AccessionTitle or Alias
ERP016002Transcriptome_profiling_of_zebrafish_actin_prl3_1_transgenic_embryos
ERP016003Origins of MLL cancer stem cells govern leukemic self-renewal mediated by B-catenin and Hoxa9
ERP016004Population genomic study of Dothistroma septosporum in the UK
ERP016005Methanotrophic denitrification was studied in sequencing batch reactors (SBR) with biomass immobilized in polyurethane foams. The reactors were inoculated with a blend of marine and mangrove sediments (Sed-SBR) and anaerobic sludge (AnS-SBR) under anoxic condition. Methane was provided as the only external electron acceptor and carbon source.
ERP016006cotton centromere study using ChIP-seq
ERP016007Genome guided assembly of a F. verticilloides strain after 20 subculturing cycles
ERP016008Dietary silver nanoparticles can disturb the gut microbiota in mice
ERP016009Population genomic analyses were used to identify the potential source of an outbreak of wheat blast in Bangladesh.
ERP016010Genome_wide_comparison_of_Ethiopian_Leishmania_donovani_strains_
ERP016012Biogas production
ERP016013Metagenomics does not detect differences in microbial DNA content in the plasma of ME/CFS patients compared to controls
ERP016014Characterisation of multidrug-resistant Shiga toxin-producing Escherichia coli cultured from pigs in China: co-occurrence of extended spectrum ß-lactamase and mcr-1 encoding genes on plasmids
ERP016015Complete genome sequence of a potentially probiotic Lactobacillus pentosus MP-10 isolated from fermented Aloreña table olives
ERP016016Temporal variations of soil prokaryotic community and activity under different pH
ERP016017Genomewide SNP variation reveals relationships among landraces and modern varieties of rice
ERP016019Characterisation of multidrug-resistant Shiga toxin-producing Escherichia coli cultured from pigs in China: co-occurrence of extended spectrum ß-lactamase and mcr-1 encoding genes on plasmids
ERP016020Draft whole genome sequence of Klebsiella pneumoniae bacteriophage CS-34 isolated from raw sewage
ERP016021Refutation: Structure and mechanism of the essential two-component signal-transduction system WalKR in Staphylococcus aureus.
ERP016022test
ERP016024Oral microbiome samples from the Philippines
ERP016025Transcriptome_Analysis_of_KO_cell_lines
ERP016026Genomic diversity and introgression in O. sativa reveal the impact of domestication and breeding on the rice genome
ERP016027The choreography of the chemical defensome response to insecticide stress in Anopheles stephensi larvae
ERP016028Fate and persistence of a pathogenic NDM-1-positive Escherichia coli strain in anaerobic and aerobic sludge microcosms
ERP016029Characterization of the bacterial, archaeal and fungal communities on carbon steel surfaces from an industrial cooling system.
ERP016030Fungal communities of soils from alpine and subalpine plants
ERP016031Gene expression of IKK1/2 deficient thymocytes
ERP016032RNA-Seq of wild type E. coli MG1655 versus those with a deletion in the hns gene (Histone-like protein H-NS)
ERP016033The genome sequences of Plasmodium ovale and Plasmodium malariae
ERP016034Testing human and food samples for Noroviruses
ERP016035Functional implications of miR-19 in the migration of newborn neurons in the adult brain
ERP016036Two classes of L1-associated somatic variants in human brain - RNA-Seq
ERP016037Two classes of L1-associated somatic variants in human brain - WGS
ERP016038Targeted sequence capture of Aegilops sharonensis 4Ssh introgression segments in wheat
ERP0160395’-Hydroxymethylcytosine Precedes Loss of CpG Methylation in Enhancers and Genes Undergoing Activation in Cardiomyocyte Maturation
ERP016040Rice drought resistance1
ERP016042Mutations in ppe38 block PE_PGRS secretion and cause hypervirulence in Mycobacterium tuberculosis
ERP016045Genomic insights reveal a shared demographic history of differentiated Atlantic and Indo-Pacific yellowfin tuna (Thunnus albacares) populations
ERP016046Temperature dependent RNA secondary structure in Trypanosoma brucei
ERP016047Temperature dependent RNA secondary structure in Trypanosoma brucei
ERP016048Diversity and functionality of wood-tar degrading microbial consortia
ERP016049This study includes development of an MLST scheme based on analysis of M. hominis genomic sequences to derive the minimum number of genes required to accurately reflect genomic phylogeny.
ERP016050Crop establishment practices are a driver of the plant microbiota in winter oilseed rape (Brassica napus)
ERP016051Rhizosphere microbiome of common bean resistant to the soil borne pathogen Fusarium oxysporum
ERP016053Thiss study includes development of an MLST scheme based on analysis of M. hominis genomic sequences to derive the minimum number of genes required to accurately reflect genomic phylogeny.
ERP0160544C and Capture-C in HCT116, NCM460 cells and colon tissue
ERP016055Effect of Bacillus subtilis and Bacillus licheniformis supplementation in diets with low- and high-protein content on ileal crude protein and amino acid digestibility and intestinal microbiota composition of growing pigs
ERP016056Biallelic inactivation of REV7/MAD2L2 in Fanconi anemia
ERP016057Principle of DNA Double Strand Breaks clustering revealed by Capture-HiC
ERP016058My short descrtiptive title for the study
ERP016059Draft genome sequence of Aquimarina sp. strain EL33 isolated from the temperate soft coral Eunicella labiata
ERP016060EIF2S2 retroposition underlies fleece variation in sheep through the formation of dsRNA
ERP016061Mutational_signature_of_psoralen_exposure_
ERP016062All compounded samples
ERP016063Daisy Lake Shotgun
ERP016064Anatomic specialization of synovial fibroblasts – integrating positional stromal signatures with joint specific pathways in arthritis.
ERP016065Genome variation and meiotic recombination in Plasmodium falciparum: insights from deep sequencing of genetic crosses
ERP016067Streptomyces sp. OspMP-M45
ERP016068Streptomyces sp. MnatMP-M77
ERP016069Streptomyces sp. Ncost-T6T-1
ERP016070Streptomyces sp. SceaMP-e96
ERP016071Streptomyces sp. LamerLS-316
ERP016072Streptomyces sp. AmelKG-A3
ERP016073Streptomyces sp. AmelKG-E11A
ERP016074Streptomyces sp. ScaeMP-e48
ERP016075Streptomyces sp. LaPpAH-199
ERP016076Streptomyces sp. AmelKG-D3
ERP016077Streptomyces sp. WMMB 322
ERP016078Streptomyces sp. WMMB 714
ERP016079Pseudogulbenkiania sp. lig4
ERP016080Variovorax sp. HW608
ERP016081Micromonospora humi DSM 45647
ERP016082Is genotyping of single isolates sufficient for population structure analysis of Pseudomonas aeruginosa in cystic fibrosis airways?
ERP016085Population genomics of Trypanosoma cruzi DTU-I clade from different locations of America
ERP016086Aim of this project was to sequence plant-associated bacteria genomes showing plant-growth promotion properties and elevated heavy-metal resistance phenotypes to 1) devise better molecular screen for such strains 2) use these for bioaugmentation of marginal lands contaminated by heavy-metals.
ERP016087Exome capture sequencing of 96 winter and spring barley cultivars for the analysis of genome-wide haplotype diversity
ERP016088Isoform sequencing of barley (Hordeum vulgare), using the reference cultivar 'Morex'.
ERP016089TNF induced gene expression in CD8 single positive thymocytes
ERP016095ZF_kdm2aa_mut_whole_exome_enrichment
ERP016096Up and down regulation of PhoE modulate the carbapenem resistance of Klebsiella pneumoniae clinical isolates with inactivated OmpK porins
ERP016097The genetic structure of the world’s first farmers
ERP016099MCF7_Mimic
ERP016100We studied plasmid-host adaptation of clinical specimen
ERP016102CRC Survivors were supplemented with heat-stabilized rice bran or cooked navy bean powder for 28 days and stool microbiota and metabolites were analyzed.
ERP016103Patterns of microbiome transition along salinity gradients, and importance for fish host adaptive divergence across osmotic boundaries.
ERP016104Micromonospora citrea DSM 43903
ERP016105Micromonospora inositola DSM 43819
ERP016106Micromonospora halophytica DSM 43171
ERP016107Micromonospora auratinigra DSM 45487
ERP016108Micromonospora coxensis DSM 45161
ERP016109Micromonospora siamensis DSM 45097
ERP016110Micromonospora rifamycinica DSM 44983
ERP016111Micromonospora zamorensis DSM 45600
ERP016112Micromonospora eburnea DSM 44814
ERP016113Micromonospora pallida DSM 43817
ERP016114Micromonospora echinaurantiaca DSM 43904
ERP016115A cytosolic Ezh1 isoform modulates PRC2-Ezh1 repressive function as adaptive epigenetic response in post-mitotic cells
ERP016116Bacterial colonization and succession in a newly opened hospital
ERP016118Danish L. monocytogenes cases years 2002-14
ERP016119Pollen microbiota 2015, first run
ERP016120Draft genome sequence of Xanthomonas bromi type strain LMG 947
ERP016121Molecular tracking of Mycobacterium caprae circulation and intra-herd spread in cattle
ERP016122Satellite DNA and Transposable Elements in Seabuckthorn (Hippophae rhamnoides), a Dioecious Plant with Small Y and Large X Chromosomes
ERP016123Genome variation and meiotic recombination in Plasmodium falciparum: insights from deep sequencing of genetic crosses
ERP016124Treponema pallidum pertenue found in wild sooty mangabey (Cercocebus atys)genital lesions in Tai National Park, Ivory Coast.
ERP016125Whole-genome resequencing of suppressor mutants in Escherichia coli
ERP016126Microbial processes in iron-rich sediments of Lake Towuti, Indonesia: Disentangling the methane and iron cycles
ERP016127ECAUB_miRNA
ERP016128The effect of conditional activation of ROCK1 or ROCK2 in mouse pancreatic ductal adenocarcinoma cells was examined by RNA sequencing.
ERP016129Pollen microbiota 2015, second run
ERP016130Streptomyces sp. DI166 Genome sequencing and assembly
ERP016131Gut microbiota of phyllostomid bats that span a breadth of diets
ERP016133A large deletion in RPGR causes XLPRA in Weimaraner dogs
ERP016134metagenomic Shotgun analysis of cecum microbiome of poultry
ERP016135Gene assemblies to support species level phylogeny within the andropogoneae
ERP016136Schistosoma_mansoni_sex_specific_genome_sequencing
ERP016137Postglacial viability and colonization in North America's ice-free corridor
ERP016138The use of random forests modelling to predict mannan sensitive bacteria in the broiler caecum
ERP016139P. aeruginosa phages PCYII10
ERP016140Epidemiology_of_Cryptosporidium_in_Scotland
ERP016141Draft Genome Sequence of the Probiotic Enterococcus faecalis Symbioflor 1 Clones DSM 16430 and 16434
ERP016142Sequencing of phage 3P1
ERP016144The Nrd1-like protein Seb1 coordinates co-transcriptional 3’ end processing and polyadenylation site selection
ERP016145Deciphering the transcriptional response mediated by the redox-sensing system HbpS-SenS-SenR from streptomycetes
ERP016146Onboarding prokaryotic transcriptional activators as metabolite biosensors in yeast
ERP016147Transcript profiling of plants ectopically expressing DOF5.4 / OBF BINDING PROTEIN 4 (OBP4).
