA-seq of coding RNA of wheat heads from 3, 6, 12, 24, 36, and 48 hours after inoculation of fungal pathogen Fusarium graminearum or mock inoculation
ERP013831anaerobic digestion
ERP013832ESBL producers from fish and soil samples in Tanzania
ERP013833Diversity of Pico- to Mesoplankton Along the 2000 km Salinity Gradient of the Baltic Sea
ERP013836Molecular epidemiology of Paenibacillus larvae, the causative agent of American foulbrood in honey bees
ERP013839gene expression profiling of ventilation induced muscle wasting in rat plantaris
ERP013841Gorbachella massiliensis genome
ERP013842Intestinimonas gabonensis genome
ERP013843Cymodocea nodosa response to simulated CO2-driven ocean acidification
ERP013844Bacillus phoceensis genome
ERP013845Butyricimonas phoceensis genome
ERP013847Rhodobacteraceae sp. HL-91 genome sequencing
ERP013848Sequencing of ESBL-producing E. coli from humans in Tanzania
ERP013849RNA-Seq (HEK93_Homo Sapiens)
ERP013850Bacillus methylotrophicus B25 complete genome
ERP013851Metagenome and viral metagenome fraction isolated from Blanes (Mediterranean Sea)
ERP013852Complete genome sequence of Psychrobacter sp. DAB_AL43B
ERP013853Pika gut may select for rare but diverse environmental bacteria
ERP013856Wheat straw mixed microbial community metatranscriptome
ERP013857Clostridium bouchedurhonense genome
ERP013858Peptoniphilus phoceensis genome
ERP013859Genome sequencing of Clostridiales bacterium CHKCI00
ERP013860Genome sequence of Coriobacteriaceae bacterium CHKCI002
ERP013861Genome sequence of Alistipes sp. CHKCI003
ERP013862Genome sequence of Eubacteriaceae bacterium CHKCI004
ERP013863Genome sequence of Eubacteriaceae bacterium CHKCI005
ERP013864Genome sequence of Clostridiales bacterium CHKCI006
ERP013865Protection of the human gut microbiome against antibiotics
ERP013868Export of microbial cells from the Greenland Ice Sheet
ERP013869Commensal E. faecium isolate from non-hospitalised person, isolated from faeces in 1998
ERP013870BMI1 regulates myogenic differentiation, Hippo signaling, and oncogene expression in embryonal rhabdomyosarcoma.
ERP013871Sequencing of M. chitwoodi
ERP013872The maternal microbiota drives early postnatal innate immune development
ERP013873Effects of low light and iron and light co-limitation on Thalassiosira oceanica
ERP013874Effects of low light and iron/light co-limitation on Thalassiosira weissflogii
ERP013875Clinical E. faecium isolate from hospitalised person, isolated from wound/soft tissue. Isolation year unknown
ERP013877Analysis of insertion preferences of the Lotus japonicus retrotransposon 1 (LORE1)
ERP013878water sample
ERP013880Functional genomics of genes involved in Paramecium MAC genome development - DNA-seq
ERP013882Staphylococcus hyicus
ERP013884To elucidate the genome-based epidemiology and phylogenomics of azithromycin resistant Neisseria gonorrhoeae strains (MIC>2 mg/L) in 2009-2014 in Europe and clarify the azithromycin resistance mechanisms.
ERP013888Whole-genome DNA methylation profiling of et1 and et2 mutants in A. thaliana
ERP013889diversity of the common
ERP013890microbiology of brine pool
ERP013892Dna-Seq: pBAC70 and pBAC90 construction (Viruses).
ERP013893To trace the origin, evolution, and dissemination pattern of the USA300 CA-MRSA clone in France, we sequenced a collection of strains of this lineage from cases reported in France in the last decade and compared them with 431 ST8 strains from the USA.
ERP013894Whole-genome sequencing reveals human to monkey transmission of Staphylococcus aureus in The Gambia and a novel monkey-adapted clade.
ERP013896Transcriptome assembly and allele expression in ripening strawberry Fragaria × ananassa fruit.
