AccessionTitle or Alias
SRP058234Ovine rumen papillae biopsy via oral endoscopy; a rapid and repeatable method for serial sampling
SRP058237Reprogrammed myeloid cell transcriptomes in NSCLC
SRP058239Integrated metabolic modelling reveals cell-type specific epigenetic control points of the macrophage metabolic network
SRP058240Comparative haploid genetic screens reveal divergent pathways in the biogenesis and trafficking of glycophosphatidylinositol (GPI)-anchored proteins
SRP058243RNASeq identified human transcriptome alterations in Chinese Nasopharyngeal Carcinoma
SRP058244The RNA-binding protein Musashi1 is a central regulator of adhesion pathways in glioblastoma
SRP058249The C-terminal region of the RNA helicase CshA is required for the interaction with the degradosome and turnover of bulk RNA in the opportunistic pathogen Staphylococcus aureus.
SRP058250Identification of a hepatocyte stem cell and its niche in liver homeostasis
SRP058258Bile diversion to the distal small intestine has comparable metabolic benefits to bariatric surgery
SRP058259Survey of methylomes of two beetles, Nicrophorus vespilloides and Tribolium castaneum
SRP058260Chemoresistance signature generated by genome-wide analysis of methylation, microRNAs, and gene expression in chemoresistant breast cancer cells
SRP058261Decay-initiating endoribonucleolytic cleavage by RNase Y is kept under tight control via sequence preference and sub-cellular localisation
SRP058264RNA-seq gene expression profiling in resting murine B cells from WT or KMT2D knockout mice, before and after stimulation with LPS, IL4, and anti-CD180
SRP058279MLL1 and MLL fusion proteins play distinct roles in regulating MLLleukemic transcription program [RNA-Seq]
SRP058280MLL1 and MLL fusion proteins play distinct roles in regulating MLLleukemic transcription program [ChIP-Seq]
SRP058284Global transcriptional analysis of mouse fibroblasts, chemically-induced neurons (neuron-like cells) from mouse fibroblasts and mouse primary cortical neurons by RNA-seq
SRP058292Long-range chromosome interactions mediated by cohesin shape circadian gene expression [RNA-Seq]
SRP058293Long-range chromosome interactions mediated by cohesin shape circadian gene expression [4C]
SRP058300Argonaute 2 binds directly to tRNA genes and promotes gene repression in cis
SRP058306Sevilleta Aridland Grass Rhizosphere in the Sevilleta Long Term Ecological Research site, New Mexico, US Metagenomic assembly
SRP058310BRCA1, R-loops and Recombination defects in Ewing''s sarcoma (RNA-seq)
SRP058311BRCA1, R-loops and Recombination defects in Ewing''s sarcoma (DRIP-seq)
SRP058313RNA sequencing of ILK-deficient hair follicle bulge stem cells
SRP058323Three-dimensional analysis of regulatory features reveals functional enhancer-associated loops
SRP058325Genome-wide single-molecule sequencing of 6-methyladenine in eukaryotes
SRP058329MRSA in New York Community Health Centers
SRP058336ATF4 Licenses C/EBPb Activity in Human Mesenchymal Stem Cells Primed for Adipogenesis
SRP058337Regulation of cuticle formation during fruit development and ripening in ''Newhall'' navel orange (Citrus sinensis Osbeck) revealed by transcriptomic and metabolomic profiling
SRP058341RNA-Seq analysis of Head and Neck Squamous cell carcinoma cell-lines
SRP058342NUPR1 maintains autolysosomal efflux by activating SNAP25 transcription in cancer cells
SRP058346Integrated metabolomics, transcriptomics and proteomics identifies metabolic pathways affected by Anaplasma phagocytophilum infection in tick cells
SRP058347Distinct cognitive effects and underlying transcriptome changes upon inhibition of individual miRNAs in hippocampal neurons
SRP058351MBNL Sequestration by Toxic RNAs and RNA Mis-Processing in the Myotonic Dystrophy Brain
SRP058354Loss of HP1 causes depletion of H3K27me3 from facultative heterochromatin and gain of H3K27me2 at constitutive heterochromatin
SRP058358RNA-seq profile of two daf-2 (e1370);daf-12(m20) samples
SRP058360Determining the fitness of hemizygous hybrid yeast
SRP058361ChIP-seq for Satb2 in E15 cortex
SRP058362RNA-seq of postnatal day 0 (P0) wild-type and Satb2-/- cortices
SRP058363mRNA Sequencing of skeletal muscle genes in wildtype and BCATm (BCAT2) KO mice
SRP058373Spodoptera litura Transcriptome or Gene expression
SRP058374The Roles of Arabidopsis CDF2 in Transcriptional and Posttranscriptional Regulation of Primary MicroRNAs
SRP058375Tumor exosome integrins determine organotropic metastasis
SRP058376RNAseq profiling of zebrafish larval macrophages reveals similarities with human M1 and M2 transcriptome signatures
SRP058378Parkin-mediated mitophagy evokes perinatal cardiac mitochondria maturation
SRP058379?DNMT3B4-del Contributes to Aberrant DNA Methylation Patterns in Lung Tumorigenesis
SRP058383RNAi profiling of primary human AML cells identifies ROCK1 as a therapeutic target and nominates Fasudil as an anti-leukemic drug.
SRP058384Direct Induction of Neurons from Various Cell Types by Chemical Defined Medium
SRP058387RNA:DNA hybrids in the human genome have distinctive nucleotide characteristics, chromatin composition, and transcriptional relationships (RNA-seq)
SRP058388Insight into the role of thyroid hormone on neocortex development through global transcriptome analysis of primary cerebrocortical cells: Identification of genes regulated directly and indirectly by triiodothyronine in specific cell types
SRP058390H3K4me3 modification profiling of Huntingtons disease and control human post-mortem prefrontal cortex brain samples
SRP058391RNA:DNA hybrids in the human genome have distinctive nucleotide characteristics, chromatin composition, and transcriptional relationships RDIP-seq)
SRP058392National Surveillance of STEC O157:H7 in England
SRP058393Tissue-specific changes in Tcrb conformation
SRP058395GATA4 represses an ileal program of gene expression in the proximal small intestine by inhibiting the acetylation of histone H3, lysine 27.
SRP058396RUNX1B expression distinguishes megakaryocytic and erythroid lineage fate in adult hematopoiesis
SRP058398Histone methylation by the Kleefstra Syndrome protein EHMT1 mediates homeostatic synaptic scaling.
SRP058408Orpinomyces C1A gene expression analysis grown on multiple plant substrates
SRP058415Genetic variation contribute to different susceptibility to HP-PRRSV infection across pig breeds
SRP058427Genome-wide binding of GATA1 and TAL1 determined at high resolution
SRP058428The identification of differentially expressed genes between animal and vegetal blastomeres in Xenopus laevis
SRP058429Identification of microRNAs involved in cold stress response in grapevine.
SRP058430Promoter targeted bisulfite sequencing reveals DNA methylation profiles associated with low sperm motility in asthenozoospermia
SRP058432Genome-wide chromatin-immunoprecipitation studies of purified SAN cells reveals critical direct targets of ISL1 and suggests potential co-factor families for ISL1 action in SAN cells
SRP058435Activation of proto-oncogenes by disruption of chromosome neighborhoods [RNA-Seq]
SRP058436Activation of proto-oncogenes by disruption of chromosome neighborhoods [ChIP-Seq]
SRP058437Activation of proto-oncogenes by disruption of chromosome neighborhoods [chIA-PET]
SRP058438De novo assembly and transcriptome analysis of Ocimum americanum var. pilosum under low temperature
SRP058443Single Cell Transcriptomics Reveals Multi-Dimensional Heterogeneity in Early Hematopoietic Precursors
SRP058444Genome-wide analysis of enhancers in Drosophila DV patterning
SRP058446Maternal piRNAs are essential for germline development following de-novo establishment of endo-siRNAs in Caenorhabditis elegans
SRP058447Landscape and dynamics of transcription initiation in P. falciparum
SRP058448Translational profiling of RBMX-overexpressed HEK293 cells
SRP058449Piwi is a key regulator of both somatic and germline stem cells in the Drosophila testis
SRP058454Runx1- responsive genes in mdx muscles
SRP058459Dnmt3l-knockout donor cells improve somatic cell nuclear transfer reprogramming efficiency
SRP058460Active chromatin and transcription play a key role in chromosome partitioning into topologi?ally associating domains
SRP058461Thymus Transcriptome Reveals Novel Pathways in Response to Avian Pathogenic Escherichia coli (APEC) Infection
SRP058478Identification of candidate adherent-invasive E. coli signature transcripts by genomic/transcriptomic analysis
SRP058479Gene target specificity of the Super Elongation Complex (SEC) family: How HIV-1 Tat employs selected SEC members to activate viral transcription
SRP058480To Be a Flower or Fruiting Branch: Insights Revealed by mRNA and Small RNA Transcriptomes from Different Cotton Developmental Stages
SRP058491The impact of pregnancy experience on uterine gene expression and decidualization
SRP058498Pioneer factor FOXA1 defines GATA2- and AR-mediated transcriptional program in prostate cancer [ChIP-Seq]
SRP058499Bipartite structure of the inactive mouse X chromosome
SRP058501Time-Resolved Proteomics Extends Ribosome Profiling-Based Measurements of Protein Synthesis Dynamics
SRP058504Characterization of the TCT motif reveals a crucial role of the core promoter micro-environment in gene regulation
SRP058506An Nfic-Hedgehog Signaling Cascade Regulates Tooth Root Development
SRP058513Genome-wide transcription start site mapping of Bradyrhizobium japonicum free-living cells and bacteroids - a rich resource to identify new transcripts, proteins and to study gene regulation
SRP058515Post-licensing specification of eukaryotic replication origins by facilitated Mcm2-7 sliding along DNA
SRP058525Rhizophagus irregularis
SRP058526Transcriptome profiling of differentially expressed genes from floral buds and flowers of male sterile and fertile lines in watermelon
SRP058527Comparative transcriptome analysis in response to heat stress in Arabidopsis thaliana and Arabidopsis lyrata
SRP058531Short RNAs expression profiling in circulating CD34+ cells from Primary Myelofibrosis patients and from normal controls pooled bone marrow CD34+ cells.
SRP058533Comprehensive Epigenomic Analysis Reveals Dynamic Regulatory Programs Of Blood Development (RNA-seq)
SRP058534ELAVL2-regulated transcriptional networks in human neurons link atlernative splicing, autism and human neocortical evolution
SRP058539Comprehensive Epigenomic Analysis Reveals Dynamic Regulatory Programs Of Blood Development (Dnase-Hypersensitivity)
SRP058542MPE-seq, a New Method for the Genome-wide Analysis of Chromatin Structure
SRP058543Comprehensive Epigenomic Analysis Reveals Dynamic Regulatory Programs Of Blood Development (ChIP-seq)
SRP058544Genome-wide mRNA expression analyses revealed dysregulation of genes important for SAN function in Hcn4-CreERT2;Isl1 mutants.