ERP016148Palaeoproteomic evidence identifies archaic hominins associated with the Châtelperronian at the Grotte du Renne
ERP016149Micromonospora krabiensis DSM 45344
ERP016150Micromonospora echinofusca DSM 43913
ERP016151Streptomyces sp. LcepLS Genome sequencing and assembly
ERP016152Micromonospora chokoriensis DSM 45160
ERP016153Micromonospora coriariae DSM 44875
ERP016154Micromonospora chersina DSM 44151
ERP016155ENDOTHELIAL INHIBITION OF THE GLYCOLYTIC ACTIVATOR PFKFB3 INDUCES TUMOR VESSEL NORMALIZATION, IMPAIRS METASTASIS AND IMPROVES CHEMOTHERAPY
ERP016156Micromonospora inyonensis DSM 46123
ERP016157Micromonospora purpureochromogenes DSM 43821
ERP016158Micromonospora rhizosphaerae DSM 45431
ERP016159Micromonospora chaiyaphumensis DSM 45246
ERP016160Micromonospora echinospora DSM 43816
ERP016161Micromonospora carbonacea DSM 43168
ERP016162Micromonospora viridifaciens DSM 43909
ERP016163Micromonospora peucetia DSM 43363
ERP016164Micromonospora matsumotoense DSM 44100
ERP016165Micromonospora mirobrigensis DSM 44830
ERP016166Micromonospora saelicesensis DSM 44871
ERP016167Micromonospora yangpuensis DSM 45577
ERP016168Micromonospora tulbaghiae DSM 45142
ERP016169Micromonospora nigra DSM 43818
ERP016170Micromonospora haikouensis DSM 45626
ERP016171Micromonospora marina DSM 45555
ERP016172Wine waste resource recovery with a reactor microbiome: n-caprylate and n-caproate production from wine lees
ERP016173Antibiotics, birth mode, and diet shape microbiome maturation during early life
ERP016174The role of social connectivity in gut microbial transmission and consequences for pathogen defense
ERP016175Identification of sentinels bacterium by correlation of heavy metals in the microbiome, on mangrove sediments from the north-west coast of South America.
ERP016176Real-time species typing and analysis of antibiotic resistance potential using Nanopore MinION sequencing
ERP016178Bacterial diversity in various environments such as cultivated soil, alpine soil, semi-arid soil
ERP016179Effects of developmental temperature on microbiome in Drosophila Melanogaster
ERP016180Oral and nasal microbiome in Parkinson's disease
ERP016182Sequencing of an Streptococcus suis isolate from a human patient
ERP016183Metagenome and metatranscriptome profiling of moderate and severe COPD sputum in Taiwanese Han males
ERP016185Butyricimonas timonensis genome
ERP016186Culturomica massiliensis genome
ERP016187Clostridium mediterraneense genome
ERP016188Duplications and positive selection drive the evolution of parasitism associated gene families in the nematode Strongyloides papillosus
ERP016190Genome sequencing and population genomics of silver birch (Betula Pendula)
ERP016191Metagenome of "hand-picked" Achromatium cells from Lake Stechlin, NE, Germany
ERP016192Intrinsic transcriptional heterogeneity in B cells controls early class switching to IgE
ERP016193Syphacia obvelata from Mus musculus domesticus
ERP016194Syphacia obvelata from Mus musculus musculus
ERP016196MODER: Efficient discovery of the modular structure of monomeric and dimeric transcription factor binding motifs
ERP016197Evaluation of MBR system as post-treatment in WWTP for improved micropollutant removal
ERP016198Rapid identification of bovine MHCI haplotypes in genetically divergent cattle populations Using Next-Generation Sequencing
ERP016200Rapid detection and comparative genome analysis of Legionella pneumophila sg1 ST47
ERP016201Using carrion flies to assess mammalian biodiversity in the tropics.
ERP016202Streptomyces sp. DvalAA-43 Genome sequencing and assembly
ERP016203Streptomyces sp. DpondAA-F4a Genome sequencing and assembly
ERP016204Streptomyces sp. IgraMP-1 Genome sequencing and assembly
ERP016205Streptomyces sp. ScaeMP-6W Genome sequencing and assembly
ERP016206Streptomyces sp. di50b Genome sequencing and assembly
ERP016207Streptomyces sp. BpilaLS-43 Genome sequencing and assembly
ERP016208Streptomyces sp. DvalAA-14 Genome sequencing and assembly
ERP016209Streptomyces sp. DpondAA-D4 Genome sequencing and assembly
ERP016210Streptomyces sp. SolWspMP-5a-2
ERP016211Streptomyces sp. ScaeMP-e83 Genome sequencing and assembly
ERP016212Streptomyces sp. DvalAA-19 Genome sequencing and assembly
ERP016213Streptomyces sp. di188 Genome sequencing and assembly
ERP016214Streptomyces sp. SolWspMP-sol7th Genome sequencing and assembly
ERP016215Streptomyces sp. PalvLS-984 Genome sequencing and assembly
ERP016216Streptomyces sp. PpalLS-921 Genome sequencing and assembly
ERP016217Streptomyces sp. BvitLS-983 Genome sequencing and assembly
ERP016218Streptomyces sp. TverLS-915 Genome sequencing and assembly
ERP016219Streptomyces sp. DfronAA-171 Genome sequencing and assembly
ERP016220Streptomyces sp. Termitarium-T10T-6 Genome sequencing and assembly
ERP016221Streptomyces sp. Ncost-T10-10d Genome sequencing and assembly
ERP016222Streptomyces sp. DconLS Genome sequencing and assembly
ERP016223Streptomyces sp. LamerLS-31b Genome sequencing and assembly
ERP016224Streptomyces sp. Cmuel-A718b Genome sequencing and assembly
ERP016225Streptomyces sp. Ncost-T6T-2b Genome sequencing and assembly
ERP016226Streptomyces sp. MnatMP-M17 Genome sequencing and assembly
ERP016227Streptomyces sp. MnatMP-M27 Genome sequencing and assembly
ERP016228Streptomyces sp. OspMP-M43 Genome sequencing and assembly
ERP016229Oryza sativa has important syntenic relationships with the other cereal species and is a model plant for the grasses
ERP016230Genome assembly of a new magnetotactic bacterium belonging to the Rhodospirillales
ERP016233Open Chromatin Profiling of Differentiating Human Urothelium Reveals Heterarchy of Transcription Factors Driving Basal and Luminal Cell Phenotypes
ERP016235Temporal stability of gut microbiota in barn swallow
ERP016236Experimental evolution of ceftazidime resistance in MG1655 with and without TEM-1 on a plasmid or inserted into the chromosome.
ERP016237Germ line variants in cancer-related genes of early-onset South African breast cancer patients
ERP016238Improved Plasmodium vivax genomes
ERP016239Phylogenetic signal of salinity and season on bacterial community compositions in the salinity gradient of the Baltic Sea
ERP016240Genome-wide DNA methylation landscape defines specialization of regulatory T cells in tissues
ERP016241Complete genome sequence of Pseudomonas aeruginosa phages vB_PaeP_PcyII-10_P3P1 and vB_PaeM_PcyII-10_PII10A
ERP016242High-spatial-resolution transcriptome profiling reveals un-characterized regulatory complexity underlying cambial growth and wood formation in Populus tremula.
ERP016243Human Developmental Biology Resource (HDBR) expression resource-RNAseq
ERP016245Anatomic specialization of synovial fibroblasts – integrating positional stromal signatures with joint specific pathways in arthritis.
ERP016246Identification of a novel plasmid-mediated colistin resistant gene mcr-2 in E. coli
ERP016248Rapid adaptation drives invasion of airway donor microbiota by Pseudomonas after lung transplantation
ERP016249Complete genome of Methanobacterium curvum strain Buetzberg
ERP016250Whole_Genome_Sequence_Profiling_of_zebrafish_DNA_from_telomerase_knockout
ERP016252The oral and skin microbiomes of captive Komodo Dragons are significantly shared with their habitat.
ERP016253Regional heterogeneity and seasonal succession in proteorhodopsin containing marine microbial assemblages
ERP016254A structural variant in the 5’-flanking region of the TWIST2 gene affects melanocyte development in belted cattle
ERP016255Community analysis of massive cave biofilms of a former medicinal spring
ERP016257A structural variant in the 5’-flanking region of the TWIST2 gene affects melanocyte development in belted cattle
ERP016258By taking three metagenomic approaches to reveal the microplankton communities from composition to functional properties in this study. It should make a significant advance in understanding the impacts of human activities on ecosystem functions, from the angle of dam influences on the microbial functions.
ERP016259Population genomic of Rhynchosporium commune
ERP016261Identification of sympatric cryptic species of Aedes albopictus subgroup in Vietnam: new perspectives in phylosymbiosis of insect vector
ERP016262Rapid adaptation drives invasion of airway donor microbiota by Pseudomonas after lung transplantation
ERP016263Molecular-based evaluation of the influent and effluent microbial communities of membrane bioreactor (MBR) systems treating municipal wastewater
ERP016264Draft Genome Sequence of the Probiotic Enterococcus faecalis Symbioflor 1 Clones DSM 16430 and 16434
ERP016265Splicing factor 1 modulates dietary restriction and TORC1 pathway longevity in C. elegans
ERP016266Raineyella antarctica LZ-22
ERP016267Raw reads of 170 isolates of Bacillus cereus biovar anthracis (Bcbva) from Tai National Park, Côte d'Ivoire and eight Bcbva isolates from neighboring Grebo, Liberia
ERP016268Transcriptome profiling of DA neurons, human midbrain-like organoids and prenatal midbrain
ERP01626916s data marine community of L4 station
ERP016270Transcriptional profiling of murine small intestinal epithelial cells stimulated with interleukin-28A
ERP016271Impaired spermatogenesis, muscle and erythrocyte function in U12 intron splicing-defective Zrsr1 mutant mice
ERP016275Evaluating_new_methods_and_difficult_samples_for_insights_into_Anopheles_population_structure
ERP016276The Rhizoctonia solani transcriptome during interaction with the host plant Lactuca sativa
ERP016277This Project aims to determinate the microbial diversity of an eutrophic lagoon in Valladolid (Spain) through 4 amplicons libraries (16S for bacteria and archaea, 18S for eukaryote, and ITS for fungi).
ERP016278Genomic analysis of 495 vancomycin resistant Enterococcus faecium reveals broad dissemination of a vanA plasmid in more than 19 clones from Copenhagen, Denmark
ERP016279Transcriptomics of Catharanthus roseus upon challenge with Manduca sexta in local and distal leaves.
ERP016280Patterns in the skin microbiota differ in children and teenagers between rural and urban environments
ERP016281Insights into broilers’ gut microbiota fed with phosphorus, calcium and phytase supplemented diets
ERP016282Clinically-relevant gut microbial dysbiosis and hyperserotonemia in two mouse models of autism
ERP016283Characterization and genetic variation of Vibrio cholerae isolated from clinical and environmental sources in Thailand
ERP016285The gut microbiota distinguishes GI-healthy and -unhealthy captive colobineprimates - Hale folivorous primates (MiSeq)
ERP016286The gut microbiota distinguishes GI-healthy and -unhealthy captive colobineprimates
ERP016287Seyler North Atlantic water column
ERP016288Mungbean yellow mosaic India virus segment A
ERP016289Sequencing_of_the_gibbon_Y_chromosome
ERP016291Genome Assembly of T.cruzi Y strain
ERP016292Haplotype-resolved sweet potato genome traces back its hexaploidization history
ERP016293Deep-sequencing of distinct preparations of the live-attenuated VZV vaccine reveals a conserved core of attenuating SNPs
ERP016294A core phylogeny of Dictyostelia derived from 47 functionally divergent proteins retrieved from five existing and six newly sequenced genomes
ERP016296Reference testing - FVST, DTU, ENGAGE (E.coli, 2014-2015)
ERP016297metataxonomics analysis of fungal populations in Vitis vinifera L. cv. Corvina grapes and musts
ERP016299Saanich Inlet model
ERP016300Circulating tumor DNA to monitor first-line treatment in Non-Small Cell Lung Cancer patients, a prospective study using Base-Position Error Rate (BPER) analysis of Next-Generation Sequencing
ERP016301Whole genome shotgun sequencing of bacteria from the gut of juvenile and adult Bactrocera oleae from Crete and Israel
ERP016302Transcriptome data of the Musa acuminata genome sequencing project
ERP016303MOST:A modified MLST typing tool based on short read sequencing
ERP016305Host inherent variability influences the transcriptional response of Staphylococcus aureus during in vivo infection
ERP016306Molecular diversity patterns among various phytoplankton size-fractions in West Greenland in late summer
ERP016307A novel MITF variant in a white American Standardbred foal
ERP016309Trypanosoma brucei genome-wide RNAi library screen of methotrexate.