ERP013901Occurrence and diversity of both bacterial and fungal communities in dental unit waterlines (DUWL) subjected to disinfectants
ERP013902ChIP-seq data of HNF4A, CEBPA, FOXA1, H3K27ac,
ERP013905Genomic resources and draft reference assemblies of the human and porcine scabies mites, Sarcoptes scabiei var. hominis and var. suis
ERP013906MiSeq 16S rRNA gene (archaeal 16S rRNA gene) sequences of 33 Mai Po sediments, including 18 samples from winter and 15 samples from summer
ERP013907RNA-seq: B. subtilis expression after infection with the virus f29.
ERP013908Impact of Sample Type and DNA Isolation Procedure on Genomic Inference of Microbiome Composition
ERP013909MiSeq 16S rRNA gene (prokaryotic 16S rRNA gene) sequences of 33 Mai Po sediments, including 18 samples from winter and 15 samples from summer
ERP013911bacterial community structure and function changes after fire
ERP013912Identification of SNPs linked to putative resistance loci in the Dothistroma-Pinus pathosystem
ERP013913RNA-seq of synovial membranes from a preclinical model of post-traumatic knee osteoarthritis to evaluate the effects of corticosteroid treatment
ERP013914RNA-Seq analysis of human intact and damaged osteoarthrtitic cartilage following total knee replacement.
ERP013916The Estonian Biocentre Human Genome Diversity Panel (EGDP)
ERP013917Sequencing of an equine strain of Streptococcus zooepidemicus.
ERP013922A metaproteomic analysis of the response of a freshwater microbial community under nutrient enrichment
ERP013924Transcriptome analysis of the Indian prawn Fenneropenaeus indicus
ERP013925Genomic sequence of bacteriophage LM33_P1 infecting O25b:H4 Escherichia coli strain LM33
ERP013927De novo transcriptome of a novel Graphium fungal species derived from a mixed microbial composting community enriched with wheat-straw, further grown on wheat straw
ERP013928SuhB associates with Nus factors to facilitate 30S ribosome biogenesis in Escherichia coli
ERP013929Rice-straw enriched mixed microbial composting community de novo metatranscriptome
ERP013933Reproducibility of associations between the human gut microbiome and colorectal cancer assessed in a patient population from Washington, DC, USA
ERP013934Single-molecule sequencing of complex HBV genomic variations during 15 years of chronic HBV infection.
ERP013935transgenic plant analysis using NGS
ERP013936Microbial community analysis of Food Waste Treating LBRs
ERP013937Expression profiling of human embryonic stem cells with overexpression
ERP013938Effect of DNA extraction methods on the determination of the structure of microbial communities in the phosphogypsum waste heap soil
ERP013939Genome of the freshwater demosponge Spongilla lacustris
ERP013940Genomic inversion drives small colony variant formation and increased virulence in P. aeruginosa
ERP013941Identification of the oak microbiome
ERP013942A sampling and metagenomic sequencing-based methodology for monitoring antimicrobial resistance in swine herds
ERP013944A Bacillus sp. isolated from sediments of the Sarno River mouth, Gulf of Naples (Italy) produces a biofilm biosorbing Pb(II)
ERP013946Sequence of the Staphylococcus aureus LYO-S2 strain from a prosthetic joint infection
ERP013948Genome wide transcription start sites analysis of the Xanthomonas campestris pv. campestris B100 with insights into the gum gene cluster directing the biosynthesis of the exopolysaccharide xanthan
ERP013949Genomic sequence and annotation of two strains of Paenibacillus glucanolyticus
ERP013950Moleculo short reads and long synthetic reads for SV group of 1000GP
ERP013951Meta-genomic analysis of toilet waste from long distance flights
ERP013952Single-cell expression profiling of human embryonic stem cells and day 3 blastomeres
ERP013954An evolved begomovirus complex infecting tomato in Pakistan, an outcome of recent trade
ERP013955Evolution of the immune system influences speciation rates in teleost fishes
ERP013956Global Staphylococcus aureus CC59 in humans
ERP013961Burkholderia sordidicola LMG 22029 genome sequencing and assembly
ERP013962Burkholderia humi LMG 22934 genome sequencing and assembly
ERP013963Burkholderia telluris LMG 22936 genome sequencing and assembly
ERP013964Burkholderia terrestris LMG 22937 genome sequencing and assembly
ERP013965Burkholderia choica LMG 22940 genome sequencing and assembly
ERP013966Burkholderia udeis LMG 27134 genome sequencing and assembly
ERP013967Burkholderia cordobensis LMG 27620 genome sequencing and assembly
ERP013968Burkholderia sp. LMG 29314 genome sequencing and assembly
ERP013969Burkholderia sp. LMG 29315 genome sequencing and assembly
ERP013970Burkholderia sp. LMG 29316 genome sequencing and assembly
ERP013971Burkholderia sp. LMG 29317 genome sequencing and assembly
ERP013972Burkholderia sp. LMG 29318 genome sequencing and assembly
ERP013973RNA sequencing of the spleen / headkindey of 6 juvenile Atlantic cod (Gadus morhua) individuals.