SRP058548Reciprocal Regulation between the Circadian Clock and Hypoxic Signaling in Mammals
SRP058562RNA elements in precursors instruct directional and processive primary piRNA biogenesis
SRP058566Distinct regulatory programs for Sox9 in transcriptional regulation of the developing mammalian chondrocyte [ChIP-seq]
SRP058567Distinct regulatory programs for Sox9 in transcriptional regulation of the developing mammalian chondrocyte [RNA-seq]
SRP058569Aging-dependent demethylation of regulatory elements correlates with chromatin state and improved insulin secretion by pancreatic ß cells
SRP058571Somatic cell fusions reveal extensive heterogeneity in basal-like breast cancer [RNA-Seq]
SRP058575Somatic cell fusions reveal extensive heterogeneity in basal-like breast cancer [ChIP-Seq 3]
SRP058576Transcriptome analysis of Liangshan pig muscle development at the growth curve inflection point and asymptotic stages using digital gene expression profiling
SRP058577Natural variation in non-coding regions underlying phenotypic diversity in budding yeast
SRP058578Comprehensive Epigenomic Analysis Reveals Dynamic Regulatory Programs Of Blood Development (TF ChIP-seq)
SRP058581Mastermind-like 3 controls proliferation and differentiation in neuroblastoma (ChIP-seq)
SRP058585RNA-seq of three tissues (brain, liver, skin) of Nothobranchius furzeri (at age of 12 weeks)
SRP058587The effect of knockdown Abl kinases on breast cancer cells'' global transcriptome
SRP058590RNA-seq of Procr expressing mouse vascular endothelial cells
SRP058595Identification of genes related to embryonal control of yellow seed coat in B. napus
SRP0585977SK-BAF axis controls pervasive transcription at enhancers [GRO-Seq]
SRP0586007SK-BAF axis controls pervasive transcription at enhancers [ChIRP-Seq]
SRP0586017SK-BAF axis controls pervasive transcription at enhancers [ChIP-Seq]
SRP0586027SK-BAF axis controls pervasive transcription at enhancers [ATAC-Seq]
SRP058604Histone genes transcription regulators binding in human cancer (U2OS) and normal (hTERT-RPE1) cells
SRP058608Biofilms of mussel Raw sequence reads
SRP058617Integrated genomics of Crohn’s disease risk variant identifies a role for CLEC12A in antibacterial autophagy
SRP058619RNA-Sequencing experiment for effects of PKF115-584 treatment on four T-ALL cell lines (RPMI8402, HPB-ALL, Jurkat, CCRF-CEM).
SRP058621Modulation effects of nitric oxide on thalidomide treated chicken embryo transcriptome
SRP058623Staphylococcus aureus strain:RKI4 Genome sequencing and assembly
SRP058625MLL4 prepares the enhancer landscape for FoxP3 induction via chromatin looping
SRP058626Comparative transcriptome analysis reveals that ECM-Receptor Interaction contributes to the venous metastases of hepatocellular carcinoma
SRP058628Transcriptome profiles and comparison of Arabidopsis thaliana woody (soc1-ful) and WT (Col-0) stems.
SRP058630Transcriptome-wide identification of LARP4B binding sites in HEK293 cells
SRP058631Allelome.PRO A pipeline to define allele-specific genome features
SRP058635Transcriptional and proteomic analyses of different herbivore-induced responses in a wild soybean line ED059 and a cultivar Tianlong 2
SRP058640Selective Death in Spinal Muscular Atrophy: Genome-Wide RNA-Seq Using Purified Patient-Derived Motor Neurons
SRP0586411,25-Dihydroxyvitamin D3 Controls a Cohort of Vitamin D Receptor Target Genes in the Proximal Intestine That Is Enriched for Calcium Regulating Components (RNA-seq)
SRP058642Phloroglucinol functions as an intercellular chemical messenger with broad transcriptional effects in Pseudomonas protegens
SRP058643Genome-wide profiling of nucleosome sensitivity and chromatin accessibility in D. melanogaster [MNase]
SRP0586441,25-Dihydroxyvitamin D3 Controls a Cohort of Vitamin D Receptor Target Genes in the Proximal Intestine That Is Enriched for Calcium Regulating Components (ChIP-seq)
SRP058645Foodborne Pathgen Survey
SRP058647Mastermind-like 3 controls proliferation and differentiation in neuroblastoma (RNA-seq)
SRP058650A systems level approach reveals new gene regulatory modules in the developing ear
SRP058651damidseq_pipeline: an automated pipeline for processing DamID sequencing datasets
SRP058652Small and large RNA sequencing of mouse livers receiving small hairpin RNAs
SRP058653Sensing Cardiac Electrical Activity with a Cardiomyocyte Targeted Optogenetic Voltage Indicator
SRP058654Circular RNAs are enriched in anucleate platelets and are a signature of transcriptome degradation
SRP058660Genome-wide maps of H3K9me3 and H3K4me3 state in failing heart with or without chaetocin in animal model
SRP058666Genome-wide maps of H3K36me3 in clear cell renal cell carcinoma (ccRCC) [ChIP-seq]
SRP058667RNA sequencing of matched nephrectomy samples [RNA-seq]
SRP058676Potamotrygon amandae and Potamotrygon falkneri transcriptome
SRP058698Comparing effects of perfusion and hydrostatic pressure on human chondrocytes using gene profiles
SRP058699Gene expression of rhabdomyosarcoma cells infected with cytolytic and non-cytolytic variants of coxsackievirus B2 Ohio
SRP058701roX ChIRP-seq in four Drosophila species
SRP058702Genome wide transcriptional alterations during post-infarct remodeling in type 2 diabetic mice.
SRP058703RNA-seq of Drosophila 0-2 hr embryos
SRP058706Cyp27c1 red-shifts the spectral sensitivity of photoreceptors by converting vitamin A1 into A2
SRP058708Proteomic and Genomic Analyses of the Rvb1 and Rvb2 Interaction Network upon Deletion of R2TP Complex Components
SRP058709Transcriptome Profiling of Developing Murine Lens through RNA Sequencing
SRP058710Comparative transcriptome profiling of Arabidopsis lyrata and Arabidopsis thaliana
SRP058711Large scale sequencing of viroid derived small RNA in Potato spindle tuber viroid infected tomato plants
SRP058715Combined heterozygous loss of Ebf1 and Pax5 allows for T-lineage conversion of B-cell progenitors
SRP058716Transcription Dynamically Patterns the Meiotic Chromosome-Axis Interface [ChIP-Seq]
SRP058717The lncRNA LUST promotes CCICs self-renewal stimulating the wnt/b-catenin signaling activation [RNA-Seq]
SRP058718The lncRNA LUST promotes CCICs self-renewal stimulating the wnt/b-catenin signaling activation [RIP-Seq]
SRP058719Long non-coding RNA profiling of human lymphoid progenitors reveals transcriptional divergence of B cell and T cell lineages
SRP058720Methyl-CpG-binding domain (MBD) sequencing of 42 primary neuroblastoma tumors
SRP058722A Molecular Portrait Of High-Grade Ductal Carcinoma In Situ (DCIS) [RNA-seq]
SRP058724Next Generation Sequencing Facilitates Small RNA Mediated Rice Resistance to Xoo
SRP058725Whole transcriptome analysis of brain hippocampal tissue from young and old senescence-accelerated prone SAMP8 mice treated with control diet and J147-containing diet
SRP058740Analysis of human, chimpanzee, macaque and mouse tissue transcriptomes using Next Generation Sequencing
SRP058741Next Generation Sequencing Facilitates Quantitative Analysis of dendritic cell Transcriptomes during LPS response
SRP058746Transcriptional profile of C. elegans following RNAi of elt-2 [L4 stage]
SRP058747Transcriptional profile of C. elegans following over-expression of elt-2 [L4 stage & Day 13]
SRP058751Transcriptional profile of C. elegans following RNAi of elt-2 [L1 stage]
SRP058752Methyl-CpG-binding domain (MBD) sequencing of 45 primary neuroblastoma tumors
SRP058755Mirror bisulfite sequencing – a method for single-base resolution of hydroxymethylcytosine
SRP058759Notch1 dose modulates endothelial gene expression
SRP058760H3K36 mutations promote sarcomagenesis through genome-wide remodeling of H3K36 and H3K27 methylation [RNA_H31K36M_H33LAIMR]
SRP058762Methyl-CpG-binding domain (MBD) sequencing of 15 primary stage 4S neuroblastoma tumors
SRP058765MethlyC-Seq of met18-1(SALK_121963) and met18-2(SALK_147068) mutant
SRP058766Histone H3K36M mutation impairs mesenchymal differentiation and drives sarcoma development [RNA_H33_K36M_HMT]
SRP058767H3K36 mutations promote sarcomagenesis through genome-wide remodeling of H3K36 and H3K27 methylation [Ring1b_ChIP]
SRP058769H3K36 mutations promote sarcomagenesis through genome-wide remodeling of H3K36 and H3K27 methylation [ChIP-Rx]
SRP058770Krimper enforces an antisense bias on piRNA pools by binding AGO3 in the Drosophila germline
SRP058771RNA-seq 1,25(OH)2D3 time course in THP-1 cells
SRP058773Integrative analyses of human reprogramming reveal dynamic nature of induced pluripotency [smartseq2]
SRP058775Dairy cattle archaea raw sequence reads
SRP058777Transcriptomic analysis of cellulolytic fungus Penicillium oxalicum and transcription factor mutant strains in response to different carbon sources
SRP058778FAIRE-seq 1,25(OH)2D3 time course in THP-1 cells
SRP058780Identification and profiling of microRNAs associated with white and black plumage pigmentation in the white and black feather bulbs of ducks by RNA-Sequencing
SRP058782Genome-wide analysis of ATF4 binding in histidinol-treated cells
SRP058783RNA-Seq experiment to identify genes regulated by ATF4
SRP058787Genome-wide maps of human OEC innate immune responses to Burkholderia
SRP058800Global analysis of mouse polyomavirus infection reveals dynamic regulation of viral and host gene expression
SRP058802Naïve iPSCs Generated from ß-thalassemia Fibroblasts Allow Efficient Gene Correction with CRISPR/Cas9
SRP058804Gata6 potently initiates reprogramming of pluripotent and differentiated cells to extraembryonic endoderm stem cells [ChIP-Seq & RNA-Seq]
SRP058811Condensin mediates the chromosomal clustering of highly transcribed genes in bacteria
SRP058817Genome-wide binding data for TRIM24 in androgen-dependent and castration-resistant prostate cancer cells
SRP058819Genome-wide profiling of nucleosome sensitivity and chromatin accessibility to MNase in D. melanogaster [RNA-seq]
SRP058822TET-catalyzed 5-hydroxymethylcytosine regulates gene expression in differentiating colonocytes and colon cancer
SRP058826Genome-wide identification of differentially expressed microRNAs in leaves and the developing head of four durum genotypes during water deficit stress
SRP058827Circulating microRNA and 5' tRNA halves signatures of genotype-by-age interactions in the longlived Ames dwarf mouse.