ERP016310complete genome of Enterococcus faecalis bacteriophage Idefix
ERP016311Trypanosoma brucei genome-wide RNAi library screen of raltitrexed
ERP016312Euprymna scolopes accessory nidamental gland and egg jelly coat bacterial communities
ERP016313Comparative genomics of the Daphnia pulex species complex
ERP016314daphnia pulex genome (PA42)
ERP016317Genome sequencing of Neoscytalidium dimidiatum UM 880 by Illumina Sequencing Platform
ERP016318Whole_Genome_sequencing_of_Vibro_cholerae_isolates_from_Bangladesh
ERP016319Eisenbergiella massiliensis genome
ERP016320A_PiggyBac_transposon_screen_in_pancreatic_cancer
ERP016321RNA_Seq_of_zebrafish_neural_crest_mutants
ERP016322Effects of toothpaste containing enzymes and proteins on the ecology of the plaque oral microbiome
ERP016323Corynebacterium phoceensis genome
ERP016324Transcriptome data of the Musa acuminata genome sequencing project
ERP016327Variation in the gut microbiota of monozygotic twins is mirrored in their viromes
ERP016328Transcriptomes of the fish pathogen Flavobacterium psychrophilum in biofilm and planktonic growth conditions
ERP016329The gut microbiota distinguishes GI-healthy and -unhealthy captive colobineprimates - Hale folivorous primates (HiSeq)
ERP016330Genomic characterization of the Atlantic cod sex-locus
ERP016331Whole-genome sequencing of mouse recombinant inbred lines from the Collaborative Cross panel.
ERP016332Parkinson’s disease and therapeutic modalities have distinct signatures on the gut microbiome
ERP016333The Demographic Development of the First Farmers and Their Expansion in Anatolia and Beyond
ERP016335HipSci___Deep_Exome_sequencing___healthy_volunteers
ERP016337Trim24 knock down in the 2i-state of the mouse ES cells
ERP016338Functional and taxonomic profiling of microbial communities in caves of the Algarve, Southern Portugal.
ERP016339Ammonium influences microbial community composition in anaerobic digestion of swine manure
ERP016340Ammonium influences microbial community composition in anaerobic digestion of swine manure
ERP016341Klebsiella phage PMBT1
ERP016342Raw variant calls from the Sheep genomes project
ERP016343High quality variant calls from the Sheep genomes project
ERP016344WGS of frog isolate Brucella sp. 10RB9215
ERP016345Phylogenomic analysis of the complete sequence of a gastroenteritis-associated cetacean adenovirus (bottlenose dolphin adenovirus 1) reveals a high degree of genetic divergence
ERP016347RNASeq of musculoskeletal ageing using human mesenchymal stem cells and their tissue constructs
ERP016348TCC in pluripotent and differentiated cells
ERP016350MRSA_clinical_sample_sequencing
ERP016351Transcriptomic analyses of adipocyte differentiation from human mesenchymal stromal-cells (MSC)
ERP016352Clostridium septicum genome
ERP016354Illumina Miseq genome sequencing of three Lactobacillus plantarum strains isolated from dairy products by CREA-FLC(Italy)
ERP016355Study of Natural Miltefosine-Resistance Mechanism in Leishmania (L.) chagasi Isolates from Visceral Leishmaniasis Patients with Different Treatment Outcomes
ERP016356S__mansoni_male_and_female_adult_worm_reproductive_organs_pre__and_post_pairing
ERP016357Antibiotic-mediated gut microbiome perturbation accelerates development of type 1 diabetes in NOD mice
ERP016358Clayton wild Vietnamese douc langurs
ERP016361The_role_of_the_receptors_of_IL_10_superfamily_members_on_epithelial_cells_during_whipworm_infection_and_immunity
ERP016362Mycobacterium_abscessus_RNA_sequencing
ERP016364DNA damage-induced histone loss increases chromatin mobility facilitating repair
ERP016368Daily cycle of bacterial active community structure
ERP016370Emergence of resistance to tyrosine kinase inhibitors in non-small cell lung cancer can be delayed by an upfront combination with the HSP90 inhibitor onalespib
ERP016371Extensive transcriptome analysis identifies essential genes sustaining intestinal invasion by Entamoeba histolytica
ERP016372Evaluation of Rad-seq genotyping to identify loci under selection for guppies living in rivers heavily polluted with crude oil.
ERP016373Diversity and community composition of particle associated and free-living bacteria in the deep Southern Ocean
ERP016374RIP-seq analysis of Isw1 interacting transcripts
ERP016375The mid-Atlantic ridge shapes bacterioplankton communities in the abyssopelagic zone of the Atlantic Ocean
ERP016376Distribution patterns of soil microbial eukaryotes suggests widespread algivory by phagotrophic protists as an alternative pathway for nutrient cycling
ERP016377Whole-genome sequencing expands the mutational spectrum of autism with novel genes, causative CNVs and chromosomal rearrangements
ERP016378We generated a mouse model that allows conditional knock-out of the NADPH-P450 oxidoreductase (Por) gene, which is the only electron donor for all murine cytochromes and embryonic-lethal when deleted1. We introduced additional deletions in the conditional Porc/c mouse to generate a PIRF (Porc/c /Il2rg-/- /Rag2-/-/Fah-/-) strain. These data compare expression profiles in the resulting tissues.
ERP016379Chlamydia single-cell genomes from marine environments
ERP016380Identification of Campylobacter jejuni genes implicated in pig infection by Tn-seq.
ERP016381Whole genome sequencing of emerging multidrug resistant Candida auris isolates in India demonstrates low genetic variation.
ERP016382Study of the changes in the metagenome of the groundwater community at
ERP016383Prenatal overexposure to the synthetic glucocorticoid dexamethasone (Dex) in rats reduces birthweight in the first generation (F1) and second generation (F2), including through the male line. We hypothesised that the mechanism for this would likely be epigentic perturbations in the male germline. DNA methylation profiling of F1 male germ cells at E19.5 and small RNA expression and Chromatin Immunoprecipitation (ChIP) sequencing for H3K4me1, H3K4me3, H3K27me3 and H3K9me3 on F1 sperm were used to test this hypothesis. No differences in DNA methylation, histone modifications or small RNA expression were observed, suggesting non-epigentic mechanisms may be responsible for the transmission of programmed effects in this model.
ERP016384Gut microbiome of hibernating bears
ERP016385A multi-tissue RNA-seq and transcriptome analysis of the shark Squalus acanthias.
ERP016386Lactobacillus reuteri L6798 genome
ERP016387New Insights into the Cyclic Di-adenosine Monophosphate (c-di-AMP) Degradation Pathway and the Requirement of the Cyclic Dinucleotide for Acid Stress Resistance in Staphylococcus aureus
ERP016389RNA-seq of a Streptococcus suis serotype 2 strain incubated in porcine blood and cerebrospinal fluid
ERP016390CYANIDE SOIL STUDY
ERP016391TLR5 instructs intestinal B cell responses through regulation of flagellin in the gut
ERP016392Beach sand microbiome from Calvert Island Canada
ERP016393In-solution capture of 1.2 million SNP targets from ancient humans associated with the Lapita culture of Remote Oceania and Polynesia.
ERP016395Brazelton LostCity chimney biofilm
ERP016396TLR5 instructs intestinal B cell responses through regulation of flagellin in the gut
ERP016397Analysis of human inferior turbinate microbiota
ERP016398Complementary spatial pattern of phenanthrene-degrading bacteria along a fine scale rhizosphere gradient
ERP016399Complete genome sequence of Enterococcus faecium Ef_aus0233
ERP016400Arboreal adaptation and venom evolution in Australian funnel-web spiders
ERP016401VNB Cng
ERP016402The diversity and viability of preserved bacteria in 24 long desiccated historical soils
ERP016403Ancient DNA from Portugal (Neolithic and Bronze Age)
ERP016404RNA-Seq of Caenorhabditis elegans Mi2-depleted embryos at 24- and 100-cell stages
ERP016405Catchment sources of microbes
ERP016406BCL11A_associated_intellectual_disability
ERP016407Functional redundancy in peat microbial community after 18-years of in situ experimental manipulations mimicking climate warming and increased nutrient deposition
ERP016409RNA-seq of whole blood samples from human visceral leishmaniasis compared to samples from healthy uninfected controls
ERP016411Additional sequencing coverage for the study by Jolma et al 2013, “DNA-binding specificities of human Transcription factors. This new deeper sequencing data has been used in the publication "Transcription factor family-specific DNA shape readout revealed by quantitative specificity models”
ERP016412Diversity of carbonate deposits and basement rocks in continental and marine serpentinite seeps.
ERP016413Molecular analysis of the complete genomes of apricot and plum isolates of Plum pox virus detected in a Prunus germplasm collection in Almaty’s Pomological Gardens, Kazakhstan
ERP016414Garcia bird gut microbiome
ERP016415Integrative and comparative genomics identifies the tyrosine kinase FES as a key melanoma tumor supppressor: WES
ERP016416Viral communities associated with algal/coral interactions
ERP016417Integrative and comparative genomics identifies the tyrosine kinase FES as a key melanoma tumor supppressor: WGS
ERP016418Transcriptome analysis of HUVEC
ERP016419Urbanization impacts nitrogen cycling and alters the microbial community composition in soils
ERP016420Off targets for Metabolic pathway reprogramming by CRISPR genomeEditing
ERP016422Population genomics of Legionellosis Linked to Growing Media Samples reveals hidden complexities of source attribution
ERP016423Bacterial biogeography of pika gastrointestinal tract
ERP016424Diet influences the composition and diversity of mucosa-associated microbiota along the longitudinal axis of the pig gastrointestinal tract.
ERP016425Genome sequence of Desulfamplus magnetomortis
ERP016426Biofilm formation on eight polymer material surfaces
ERP016427Genome sequence of Staphylococcus aureus LAC* used as background control strain
ERP016428Impact of aging on cell-to-cell transcriptional variability during immune stimulation
ERP016429RNA-Seq in liver of Tc1 mice carrying human chromosome 21 passaged through either the female or male germline
ERP016431Divergent evolution peaks under intermediate population bottlenecks during bacterial experimental evolution
ERP016432Pithovirus massiliensis genome
ERP016433RNA-seq of sh2-H2AFJ and sh-NoTarget in WI-38hTERT cells induced into senescence by etoposide
ERP016434Metagenomic study of composts produced onfarm
ERP016435Transcriptome analysis of neuronal cells infected with tick-borne encephalitis virus reveals strong induction of host response-associated genes that exclude type I and II IFNs
ERP016437BioCAP-Seq analysis of human chromosome 21 after its passage through either the mouse male germline
ERP016440A Pseudomonas aeruginosa AUST-02 strain sub-type (M3L7) has emerged in Australia, infects the lungs of some people with cystic fibrosis (CF) and is associated with antibiotic resistance. Whole genome sequencing (WGS) was principally used to investigate short-term within-host diversity and antibiotic resistance of M3L7 chronically infecting the CF lungs.
ERP016441clear cell renal cell carcinoma (ccRCC) whole exome sequencing tumor-normal biopsy pair
ERP016443Complete Genome Assembly and Comparative Genomic of Yeast Strains using the MinION device
ERP016444Alternative Substrates for methylotrophic Microorganisms
ERP016445Genome sequencing of sentivity mycobacterium tuberculosis MTB1_M(Morocco)
ERP016446Genome Sequences of Multiresistant Mycobacterium Tuberculosis MTB2_M(Morocco)
ERP016447Genome Sequences of Multiresistant Mycobacterium Tuberculosis MTB13_M(Morocco)
ERP016448Swiss Comparative Equine Resequencing (SCER)
ERP016449Characterization of the nasopharyngeal microbiota of patients with viral respiratory infection reveals enrichment in pathogenic bacteria and a decrease of Diversity.