ERP013974Burkholderia sp. LMG 29319 genome sequencing and assembly
ERP013975Burkholderia sp. LMG 29320 genome sequencing and assembly
ERP013976Burkholderia sp. LMG 29321 genome sequencing and assembly
ERP013977Burkholderia sp. LMG 29322 genome sequencing and assembly
ERP013978Burkholderia sp. LMG 29323 genome sequencing and assembly
ERP013979Burkholderia sp. LMG 29324 genome sequencing and assembly
ERP013980Burkholderia sp. LMG 29325 genome sequencing and assembly
ERP013981Burkholderia sp. LMG 29326 genome sequencing and assembly
ERP013982Effect of personal care products containing triclosan on the microbiome: a cross-over control study (oral)
ERP013983RNA-based sequencing approach (RNA-seq) to assess the global expression profiles of the wheat yellow rust pathogen Puccinia striiformis f. sp. tritici (PST) and its host during infection
ERP013984Changes in the eye microbiota associated with contact lens wearing
ERP013985Effect of personal care products containing triclosan on the microbiome: a cross-over control study (stool)
ERP013986Genetic associaiton with vaginal microbiome in Korean twins
ERP013987Comprehensive amplicon-based metagenome analyses reveal long-term impacts of timber harvesting on soil microbial communities at reforested sites across North America.
ERP013988Comprehensive stable-isotope probing reveal diversity of soil decomposer communities across North America.
ERP013989Liver carcinoma (LC) is a common malignancy worldwide with high morbidity and mortality. Human microbiota has already been reported to be closely associated with LC progression by microbiota-liver axis, but few knowledge is available on the oral microbiota of LC patients, and more attention should be given to evaluation of tongue coat microbial characteristics in clinical LC patients. This paper analyzed the microbial population and its dispersed characteristics in the tongue coat biofilm system to explore the similarities and differences observed in tongue biofilm assessments of LC patients. We found that the microbial diversity of tongue coat was increased in LC patients versus the health control. Bacterial microbial community could be significantly separated between LC patients and health control based on principal components analysis (PCA). The microbial composition was significantly changed, and the taxon differences were analyzed between both groups, including phylum, class, order, family and genus levels. Bacterial dysbiosis was presented by Lefse and LDA analysis. Importantly, on the genus level, two important bacteria including Oribacterium and Fusobacterium could be used to distinguishing LC patients and health control. These findings provided a novel and non-invasive diagnostic biomarker for liver carcinoma.
ERP013991Targeted enrichment to elucidate the Holstein-Frisian haplotypes HH5 and CDH
ERP013992Sequencing 16S RNA gene of rhizosphere
ERP013994ParaA epidemic Cambodia 2014
ERP013995Chryseobacterium indologenes genome
ERP013998Isolation and characterization of NDM-positive Escherichia coli from municipal wastewater in Saudi Arabia
ERP013999Colistin heteroresistance
ERP014000Colistin heteroresistance
ERP014002Preliminary Acute Promyelocytic Leukemia (APL) whole exome sequencing (WES) studies have identified a huge number of somatic mutations affecting more than a hundred different genes mainly in a non-recurrent manner, suggesting that APL is a heterogeneous disease with secondary relevant changes not yet defined.