SRP058828Setd1a and NURF mediate chromatin dynamics and gene regulation during erythroid cell differentiation
SRP058829sRNA sequencing to study assorted processing of synthetic trans-acting siRNAs and its activity in antiviral resistance
SRP058830Transcriptome and translatome landscape of Streptomyces coelicolor M145
SRP058840Integrative analyses of human reprogramming reveal dynamic nature of induced pluripotency [SCRB-Seq]
SRP058841Tunable protein synthesis by transcript isoforms in human cells (Transcript Isoforms in Polysomes sequencing: TrIP-seq)
SRP058842PGC reversion to pluripotency involves erasure of DNA methylation from imprinting control centers followed by locus-specific re-methylation
SRP058844PIWI-interacting RNAs are dysregulated in renal cell carcinoma and associated with tumor metastasis and cancer specific survival
SRP058849Transcriptional profiling of BXD dorsal root ganglia
SRP058850Endothelial Jag1-RBPJK signaling promotes inflammatory leukocyte recruitment and atherosclerosis
SRP058852Histone H3 Lysine4 Acetylation-Methylation Dynamics Define Breast Cancer Subtypes [ChIP-seq]
SRP058853Comparative genomics provides insight into the diversity of the attaching and effacing Escherichia coli (AEEC) virulence plasmids
SRP058856The apoptotic network and expression of BH3-containing proteins predict phenotypic response to BET bromodomain inhibitors
SRP058859Specificity quantification of Glucocorticoid receptor binding using high-throughput sequencing
SRP058860Nonsense-Mediated Decay restricts lncRNAs levels in yeast unless blocked by double-stranded RNA structure
SRP058871Distinct Function for ASCL1 and NEUROD1 in Pulmonary Neuroendocrine Tumors (RNA-seq)
SRP058872Distinct Function for ASCL1 and NEUROD1 in Pulmonary Neuroendocrine Tumors (ChIP-seq)
SRP058873The ISW1 and CHD1 ATP-dependent chromatin remodelers compete to set nucleosome spacing in vivo
SRP058876Paphia textile Raw sequence reads
SRP058891Interactions of melanoma cells with distal keratinocytes trigger metastasis via Notch signaling inhibition of MITF
SRP058904Transcriptomic characters of different pregnancy outcomes in CpG-induced nonobese diabetic mice and wild-type controls
SRP058910Ribosome profiling study of rli1 depeletion strain
SRP058911Fra-1 is a key driver of colon cancer metastasis and a Fra-1 classifier predicts disease-free survival
SRP058915Developmental regulation of piRNAs during spermatogenesis in Drosophila melanogaster
SRP058916Finding missing proteins from epigenetically manipulated human cells
SRP058919Genome-wide identification of FHY3 binding sites in Arabidopsis floral organ (ChIP-Seq)
SRP058920Genome-wide identification of FHY3 binding sites in Arabidopsis floral organ (RNA-Seq)
SRP058921High-resolution mapping of H4K16 and H3K23 acetylation reveals conserved and unique distribution patterns and functions in Arabidopsis and rice
SRP058923The 1KITE project: evolution of insects
SRP058932The 1KITE project: evolution of insects
SRP058934The 1KITE project: evolution of insects
SRP058939Telomere Binding Protein TRB1 Preferentially Associates with Promoters of Translation Machinery genes
SRP058941The protein and transcript profiles of human semen
SRP058942Production of functional small interfering RNAs by human Dicer
SRP058943Analysis of the transcriptome of the pulp of a spontaneous late-ripening sweet orange mutant and its wild type improves our understanding of fruit ripening in citrus
SRP058950Regulatory landscape fusion in rhabdomyosarcoma by interactions between the PAX3 promoter and FOXO1 regulatory elements
SRP058951Crohn''s disease risk variant in GPR65 alters lysosomal function
SRP058953Impact of NOD2 Genotype on the Innate Monocyte Transcriptome in Crohn's Disease
SRP058966Transcriptomic measurements of Nannochloropsis oceanica CCMP1779 through a light:dark cycle
SRP058967Regulation of gene expression during the onset of ligninolytic oxidation by Phanerochaete chrysosporium on colonized wood
SRP058975Daytime soybean transcriptome fluctuations during water deficit stress
SRP058976RNA Proximity Ligation to Resolve Intramolecular RNA Structures in situ
SRP058977Combined ultra-low input mRNA and whole-genome sequencing from human embryonic stem cells
SRP058978Small RNA profile of pelo1/+ and peloPB60/1 ovaries
SRP058979RAG Represents a Widespread Threat to the Lymphocyte Genome - (RNA-seq)
SRP058980RAG Represents a Widespread Threat to the Lymphocyte Genome - (Mnase-seq)
SRP058981RAG Represents a Widespread Threat to the Lymphocyte Genome - (ChIP-seq)
SRP058984Deficiency of microRNA miR-34a in pluripotent stem cells expands cell fate potential
SRP059015Musk microbiota 16S rRNA sequencing project
SRP059026Control of stomach smooth muscle development and intestinal rotation by transcription factor BARX1 (ChIP-seq)
SRP059027SETDB1 Represses Endogenous and Exogenous Retroviruses in B Lymphocytes [RNA-Seq]
SRP059028Chromatin-associated RNA-seq in MCF-7
SRP059029Bisulfite sequencing coupled to target enrichment in MCF-7
SRP059030Reducing Cytoplasmic Polyamine Oxidase Activity in Arabidopsis Increases Salt and Drought Tolerance by Reducing Reactive Oxygen Species Production and Increasing Defense Gene Expression.
SRP059031Transcriptome analysis of Jurkat T-ALL clones from control and CBAP-knockdown/knockout sets
SRP059032EHMT1 and EHMT2 inhibition induce fetal hemoglobin expression [ChIP-seq]
SRP059033mRNA sequencing of the global effect of SOX2 on gene expression in hESC and hESC derived NPCs.
SRP059034Genome-wide map of SOX2 occupancy in human ES cells (hESCs) and hESC derived neural progenitor cells (hNPCs)
SRP059035Single-cell RNA sequencing of lung adenocarcinoma patient-derived cells
SRP059037Multi-dimensional histone modifications for coordinated regulation of gene expression under hypoxia [ChIP-Seq]
SRP059039Elucidating the etiology and molecular pathogenicity of infectious diarrhea by high throughput RNA sequencing
SRP059042Affinity and Dose of TCR Engagement Yield Proportional Enhancer and Gene Activity in CD4+ T Cells
SRP059044RNA-Seq analysis of glycosylation related gene expression in STZ-induced diabetic rat kidney inner medulla
SRP059045Oryzias latipes
SRP059057Transcriptome analysis of CD4+ T cells reveals imprint of BACH2 and IFN? regulation
SRP059058Epigenetic (re)programming of caste-specific behavior in the ant Camponotus floridanus
SRP059062Next Generation Sequencing of PKD2 mutant mice kidneys
SRP059064Detection of Enhancer-Associated Rearrangements Reveals Mechanisms of Oncogene Dysregulation in B-cell Lymphoma [ChIP-Seq]
SRP059066Combinatorial Regulation Mediated by Biochemically Distinct Forms of SWI/SNF [RNA-Seq]
SRP059067Combinatorial Regulation Mediated by Biochemically Distinct Forms of SWI/SNF [ChIP-Seq]
SRP059069Novel and Conserved microRNAs in soybean floral whorls
SRP059070Identifying salt stress-responsive miRNAs and their targets in soybean (microRNA)
SRP059071Identifying salt stress-responsive miRNAs and their targets in soybean (mRNA)
SRP059072High-throughput transcriptome sequencing analysis provides insights into preliminary biotransformation mechanism of Rhodopseudomonas palustris treated with alpha-rhamnetin-3-rhamnose
SRP059075Circulating extracellular microRNAs predictive of human liver allograft status.
SRP059078Musashi-2 Post-transcriptionally Attenuates Aryl Hydrocarbon Receptor Signaling to Expand Human Hematopoietic Stem Cells
SRP059079Target discrimination in nonsense-mediated mRNA decay requires Upf1 ATPase activity (CLIP-Seq)
SRP059080Target discrimination in nonsense-mediated mRNA decay requires Upf1 ATPase activity (RIP-Seq)
SRP059136Progesterone receptor transcriptome and cistrome in decidualized human endometrial stromal cells [ChIP]
SRP059137FOXO1 is required for binding of PR on IRF4, novel transcriptional regulator of endometrial stromal decidualization [ChIP]
SRP059138Endometrial Expression of Steroidogenic Factor 1 Promotes Cystic Glandular Morphogenesis
SRP059152SOX2 O-GlcNAcylation alters its protein-protein interactions and genomic occupancy to modulate gene expression in pluripotent cells[ChIP-seq]
SRP059153BisPCR2 method for targeted bisulfite sequencing
SRP059158Escherichia coli strain:C43(DE3) Genome sequencing and assembly
SRP059170Gene expression analysis of CD4+ and CD4- ILC1 subsets by RNAseq
SRP059172Refining brucellosis diagnosis by blood transcriptional profiling.
SRP059176Transcriptome analysis of PC9 cells with gefitinib or/and hypoxia treatment and comparison with gefitinib resistant PC9 cells and ALDH positive PC9 cells
SRP059186Capture Hi-C reveals novel candidate genes and complex long-range interactions with related autoimmune risk loci
SRP059187Ribosome profiling analysis of Dengue Virus
SRP059190Genome wide mapping of H3K27me3 in differentiated mouse podocytes
SRP059191Identification of CEBPD regulated genes in MCF7 cells
SRP059195Metabolic Regulation of Gene Expression by Histone Lysine ß-hydroxybutyrylation [ChIP-seq]
SRP059196Metabolic Regulation of Gene Expression by Histone Lysine ß-hydroxybutyrylation [RNA-seq]
SRP059197An orthologous epigenetic gene expression signature derived from differentiating embryonic stem cells identifies regulators of cardiogenesis
SRP059205Landscape of Hematopoiesis Described in Induced Pluripotent Stem Cells and Human Bone Marrow
SRP059207Somatic Primary piRNA Biogenesis Driven by Cis-Acting RNA Elements and Trans- Acting Yb
SRP059210Transcriptome of Plasmodium berghei wildtype parasites and KIN knockout parasites [RNA-seq]
SRP059217RNA-seq identifies novel lncRNAs involved in vascular smooth muscle cell proliferation
SRP059218Altered gene expression associated with thermo-sensitive male sterility in rapeseed (Brassica napus) mutant SP2S
SRP0592273D Chromosome Regulatory Landscape of Human Pluripotent Cells [ChIAPET]
SRP059228ChIP-seq of TIP60 complex
SRP0592313D Chromosome Regulatory Landscape of Human Pluripotent Cells [ChIP-Seq]
SRP059232Effects of Drought and Flooding on Herbivore-Triggered Transcriptomic Response in Solanum dulcamara
SRP059233Genome-wide DNase-seq profiling of Saccharomyces cerevisiae (W303 strain)
SRP059236Dichloroacetate (DCA) prevents cisplatin-induced nephrotoxicity without compromising its anti-cancer properties.