ERP016450Whole genome analysis of an Australian AUST-02 strain sublineage associated with increased multi-drug resistance, isolated from patients attending a cystic fibrosis centre in Brisbane.
ERP016451Ercolini whole grain feces
ERP016452Metagenomics of the micro biome of the jellyfish Cotylorhiza tubercular and the description of three new candidate taxa
ERP016453The Role of the Microbiome in Alcoholic Liver Disease
ERP016454Genome sequencing of the gammaproteobacterial ectosymbiont of Laxus oneistus (Nematoda; Stilbonematinae) from single nematodes
ERP016455Bird Egg Shells from Spain
ERP016456Rhizospheric communities of Desert plants
ERP016457The evolutionary conserved transcription factor Sp1 controls appendage growth through Notch signaling
ERP016459Mouse_somatic_mutations_in_normal_tissue___part_II
ERP016460iCLIP of TDP-43
ERP016461BRCC R. collo-cygni and barley RNA expression
ERP016462Small RNA and total RNA sequencing of C. elegans with mutations in the hrde-1 and emb-4 genes
ERP016464Bergen Ocean Acidification Mesocosms
ERP016465Genome sequence of Lassa virus isolated from the first domestically acquired case in Germany
ERP016466Spirito monensin cow hindgut
ERP016467Robustness and microbial diversity of a Fluidized Bed Reactor (FBR) employed to treat diluted laundry wastewater without supplementary feeding
ERP016468Gibbons tongue river 16S
ERP016469Peralta starlings
ERP016470Genome sequence of bacteriophage HM2, a lytic phage for solventogenic Clostridium
ERP016471Dissecting microbial community structure and acidogenic fermentation pathways of rumen microorganisms fermenting office paper under mesophilic and thermophilic temperatures by massive sequencing
ERP016472Puerto Rico and Plantanal
ERP016473Regulation by Hfq in Photorhabdus
ERP016474Transcriptome_profiling_of_zebrafish_polyA_RNA_seq_in_SL4_06_F3_multiallelic_knockout
ERP016475Rapid High-Resolution Functional Mapping of Yeast Genomes by Saturated Transposition
ERP016476Root transcriptome profiling in chilling-sensitive tomato (S. lycopersicum cv. Moneymaker) and the more cold-tolerant wild tomato S. habrochaites LA1777 compared at optimal and suboptimal temperature.
ERP016477Genomic insight into mechanisms of reversion of antibiotic resistance in multidrug resistant Mycobacterium tuberculosis induced by the nanomolecular iodine-containing complex FS-1
ERP016478Leveraging cell type-specific regulatory regions to detect SNPs associated with tissue factor pathway inhibitor plasma levels
ERP016479In situ Hi-C study of chromatin conformation during early Drosophila development
ERP016480CLIP-seq of Trypanosoma brucei cells in procyclic stages to investigate transcriptome wide mapping of MRB8170 and MRB4160
ERP016481Sequence data from Neolithic (7,700BP) hunter-gatherer samples from Devil's Gate, East Asia.
ERP016482Freshwater shotgun metagenome from the surface of Nakdong River during algal bloom, Busan, South Korea
ERP016483Ezenwa Cape Buffalo
ERP016484MCF10A cells expressing GATA3 mutants
ERP016486Impact of the Sample Type and DNA Isolation Procedure on Genomic Inference of Microbiome Composition
ERP016487The_transcriptomic_effect_of_brain_specific_allelic_imbalance_of_Trappc9
ERP016488WGS of ST8 S. aureus to eludicate the origin and evolution of African isolates
ERP0164897,700 year-old, low coverage (<0.1X in total) early Neolithic genomes from the Devil's Gate Cave in the Russian Far East.
ERP016491Song whitehead bats
ERP016492Great Lake Microbiome
ERP016493Sequencing of bacteriophage of vB_Eco_slurp01
ERP016494Plasmidomes of aerobic biofilm under long-term oxytetracycline exposure
ERP016495Song Colorado freshwater fish
ERP016496Biodiversity and Functional Patterns of Microbial Assemblages in Postglacial Pond Sediment Profiles
ERP016497System-level response to long-term irrigation in a drought-stressed pine forest
ERP016499Different microbiomes associated with the two copepod species Acartia tonsa and Temora longicornis from the same marine environment
ERP016502NGS-based reverse genetic screen for common embryonic lethal mutations compromising fertility in livestock
ERP016503Arising selective sweeps in Andean high altitude populations
ERP016504BBSRC
ERP016505Diversity of cultural activated sludge bacteria under different oxytetracycine stresses
ERP016506Oxygen shapes trophic interactions of a chitin-degrading soil microbiome
ERP016507Temporal dynamics and diversity of Legionella community in cooling tower water
ERP016509Neisseria_meningitidis_carriage_studies
ERP01651010-year drainage effects on microbial community structure on an Arctic floodplain in Chersky, Northeastern Siberia
ERP016512Stress response, gut microbial diversity, sexual signals, and social interactions in North American barn swallows
ERP016513Analysis of post-transcriptional RNA modifications in Caenorhabditis elegans under stress
ERP016515Association of host genome with intestinal microbial composition in a large healthy cohort
ERP016517Neuronal Ceroid Lipofuscinosis (NCL) is caused by the entire deletion of CLN8 in the Alpine Dachsbracke
ERP016520Metagenomic recovery of phage assemblage from Manikaran hot springs
ERP016521Mitochondrial DNA mutations and gut microbiota in mouse aging
ERP016522Arctic petroleum exposures; total and metabolically active bacterial community dynamics
ERP016523Transcriptomic_profiling_of_trophoblast_stem_cells_mutant_for_selected_genes_of_the_DMDD_collection
ERP016524International Human Microbiome Standards
ERP016525Comparison between the metagenomes of treated wastewater and treated wastewater receiving water body
ERP016526Detection and quantification of Pseudomonas species, including P. aeruginosa, in cooling tower water using a genus-specific Illumina-based approach
ERP016527Investigating the genomic changes which occur in early the development of head and neck cancer.
ERP016528A high-coverage Yersinia pestis Genome from a 6th-century Justinianic Plague Victim
ERP016529Combined culture and metagenomic analyses reveal significant shifts in the composition of the cutaneous microbiome in psoriasis
ERP016530Investigating outbreaks of Salmonella enterica serovar Typhimurium and its monophasic variants in Denmark by whole-genome sequencing; getting ready for real-time surveillance
ERP016531Klebsiella_clinical_sample_sequencing
ERP016532Bacterial community characterisation and pathogen profiling in a cooling tower system using an Illumina-based approach
ERP016533Metagenomic analysis of microbial mat of hot springs
ERP016535Cervicovaginal bacteria impact HIV acquisition in young African women
ERP016536Gut microbiota regulate hepatic von Willebrand Factor synthesis and arterial thrombosis via Toll-like receptor-2
ERP016537Age-related differences in the luminal and mucosa-associated gut microbiome of broiler chickens and shifts associated with Campylobacter jejuni colonization
ERP016538The Cell Wall Polymer Lipoteichoic Acid Becomes Nonessential in Staphylococcus aureus Cells Lacking the ClpX Chaperone
ERP016539Myrold Oregon transect
ERP016540Understanding Cultivar-Specificity and Soil Determinants of the Cannabis Microbiome
ERP016541Defining seasonal marine microbial community dynamics
ERP016542Marine CDOM accumulation during a coastal Arctic mesocosm experiment: No response to elevated pCO2 levels
ERP016543Spatial variation in arctic soil microbial communities in fire impacted permafrost ecosystems
ERP016544plant community manipulation and spatialized analyses of AM fungi in 2 plant species
ERP016546Composition_of_the_human_micobiome_in_granulomatosis_with_polyangiitis__A_pilot_study
ERP016547Time series RNA-seq of temperature-entrained and light-entrained bloodstream and procyclic form Trypanosoma brucei cultures
ERP016548Genotypes and subgenotypes of hepatitis B virus circulating in an endemic area of Peru two decades post-vaccination hepatitis B
ERP016549Genetic diversity of Isolates of the rice pathogenic fungus Fusarium fujikuroi from different geographic origin
ERP016550Zoonotic transmission of the mcr-1 colistin resistance gene from non-intensive poultry farms in Vietnam
ERP016551Metagenomic analysis of sediment (MNS2) of Manikaran hot springs
ERP016552The effect of DNA extraction methodology on gut microbiota research applications
ERP016553human SU-DHL-5 and TMD-8 B-lymphome cell line subclones
ERP016554Validation_of_higher_mutation_rates_in_early_embryonic_mutations_in_the_paternal_germlime_in_laboratory_mice
ERP016555Recombination in cattle
ERP016556Recombination in cattle - imputed
ERP016557Polluted Polar Coastal Sediments
ERP016559Strain variation in the human periodontopathogen Porphyromonas gingivalis using Porphyromonas gulae as an outgroup
ERP016560Oil spill impacted sediments
ERP016561Paired-end sequencing of the genomic DNA of Saccharomyces bayanus CBS 380
ERP016562Bursaphelenchus mucronatus whole transcriptome
ERP016565SCD6 and Rasputin are two RNA binding proteins of the parasite Leishmania braziliensis. The main interest is to know at which RNA they bind.
ERP016566Analysis of SNP variation in candidate genes to identify genes associated with adaptation to exposure to wastewater treatment work effluents.
ERP016567argeting the trimethylamine-producing bacteria of the human gut microbiota
ERP016568RNA-Seq Arabidopsis thaliana ET factors
ERP016569Meningeal cells contribute to postnatal cortical neurogenesis.
ERP016570Artificial mix of real bacterial sequences
ERP016571Metagenomic analysis
ERP016572Metagenomic analysis of sediment (MNS3) of Manikaran hot springs
ERP016573Complete genome sequence of an Ebola virus isolate from an imported case in Germany ex Sierra Leone determined by circle sequencing (Cir-seq)
ERP016574Mus caroli genome assembly
ERP016575Mus pahari genome assembly
ERP016576Obesity_and_leukemia_onset_in_mice
ERP016577Effects of different amendments on soil microbial communities
ERP016579Oil spill dispersant strategies and bioremediation efficientcy
ERP016581Metagenomics reveals sediment microbial community response to Deepwater Horizon oil spill
ERP016582Metagenome of microbial communities involved in the nitrogen cycle in sugarcane soils in Brazil
ERP016583The effect of wetland age and restoration methodology on long term development and ecosystem functions of restored wetlands
ERP016584Identifying the microbial cohorts associated with drought-driven carbon release from peatland ecosystems.
ERP016585Whole genome sequence of the cheese isolate Streptococcus macedonicus 679
ERP016586Brazilian Antarctic cleanup 16S
ERP016587Long Term Soil Productivity project
ERP016588Microbial communities of the deep unfrozen: Do microbes in taliks increase permafrost carbon vulnerability?