ERP014003PE/PPE MTB study
ERP014004Next generation sequencing identifies major DNA methylation changes during progression of Ph+ chronic myeloid leukemia
ERP014005Next generation sequencing identifies major DNA methylation changes during progression of Ph+ chronic myeloid leukemia_RRBS_samples
ERP014006Construction a high resolution linkage map based on transcriptome of goldfish(Carassius auratus)
ERP014009Seeds of a rye (Secale cereale L.) self-fertile inbred line 7415 with and without Bs were grown under long-day conditions (16 h light, 22°C day/16°C night), and all experimental materials from different tissues were collected during this period. Illumina paired-end RNAseq reads obtained from generative (anther) and vegetative (root and leave) tissues with (4B) and without (0B) B chromosomes.
ERP014010Protochlamydia greubae genome
ERP014011Salivary microbiota from primary Sjögren's syndrome patient
ERP014012Human Y-chromosomal haplogroup N: A non-trivial time-resolved phylogeography that cuts across language families
ERP014014Single-cell RNA-seq of blastomeres from 2- to 32-cell stage mouse embryos
ERP014018Colistin resistance in Salmonella and E. coli isolates from a pig farm in Great Britain
ERP014019RAD-seq reduced-genome sequencing of 200 S. cerevisiae strains for phylogenetic analysis
ERP014021Methanoculleus sp MAB1 the syntrophic partner of acetate oxidizing bacteria
ERP014022The contents of unlabelled Ancient Roman and Egyptian amphoras reflect the smaller scale local transit of secondary domestic cargoes
ERP014023Strengths and biases of morphological and NGS data on eukaryotic microbiome characterizations
ERP014024Host selection of caecal acetogens with growth
ERP014025Selective advantages gained through chromosome instability outweigh fitness drop during cancer initiation
ERP014026NGS of N. gonorrhoeae in urine
ERP014028We describe the expression of all genes in Human Hepatocellular cell line (Huh-7, JCRB0403).
ERP014029RNAseq transcriptome assembly and expression profiling of a drought-control experiment with barley cultivar Scarlett and Spanish landrace SBCC073.
ERP014030Gynandropsis gynandra de-etiolation experiment
ERP014031Population-based whole genome sequence analysis of human ocular Chlamydia trachomatis infection identifies genomic markers associated with disease severity
ERP014032begnin tumor
ERP014033begnin tumor
ERP014034Cellulomonas timonensis genome
ERP014035Oncogenic Herpesvirus utilizes stress-induced cell cycle checkpoints for efficient lytic replication.
ERP014036Collinsella ihumii genome
ERP014037Serogroup derived by WGS for L.monocytogenes
ERP014038Bacteroidetes sp. R-53146 genome sequencing and assembly
ERP014039Members of Gammaproteobacteria as indicator species of healthy banana plants on Fusarium wilt-infested fields in Central America
ERP014040Rearing density and dietary yeast on microbiota of tilapia
ERP014041This study describes the emergence and evolution of CC398 MRSA in New Zealand
ERP014042Xanthomonas massiliensis genome
ERP014043Paenibacillus phoceensis genome
ERP014044Enterobacter timonensis genome
ERP014045Cortical transcriptome of female mice treated with vehicle or estrogen and subjected to hypoxia
ERP014046Kwashiorkhor gut
ERP014047Microbial community dynamics and response to plant growth-promoting organisms in the rhizosphere of four common food crops cultivated in hydroponics
ERP014048Draft Genome Sequence of Sporomusa sphaeroides DSM 2875
ERP014049The legacy effect of cover crops on soil fungal populations in a cereal rotation
ERP014053Identification of target genes of the transcription factors TCF1 and TCF3 in mouse embryonic stem cells (ChIP-Seq)
ERP014054Characterizing the bacterial community in sequential ( stable, exacerbation and post-exacerbation) COPD sputum samples using 454GS-FLX .
ERP014055Genome assembly and annotation of Campylobacter geochelonis
ERP014056Reads derived from bacteriophage Lambda whole genome or specific amplicons demonstrating the application of the Read Until features of the Oxford Nanopore minION.
ERP014057Term-seq reveals abundant ribo-regulation of antibiotics resistance in bacteria
ERP014058Bovine teat microbiome analysis revealed dysbiosis in quarters with high mastitis prevalence
ERP014062Unliganded Estrogen Receptor Beta cooperates with Argonaute 2 in the modulation of transcription rate and splicing of target genes in breast cancer cells.