SRP059237Chromosomal deletions linked to p53 loss of heterozygosity promote cancer through p53-independent mechanisms
SRP059242An Alternative Splicing Event Amplifies Evolutionary Differences Between Vertebrates
SRP059245Transcriptomic profiling of HeLa cells treated with miR-let-7i-3p and control-miR
SRP059246Comparative Characterization of Cardiac Development Specific microRNAs: Fetal Regulators for Future
SRP059249A CRISPR-based screen identifies genes essential for West Nile virus-induced cell death
SRP059252A systematic analysis of the time series gene expression in TGF-beta induced EMT by Next-generation sequencing
SRP059253Roles of Yap1 in mouse embryonic stem cells
SRP059254SMARCA4/Brg1 Coordinates Genetic and Epigenetic Networks Underlying Shh-type Medulloblastoma Development [ChIP-Seq]
SRP059255SMARCA4/Brg1 Coordinates Genetic and Epigenetic Networks Underlying Shh-type Medulloblastoma Development [gene expression]
SRP059256Tip60 complex binds to active Pol II promoters and a subset of enhancers and co-regulates the c-Myc network in mouse embryonic stem cells
SRP059257RNA polymerase II is trapped in initiation states on non-coding RNA transcripts
SRP059266TALENs-mediated gene disruption of FLT3 in leukemia cells: Using genome-editing approach for exploring the molecular basis of gene abnormality
SRP059267Transcriptomic analysis of rapeseed (Brassica napus) flower buds exposure to male gametocide amidosulfuron
SRP059268Integrated Transcriptomic and Epigenomic Comparison of Human Induced Pluripotent Stem Cells Generated from Various Reprogramming Methods
SRP059269Usv101 is a key regulator of cryptococcal virulence and determinant of host response
SRP059270Transcriptome Engineering Promotes a Fermentative Transcriptional State
SRP059275Wnt addiction of genetically defined cancers reversed by PORCN inhibition
SRP059277Transcriptome-wide mapping of RNA:protein interactions of seven SR proteins and NXF1 in P19 cells by iCLIP
SRP059278MicroRNA 19a replacement partially rescues fin and cardiac defects in zebrafish model of Holt Oram syndrome [miRNA-seq]
SRP0592793D Chromosome Regulatory Landscape of Human Pluripotent Cells [RNA-Seq]
SRP059281Psh1-mediated Proteolysis Prevents the Budding Yeast Centromeric Histone Variant from Mislocalizing to Promoter Nucleosomes [ChIP-Seq]
SRP059283RNA-Seq and microarray analysis of the Xenopus inner ear transcriptome discloses orthologous OMIM® genes for hereditary disorders of hearing and balance
SRP059284Comparative analysis of cotton small RNAs in response to salt stress
SRP059285Tissue homogeneity requires inhibition of unequal gene silencing during development
SRP059287Conversion of Human Gastric Epithelial Cells to Multipotent Endodermal Progenitors using Defined Small Molecules [gene expression]
SRP059289Conversion of Human Gastric Epithelial Cells to Multipotent Endodermal Progenitors using Defined Small Molecules [DNA methylation]
SRP059292Generation of Cynomolgus Monkey Chimeric Fetuses Using Embryonic Stem cells
SRP059294NOVA2 and NOVA1 HITS-CLIP in wild-type mouse cortex (E18.5)
SRP059295RNAseq in E18.5 wild-type, Nova2-KO, and Nova1-KO mouse cortex and mid- and hind-brain
SRP059296Gene expression analyses and distribution of H3K4me3 modification during eosinophil development (GMP to EoP to Eosinophil)
SRP059298microRNA sequencing in kidney glomeruli from diabetic and control mice
SRP059302Expression data from fully engorged Haemaphysalis flava ticks (FE) midgut and partially engorged Haemaphysalis flava ticks (PE) midgut (MGs)
SRP059303piwi mutations and c-Fos overexpression on Drosophila ovarian germline
SRP059314Otx2 controls regional patterning within the MGE and regional identity of the septum [ChIP-Seq]
SRP059315Myocardin-related transcription factors are required for cardiac development and function
SRP059318Determination of astrocyte transcripts regulated by neuronal contact
SRP059319Transcriptome and/or marker frequency analysis of S. pneumoniae (control vs. HPUra/Kanamycin/Ciprofloxacin/Hydroxyurea/Rifampicin)
SRP059321Knockdown of SR protein family in P19 cells and RNA-seq of cytoplasmic and whole cell polyA+ RNA
SRP059322Recurrent alterations of TNFAIP3 (A20) in T-cell large granular lymphocytic leukemia
SRP059324Gene expression analysis of human cell lines established from normal patient''s fibroblast and BWS patients with known mutations in the CDKN1C and KCNQ1OT1
SRP059327Gene body H2B1ub regulates RNA Polymerase II pause release and is not needed for transcription elongation
SRP059328Genome-wide binding profiles of an artificial zinc finger protein with or without a KLF3 functional domain
SRP059329Menin-MLL inhibitors block oncogenic transformation by MLL fusion proteins in a fusion partner independent manner
SRP059331Gene expression analysis of mice liver tumors isolated from ß2SP+/-; SMAD3+/- mice
SRP059332Sex-specific chromatin accessibility profiling in human PBMCs
SRP059333Anilis and Subulata raw reads transcriptome
SRP059334Long non-coding RNA landscape in human monocytes
SRP059336CLIP-seq analysis of cytoplasmic poly(A) binding protein-1 reveals binding to genomically encoded sequences within mammalian mRNAs
SRP059337Gene expression profiling of six MEF cell genotypes (wild type, ß2SP+/-, ß2SP-/-, SMAD3+/-, SMAD3-/-, and ß2SP+/-; SMAD3+/-)
SRP059338Decreased TFR/TFH ratio in SIV-infected rhesus macaques may contribute to accumulation of TFH cells in chronic infection
SRP059339Regulation of Transcription Factor Yin Yang 1 by SET7/9-mediated Lysine Methylation [GRO-Seq]
SRP059340Regulation of Transcription Factor Yin Yang 1 by SET7/9-mediated Lysine Methylation [ChIP-Seq]
SRP059343Transcriptome Analysis of Avicel Utilization by Thermomyces lanuginosus
SRP059344Fluidigm C1 + Illumina HiSeq quantitative whole transcriptome analysis of unsorted population of E16.5 lung cells
SRP059358The influence of the estrous cycle on sex differences in the rat adult medial prefrontal cortex transcriptome [RNA-Seq]
SRP059359Comparison of endogenous tRNA expression levels from cells expressing and sgRNA from either a U6 or tRNA promoter
SRP059363Epigenome-wide analysis of DNA methylation in lung tissue shows concordance with blood studies and identifies tobacco smoke-inducible enhancers
SRP059364Histone H3.3 maintains genome integrity during mammalian development
SRP059365The influence of the estrous cycle on sex differences in the rat adult medial prefrontal cortex transcriptome [ChIP-Seq]
SRP059366Cistrome of the Aldosterone-activated Mineralocorticoid Receptor in Human Renal Cells
SRP059367A fully validated blood stem/progenitor cell regulatory network reveals mechanisms of cell state stabilisation
SRP059369Genome-wide ChIP-seq analysis of Pou3f1 during mouse pluripotent stem cell neural fate commitment
SRP059370RNA-seq profiling of cortical collecting ducts in rats undergoing vasopressin escape
SRP059372RNA-Seq analysis facilitates quantitative analysis to identify genes in hepatic tissue of partially hepatectomized rats regulated by ASCs-miR27b introduction in comparison with ASCs-siRNC or saline controls
SRP059374Transcriptome profiling of the defense response following elicitation by a bacterial pathogen or flg22
SRP059375Norovirus GII.4 isolate:Minerva_2006 Raw sequence reads
SRP059377Deep sequencing reveals mRNA recruitment in translation initiation
SRP059378Gene expression in wild-type vs. G2 -77 enhancer knockout myeloid progenitors
SRP059379Single cell transcriptomics analysis of induced pluripotent stem cell-derived cortical neurons reveals frequent dual layer identity
SRP059385Roles of Cofactors and Chromatin Accessibility in Hox Protein Target Specificity
SRP059386GATA2 knockout study to investigated the role of GATA2 in human hematopoiesis
SRP059388CTCF binding profiles in MEF cells
SRP059390Ribosome profiling analysis of GADD34 null cells
SRP059391Insights into the adaptive stress response of Arabidopsis thaliana to thermal stress by ribosomal profiling
SRP059402Study of microbial diversity in rhizosphere soil
SRP059409Terebrid transcriptome reads
SRP059412Mutational Interference Mapping Experiment (MIME) to identify the binding site of the HIV-1 Pr55Gag protein to the HIV-1 genomic RNA
SRP059413Critical role of histone turnover in neuronal transcription and plasticity [ChIP-seq]
SRP059415Critical role of histone turnover in neuronal transcription and plasticity [RNA-seq]
SRP059416Integrated microRNA-mRNA transcript analysis reveals microRNAs regulating therapy resistant diffuse large B-cell lymphoma
SRP059418Silencing of pericentric heterochromatin associated with SIRT6-dependent H3K18 deacetylation protects against mitotic errors and cellular senescence
SRP059421Transcriptome analysis of 100-day fetal skin revealing the differences of skin pigmentation in goats
SRP059427Transcriptome-Based Network Analysis on Gene Expression Regulated by CO2 Deprivation in Chlorella pyrenoidosa
SRP059428Critical modulation of hematopoietic lineage fate by the PAR/bZIP transcription factor Hepatic Leukemia Factor
SRP059429Transcriptomic analysis of the estrogenic effect of soy protein isolate in rat uterus
SRP059431Perturbations of PIP3 signaling trigger a global remodeling of mRNA landscape and reveal a transcriptional feedback loop
SRP059433Global and Targeted DNA Demethylation during iPSC Reprogramming
SRP059434Biomarker discovery: Quantification of microRNAs and other small non-coding RNAs using next generation sequencing
SRP059435The E3 SUMO ligase Mms21 controls ribosome biogenesis
SRP059436Genome wide binding sites of NsrR in uropathogenic E.coli CFT073
SRP059437Nitrosative stress response in uropathogenic Escherichia coli (UPEC)
SRP059442Transcriptomic profiling of BRC+, BRC-, DRC+ and DRC- FACS-sorted samples
SRP059443Reversal of microRNA-150 silencing disadvantages crizotinib-resistant NPM-ALK-positive cell growth.
SRP059444Inverse relationship between microRNA-155 and -184 expression with increasing conjunctival inflammation during ocular Chlamydia trachomatis infection
SRP059445CENP-T and CENP-C bridge adjacent CENP-A nucleosomes on young alpha-satellite dimers
SRP059447Genome-wide maps of nuclear lamina interactions in single human cells. (Hi-C, KBM7 haploid)
SRP059448Illumina Total RNA-seq in HeLa
SRP059466Different fermentation stage of Daqu metagenome
SRP059467Polynucleotide phosphorylase can interact with small noncoding RNAs in both stabilizing and degradative modes
SRP059485Critical modulation of hematopoietic lineage fate by Hepatic Leukemia Factor
SRP059486Selective influence of Sox2 on POU transcription factor binding in embryonic and neural stem cells
SRP059487Next Generation RNAseq of neonatal hearts one day post surgery comparing sham, apical resection or apical resecection plus vagotomy treatments
SRP059489IL-22 impedes the proliferation of Schwann cells and influence nerve regeneration
SRP059492Study of gene expression changes in TH-MYCN murine neuroblastomas in response to 24hr of panobinostat treatment
SRP059493Survival and Diversity of Human Homologous Dietary MicroRNAs in Conventionally Cooked Top Sirloin and Dried Bovine Tissue Extracts
SRP059494EP400 is required for Max and MCPyV mediated gene activation
SRP059497MCPyV ST, MAX and the TRRAP complex cooperate to bind to Transcription Start Sites
SRP059498Overproduction of indole-3-acetic acid in free-living rhizobia mimics physiological conditions required for nitrogen fixation inside root nodules
SRP059502Genome-wide analysis of ADP-ribosylation by ADPr-ChAP reveals its association with chromatin after oxidative stress
SRP059503Nicrophorus vespilloides Genome sequencing and assembly
SRP059505PAR-TERRA RNA directs homologous sex chromosome pairing
SRP059506Triple Inhibition of TGFb/BMP/GSK3 Signaling in Human Pluripotent Stem Cells Generates PAX6- Neural Progenitors with robust Self-renewal
SRP059508The Epigenomic Landscape of Prokaryotes
SRP059509Genome-wide Circadian Control of Transcription at Active Enhancers Regulates Insulin Secretion and Diabetes Risk
SRP059511Cellular androgen content influences enzalutamide agonism of F877L mutant androgen receptor
SRP059512Mapping of variable DNA methylation across multiple cell types defines a dynamic regulatory landscape of the human genome
SRP059513AE9aId1fl/flCreER cells
SRP0595305-hydroxymethylcytosine poises expression of genes involved in hematopoietic differentiation
SRP059531The transcription and translation landscapes during human cytomegalovirus infection reveal novel host-pathogen interactions
SRP059538Age- and Obesity Induced Decline of Brown Fat Function as Consequence of Impaired miR-328 Dependent Silencing of Bace1
SRP059542Generation of a Panel of Induced Pluripotent Stem Cells From Chimpanzees: a Resource for Comparative Functional Genomics [ChIP-Seq]
SRP059546Ribosome profiling of control and leucine-starved SUM159 cells
SRP059547Ribosome profiling of MCF10A cells treated with TGFb and esterified leucine
SRP059548Ribosome profiling on glutamine-starved panel of luminal and basal breast cancer cell lines
SRP059549Single-cell RNA-seq reveals activation of unique gene groups as a consequence of stem cell-parenchymal cell fusion
SRP059552Histone variant 3 regulates RNA polymerase II transcription termination and dual strand transcription of siRNA loci in Trypanosoma brucei
SRP059555Comparison of the transcriptome and chromatin state between human cord blood HSC and human iPSC derived hematopoietic progenitor using next-generation sequencing
SRP059558Small RNA-seq during the ecdysone and heat-shock response in Drosophila Kc167 cells
SRP059561PRMT5 is essential for sustaining normal adlut hematopoiesis
SRP059571Identification of alternative splicing events by RNA sequencing in tomato
SRP059586Genome-wide analysis of embryonic gene epression in the absence of Prox1 compared to wild type
SRP059588RNA-seq performed on FFPE sarcoma blocks
SRP059590Poised chromatin and bivalent domains facilitate the mitosis-to-meiosis transition in the male germline
SRP059593Comparison of glucocorticoid receptor (NR3C1) binding in wild type and Klf15-/- MEFs
SRP059595Genomic Analysis Reveals Distinct Mechanisms and Functional Classes of SOX10-Regulated Genes in Melanocytes [ChIP-Seq]
SRP059596Calorie restriction suppresses age-dependent hippocampal transcriptional signatures.