ERP016589Metagenomic analysis of agricultural soil
ERP016591A decade of seasonal dynamics and co-occurrences within freshwater bacterioplankton communities from eutrophic Lake Mendota, WI, USA
ERP016592Laboratory Directed Research and Development Biological Carbon Sequestration
ERP016593homo cancer
ERP016594Suspected Outbreak of C. diphtheriae wound infections
ERP016595Genetic mutations of eEF2K in HCC
ERP016596Complete genome sequence of Streptococcus thermophilus ACA-DC 2
ERP016597Xanthomonas campestris pv. campestris (8004) far-red light irradiation and XccBphP overexpression transcriptional analysis
ERP016598Set Anode Potentials Affect the Electron Fluxes and Microbial Community Structure in Propionate-Fed Microbial Electrolysis Cells
ERP016599Identifying Hepatocyte Growth Factor dose response functions in Madin-Darby Canine Kidney Epithelial Cells
ERP016600SCDPEWES
ERP016601Abiotic stress-response reprogramming events underlie successful initiation of apomixis
ERP016602Large preferential Site for packaging of bacterial DNA by phiC725A, a new Pseudomonas aeruginosa F116-like bacteriophage
ERP016603Multiparameter functional diversity of human C2H2 zinc finger proteins
ERP016604Characterization of a novel cyclic lipopeptide antibiotic producing Pseudomonas flourescens strain, promising for combating fire blight
ERP016605Chloroplast genomes as a tool to resolve red algal phylogenies: a case study in the Nemaliales
ERP016606456
ERP016607Microbiome of honey bees from Puerto Rico
ERP016608Gut Microbiota in Parkinson Disease
ERP016610We assess the role of DNA methylation in regulating virulence in culture using whole-methylome analysis of virulent and reduced virulence-derived cultures of Botrytis cinerea
ERP016611Identifying crossover locations in an Arabidopsis thaliana HEI10 Col x Ler F2 population using genotyping by sequencing.
ERP016613An outbreak of high-level azithromycin resistant Neisseria gonorrhoeae in England
ERP016614Rapid Whole-Genome Sequencing for Detection and Characterization of Microorganisms Directly from Clinical Samples
ERP016615Term and preterm shotgun samples
ERP016616Transcriptomics in Zika virus-infected human brain organoids
ERP016617ISS Meta genomics study
ERP016618Importance of Whole Genome Sequencing for the assessment of outbreaks in Diagnostic Laboratories: analysis of multiple samples taken from patients with severe pediatric and adult Streptococcus pyogenes infections
ERP016620The effect of Arbuscular mycorrhizal fungi on soil bacterial community during litter decomposition
ERP016621The microbiota at multiple body sites during pregnancy in a rural Tanzanian population and the effects of Moringa supplemented probiotic yogurt.
ERP016622Sequencing of the MDR strains of Mycobacterium tuberculosis isolated during 2nd phase clinical trials of FS-1
ERP016623Effect of Bifidobacterium breve on the intestinal microbiota of coeliac children on a gluten free diet.
ERP016624Analysis of Anadenanthera colubrina seed endophytes by pyrosequencing of bacterial 16S RNA genes
ERP016626RNA localization is a key determinant of neurite-enriched proteome - Riboseq
ERP016627RNA localization is a key determinant of neurite-enriched proteome - RNAseq
ERP016628Cold response in lentil
ERP016629Microbiome samples derived from Buruli ulcer wounds and non-Buruli ulcer skin ulcerations
ERP016630Legionella pneumophila Macrolides resistance
ERP016631Transcriptome sequencing of Daphnia galeata and combined assembly
ERP016632Metagenomic analisys on three different spots of Lambro river focusing the attention both on microbial and viral communities
ERP016633Using genome sequencing of Pseudomonas aeruginosa from non-cystic bronchiectasis lung infections
ERP016634Chromatin conformation of the Shh locus in limbs.
ERP016635Sex-biased gene expression in two Daphnia galeata clones from different populations
ERP016636Tuning the transcriptional response to hypoxia through HIF prolyl- and asparaginyl-hydroxylase inhibition:Sequencing Data
ERP016638Plasmids of distinct IncK lineages show a compatible phenotype
ERP016640whole genome sequencing for Acinetobacter Baumannii strain ABE3_M (Morocco)
ERP0166411
ERP016642Analysis of dust samples from the Russian part of the ISS
ERP016643Genome of B. cereus group strains with particular adaptation properties
ERP016645Technical biases and variations on species abundances for a repetitively sequenced fecal sample 16S rRNA library.
ERP016646Maternal Secretor Status and Microbiota Composition
ERP016647Arboreal adaptation and venom evolution in Australian funnel-web spiders
ERP016649Effects of propidium monoazide (PMA) treatment on cystic fibrosis airway mycobiome and bacteriome analysis
ERP016651Assessment of total and active bacterial communities in groundwater of two superimposed limestone aquifer assemblages
ERP016652Dairy and plant based food intakes are associated with altered faecal microbiota in 2 to 3 year old Australian children.
ERP016653Trade-offs between microbiome diversity and productivity in a stratified microbial mat
ERP016654Analysis of somatic mutations in blood in a neurological autoimmune disease cohort
ERP016655Differential expression of mRNAs in obese germfree mice induced by Enterobacter cloacae B29 combined with the high fat diet
ERP016657Genomic Perturbations Reveal Distinct Regulatory Networks in Intrahepatic Cholangiocarcinoma
ERP016658Salmonella_Enteritidis_Invasive__NTS_
ERP016659Individualized and effects of FOS and GOS on human glucose level on OGTT and gut microbiome
ERP016662Bioelectrochemical BTEX removal at different voltages: assessment of the degradation and characterization of the microbial communities
ERP016663Differentially-expressed genes during spontaneous reactivation of Marek’s disease virus in lymphoblastoid cell lines determined by global gene expression profiling
ERP016664Complete genome sequence of Lactobacillus salivarius strain LPM01
ERP016665Extremely Drug-Resistant Salmonella enterica Serovar Senftenberg Infections in Patients in Zambia
ERP016666Bradyrhizobium sp. ERR11
ERP016667Bradyrhizobium yuanmingense CCBAU 10071
ERP016668Rhizobium hainanense CCBAU 57015
ERP016669Rhizobium lusitanum P1-7
ERP016670Rhizobium miluonense HAMBI 2971
ERP016671Rhizobium multihospitium HAMBI 2975
ERP016672Rhizobium sp. HBR26
ERP016673Cupriavidus alkaliphilus ASC-732
ERP016674Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype
ERP016675BBSRC_AEC
ERP016677A universal genome sequencing method for Rotavirus A from human stool samples which identifies segment reassortment and multi-genotype mixed infection
ERP016678Rapid resistome mapping using nanopore sequencing
ERP016679Effect of Pre-Acclimation of Granular Activated Carbon on Microbial Electrolysis Cell Startup and Performance
ERP016680Small non-coding RNAs as biomarkers of musculoskeletal ageing and osteoarthritis
ERP016681Characterisation of vancomycin-resistant Enterococcus faecalis in Copenhagen and comparison to vancomycin-susceptible isolates
ERP016683Nitrate addition has minimal short-term affects on Greenland ice sheet supraglacial prokaryotes.
ERP016684Genome sequencing of bacteriophage isolates from slurry
ERP016686Microbial community diversity in reactors digesting chicken manure
ERP016687RNA-seq analysis identifies an Lgr6 isoform and novel markers characterizing adult skin stem cells
ERP016688Extending colonic mucosal microbiome analysis - Assessment of colonic lavage as a proxy for endoscopic colonic biopsies
ERP016690Pan Genome study
ERP016691Repression of miR-31 expression by BCL6 specifies helper function of human follicular helper T cells
ERP016694Metagenomic barcode approach of the ExStream Project 2014 for eukaryotes
ERP016697Whole genome sequencing and analysis of Neisseria isolates from Iceland
ERP016698Positive selection inhibits gene mobilisation and transfer in soil bacterial communities
ERP016700Chitinophaga costaii A37T2
ERP016701Acinetobacter albensis ANC 4874
ERP016702Gordonia sp. V-85
ERP016703Arthrobacter enclensis NIO-1008
ERP016704Weissella hellenica R-53116
ERP016705Bacillus enclensis SGD-1123
ERP016706Fictibacillus enclensis NIO-1003
ERP016707Bifidobacterium bohemicum R-53250
ERP016708Rhodococcus enclensis NIO-1009
ERP016709Bifidobacterium sp. R-52791
ERP016710Arthrobacter indicum NIO-1057
ERP016711Gilliamella sp. R-53248
ERP016712Snodgrassella sp. R-53583
ERP016713Weissella sp. R-53094
ERP016714Bacillus sp. NIO-1130
ERP016715Rhizobiales sp. HL-109
ERP016716Enterobacter oryzendophyticus REICA_082
ERP016717Gilliamella sp. R-53144
ERP016718Bacillus sp. V-76
ERP016719Enterobacter oryziphilus REICA_142
ERP016720Lactobacillus apis R-53131
ERP016722Escherichia coli DBS1 strain sequencing
ERP016723Colistin resistance evolution in Pseudomonas aeruginosa
ERP016724Metagenomic analysis of soil samples from an oil contaminated military base
ERP01672516S rRNA seq data from placenta, fetal membrane, oral and vaginal samples taken as part of the iLiNS-DYAD clinical trial in Malawi.
ERP016726Whole genome sequencing (WGS) was used for the characterization of the phylogeny, the molecular epidemiology and the resistome of the multidrug resistant (MDR)/ extensively drug resistant (XDR) P. aeruginosa high-risk clone ST175.
ERP016727Zonkey: A fast, simple, accurate and sensitive pipeline to genetically identify equid F1-hybrids in archaeological assemblages
ERP016728Microbial diversity in different compartments of an aquaponics system
ERP016729Genome assembly and annotation of Brucella abortus 2308W
ERP016730PacBio genome re-sequencing and assembly to confirm the haplotype and allelic divergence of the Fragilariopsis cylindrus genome
ERP016731Altered mucosal expression of microRNAs in pediatric patients with inflammatory bowel disease
ERP016732Assessment of the community composition of attached and suspended denitrifiers in limestone aquifers targeting nirK and nirS genes
ERP016733Shotgun Metagenomic Sequencing of the Arctic Ocean during Winter-Spring Transition
ERP016734Rio de Janeiro Coastline
ERP016735Distinct microbial communities associated with buried soils in the Siberian tundra.
ERP016736A. minutum divergence
ERP016737RNA-SEQ BASED TRANSCRIPTOME ANALYSIS OF THE INTERFERON HOST RESPONSE UPON VACCINIA VIRUS INFECTION.
ERP016738Whole transcriptome sequencing of Triticum aestivum (Wheat Chinese Spring)
ERP016739Salix viminalis genomic sequencing of 4 genotypes
ERP016740Salix viminalis RNA sequencing of 6 genotypes and 2 tissues
ERP016742Yersinia pestis halotolerance illuminates plague reservoirs
ERP016743Complete genome sequence of Pomona leaf-nosed bat-associated polyomavirus 1
ERP016744Repeat size determination by two molecular rulers in the type I-E CRISPR array
ERP016746Myrold Alder Fir
ERP016747Samples from IQ Bio class
ERP016748Whole-grain wheat consumption reduces inflammation in a randomized controlled trial on overweight and obese subjects with unhealthy dietary and lifestyle behaviors: role of polyphenols bound to cereal dietary fiber
ERP016749Intergenerational Lizard Lounges do not Explain Variation in the Gut Microbiomes of Green Iguanas
ERP016750Emergence of phage-resistant Pseudomonas aeruginosa biofilm cells in response to the pressure exerted by bacteriophage treatment
ERP016751Transcriptional profiling (SMARTer-Seq) has been performed on CD48-/CD48+ LSK hematopoietic cells to determine the effect introduced by the abrogation of Sbds within mesenchymal cells.
ERP016752Spatial scale drives patterns in soil bacterial diversity.