ERP014063Expression Homeostasis during DNA Replication [DNA/ChIP-seq data alpha-factor]
ERP014064Transcription profiles in symbiotic Cycloclasticus hosted by invertebrates at Gulf of Mexicooil seeps.
ERP014065The interaction between the vaginal microbiome, cervical length and vaginal progesterone treatment for preterm birth risk
ERP014066Conversion of L-lactate into n-caproate by a continuously fed reactor microbiome
ERP014067Rumen microbiome
ERP014068soil bacterial communities along a samll-scale elevational gradient on Qilian mountain in Tibetan Plateau
ERP014069Transgenerational transmission and modification of pathological traits induced by prenatal immune activation
ERP014070COMPARE H5N8 Pilot Study
ERP014072A hormone-related female anti-aphrodisiac in Nicrophorus beetles
ERP014073Human Fertile Sperm Transcriptome
ERP014074The evaluation of whole genome sequencing for epidemiological typing of Legionella pneumophila
ERP014076Antibiofilm effect enhanced by modification of 1,2,3-triazole and palladium nanoparticles on polysulfone membranes
ERP014078Molecular characterization of blaESBL-producing Escherichia coli cultured from pig farms in Ireland
ERP014079Molecular characterization of blaESBL-producing Escherichia coli cultured from pig farms in Ireland
ERP014080Molecular characterization of blaESBL-producing Escherichia coli cultured from pig farms in Ireland
ERP014081Molecular characterization of blaESBL-producing Escherichia coli cultured from pig farms in Ireland
ERP014082Molecular characterization of blaESBL-producing Escherichia coli cultured from pig farms in Ireland
ERP014083Molecular characterization of blaESBL-producing Escherichia coli cultured from pig farms in Ireland
ERP014084Molecular characterization of blaESBL-producing Escherichia coli cultured from pig farms in Ireland
ERP014085Sequencing Caenorhabditis sp. 21
ERP014086Sequencing Caenorhabditis sp. 26
ERP014087Comparative genomic analysis of cyanobacterial symbiont in geographically distant Theonella swinhoei
ERP014088Comparative genomic analysis of Entotheonella gemina
ERP014089Comparative genomic analysis of Entotheonella factor
ERP014090Sequencing Caenorhabditis sp. 31
ERP014091Sequencing Caenorhabditis sp. 32
ERP014092Sequencing Caenorhabditis sp. 39
ERP014094test study
ERP014095Nitrifying reactor with FNA treatment
ERP014096Sequencing Caenorhabditis sp. 43
ERP014098Characterization of the Rett syndrome gut microbiota
ERP014099Sequencing Caenorhabditis sp. 40
ERP014101Analysis of the Phialocephala subalpina transcriptome during colonization of its host plant Picea abies
ERP014102Manipulation of host and parasite microbiotas: Survival strategies during chronic nematode infection
ERP014103Role of microRNA-200 in metabolic disease
ERP014105Transgenerational effects persist down the maternal line in marine sticklebacks: gene expression matches physiology in a warming ocean
ERP014106Identification of ETO2-GLIS2 targets by ChIP-sequencing
ERP014107Rhizosphere and cyst microbiome in suppressive soils
ERP014108High-Resolution Mapping of Crossover and Non-Crossover Recombination Events by Whole-Genome Re-Sequencing of an Avian Pedigree
ERP014110Poor plant performance under simulated climate change is linked to mycorrhizal responses in a semi-arid shrubland
ERP014111Bacterial community composition of cow rumen
ERP014112Bacterial community composition of cow manure
ERP014115Focussing reduced representation CpG sequencing through judicious restriction enzyme choice
ERP014116Complete genome sequence of Lactobacillus rhamnosus strain CECT 8800, a probiotic for treatment of bacterial vaginosis
ERP014117Transcriptional profiling of human serotonergic neurons in vitro
ERP014118RNA-seq of C17.2 neuronal progenitor cells exposed to cerium oxide nanoparticles during cell differentiation
ERP014119Whole-genome sequencing of the primary tumour and multiple metastases of a single colorectal cancer patient.