SRP059598The transcriptional basis of a developmental transition from brown to white adipose tissue.
SRP059602Mouse ES cells expressing catalytically inactive Ring1B display impaired Ring1B and H3K27me3 deposition.
SRP059605Transcriptome comparison reveals a genetic network regulating the lower temperature limit in fish
SRP059606CTCF ChIP-seq in human monocytic THP-1 cells with replicates (4)
SRP059609RNA-Sequencing of primary myoblasts from mice with a satellite cell specific knockout of the histone demthylase UTX/KDM6A
SRP059610GATA1-deficient dendritic cells display impaired CCL21-dependent migration towards lymph nodes due to reduced levels of polysialic acid
SRP059611Transcriptome of mouse preimplantation development [Rlim KO]
SRP059622BCL6 evolved in vertebrates as a stress tolerance gene and is broadly used by cancer cells to adapt to stress
SRP059623Fine-mapping of DNA modifications in the lactase gene region of humans and mice
SRP059625Global gene expression profiles of Mycobacterium smegmatis under shock and mild nutrient starvation
SRP059626Genome-wide DNA methylation profiling reveals epigenetic changes in the rat nucleus accumbens associated with cross-generational effects of adolescent THC exposure
SRP059630Function of deubiquitinase USP21 in mouse embryonic stem cell [RNA-Seq]
SRP059632A Molecular Portrait Of High-Grade Ductal Carcinoma In Situ (DCIS) [RRBS-seq]
SRP059643Ubiquitin-dependent turnover of MYC promotes loading of the PAF complex on RNA Polymerase II to drive transcriptional elongation (RNA-seq)
SRP059644Ubiquitin-dependent turnover of MYC promotes loading of the PAF complex on RNA Polymerase II to drive transcriptional elongation (ChIP-seq)
SRP059648Transcriptome profile of liver at different physiological stages in laying hens
SRP059650A screen for cis-regulatory elements for murine miR-142 using an sgRNA library prepared by Molecular Chipper technology
SRP059653RNA-seq profiling of glomeruli, S1 proximal tubule, and the whole kidney of uninephrecomized rats
SRP059663LECT2 effect on the bone marrow cells of mice
SRP059664Spontaneous transformation of murine oviductal epithelial cells: A model system to investigate the onset of fallopian-derived tumors
SRP059669Expression profiles of innate and Th2 lymphocytes   
SRP059670Multiphasic and dynamic changes in alternative splicing during induction of pluripotency are coordinated by numerous RNA binding proteins [iPS]
SRP059674MLX transcriptional regulation in muscle cells
SRP059676Next Generation RNA-Sequencing data of Hematopoietic stem cells and CML stem cells
SRP059677Rec8 ChIP-Seq experiment to analyse cohesin localisation in the Ctf19c mutants during meiotic prophase.
SRP059678ChIP-Seq experiment to analyse Zip1 localisation in the Ctf19c mutants during meiotic prophase.
SRP059679The role of PCNA ubiquitylation during unperturbed genome replication in S.pombe
SRP059681Adaptive aneuploidy protects against thiol peroxidase deficiency by increasing respiration via key mitochondrial proteins
SRP059682Parallel analysis of 5''-RNA ends in PSTVd-I inoculated tomato plants
SRP059683Genome-wide CRISPR-Cas9 screens reveal loss of redundancy between PKMYT1 and WEE1 in Glioblastoma stem-like cells
SRP059687Oncogenic deregulation of EZH2 as an opportunity for targeted therapy in lung cancer [ChIP-Seq]
SRP059688Oncogenic deregulation of EZH2 as an opportunity for targeted therapy in lung cancer [RNA-Seq]
SRP059689Lack of allergy to timothy grass pollen is not a passive phenomenon but associated with allergen specific modulation of immune reactivity
SRP059691Role of SMAR1 in global gene regulation through interaction with tumor suppressor p53
SRP059692Nuclear HNRNPA2B1 HITS-CLIP and RNA-seq
SRP059693Parallel analysis of 5''-RNA ends in PSTVd-RG1 inoculated tomato plants
SRP059694Transcriptome response of Chlamydomonas reinhardtii exposed to methylmercury (MeHg)
SRP059695RNA-Seq analysis of human neutrophils isolated by different protocols (Polymorphprep and negative selection) and incubated with and without in vitro cytokine stimulation
SRP059699Canonical Wnt signalling regulates nuclear export of Setdb1 during skeletal muscle terminal differentiation [RNA-seq]
SRP059700RING1 links retinoic acid signaling to the early proximal-distal specification of forelimb bud via Meis2 repression (ChIP-Seq)
SRP059701Androgen receptor programming in human tissue implicates HOXB13 in prostate pathogenesis [RNA-Seq]
SRP059702Chromatin immunoprecipitation sequencing of heterochromatin-associated proteins in Tetrahymena
SRP059704DNA elimination analysis of Tetrahymena cells defective in heterochromatin body formation
SRP059712RNA sequencing of mechanically strained NHEKs and control NHEKs
SRP059713RNA-seq analysis of gene expression after exposure to hot and cold stress in WT cells of Thermosynechococcus elongatus, BP-1
SRP059720Whole genome analysis of the methylome and hydroxymethylome in normal and malignant lung and liver [RNA-Seq]
SRP059724RNA-seq time-course analysis of the transcriptional dynamics of the two root-infecting fungi Colletotrichum tofieldiae (mutualistic) and Colletotrichum incanum (pathogenic) and their plant host Arabidopsis thaliana during root colonization
SRP059725Directional RNA-Seq analysis of Arabidopsis plants grown under Pi-deprived conditions
SRP059726Differential gene expression in developing grains of two tropical indica rice genotypes differing in grain iron concentration through RNA-seq
SRP059727Large scale sequencing of PSTVd-I sRNA in tomato plants
SRP059729Transcriptome analysis of aflatoxin B1 (AFB1) induced hepatocellular carcinoma (HCC) and AFB1 resistant liver sample from rats
SRP059731The histone H3 lysine 4 presenter WDR5 induces N-Myc target gene transcription and promotes neuroblastoma [ChIP-Seq]
SRP059732Apoptosis enhancing drugs overcome innate platinum resistance in CA125 negative tumor initiating populations of high grade serous ovarian cancer
SRP059733Generation of low passage high grade serous ovarian cancer cell lines from primary tumors
SRP059735The role of antigen presenting cells in the induction of HIV-1 latency in resting CD4+ T-cells
SRP059736Next Generation Sequencing Facilitates Quantitative Analysis of Wild Type, DDX5 knockout, RORc knockout, RmrpG262T knockin T helper 17 cell Transcriptomes [RNA-seq]
SRP059737Transcriptional expression level during exponential growth phase in Kluyveromyces marxianus
SRP059738Next Generation Sequencing Facilitates Quantitative Analysis of RNAs bound by DDX5 and RORgt in cultured T helper 17 cell [RIP-seq]
SRP059739Transcription Dynamically Patterns the Meiotic Chromosome-Axis Interface
SRP059740Evolutionary suppression of erythropoiesis via the modulation of TGF-ß signaling in an Antarctic icefish
SRP059741Functional analysis of chicken IRF7 in response to dsRNA analog poly(I:C) by integrating overexpression and knockdown
SRP059743RNA sequencing analysis of DAF-16 target gene expression when math-33 function is genetically inactivated
SRP059744Identification of mRNAs Regulated in Response to Transcriptional Activation of the Arabidopsis ABA INSENSITIVE GROWTH 1 (ABIG1) Transcription Factor cDNA
SRP059745Deep sequencing and de novo assembly of the mouse oocyte transcriptome define the contribution of transcription to the DNA methylation landscape.