ERP016754Single_cell_RNA_seq_and_bisulfite_seq_at_various_stares_of_HiPSCs_differentiating_toward_definitive_endoderm_derived_lineages
ERP016755Comparative_genomics_of_canine_isolated_L___Leishmania__amazonensis_from_an_endemic_focus_of_visceral_leishmaniasis_in_Governador_Valadares__southeastern_Brazil
ERP016757Whole genome sequencing for Acinetobacter Baumannii strain ABE12_M (Morocco)
ERP016758Whole genome sequencing for Acinetobacter Baumannii strain ABE21_M (Morocco)
ERP016759Whole genome sequencing for Acinetobacter Baumannii strain ABE27_M (Morocco)
ERP016760Whole genome sequencing for Acinetobacter Baumannii strain AC3_M (Morocco)
ERP016761Whole genome sequencing for Acinetobacter Baumannii strain AC26_M (Morocco)
ERP016762Whole genome sequencing for Acinetobacter Baumannii strain AC11_M (Morocco)
ERP016763Whole genome sequencing for Acinetobacter Baumannii strain AC13_M (Morocco)
ERP016764Whole genome sequencing for Acinetobacter Baumannii strain AC40_M (Morocco)
ERP016765Complete genome sequence of Proteiniphilum saccharofermentans M3/6T
ERP016766Brucella 141012304 whole genome sequencing project
ERP016768Detecting AGG interruptions in male and female FMR1 premutation carriers by single-molecule sequencing
ERP016769Molecular Epidemiology of Multi- and Extensively-Drug-Resistant Mycobacterium tuberculosis in Ireland, 2001-2014
ERP016770River Mobilome
ERP016772Bacterial communities associated with houseflies (Musca domestica L.) at danish farms
ERP01677316s Amplicon sequencing of GCB and Kadaknath breeds cecum samples
ERP016775Essential genes for in vitro growth of the endophyte Herbaspirillum seropedicae SmR1 revealed by Tn-seq
ERP016776Salmonella enterica serovar Enteritidis originating from returning travellers and locally acquired human infections in Europe.
ERP016777First report of mecC-carrying MRSA in domestic swine
ERP016779Treatment efficiencies of on-site hospital wastewater treatment plants and the quality of effluent discharged to a centralized municipal wastewater treatment plant
ERP016781Comparative genomics of the sulfur-reducing bacterial family Desulfurellaceae
ERP016782Chimpanzee genomic diversity reveals ancient admixture with bonobos
ERP016783Mouse Genomes Project, de novo assembly
ERP016784Genome sequencing of Polynucleobacter necessaries strains
ERP016786Elevated atmospheric CO2 concentration decreases prokaryotic diversity in the rhizosphere of barley (Hordeum vulgare L.)
ERP016788test2
ERP016794Biological rejuvenation of iron oxides in bioturbated marine sediments
ERP016796C. elegans mitotic zone RNA-seq
ERP016797A DSS colitis mouse model was used to assess the microbial metabolic landscape during inflammation.
ERP016798Whole transcriptome profiling of 63 breast cancer tumours
ERP016799H3K14ac is linked to methylation of H3K9 by the Tudor domains of SETDB1
ERP016800The genomic landscape of E.coli in urology wards of a German university hospital
ERP016801TSLPR expression marks a functionally discrete subset of human monocytes elicited by TLR4 activation.
ERP016802Kelp forest microbial diversity
ERP016803Differences in the skeletal muscle transcriptome profile associated with extreme values of fatty acids content
ERP016804Quantitative Seq-LGS – a Genome-wide Method for Identifying the Genetic Drivers of Multiple Phenotypes in Malaria Parasites
ERP016805Sequence of selected HMW Glu and LMW Glu alleles in several wheat cultivars
ERP016806Effects of in-feed antibiotics on the microbiome of fecaes, ileum and ileocaecal lymph nodes samples of pigs
ERP016807First report of mecC-carrying MRSA in domestic swine
ERP016808Draft genome sequence of Bacillus subtilis Ia1a, a new strain for poly-gamma-glutamic acid and exopolysaccharides production
ERP016809RNA-seq analysis of grxs17 seedlings
ERP016810Genome sequences of four Pseudomonads from Oak Ridge Field Research Center
ERP016811Oryza sativa ssp. indica Illumina lwhole-genome bisulfite sequencing used for coverage comparison next to the method plant-RRBS
ERP016812Metagenomic samples from soil
ERP016813Integrated metabolomics and metagenomics analysis of plasma and urine identified microbial metabolites associated with coronary heart disease
ERP016814Comparative Genomics of Intestinal Protozoa
ERP016815DDx degradation by addition of toluene and glycerol
ERP016816Transcriptomic profiling of human purified intestinal epithelial samples and organoids from paediatric and foetal small and large intestine
ERP016817Application of whole-genome sequencing for surveillance of food-borne pathogen Campylobacter jejuni
ERP016818The objective of this study was to evaluate the removal of linear alkylbenzene sulfonate (LAS) associated with Fe(III) supplementation using an expanded granular sludge bed (EGSB) reactor. The reactor was inoculated with a granular sludge obtained from a full scale UASB plant that treated effluent from a poultry slaughterhouse and fed with synthetic wastewater containing a specific LAS loading rate (SLLR) of 1.5 mg.gVS-1.d-1 (~ 16.4 mgLAS L-1 influent) and supplied with 7.276 µMol L-1 (~ 410 mgFe L-1) of Fe(III). The biomasses from the inoculum and at the end of the EGSB-Fe operation (127 days) were characterized using 16S rRNA Ion Tag sequencing. An increase of 20 % in the removal efficiency was observed compared to reactors without Fe(III) supplementation that was reported in the literature, and the LAS removal was approximately 84 %. The Fe(III) reduction was dissimilatory (the total iron concentration in the influent and effluent were similar) and reached approximately 64 %. The higher Fe(III) reduction and LAS removal were corroborated by the enrichment of genera, such as Shewanella (only EGSB-Fe - 0.5 %) and Geobacter (1 % - inoculum; 18 % - EGSB-Fe). Furthermore, the enrichment of genera that degrade LAS and/or aromatic compounds (3.8 % - inoculum; 29.6 % – EGSB-Fe of relative abundance) was observed for a total of 20 different genera.
ERP016820Lake_Malawi_cichlid_RNA_sequencing
ERP016821Chip-Seq analysis of human chromosome 21 after its passage through either the female or male mouse germline
ERP016822Comparative genomics including the basal pathogen Peronospora belbahrii reveal common evolutionary patterns and the monophyly of downy mildews in a paraphyletic Phytophthora
ERP016823Host genotype and gut microbiome modulate insulin secretion and diet-induced metabolic phenotypes
ERP016824Complete genome sequence of the Akkermansia glycaniphila strain PytT a mucin-degrading specialist of the reticulated python gut
ERP016825Draft genome sequence of Proteiniborus sp. DW1
ERP016826Listeria monocytogenes in rhombencephalitis - lineage I
ERP016827Thymic epithelial cells require p53 to support their role in T-cell development and tolerance induction.
ERP016828Clinical study indicated that Coreopsis tinctoria decrease TG and LDL without injury of liver function in the patients with hyperlipidaemia. Expreimental hyperlipidaemia mouse model also verified that Coreopsis tinctoria amend lipid metabolism without liver injury. Gut microbial richness and diversity significantly decreased in mice with hyperlipidaemia. After treatment with the orally feeding of CT gut microbial richness and diversity increased. Importantly, bacterial communities were significantly separated between normal controls and hyperlipidaemia mice. Oral feeding of CT can improve gut microbial structure and recover it back to normal status. Taxonomy profiles of gut microbial communities was also described. The oral administration of CT attenuated bacterial alterations at the class, order, family and genus level in mice with hyperlipidaemia. gut microbial biomarkers showed high discrimination power for hyperlipidaemia mice from normal controls
ERP016830Community barcoding reveals little effect of ocean acidification on the composition of coastal plankton communities: evidence from a long-term mesocosm study in the Gullmar Fjord, Skagerrak
ERP016833Postmortem Microbiome Changes During Thaw for Autopsy: Two Pediatric Case Studies
ERP016834RNA-seq analysis of normoxic and hypoxic tumor-associated macrophages
ERP016835Genome-wide confirmation of isogenicity of clone founders (G1) in European seabass (Dicentrarchus labrax)
ERP016836Human Postmortem Microbiome: A 19 d decomposition case study
ERP016837Amplicon sequencing of soil samples from sorghum field
ERP016840Colistin Resistant Acinetobacter baumannii
ERP016841The impact of long-term N addition on temperature sensitivity to decomposition in a spruce forest
ERP016842How to increase N fixation in paddy soil?
ERP016846RNA-seq transcriptome profiling of the psychrophilic phytoplankton Fragilariopsis cylindrus under environmentally relevant growth limitations
ERP016847Identification of the anti-mycobacterial functional properties of piperidinol derivatives
ERP016848Marine diatoms sense and respond to microscale turbulence in non-limiting nutrient conditions
ERP016849Whole genome sequencing for Acinetobacter Baumannii strain AB32_M (Morocco)
ERP016851Spatial and Temporal Variation in Nest and Egg Bacteria of tree swallows in North America
ERP016852Temple TX native exotic precip study
ERP016853Community of haloarchaea, enriched at low temperature
ERP016854Bacterial Community Spatial and Temporal Variation in a North Temperate Bog Lake
ERP016855Individualized glycemic responses and gut microbiome changes to dietary intervention with fructooligosaccharides and galactooligosaccharides
ERP016856Transcriptomic profile of surgically induced mouse tail lymphedema at 2 and 6 weeks post-operatively versus control un-operated mice.
ERP016857Full genome characterization of a novel alphaherpesvirus associated with fatal diseases in banded penguin chicks (Spheniscus humboldti and Spheniscus demersus)
ERP016858Deciphering composition and function of the root microbiome of a legume plant
ERP016859ChIP-seq analysis of the Arabidopsis zinc-finger protein SERRATE (SE)
ERP016860Draft genome sequence of Donghicola sp. KarMa
ERP016861Development of genetic markers from whole-genome shotgun sequences of Balsamocarpon brevifolium
ERP016862Feasibility of anionic surfactant removal by anaerobic co-digestion of commercial laundry wastewater and domestic sewage
ERP016863Rhizosphere Microbiome of Cork oak
ERP016864Glucocorticosteroids and ciclosporin do not significantly impact canine cutaneous microbial and parasitic populations.
ERP016865Modified iCLIP sequencing of HEK293 cells with antibody PTBP1
ERP016867Natural variation of transcriptional response to mild drought in growing Arabidopsis leaves
ERP016868Fruit pulp (mango) and soluble fibre (pectin) impact bacterial diversity and abundance differently within the porcine large intestine
ERP016869Recovery of biological soil crust-like microbial communities in previously submerged soils of Glen canyon
ERP016870Gene expression profiling of tumor-initiating stem cells from mouse Krebs-2 carcinoma using a novel marker of poorly differentiated cells
ERP016871Interaction between the bacterial microbiome diversity and disease susceptibility of hares
ERP016872High-throughput sequencing reveals a highly divers and dynamic bacterial diversity during a rumen simulation technique (RUSITEC) experiment.
ERP016873Draft genome sequence of Clostridium sp. N3C
ERP016874Draft genome sequence of Methanoculleus chikugoensis L21-II-0
ERP016875Shallow whole genome sequencing of biopsies from retinoblastoma tumors in chimeric murine knockout double mice (pRb-p130 and pRb-p107 knockouts) to identify secondary alterations that drive oncogenesis.
ERP016876Draft genome sequence of Sporanaerobacter sp. PP17-6a
ERP016877Phylogenomics in Cynipid Gallwasps, Agaonid Figwasps, and chalcid parasitoids using Illumina sequencing technology
ERP016878Centrosome amplification is sufficient to promote spontaneous tumorigenesis in mammals
ERP016879Hawaii Kohala Volcanic Soils
ERP016880Geographic distance and pH drive bacterial distribution in alkaline lake sediments across Tibetan Plateau
ERP016881Whole genome sequencing of S. cerevisiae strain F45, progeny of a cross between YO502, a modified haploid progeny of diploid strain DBVPG1853 (white-tecc strain), and YO486, a modified version of strain UC5 (sake strain).