ERP014120DNA barcoding the flora of Kuwait
ERP014121Rhizosphere and cyst microbiome in suppressive soils
ERP014122effect of different forage source based diet on mRNAs and miRNAs expression of five key organ in dairy cows
ERP014123Effective reduction of enteric methane production with extracts of Perilla seeds by changing the bacterial phenotype in rumen cultures
ERP014124Bacillus circulans strain ATCC21656
ERP014125Effective reduction of enteric methane production with extracts of Perilla seeds by changing the archaeal phenotype in rumen cultures
ERP014126Epidemiologic information is key when interpreting whole genome sequence data – lessons learned from the genomic analysis of the largest German Legionella pneumophila outbreak (Warstein, 2013)
ERP014127Multi-locus Analyses Reveal Four Giraffe Species Instead of One
ERP014128TP53 and TP63 modulation of Squamous PDAC
ERP014129Investigation of P. acnes levels in NGS data from cancer samples
ERP014133Sequencing of different Actinoplanes sp. SE50/110 mutants
ERP014134Expression profiles of chemically mutagenized haploid embryonic stem cells
ERP014135Barley landrace SBCC073 DSN normalization and RNAseq with Roche 454 GS-FLX and Illumina GAIIx
ERP014136A study on rhizosphere bacterial community succession along a glacier chronosequence
ERP014138Changes of ruminal epimural bacteria before, during and after long-term diet induced persistent subacute rumen acidosis
ERP014139RNA/cDNA Hybrid RNA Virus Sequencing
ERP014140Desert farming benefits from microbial potential in arid soils and promotes diversity and plant health
ERP014144Fungal communities of subsurface limestone aquifers in Hainich CZE, Germany
ERP014145Whole-exome sequencing of a patient with severe and complex hemostatic abnormalities reveals a pathogenic frameshift mutation in C3AR1
ERP014146Biopesticide impact on endophytic communities
ERP014147Metabolite and transcriptome analysis of an Australian eremohila plant and its correlation to antibacterial effects
ERP014148Long Fragment enrichment
ERP014151ChIP-Seq MyT1-HA in NS5
ERP014152root fungal microbiome of Agrostis stolonifera from a french peatland
ERP014154Selection of fungi by candidate cover crop species
ERP014155Oesophageal adenocarcinoma exome sequence data from samples before and after neo-adjuvant chemotherapy
ERP014156WGS for Bacillus circulans strain ATCC 31805
ERP014158metagenomic study of ruminal
ERP014161Plasmids of E. coli isolated from dairy cattle in the UK
ERP014162Cancer associated fibroblasts (CAFs) are activated in cutaneous basal cell carcinoma and in the peritumoral skin
ERP014163Pramel7 mediates naïve pluripotency through proteasomal-epigenetic combined pathways
ERP014167Gut microbiota of 10 pairs of Chinese infant twins
ERP014169Genetic analysis of bog wood samples
ERP014170Targeted NGS of circulating tumor DNA by Ion AmpliSeq Colon and Lung Cancer Panel v2
ERP014174Providencia heimbachae genome
ERP014176RNA-seq analysis of mouse (C57/B6) small intestinal tissue after Porcupine Inhibitor treatment or vehicle control.
ERP014177Metatranscriptome and metagenome of Bathymodiolus azoricus
ERP014178Differential abundance affect fungal communities structure and composition in Amazonian Dark Earth and black carbon particles
ERP014179Ammonia oxidising Bacteria
ERP014182Nuclear genome sequences of Plasmodium ovale curtisi.
ERP014183Nuclear genome sequences of Plasmodium ovale wallikeri.
ERP014184Genome-scale comparison of expanded gene families in Plasmodium malariae with other Plasmodium species
ERP014186Whole genome sequencing of Grimontia marina CECT 8713, type strain
ERP014187Whole genome secuencing of Grimontia sp. CECT 9029
ERP014188MARC P2a-Lab5-R3
ERP014189MARC P2a-Lab5-R4
ERP014190Genome sequencing of Thermogladius shockii gen. nov., sp. nov., a hyperthermophilic crenarchaeote from Yellowstone National Park, USA.