SRP059746The epigenetic and transcriptional basis of a developmental transition from brown to white adipose tissue
SRP059749BMP signaling differentially regulates distinct hematopoietic stem cell types
SRP059750RNA-SEQ of Satb1-knockdown in dopaminergic neurons from the mouse mid-brain
SRP059752The transcription factors SOX9 and SOX5/SOX6 cooperate genome-wide through super-enhancers to drive chondrogenesis (RNA-Seq)
SRP059753Adipose Rab10 Knockout Causes Insulin Resistance through Impaired Glucose Uptake
SRP059754Signaling through MyD88 in bone marrow-derived cells promotes gastric tumorigenesis by inducing the TLR2/CD14 pathway in tumor cells
SRP059755The transcription factors SOX9 and SOX5/SOX6 cooperate genome-wide through super-enhancers to drive chondrogenesis (ChIP-Seq)
SRP059756Regulation of nucleosome positioning by a CHD Type III chromatin remodeller and its relationship to developmental gene expression in Dictyostelium [MNase-seq]
SRP059757Regulation of nucleosome positioning by a CHD Type III chromatin remodeller and its relationship to developmental gene expression in Dictyostelium [RNA-seq]
SRP059758A-type lamins bind both hetero- and euchromatin, the latter being regulated by lamina-associated polypeptide 2alpha [gene expression]
SRP059762Time course of androgen-regulated transcripts in LNCaP cells
SRP059772Whole genome analysis of the methylome and hydroxymethylome in normal and malignant lung and liver [oxBS-Seq and BS-Seq]
SRP059775C1 analysis using mixtures of human (HEK) and mouse (3T3) cells
SRP059776A transcriptome map of Actinobacillus pleuropneumoniae at single-nucleotide resolution using RNA-seq
SRP059777Nuclear Transfer nTreg model reveals fate-determining TCRbeta and peripheral nTreg precursors
SRP059779Dietary selenium levels affect selenoprotein expression and support the interferon-? and IL-6 immune response pathways in mice [RNA-Seq]
SRP059780Dietary selenium levels affect selenoprotein expression and support the interferon-? and IL-6 immune response pathways in mice [Ribosome Profiling]
SRP059781Chromatin targets of androgen receptor and PIAS1 in molecular apocrine breast cancer cells [ChIP-seq]
SRP059786USDA-FSIS: Isolated strains of Campylobacter spp. genome sequencing
SRP059787Selectivity of ORC binding sites in the human genome and the relation to replication timing, fragile sites, and recurrent deletions in cancers
SRP059788Large scale sequencing of PSTVd-RG1 sRNA in tomato plants
SRP059790Identification of Global DNA Methylation Signatures in Glioblastoma-Derived Cancer Stem Cells
SRP059793Comparison of Hi-C results using in-solution versus in-nucleus ligation
SRP059796Genome wide chromatin modification associated with the developmental transition from brown to white adipose tissue
SRP059799Loss of the yeast SR protein Npl3 alters gene expression due to transcription readthrough
SRP059800Human and mouse DRIP-seq and DRIPc-seq
SRP059801The microRNA signature of mouse spermatozoa is dynamically modified during epididymal maturation
SRP059802Analysis of the microRNA expression profile in the mouse epididymis detected by next generation sequencing
SRP059803Uptake and function studies of maternal milk-derived miRNAs
SRP059804Identification of candidate thermotolerance genes during early seedling stage in upland cotton (Gossypium hirsutum L.) revealed by comparative transcriptome analysis
SRP059806MicroRNA-31 regulates endothelial-to-mesenchymal transition and associated secretory phenotype induced by TGF-ß
SRP059811Variable glutamine-rich repeats modulate the function of the transcriptional regulator SSN6
SRP059812Megasphaera sp. MH Transcriptome or Gene expression
SRP059824An essential role for the Gai2 protein in Smoothened-stimulated mammary epithelial cell proliferation
SRP059825Rocaglamide A converts RNA helicase eIF4A into a sequence-specific translational repressor
SRP059831rDNA chromatin interactions in the MYC-driven Eµ-Myc transgenic mouse model of B-cell lymphoma [RNA-seq]
SRP059832rDNA chromatin interactions in the MYC-driven Eµ-Myc transgenic mouse model of B-cell lymphoma [4C-seq]
SRP059833Aspergillus fumigatus in blood reveals a "just wait and see" resting stage behavior
SRP059834Histone variant 3 regulates RNA polymerase II transcription termination and dual strand transcription of siRNA loci in Trypanosoma brucei
SRP059835The EGF Receptor Ligand Amphiregulin Controls Cell Division via FoxM1
SRP059836Genomics insights into high pressure adaptation in a Thermococcus sp. from the world’s deepest hydrothermal vents
SRP059842Conversion of Fibroblasts into Functional Trophoblast Stem-like Cells
SRP059843Using single-cell RNA-Seq for unbiased analysis of developmental hierarchies (single cell RNA Seq of bone marrow lineage-negative CD117+ CD34+ cells)
SRP059844Using single-cell RNA-Seq for unbiased analysis of developmental hierarchies (single cell RNA Seq of bone marrow lineage-negative Sca1+ CD117+ cells)
SRP059845Bcl3 target genes in mESCs
SRP059846Using single-cell RNA-Seq for unbiased analysis of developmental hierarchies (ChIP-seq)
SRP059847Using single-cell RNA-Seq for unbiased analysis of developmental hierarchies (single cell RNA Seq of Gfi1-GFP GMP)
SRP059848Using single-cell RNA-Seq for unbiased analysis of developmental hierarchies (single cell RNA Seq of Gfi1-/- GMP)
SRP059849Integrated metabolomic and transcriptome analyses reveal finishing forage affects metabolic pathways related to beef quality and animal welfare
SRP059850Using single-cell RNA-Seq for unbiased analysis of developmental hierarchies (single cell RNA Seq of GMP)
SRP059853GenomeTrakr Project: SDSU Veterinary & Biomedical Sciences/ DOH South Dakota
SRP059871soil Raw sequence reads
SRP059872The Ski complex binds 80S ribosomes for 3’ to 5’ decay of mRNA
SRP059873Using single-cell RNA-Seq for unbiased analysis of developmental hierarchies (single cell RNA Seq of Irf8 KO GMP)
SRP059874Genome-wide mapping of Zea maize TSSs
SRP059875COSMIC-seq of bioactive N-methylpyrrole/N-methylimidazole polyamides
SRP059877Identification of chemicals that mimic transcriptional changes associated with autism, brain aging and neurodegeneration
SRP059880RNA-seq of cytosolic and chromatin-associated transcripts following TNFa and Spt5 KD
SRP059881Transcriptional repression of IRF7 by MYC is critical for antiviral immune response in human pDC [ChIP-seq]
SRP059882Transcriptome analysis of Gata6-AS depleted XEN cells
SRP059885Partial Hepatectomy Induced Long Noncoding RNA Inhibits Hepatocyte Proliferation during Liver Regeneration
SRP059887Measure transcript integrity using RNA-seq data
SRP059888Defining the Rio1 transcriptome in the yeast Saccharomyces cerevisiae
SRP059889Large scale sequencing of small RNAs in tomato plants
SRP059890Long non-coding RNA produced by RNA polymerase V determines boundaries of heterochromatin
SRP059892B-cell Differentiation is Regulated by Targeted DNA Hypomethylation [RRBS_1]
SRP059893Single-cell chromatin profiles reveal a spectrum of stem cell epigenetic states
SRP059895Genome-wide chromatin localization maps of the endogenously expressed AID-labelled kinase/ATPase Rio1 in Saccharomyces cerevisiae W303, as determined under unperturbed culture conditions (YPD medium, exponential growth, 23°C)
SRP059899A transcriptome atlas of embryonic skin
SRP059900Morphological and Genetic Mechanisms of Regeneration in Hemichordates
SRP059902Using single-cell RNA-Seq for unbiased analysis of developmental hierarchies (Bulk RNA-Seq)
SRP059903Using single-cell RNA-Seq for unbiased analysis of developmental hierarchies (single cell RNA Seq from CMP)
SRP059904Using single-cell RNA-Seq for unbiased analysis of developmental hierarchies (single cell RNA Seq of Irf8-GFP GMP)
SRP059908The evolution of N6-methyladenosine in primates
SRP059909RNA-seq analysis of transcriptome changes upon Erk knockout, or Mek inhibition in WT and Erk KO ESCs.
SRP059910global gene expression profiling experiments of HSC cultured in cysteine or valine deficient medium by RNA-sequencing analysis
SRP059911Protein kinase C is essential for viability of the rice blast fungus Magnaporthe oryzae
SRP059912Comparative analysis of drought-responsive transcriptome in soybean lines contrasting for canopy wilting
SRP059913Atad2 is a generalist facilitator of chromatin dynamics in embryonic stem cells [Atad2_ES_Chipseq1_BI]
SRP059914Atad2 is a generalist facilitator of chromatin dynamics in embryonic stem cells [Atad2_ES_ChIPseq2_MG2]
SRP059915Atad2 is a generalist facilitator of chromatin dynamics in embryonic stem cells [Atad2_ES_RNAseq_BI]
SRP059916Reporter Gene Silencing in Targeted Mouse Mutants is Associated with Promoter CpG Island Methylation
SRP059917Expression of AWR5 in wild type and cdc55 deletion mutant at 6 h of induction
SRP059918Antarctic marine sponge-associated microbial communities Raw sequence reads
SRP059919Transcriptional response to drought stress in chickpea
SRP059924Novel Pathways Revealed in Bursa of Fabricius Transcriptome in Response to Extraintestinal Pathogenic Escherichia coli (ExPEC) Infection
SRP059925ncRNA (non-coding RNA) signature in endothelial cells during hypoxia [RNA-seq]
SRP059933Arginine methylation regulates widespread alternative polyadenylation
SRP059935LncPHx2 RNA-interactome
SRP059936Genome-wide analysis of Estrogen Receptor-mediated response to acute Estradiol treatment in liver (ChIP-seq)
SRP059937Oncogene-dependent regulation of tumor cells via stromal reciprocal signalling
SRP059938RNA-sequencing analysis of liver from mice overexpressing miR-30c
SRP059939Genomic binding and regulation of gene expression by the thyroid carcinoma-associated PAX8-PPARG fusion protein
SRP059940Chromatin dynamics and the role of G9a in gene regulation and enhancer silencing during early mouse development
SRP059941Acinetobacter oleivorans DR1: paraquat-treated and phenazine methosulfate-treated
SRP059942Perturbed neonatal size is associated with differential DNA methylation and gene expression in human placentas
SRP059943Nurr1 and Retinoid X Receptor ligands stimulate Ret signaling in dopamine neurons and can alleviate a-synuclein disrupted gene expression
SRP059944Transcriptomic profiles of M. barkeri Fusaro DSMZ804 and Pyr+ strains
SRP059945Strongylocentrotus purpuratus high resolution developmental transcriptomic time-course
SRP059946RNAseq analysis of Mo17 seedlings
SRP059947Global Analysis of the developmental dynamics of Gossypium hirsutum based on strand-specific transcriptome
SRP059948Transcriptome-wide mapping of cut sites of the viral endoribonuclease SOX from Kaposi''s sarcoma-associated herpesvirus (KSHV)
SRP059949Transcriptome-wide RNA processing kinetics revealed using extremely short 4tU labelling
SRP059950Patient Derived Xenograft for Delivery of Precision Medicine in Castrate Resistant Prostate Cancer
SRP059951Transcriptional response to salinity stress in chickpea
SRP059952Changes in ovarian gene expression profiles in maturing European eel (Anguilla anguilla)
SRP059953Changes in ovarian gene expression profiles in maturing European eel (Anguilla anguilla) (responders and non-responders)
SRP059954LMTK3 Represses Tumour Suppressor-Like Genes through Chromatin Remodeling in Breast Cancer
SRP059955Characterization of pro- and anti-inflammatory activation states in embryonic stem cell derived microglia
SRP059956Identification of promoters and enhancers induced by carbon nanotube exposure
SRP059957Gene expression profiling of human and murine in vitro muscle differentiation
SRP059958Circadian regulation of gene expression in the SCN (RNA-seq)
SRP059959Long non-coding RNAs display higher natural expression variation than protein-coding genes in healthy humans
SRP059961Genome-Wide Gene Expression Perturbation Induced by Loss of C2 Chromosome in Allotetraploid Brassica napus L.
SRP059962SpDamID: Marking DNA Bound by Protein Complexes Identifies Notch-Dimer Responsive Enhancers [next-generation sequencing]
SRP059963Investigation about Monocytes in metastatic breast cancer patients under chemotherapy +/- Avastin
SRP059964A new MCM modification cycle regulates DNA replication initiation
SRP059966Genome-wide ChIP-seq analysis of Nr4a1 binding sites in regulatory T (Treg) cells
SRP059967Evx1as and EVX1 knockouts by CRISPR
SRP059973Cynops pyrrhogaster ageing transcriptome
SRP060001Moringa oleifera Transcriptome or Gene expression
SRP060023Homo sapiens Epigenomics
SRP060195The 1KITE project: evolution of insects
SRP060206Regulation of germline gene expression in C. elegans germline stem cells.