ERP016882Pitcher plant Darlingtonia california microbe intervention and analysis
ERP016883Halophilic Communities as a Source for Novel Lignocellulolytic Enzymes
ERP016884Using WTP diet to modulate gut microbiota to alleviate human type 2 diabetes
ERP016885The efficacy of high-throughput sequencing and target enrichment on charred archaeobotanical remains
ERP016886Region-wide and ecotype-specific differences in demographic histories of threespine stickleback populations, estimated from whole genome sequences
ERP016887Delete
ERP016888Meiotic recombination initiation hotspots in Arabidopsis genes and transposons (H3K4m3 ChIP-seq)
ERP016890Meiotic recombination initiation hotspots in Arabidopsis genes and transposons (MNase-seq)
ERP016891Meiotic recombination initiation hotspots in Arabidopsis genes and transposons (SPO11-1-oligonucleotides-seq)
ERP016892Fast, accurate and automatic ancient nucleosome and methylation maps with epiPALEOMIX
ERP016893Updating the Mycobacterium bovis AF2122/97 reference genome
ERP016894Niche filtering of bacteria in soil and rock habitats of the Colorado Plateau Desert, Utah, USA
ERP016896Whole-genome sequencing of two wild-derived strains of Mus musculus domesticus, LEWES/EiJ and ZALENDE/EiJ
ERP016897Characterizing the gut microbiome of the last population of undomesticated horses living in the wild, the Przewalski horse
ERP016898Whole genome sequencing of S. aureus from the Democratic Republic of Congo
ERP016899Soil metagenomics
ERP016900Microbial community of the bulk soil and rhizosphere of rice plants over its lifecycle
ERP016901Listeria monocytogenes in rhombencephalitis - lineages II and III
ERP016903Microbial profiling is feasible using both long-term frozen and buffered fecal samples
ERP016904deCODE Genetics whole-genome sequencing variants 2
ERP016905deCODE Genetics whole-genome de novo variants
ERP016906HCMV transcriptome in primary monocyte-derived cell types
ERP016907Bacterial viruses enable their host to recruit antibiotic resistance genes from competitors
ERP016908Salmonella for source attribution study
ERP016909Plants coopt a transposon-derived protein domain for gene silencing
ERP016910The antiviral RNAi response in vector and non-vector cells against orthobunyaviruses
ERP016911AtPRMT5 regulates shoot regeneration through modulating multiple genes expression analyzed by RNA-seq
ERP016915RNA-seq system comparison of Streptomyces lividans TK24 cultivated under micro-scale biolector and reference bioreactor conditions
ERP016921Streptomyces sp. DpondAA-F4 Genome sequencing and assembly
ERP016922Overexpression of PGC-1a in aging muscle enhances a large sub-set of young-like gene expression patterns
ERP016923Mission Bay Sediment Viromes
ERP016924Marine mammal skin microbiomes
ERP016925Urban stress is associated with variation in microbial species composition, but not richness, in Manhattan
ERP016926Chu Changbai mountain soil
ERP016927Friedman Alaska peat soils
ERP016928To study soil metagenomics.
ERP016929CoMiniGut– a small volume in vitro colon model with increased throughput
ERP016930fgnfgnngf
ERP016931Epidemiology and genetics of Aeromonas salmonicida using whole genome sequencing
ERP016932Chironomus riparius (Laufer) draft genome
ERP016934Ancestral population reconstitution from isofemale lines as a tool for experimental evolution
ERP016935Whole genome multilocus sequence typing of extended-spectrum beta-lactamase-producing Enterobacteriaceae
ERP016936MAGE-seq E.coli infA amplicon high-throughput genotyping data, mutants from Kelsic et al. Cell Systems, 2016
ERP016937A combination of biochar-mineral complexes and compost improves soil bacterial processes, soil quality, and plant properties
ERP016938Amplicon-based metagenomics analysis of Vitis vinifera L. cv. Corvina grapes and fresh musts
ERP016939From asbestos exposure to cancer: a systemic approach to detect loss of homeostatic control in the mesothelial environment
ERP016940Multicenter study to assess the reproducibility of NGS-based bacterial typing
ERP016941Complete genome sequence of Petrimonas mucosa ING2-E5AT
ERP016943A viral metagenomics strategy on a non-metagenomics experiment: mining next generation sequencing datasets from pig DNA pools.
ERP016944Fitness Consequences of Polymorphic Inversions in the Zebra Finch Genome
ERP016945PTBP1 - Modified iCLIP
ERP016946Robinsoniella peoriensis isolated from a Clostridium difficile study
ERP016947Spatial heterogeneity of gut microbial composition along the gastrointestinal tract in natural populations of house mice
ERP016948Metagenomic study of the eukaryotic microorganisms diversity of a pond based on an environmental DNA (eDNA) sample.
ERP016950Chlorination or chloramination: Balancing the regulated THM formation and microbial inactivation in marine aquaculture waters
ERP016951MIC distribution among wild-type strains of Legionella pneumophila identify a subpopulation with reduced susceptibility to macrolides owing to genes coding for an efflux pump
ERP016952Evaluation of Methods for the Concentration and Extraction of Viruses from Sewage Water in the Context of Metagenomic Sequencing
ERP016954RNA-seq analysis of Helicobacter cinaedi ATCC BAA-847 under microaerobic and aerobic culture conditions
ERP016956Metagenomic analysis of Keri Lake sediment: an ecosystem with a long history of oil exposure.
ERP016957Comparison of root transcriptomes in four soybean cultivars with high and low isoflavonoid content
ERP016959Genotyping by sequecing using RADseq for high resolutive linkage map construction in Fusarium graminearum
ERP016960Bacterial diversity and evolution during two-phase olive mill waste (“alperujo”) composting
ERP016961Shifts in functional groups of fungi during secondary succession
ERP016962Genome diversity of Trypanosoma congolense field isolates across 10 African countries
ERP016963dede
ERP016964genomic and transcriptional variations in rapeseed genotypes with contrasting boron efficiencies
ERP016965Identifying lymphoma risk genes in a Swiss/Japanese family by WES Characterization of mediastinal B-cell lymphomas arising in two female siblings and identification lymphoma risk genes in a Swiss/Japanese family by WES.
ERP016966Complete genome sequence of Methanothermobacter wolfeii SIV6
ERP016967Sequencing of Ammonia oxidising bacteria from FISH enriched samples
ERP016968The antibiotic resistance potential of the preterm infant gut microbiome measured using shotgun metagenomics.
ERP016969TCR repertoire sequencing of mucosal Foxp3+RORgt+ regulatory T cells
ERP016970Plantinga, et al, MiRKAT-S
ERP016971Investigating microbial communities in a pilot-scale Fe and Mn removal biofiltration unit using high-throughput Illumina MiSeq data.
ERP016972Distinct JC polyomavirus strains in patients with progressive multifocal leukoencephalopathy
ERP016973Draft genome of Paenibacillus amylolyticus strain Sp949
ERP016974Draft Genome of Stenotrophomonas rhizophila strain Sp952
ERP016975Microbial diversity based on a multilocus and long amplicon sequencing approach using MinION(TM) sequencer.
ERP016976Draft Genome of Microbacterium oxydans strain Sp951
ERP016977The skin microbiome in Hidradenitis Suppurativa
ERP016978A linkage map and QTL analysis for pyrethroid resistance in the bed bug Cimex lectularius
ERP016979Zebrafish_strain_genome_assemblies
ERP016980Transcriptome sequencing of a rice lesion-mimic mutant, spotted leaf 33 (spl33)
ERP016985Evolution_of_pathogenesis_in_Streptococcus_suis
ERP016987Three multiplexed nanopore runs from PoreCamp 1
ERP016988Paternal cold exposure programs offspring brown adipose tissue function
ERP016989Deep sequencing analysis reveals the mycoviral diversity of the virome of an avirulent isolate of Rhizoctonia solani AG-2-2 IV
ERP016991Multiple evolutionary strata on young fungal mating-type chromosomes despite lack of sexual antagonism
ERP016992First description of linezolid resistance due to optrA gene in E. faecalis from poultry meat from the American continent (Colombia)
ERP016995Field pathogenomics detects rapid global spread of recent emergent European lineages of wheat yellow rust
ERP016997Burkholderia palmae JS23
ERP016998Asexual maintenance of genetic diversity in the protozoan pathogen Leishmania donovani
ERP016999Gene expression in EndoC-bH1 human beta-cell line
ERP017000The_origin_of_H58_Salmonella_Typhi_
ERP017002Fusobacterium massiliense genome
ERP017003Skin microbiome in small and large plaque parapsoriasis
ERP017005Cichlid_diversity_sequencing___Malawi_2016
ERP017008Isolation_of_a_new_phage_family_that_targets_Photorhabdus_luminescens
ERP017009We profiled the transcriptome of mouse and hamster oocytes
ERP017010Soil samples collected for whole-genome shotgun sequencing.
ERP017011Production of individualized V-gene databases
ERP017012Structure and function of the fecal microbiota in diarrhoeic neonatal piglets
ERP017015HipSci___Whole_genome_sequencing___healthy_volunteers
ERP017016Complete and expertly annotated genome of the type strain of Dickeya (aquatica 174/2)
ERP017017This study provides detailed structure-function information of single-domain antibodies binding influenza hemagglutinin, information which further supports the suitability of nanobodies as universal binding reagents for vaccine potency assays.
ERP017018Ihuprevotella massiliensis genome
ERP017019A_human_infection_model_investigating_the_clinical_and_immunological_effects_of_repeated_exposure_to_enteric_fever_using_Salmonella_Typhi_or_Salmonella_Paratyphi_A_as_the_infectious_agent
ERP017020Acidaminococcus massiliensis genome
ERP017021Sequencing and comparative genomics of Candida glabrata isolate FFUL887
ERP017022Caecumella massiliensis genome
ERP017023Bacterial Communities in Sheep Rumen, Enrichment Culture and Anaerobic Digestion Sludge
ERP017025Colonella massiliensis genome
ERP017026Streptococcus timonensis genome
ERP017027Ruminiclostridium massiliense
ERP017029Plasmids of distinct IncK lineages show a compatible phenotype
ERP017030Microbial-Induced Corrosion
ERP017031Gene expression differences in Longissimus muscle of Nelore steers genetically divergent for residual feed intake
ERP017032Whole genome Sequencing of Spar KO mice
ERP017035Largest STEC Outbreak reported to date in Australia
ERP017036Transcriptome analysis of Hwaseonchal-byeo, stage of seed development and heading date + 14days using Illumina HiSeq 2000
ERP017037Transcriptome analysis of Baegjinju-byeo, stage of seed development and heading date + 14days using Illumina HiSeq 2000
ERP017038Transcriptome analysis of Ilpum-byeo, stage of seed development and heading date + 14days using Illumina HiSeq 2000
ERP017039Transcriptome analysis of Goamy-byeo, stage of seed development and heading date + 14days using Illumina HiSeq 2000
ERP017040Deciphering the microbiome shift during fermentation of medicinal plants
ERP017041The small intestine drives diet induced alterations of the human gut microbiome
ERP017044Genomes of Klebsiella isolates belonging to different species and isolated in various environments
ERP017045Urgent implementation in a hospital setting of a strategy to rule out secondary cases caused by imported XDR tuberculosis at diagnosis
ERP017046SEC16 overexpression in Saccharomyces cerevisiae
ERP017048Microbiomes from different citrus rootstock genotypes
ERP017050we addressed whether the established dialogue between IFNg and glucose metabolism involves a third player – the gut microbiota. By using systems biology approaches and analyzing trans-kingdom interactions we found that, indeed, the effect of IFNg on glucose tolerance is mediated by one of the members of mouse gut microbiota, Akkermansia muciniphila. Further, we have identified Irgm1 as a IFNg-regulated host gene responsible for control of A. muciniphila levels in the gut. In addition, the investigation of human subjects revealed that A. muciniphila may play similar roles in mouse and human physiology.
ERP017052Draft genome sequence of Escherichia coli K802
ERP017053Transposon-driven transcription is a conserved feature of vertebrate spermatogenesis and transcript evolution
ERP017054Radcliffe dental calculus
ERP017055BRIC-seq RNAi in Drosophila
ERP017056Divergence of alternative polyadenylation in mouse
ERP017057Comparison between mouse caecal contents and faeces
ERP017058MiR319, miR390, and miR393 are involved in aluminum response of flax (Linum usitatissimum L.)