ERP014191High-Throughput Microdissection for Next-Generation Sequencing
ERP014192Phylogeny of Brachypodium distachyon complex based on chloroplast genomes assembled from whole genome sequence reads
ERP014193Multispecies Outcomes of Sympatric Speciation after Admixture with the Source Population in Two Radiations of Nicaraguan Crater Lake Cichlids
ERP014197Draft genome sequence of Frankia sp. Dg2
ERP014198Global DNA methylation profiling reveals new insights into epigenetically deregulated protein coding and long noncoding RNAs in CLL
ERP014199Diarrhea sample
ERP014200Linkage analysis and exome/WGS sequencing in a pedigree with developmental dyslexia
ERP014201Genome sequence
ERP014202genome sequence
ERP014203Culturomics study of the human gut
ERP014207Geologic and Hydrologic Controls on the Distribution, Diversity, and Activity of Subsurface Microbial Life Hosted in Gabbros and Peridotites in the Samail Ophiolite, Oman
ERP014211Rapid Discovery of De Novo Deleterious Mutations in Cattle Using Genome Sequence Data: Enhancing the Value of Farm Animals as Model Species
ERP014212'Comparative genomic and physiological analysis of Trichococcus species .'
ERP014214'Comparative genomic and physiological analysis of Trichococcus species .'
ERP014215'Comparative genomic and physiological analysis of Trichococcus species .'
ERP014216'Comparative genomic and physiological analysis of Trichococcus species .'
ERP014217'Comparative genomic and physiological analysis of Trichococcus species .'
ERP014218'Comparative genomic and physiological analysis of Trichococcus species .'
ERP014220Under expression of chemosensory genes in domiciliary bugs of the Chagas disease vector Triatoma brasiliensis
ERP014221to be completed
ERP014223DNA methylation profiling of human naive embryonic stem cells
ERP014226Investigating the Role of the Large Plasmids found in Peptoclostridium difficile
ERP014227Elevation gradient in Ordesa Monte Perdido Microbial Observatory to study the effect of climate on soil microbial community structure
ERP014228Sequences produced using indexed (tagged, barcoded) primers in single and double PCR.
ERP014230metagenomics study about microbial diversity
ERP014234Amplicon sequencing of four biogas plants
ERP014236We use single-cell derived xenografts to study the expansion of tumours in vivo and performed whole-exome sequencing to determine the underlying evolutionary dynamics.
ERP014237Whole genome-based epidemiological surveillance of Listeria monocytogenes in France
ERP014238Sequencing of an artificial insemination bull with a tail stump sperm defect for the identification of the underlying mutation
ERP014239Illumina paired end short read sequence dataset from Heliconius numata individuals.
ERP014240454 sequencing of 16S rRNA and 28S rRNA of Mycale grandis symbionts
ERP014241Effects of land cover conversion on soil bacterial communities in an alpine meadow on the Tibetan Plateau
ERP014242Complete genome sequence of Enterococcus faecium ATCC 700221 using PacBio corrrected by Illumina short reads.
ERP014243Comparative genomics of Vibrio fischeri populations sampled from Hawaii.
ERP014244New regulatory pathways activated by the stringent response in antimicrobial resistance
ERP014247Transcriptional profiling of human naive embryonic stem cells
ERP014252MeDIP profiling by high-throughput sequencing of Primary Human Hepatocytes (PHH) exposed to Valproic Acid (VPA) for 5 days daily and 5 days daily exposure followed by 3 days washout.
ERP014253Chloroplast and mitochondrial genome of Botryococcus braunii Showa
ERP014254Bacterial community diversity harboured by interacting species
ERP014255Somatic embryogenesis in Norway spruce (Picea abies L. Karst): Developmental regulation of germination and conversion of
ERP014256The genome assembly and annotation of Klebsiella pneumoniae RH201207
ERP014257Comparative genomics of multidrug resistant Acinetobacter baumannii clinical isolates reveals genome plasticity and polyclonal dissemination in Recife-Brazil
ERP014258Studing of human biliary microbiota in case of Opisthorchis felineus infection
ERP014259To address the need for understanding ITH in CRC comprehensively and accurately, we used targeted deep next-generation sequencing of 799 genes to characterize the genetic profiles of four CRCs, followed by validation with ultra-high-depth amplicon sequencing. We also performed NanoString gene expression profiling and NanoString cancer copy number analysis.