SRP060208Gene expression analysis of diploid and autotetraploids of Mulberry (Morus atropurpurea)
SRP060222De novo assembly and transcriptome characterization of land snail Aegista mackensii (Adams & Reeve, 1850)
SRP060224Exosome-mediated microRNA signaling from breast cancer cells is altered by the anti-angiogenesis agent docosahexaenoic acid (DHA)
SRP060225RNAseq measurments of gene expression during simultanous replication and mitosis using the S. Pombe minimal cell cycle strain
SRP060226Ground state of pluripotency cannot be maintained in mouse embryonic stem cells upon prolonged inhibition of GSK3
SRP060227PAF1, a molecular regulator of promoter-proximal pausing by RNA Polymerase II
SRP060228The acute cold response of brown adipose tissue analyzed by RNA-seq
SRP060232Loss of EZH2 results in precocious mammary gland development and the activation of STAT5-dependent genes
SRP060233Stromal Fat4 acts non-autonomously with Dachsous1/2 to restrict the nephron progenitor pool
SRP060234Identifying DEK-dependent transcriptional signatures in HPV+ and HPV- head and neck squamous cell carcinoma (HNSCC)
SRP060235Replicated transcriptome profiling of Normal and Cancerous Prostate Cells [RNA-Seq]
SRP060236Identification of differentially expressed miRNAs in HCSC cell lines compared with HCC cell lines
SRP060237tRNA-Derived Small Non-Coding RNAs in Response to Ischemia Inhibit Angiogenesis
SRP060238Hearts from AE3-null mice - RNA-Seq
SRP060239Cell type-specific chromatin states differentially prime squamous cell carcinoma tumor-initiating cells for epithelial to mesenchymal transition [ATAC-seq]
SRP060240Dynamic of DNA methylation during Arabidopsis reproduction
SRP060245ChIPmentation: fast, cheap, low-input ChIP-seq for histones and transcription factors
SRP060246m1A marks translation initiation sites in human and mouse messenger RNA [Sequencing]
SRP060247Viral nucleases reveal an mRNA degradation-transcription feedback loop in mammalian cells
SRP060265Genome-wide characterization of maize small RNA loci and their regulation in the required to maintain repression6-1 (rmr6-1) mutant and long-term abiotic stresses
SRP060288Lithobates catesbeianus isolate:Bruno Genome sequencing and assembly
SRP060291Transcriptomic differences between day and night in Acropora millepora provide new insights into metabolite exchange and light-enhanced calcification in corals
SRP060292The LSM1-7 Complex Differentially Regulates Arabidopsis Tolerance to Abiotic Stress Conditions by Promoting Selective mRNA Decapping
SRP060293Noncanonical Genomic Imprinting Effects In Offspring
SRP060294p53 coordinates Wnt and TGF-ß inputs on mesendoderm differentiation genes
SRP060295Effect of Bmal1 post-natal knockout on liver gene expression: time-series
SRP060296Effect of Bmal1 pre-natal knockout on liver gene expression: time-series
SRP060312Lithobates catesbeianus Transcriptome or Gene expression
SRP060329Transcriptome analysis using RNA-Seq reveals complex acid responsive mechanisms in 3-hydroxypropionic aicd producing strains of E. coli
SRP060330Identification and Comparative Analysis of Cotton miRNA Target Genes using Degradome Sequencing
SRP060348Latency expression of the Epstein-Barr virus-encoded MHC class I TAP inhibitor, BNLF2a in EBV-positive gastric carcinomas
SRP060349Alterations to chromatin in intestinal macrophages link IL-10 deficiency to inappropriate inflammatory responses
SRP060352Neurospora MUS-30 is an LSH/DDM1 homolog required for normal genome maintenance
SRP060353DNA Cytosine Hydroxymethylation Levels Are Distinct Among Peripheral Blood Leukocytes
SRP060354Dysregulated TLR7 signaling drives anemia via development of hemophagocytic macrophages
SRP060355Transcriptomic variation of pharmacogenes in multiple human tissues and lymphoblastoid cell lines
SRP060356Next generation sequencing facilitates quantitative analysis of control of Candida albicans ATCC 10231 and garlic oil-treated C. albicans ATCC 10231 transcriptomes
SRP060359Identification of differentially expressed mRNAs in HCSC cell lines compared with HCC cell lines
SRP060360Genome-wide Identification of CCA1 Targets Uncovers an Expanded Clock Network in Arabidopsis
SRP060364Tissue specific demethylation is required for proper B-cell differentiation and function
SRP060365Whole genome transcritptional comparison of Group A Streptococcus (Streptococcus pyogenes) serotype M1 pre-epidemic and epidemic isolates
SRP060366Effects on the transcriptome of adult mouse pancreas (principally acinar cells) by the inactivation of the Ptf1a gene in vivo
SRP060370Transcriptional Signatures of Hypoxic and Inflammatory Renal Epithelial Injury
SRP060371Foxd3 promotes the exit from naïve pluripotency and prevents germline specification through enhancer decommissioning [ChIP-Seq]
SRP060372Foxd3 promotes the exit from naïve pluripotency and prevents germline specification through enhancer decommissioning [RNA-Seq]
SRP060373RNA-Seq matched to ribosome profiling over a zebrafish developmental timecourse
SRP060390Transcriptomic Analysis of Differentially Expressed Genes during Larval Development of Rapana Venosa by Digital Gene Expression Profiling
SRP060391Gene expression changes by exogenous expression of epithelial-to-mesenchymal (EMT)-inducing transcription factors (Snail and Zeb1) and mesenchymal-to-epithelial transition (MET)-inducing transcription factor (Ovol2) in MCF10A cells
SRP060392The GATA transcription factor gene gtaG is required for terminal differentiation in Dictyostelium.
SRP060393Ago-APP: a GW peptide-based Argonaute affinity capture strategy
SRP060395Trachinotus ovatus Transcriptome or Gene expression
SRP060410Photomorphogenesis of Arabidopsis seedlings is accompanied by complex alternative splicing alterations
SRP060411anaerobic sludge Raw sequence reads
SRP060412Fermentation of sewage sludge Raw sequence reads
SRP060414BMP signaling in mouse embryonic stem cells (ESCs) in the naïve and primed pluripotent states [RNA-Seq]
SRP060415BMP signaling in mouse embryonic stem cells (ESCs) in the naïve and primed pluripotent states [ChIP-Seq]
SRP060416Single cell RNA-sequencing of human tonsil Innate lymphoid cells (ILCs)
SRP060429RNA-seq analysis of glyoxylate cycle-dependent genes
SRP060432MYB36 regulates the transition from proliferation to differentiation in the Arabidopsis root
SRP060438ADAR2 affects mRNA coding sequence edits but not gene expression or splicing in vivo
SRP060443Genome-wide maps of KDM5 binding in drosophila adults
SRP060444RNA-seq analyses of kdm5 mutant flies and wt flies under normal condition and oxidative stress
SRP060453An IL-23R/IL-22 circuit regulates epithelial serum amyloid A to promote local effector Th17 responses [RNA-Seq]
SRP060455An IL-23R/IL-22 circuit regulates epithelial serum amyloid A to promote local effector Th17 responses [RIP-Seq]
SRP060461Reversible Burst of Transcriptional Changes During Induction of Crassulacean Acid Metabolism (CAM) in Talinum triangulare
SRP060462Identifying lincRNA as prognostic biomarker for clear cell renal cell carcinoma
SRP060472Checking the origin utilisation of Haloferax mediterranei H13 through high-throughput DNA sequencing
SRP060477Next Generation Sequencing Facilitates Quantitative Analysis of Wild Type and ZmMADS47 RNAi mutant Transcriptomes
SRP060478Single Cell Sequencing Identifies Key Epigenetic Regulators in Nuclear Transfer Mediated Reprogramming [RNA-seq]
SRP060479Single Cell Sequencing Identifies Key Epigenetic Regulators in Nuclear Transfer Mediated Reprogramming [ChIP-seq]
SRP060480Single Cell Sequencing Identifies Key Epigenetic Regulators in Nuclear Transfer Mediated Reprogramming [RRBS]
SRP060481miRNA alterations are an important mechanism in the adaptation of maize to a low-phosphate environment
SRP060499Regulatory T cell modulation by CBP/EP300 bromodomain inhibition [RNA-seq]
SRP060500Analysis of paired primary and metastatic cell lines identifies common DNA methylation changes in melanoma metastasis.
SRP060505Transcriptome-wide profiling of Spadetail-regulated genes in early somite progenitors
SRP060509Role of the histone demethylase KDM2B in hematopoietic homeostasis and malignancies [ChIP-seq]
SRP060510An Interaction between RRP6 and SU(VAR)3-9 Targets RRP6 to Heterochromatin and Contributes to Heterochromatin Maintenance in Drosophila melanogaster [RNA-seq]
SRP060515GAGA factor, a positive regulator of global gene expression, modulates transcriptional pausing and organization of upstream nucleosomes. [MNase-seq]
SRP060516Canis lupus familiaris Variation
SRP060522GAGA factor, a positive regulator of global gene expression, modulates transcriptional pausing and organization of upstream nucleosomes.[ChIP-seq]
SRP060523Single-CpG resolution mapping of 5-hydroxymethylcytosine by chemical labeling and exonuclease digestion (SCL-exo)
SRP060542The microbiome of the diabetic foot ulcer predicts clinical outcomes
SRP060557Single cell global gene profiling reveals molecular and functional platelet bias of aged hematopoietic stem cells
SRP060558Dynamic control of enhancer repertoires drives lineage and developmental stage-specific transcription during human erythropoiesis
SRP060559Taf4 is required for preinitiation complex formation at genes associated with neuronal differentiation
SRP060565Integrated Profiling of mRNAs and microRNAs to Identify Potential Biomarkers for Oral Malignant Transformation [miRNA-Seq]
SRP060566Integrated Profiling of mRNAs and microRNAs to Identify Potential Biomarkers for Oral Malignant Transformation [mRNA-Seq]
SRP060567Mechano-sensitive Gene Expression with RNA-Seq: Revisiting the Osteocytic Cell Response to Fluid Flow
SRP060598Mitotic stress is an integral part of the oncogene-induced senescence program that promotes multinucleation and cell cycle arrest
SRP060602Prostate Cancer Risk SNPs in Androgen Receptor Target Sites
SRP060605Musashi-2 attenuates AHR signalling to expand human haematopoietic stem cells
SRP060606ChIP-seq of circadian transcription factors in MLL-AF9 leukemia cell lines
SRP060608Expression data from longissimus dorsi muscle of Shaziling pig at 25-days old and longissimus dorsi musle of Yorkshire pig at 25-days old
SRP060616Cytokine-mediated differentiation reflects genome-wide loss of a uSTAT transcriptional program
SRP060618Genome-wide sequencing of REST binding (ChIP-seq) in adult hippocampal neural stem cells in vitro a.k.a. HCN cells in quiescent (iQNP) and proliferative (TAP) conditions
SRP060619RNA-seq analysis of Myt3 suppression and over-expression in mouse pancreatic islets
SRP060621Genome wide transcriptome analysis (RNA-seq) of adult hippocampal neural stem cells in vitro a.k.a. HCN cells in quiescent and proliferative conditions in non-electroporated or electroporated with control empty vector or REST knock-down shRNA vector
SRP060625Regulatory T cell modulation by CBP/EP300 bromodomain inhibition [ChIP-seq]
SRP060627Regulation of bifurcating B cell trajectories by mutual antagonism between IRF4 and IRF8 (ChIP-Seq)
SRP060628Regulation of bifurcating B cell trajectories by mutual antagonism between IRF4 and IRF8 (RNA-Seq)
SRP060630Genome wide localization of nuclosomes in mouse
SRP060633Single-cell analysis reveals lineage segregation and pluripotency state transition in early post-implantation mouse embryos
SRP060636Analysis of MOF under stress conditions
SRP060637Cas9 gRNA engineering for selectable genome editing, activation and repression
SRP060638Differential gene expression profiling and functional network analysis of Mycobacterium tuberculosis bioflims and planktonic populations
SRP060639RNA sequencing of Taf4+/+ and Taf4-/- cells in 1 timepoint during the differentiation into the cardiac lineage
SRP060640Genome-wide mapping of Hif-1a binding sites in zebrafish [ChIP-seq]
SRP060643De novo DNA methyltransferases DNMT3A and DNMT3B are essential of global DNA methylation maintenance [BS-Seq]
SRP060644De novo DNA methyltransferases DNMT3A and DNMT3B are essential of global DNA methylation maintenance [RNA-Seq]
SRP060645RNA sequencing of Taf4+/+ and Taf4-/- cells in their pluripotent state as well as 3 timepoints during the formation of neurons
SRP060646De novo DNA methyltransferases DNMT3A and DNMT3B are essential of global DNA methylation maintenance [TAB-Seq]
SRP060647Role of the histone demethylase KDM2B in hematopoietic homeostasis and malignancies [RNA-seq]
SRP060648A comprehensive examination of dynamic gene expression changes in the mouse brain during pregnancy and the postpartum period
SRP060649H3K27ac ChIP-Seq in ALL-SIL
SRP060650Enhancer divergence and cis-regulatory evolution in the human and chimpanzee neural crest
SRP060651Differentiation of human embryonic stem cells towards hepatocytes
SRP060652Multiple hierarchies of Polycomb targeting to Drosophila genome (Part2)
SRP060653Broiler responses to virulent and avirulent Clostridium perfringens
SRP060656NCoR/SMRT co-repressors cooperate with c-MYC to create an epigenetic barrier to somatic cell reprogramming [ChIP-Seq]
SRP060657NCoR/SMRT co-repressors cooperate with c-MYC to create an epigenetic barrier to somatic cell reprogramming [RNA-seq]
SRP060658Genome-wide maps of chromatin state in drug sensitive and resistance Lewis lung carcinoma isograft mouse model
SRP060659Integrative epigenomic analysis in MLL-AF9 acute myeloid leukemia (AML) and B-acute lymphoblastic leukemia (B-ALL)
SRP060660MIWI2 and MILI have differential effects on piRNA biogenesis and DNA methylation
SRP060661Comparative analyses of CTCF and BORIS occupancies uncover two distinct classes of CTCF binding genomic regions
SRP060662Chordoma ATAC-Seq
SRP060665Aubergine iCLIP reveals direct regulation of mRNAs involved in germ cell development by piRNAs in the early embryo
SRP060666Distinct processes and transcriptional targets underlie CDX2 requirements in intestinal stem cells and differentiated villus cells
SRP060667RNA sequencing of Control, ?Cop1ß, ?Cop1ß and ?Cop1ß ?ETV1/4/5ß islets
SRP060668Differentially Expressed Pseudogenes in HIV-1 Infection
SRP060669Transcriptional and translational analysis of wild-type and Mincle-KO macrophages
SRP060670Expression profiling of wheat heads from spring wheat Chinese Spring (CS) and CS-7EL (CS with additional chromosome arm 7EL from Thinopyrum elongatum), after inoculation with either water (mock inoculation) or Fusarium graminearum
SRP060671Impact of Jmjd3 and Utx histone demethylases on Histone H3 lysine 27 trimethylation (H3K27Me3) in mature CD4 SP thymocytes
SRP060674Molecular signatures of neural connectivity in the olfactory cortex
SRP060675Profile of RNAs bound by wild-type (WT) or R534H variant of DDX3 with or without Sodium Arsenite treatment [iCLIP-Seq]
SRP060676Profiles of ribosome-associated mRNAs regulated by expression of wild-type (WT) or R534H variant of DDX3 with or without Sodium Arsenite treatment [Ribo-Seq]
SRP060677Total RNA profiles associated with DDX3 wild-type (WT) or R534H variant expression with or without sodium arsenite treatment [RNA-seq]
SRP060679Molecular Response of Chorioretinal Endothelial Cells to Complement Injury: Implications for Macular Degeneration
SRP060702A network-based strategy for prioritizing hits from chemical screening data by leveraging genetic, epigenetic and transcriptional datasets
SRP060703The DAXX/ATRX Complex Protects Tandem Repetitive Elements in the Absence of DNA Methylation by Promoting H3K9 Trimethylation [ChIP-Seq]
SRP060704Epigenome Editing by CRISPR/Cas9 Repressors for Silencing of Distal Regulatory Elements
SRP060705Hobit and Blimp1 instruct a universal transcriptional program of tissue-residency in lymphocytes
SRP060706Regulation of gene expression after FGF2-induced gyrification of mouse brain
SRP060707TET2 Regulates Mast Cell Differentiation and Proliferation through Catalytic and Non-catalytic Activities.