ERP017060Amplicon study from BBSRC-DBT project
ERP017061Aboriginal mitogenomes reveal 50,000 years of regionalism in Australia
ERP017064mcr-1 and mcr-2 variant genes identified in Moraxella species isolated from pigs.
ERP017065Analysis of the naive and antigen experienced B-cell receptor repertoire in healthy donors of different ages
ERP017066Long-term effect of the administration of two doses of formic acid on the intestinal microbiota profile of growing pigs
ERP017067Whole Genome Sequencing of Salinicoccus sp. BAB 3246 strain isolated from Saline Desert of Gujarat, India
ERP017069Dissemination of GIM-1
ERP017070We developed a theoretical framework which explains why the relationship between growth rate (r) and carrying capacity (K) describes a skew parabola, and applied this parabola to the study of of antibiotic resistance. We demonstrate that, to become resistant, microbes need not to increase r at the cost of K (costs of resistance) but, upon abundance of nutrients, the presence of an antibiotic can lead to an increase in r and K creating a `uberbug'.
ERP017078Genomic features of a? multicellular filamentous macrobacterium from the “Humboldt Sulfuretum”
ERP017079Whole-exome sequencing in primary mediastinal B-cell lymphoma
ERP017080Effect of gut microbiota composition on precancerous anal lesions
ERP017083A frameshift mutation in KIT is associated with white spotting in the Arabian camel.
ERP017084Benchmarking extraction of ultrashort DNA molecules from herbarium specimens
ERP017086Anaerobic digestion laboratory scale reactors
ERP017087Cyanobacterial community composition in eutrophic lakes by 454 pyrosequencing
ERP017088Chloroplast genome of Adiantum hispidulum
ERP017090Sequencing and comparative genomics of Hanseniaspora guilliermondii UTAD222
ERP017091The gut microbiome in Crohn's disease and modulation by exclusive enteral nutrition
ERP017092A Fusarium oxysporum ferulic acid esterase that belongs to the fungal tannase family.
ERP017094The male determining M-factor of the global disease vector Musca domestica is a paralog of the generic splice factor CWC22
ERP017097Genomic analysis of Mycobacterium chimaera
ERP017098Metagenome, metatranscriptome and exo-proteome analyses identify molecular keys and main bacterial players involved in Chlorophyta and Charophyta microalgae-bacteria interactions
ERP017099Protein- and RNA-Enhanced Fermentation by Gut Microbiota of the Earthworm Lumbricus terrestris
ERP017102reads used for PRJEB11773
ERP017103Screening of a landlocked Atlantic salmon genome for large scale genomic changes.
ERP017104Ni Contaminated soil antibiotic resistance genes study
ERP017105Characterization and transcriptomic analysis of the porcine blood conventional and plasmacytoid dendritic cells reveals striking species-specific differences
ERP017107The Evolution of Mycobacterium tuberculosis in HIV co-infected individuals in an HIV/TB Endemic Setting
ERP017108Draft genome sequences of three clinical isolates of Tannerella forsythia isolated from sub-gingival plaque from periodontitis patients
ERP017109Illumina Platinum Genomes calls for NA12877 and NA12878 against GRCh38
ERP017110Illumina Platinum Genomes calls for NA12877 and NA12878 against GRCh37
ERP017112Integration of Genomic and Other Epidemiologic Data to Investigate and Control a Cross-Institutional Outbreak of Streptococcus pyogenes
ERP017113The Diet and Exercise-Microbiome Paradigm: Distinct Functional Profiles of the Athlete Microbiome Revealed by Metagenomic and Metabolomic Analysis
ERP017115The fecal microbiota of HIV infected on Antiretroviral Therapy and HIV uninfected individuals
ERP017116fish gut
ERP017117Dynamic shifts in oral microbiota in patients with mucositis during radiotherapy.
ERP017118Priming effects in a natural grassland soil: substrate complexity is more important than the energy level of added compounds
ERP017119genomic sequencing of modified Pseudomonas aerug­i­nosa strains
ERP0171204C-seq data from the plant Arabidopsis thaliana
ERP017121Genome sequencing of Heligmosomoides polygyrus bakeri
ERP017122Mouse_cell_line_authentication_WES
ERP017123Whole-islet RNA-sequencing analysis of human pancreas and type 2 diabetes.
ERP017124Circulating Tumor Cell(CTC) Isolation and Genonic varation Detection from Liquid Samples of Lung Cancer
ERP017125Genome sequencing of the endosymbiotic consortium and mitochondria of Cinara fornacula species voucher 2912
ERP017126Single-cell RNA-seq analysis of human pancreas from healthy individuals and type 2 diabetes patients
ERP017127Microbial succession and flavour production in the fermented dairy beverage kefir
ERP017129Our hypothesis is that the host genetics controls to some extent the composition of the skin microbiota. To test this hypothesis, we first generated a fifteen generation from an advanced mouse intercross line, defined the relative abundances of skin resident bacterial taxa, both using the 16S rRNA gene copy (DNA)- and transcript (RNA) level, and performed QTL mapping on the active (RNA)- and standing (DNA) communities.
ERP017130Plastic Metagenome Study
ERP017131Tenerivirgula tenue A7P-90m
ERP017132Sanguibacter gelidastatuaria ISLP-3
ERP017133The diversity of endophytic bacteria was revealed in tree peony by using 16S-ribosomal RNA gene Illumina amplicon sequencing?
ERP017134Vertical distribution of fungi in hollows and hummocks of boreal peatlands
ERP017135Small colony variants (SCVs) of the human pathogen Staphylococcus aureus are associated with persistent and recurrent infections. They are characterized by slow growth and can arise due to interrupted electron transport that consequently reduce membrane potential and thereby limit uptake of aminoglycosides (e.g. gentamicin). Here we have examined by which pathways the fitness cost of SCVs can be ameliorated.
ERP017136Protein- and RNA-Enhanced Fermentation by Gut Microbiota of the Earthworm Lumbricus terrestris
ERP017139RNA sequencing of microglia sorted form tamoxifen treated Sall1CreER/fl and control Sall1fl/fl mice
ERP017140A cryptic species produced by autopolyploidy and subsequent introgression involving Medicago prostrata (Fabaceae)
ERP017141Kenyan_MRSA_seq
ERP017146TH17-cell migration from the intestine to the kidney is S1P receptor 1-dependent and drives immune-mediated renal disease
ERP017147global study of RNA degradation using F1 hybrid mice
ERP017148Characterization of the gut microbiota associated with ASDs through high-throughput sequencing of the V3V5 region of 16S bacterial rRNA and of the ITS1 region of the fungal rRNA
ERP017149Corrosion of copper in oxygen-deficient groundwater with and without deep bedrock micro-organisms: characterisation of microbial communities and surface processes
ERP017150ASD gut mycobiota
ERP017152The Effect of High Oxalate Exposure on the Gut Microbiota of Neotoma albigula
ERP017153IL-12 protects from psoriasiform skin inflammation
ERP017154Omics-based insights into flavor development and microbial succession within surface-ripened cheese
ERP017155Oral antibiotic treatment exacerbates the disease severity of multiple flaviviruses
ERP017156Diversity of methanotrophs in Chinese grassland soils
ERP017157BGISEQ-500 RNA-seq demo FASTQ data
ERP017158BGISEQ-500 WGS demo FASTQ data
ERP017159The emergence and spread of ST88-MRSA in Ghana
ERP017160Different types of diatom-derived extracellular polymeric substances (EPS) drive changes in heterotrophic bacterial communities from intertidal sediments
ERP017161The_phylogeography_of_Klebsiella_pneumoniae_and_Escherichia_coli_causing_bloodstream_infections_in_Asia_and_the_role_of_siderophores_and_antimicrobial_resistance_genes_in_virulence_
ERP017162Control Sequencing with E Coli for MinION Marc Consortium
ERP017163Microbial succession and flavour production in the fermented dairy beverage kefir
ERP017164A single therapeutic early-in-life antibiotic course alters host immunologic development
ERP017166New Zealand Free Air Carbon dioxide Enrichment soil samples
ERP017167Bulk segregant analysis of 3D growth defective mutant in Physcomitrella patens (Vx501).
ERP017169Pneumococcal meningitis outbreak in BAR Ghana 2016
ERP01717016S rRNA amplicon sequences for dugout DNA samples
ERP01717116S rRNA amplicon sequences for dugout DNA sample
ERP017172All 16S rRNA amplicon sequences for dugout DNA samples
ERP017173Microbial communities in potash mine waste material – Illumina MiSeq Data
ERP017174Rees Vulcano island MedSea
ERP017175human2
ERP017176Examination of Microbial Communities through a Freshwater/saltwater Transition Zone in Cenotes, Yucatan, Mexico
ERP017177pot disturbance
ERP017179Fecal microbial characterization of Israeli hospitalized patients with suspected infectious diarrhea shows significant dysbiosis
ERP017180The influence of chitin addition on the lettuce rhizosphere microbiome
ERP017181Comparative genomics of Nitrosotalea
ERP017183Cedratvirus genome
ERP017184QuantSeq and RNAseq libraries to study developmental alternative polyadenylation
ERP017210QuantSeq libraries to study TDP-43 dependent alternative polyadenylation
ERP017211RNAseq libraries to study TDP-43 dependent alternative polyadenylation
ERP017213RNAseq libraries to study developmental alternative polyadenylation in human primitive streak progenitors derived from hESCs.
ERP017215Draft genome sequence of Streptococcus anginosus BVI, a new vaginal pathogen candidate
ERP017216Gene expression between dry and imbibed seeds in vitamin C defective (vtc) mutants and wild-type Arabidopsis thaliana
ERP017218Biofilm sloughing in integrated fixed-film activated sludge (IFAS) systems
ERP017219Barn Swallow microbiome 2011
ERP017220magnificent mongolian microbes
ERP017221Bioturbating shrimp alter the structure and diversity of bacterial communities in coastal marine sediments
ERP017222Long-term genetic vulnerability and recent erosion in the highly endangered Iberian lynx
ERP017223Whole Genome Sequencing of M. tuberculosis isolates from Kinshasa
ERP017224Egyptian mummy DNA reveals close relationship of ancient Egyptians and Near Easterners and an influx of Sub-Saharan African admixture into Egypt after the Roman era.
ERP017225Post epizootic persistence of asymptomatic Mycoplasma conjunctivae infection in a wild mountain ungulate
ERP017226Gene expression and alternative splicing analysis of breast carcinoma cells
ERP017228Intratumour heterogeneity in a BRAV600E-mutated papillary thyroid carcinoma
ERP017229Acinetobacter puyangensis ANC 4466
ERP017230Microbacterium enclensis NIO-1002
ERP017231Bacillus lonarensis 25nlg
ERP017232Burkholderia lycopersici TNe-862
ERP017233Leuconostocaceae sp. R-53105
ERP017234Pelagirhabdus alkalitolerans S5
ERP017235Exiguobacterium enclensis NIO-1109
ERP017236Anaerobium acetethylicum GluBS11
ERP017237Acinetobacter kookii ANC 4667
ERP017238Acinetobacter boissieri ANC 4422
ERP017239Acinetobacter seohaensis ANC 3699
ERP017240Investigating microbial community composition in a cold-adapted Mn(II)-amended bacterial consortium and identifying relatives of known MnOB using high-throughput Illumina MiSeq data
ERP017241Translational and transcriptional RNA-seq of SBDS cell lines.
ERP017242Prior dietary practices and connections to a human gut microbial metacommunity alter responses to diet interventions
ERP017243bacteriophages from environmental sources
ERP017244Nanoenhanced materials for the remediation of mine spoils
ERP017245Unravelling the molecular evolution of spider venoms
ERP017246Metagenomics of laying hens