SRP060708Deregulation of HIF-Responsive Demethylases Causes Synthetic Lethality Between the VHL Tumor Suppressor Gene and the EZH1 Histone Methyltransferase
SRP060709Reprogramming roadblocks are system-dependent
SRP060710Spatially distinct neutrophil responses within the inflammatory lesions of pneumonic plague
SRP060714Mapping open chromatin dynamics of cortical neuron differentiation from human induced pluripotent stem cells (iPSCs) by ATAC-Seq
SRP060715Gene expression and splicing alterations analyzed by high throughput RNA sequencing of chronic lymphocytic leukemia specimens
SRP060716Tetranychus cinnabarinus strain:SS Transcriptome or Gene expression
SRP060719MiR-26 dampens IL-6 production by down-regulating TNF-a/NF-kB signaling through silencing HMGA1 and MALT1 and not by directly targeting IL-6 mRNA
SRP060720Method for accurate epigenome profiling using a few hundred cells and its applications
SRP060721HCT116 MYC 3'' TBE1 (WT) and KO RNA-Seq
SRP060722Antibiotic-responsive microbial transcriptomes
SRP060723Antibiotic-responsive microbial transcriptomes
SRP060724Antibiotic-responsive microbial transcriptomes
SRP060725Antibiotic-responsive microbial transcriptomes
SRP060726Antibiotic-responsive microbial transcriptomes
SRP060728Antibiotic-responsive microbial transcriptomes
SRP060729Antibiotic-responsive microbial transcriptomes
SRP060730Antibiotic-responsive microbial transcriptomes
SRP060731Antibiotic-responsive microbial transcriptomes
SRP060732Antibiotic-responsive microbial transcriptomes
SRP060740Transcriptomic profiling of S. cerevisiae wild type and aft2 mutant in response to exposure to selenite
SRP060742Antibiotic-responsive microbial transcriptomes
SRP060743Antibiotic-responsive microbial transcriptomes
SRP060744Single-cell RNA sequencing of aspirates from cortical neurons after patch clamp recording
SRP060745Tribbles-1 regulates hepatic lipogenesis through post-transcriptional regulation of C/EBPa [ChIP-Seq]
SRP060746Antibiotic-responsive microbial transcriptomes
SRP060747Antibiotic-responsive microbial transcriptomes
SRP060748Antibiotic-responsive microbial transcriptomes
SRP060749Antibiotic-responsive microbial transcriptomes
SRP060750Antibiotic-responsive microbial transcriptomes
SRP060751Antibiotic-responsive microbial transcriptomes
SRP060753Genome-wide epigenetic cross-talk between DNA methylation and H3K27me3 in zebrafish embryos
SRP060754HIV-1 RNAs are not part of the Argonaute 2 associated RNA interference pathway in macrophages
SRP060756Antibiotic-responsive microbial transcriptomes
SRP060757Antibiotic-responsive microbial transcriptomes
SRP060758Antibiotic-responsive microbial transcriptomes
SRP060761Antibiotic-responsive microbial transcriptomes
SRP060762Antibiotic-responsive microbial transcriptomes
SRP060763Antibiotic-responsive microbial transcriptomes
SRP060768Antibiotic-responsive microbial transcriptomes
SRP060769Antibiotic-responsive microbial transcriptomes
SRP060772Antibiotic-responsive microbial transcriptomes
SRP060773Antibiotic-responsive microbial transcriptomes
SRP060774Antibiotic-responsive microbial transcriptomes
SRP060775Antibiotic-responsive microbial transcriptomes
SRP060776Antibiotic-responsive microbial transcriptomes
SRP060777Antibiotic-responsive microbial transcriptomes
SRP060778Antibiotic-responsive microbial transcriptomes
SRP060779Antibiotic-responsive microbial transcriptomes
SRP060780Antibiotic-responsive microbial transcriptomes
SRP060781Antibiotic-responsive microbial transcriptomes
SRP060782Antibiotic-responsive microbial transcriptomes
SRP060783Antibiotic-responsive microbial transcriptomes
SRP060787Antibiotic-responsive microbial transcriptomes
SRP060788Antibiotic-responsive microbial transcriptomes
SRP060791Changes of axonal transcriptomes in response to local Abeta
SRP060792Antibiotic-responsive microbial transcriptomes
SRP060793Antibiotic-responsive microbial transcriptomes
SRP060794Antibiotic-responsive microbial transcriptomes
SRP060795Antibiotic-responsive microbial transcriptomes
SRP060796Antibiotic-responsive microbial transcriptomes
SRP060797Antibiotic-responsive microbial transcriptomes
SRP060798Antibiotic-responsive microbial transcriptomes
SRP060799Antibiotic-responsive microbial transcriptomes
SRP060800Antibiotic-responsive microbial transcriptomes
SRP060801Antibiotic-responsive microbial transcriptomes
SRP060802Antibiotic-responsive microbial transcriptomes
SRP060803Antibiotic-responsive microbial transcriptomes
SRP060805Antibiotic-responsive microbial transcriptomes
SRP060806Antibiotic-responsive microbial transcriptomes
SRP060807Antibiotic-responsive microbial transcriptomes
SRP060808Antibiotic-responsive microbial transcriptomes
SRP060809Antibiotic-responsive microbial transcriptomes
SRP060810Antibiotic-responsive microbial transcriptomes
SRP060813Antibiotic-responsive microbial transcriptomes
SRP060814Antibiotic-responsive microbial transcriptomes
SRP060815Antibiotic-responsive microbial transcriptomes
SRP060816Antibiotic-responsive microbial transcriptomes
SRP060818Antibiotic-responsive microbial transcriptomes
SRP060822Antibiotic-responsive microbial transcriptomes
SRP060825Antibiotic-responsive microbial transcriptomes
SRP060826Antibiotic-responsive microbial transcriptomes
SRP060827Antibiotic-responsive microbial transcriptomes
SRP060828Antibiotic-responsive microbial transcriptomes
SRP060829Antibiotic-responsive microbial transcriptomes
SRP060830Antibiotic-responsive microbial transcriptomes
SRP060831Antibiotic-responsive microbial transcriptomes
SRP060832Antibiotic-responsive microbial transcriptomes
SRP060833Antibiotic-responsive microbial transcriptomes
SRP060834Antibiotic-responsive microbial transcriptomes
SRP060835Antibiotic-responsive microbial transcriptomes
SRP060837Antibiotic-responsive microbial transcriptomes
SRP060844Antibiotic-responsive microbial transcriptomes
SRP060846Antibiotic-responsive microbial transcriptomes
SRP060849Antibiotic-responsive microbial transcriptomes
SRP060851Antibiotic-responsive microbial transcriptomes
SRP060852Antibiotic-responsive microbial transcriptomes
SRP060853Antibiotic-responsive microbial transcriptomes
SRP060854Antibiotic-responsive microbial transcriptomes
SRP060855Antibiotic-responsive microbial transcriptomes
SRP060856Antibiotic-responsive microbial transcriptomes
SRP060857Antibiotic-responsive microbial transcriptomes
SRP060858Antibiotic-responsive microbial transcriptomes
SRP060859Antibiotic-responsive microbial transcriptomes
SRP060860Antibiotic-responsive microbial transcriptomes
SRP060861Antibiotic-responsive microbial transcriptomes
SRP060862Antibiotic-responsive microbial transcriptomes
SRP060863Antibiotic-responsive microbial transcriptomes
SRP060864Antibiotic-responsive microbial transcriptomes
SRP060865Antibiotic-responsive microbial transcriptomes
SRP060866Antibiotic-responsive microbial transcriptomes
SRP060867Antibiotic-responsive microbial transcriptomes
SRP060868Antibiotic-responsive microbial transcriptomes
SRP060869Antibiotic-responsive microbial transcriptomes
SRP060870Antibiotic-responsive microbial transcriptomes
SRP060871Antibiotic-responsive microbial transcriptomes
SRP060872Antibiotic-responsive microbial transcriptomes
SRP060873Antibiotic-responsive microbial transcriptomes
SRP060874Antibiotic-responsive microbial transcriptomes
SRP060875Antibiotic-responsive microbial transcriptomes
SRP060877Systematic Identification of Factors Crucial for Provirus Silencing in Embryonic Stem Cells (ChIP-seq)
SRP060878Systematic Identification of Factors Crucial for Provirus Silencing in Embryonic Stem Cells (RNA-seq)
SRP060879Antibiotic-responsive microbial transcriptomes
SRP060880Antibiotic-responsive microbial transcriptomes
SRP060882Antibiotic-responsive microbial transcriptomes
SRP060883Single cell transcriptomic analysis of thymic epithelial cells
SRP060884Antibiotic-responsive microbial transcriptomes
SRP060887Antibiotic-responsive microbial transcriptomes
SRP060889Antibiotic-responsive microbial transcriptomes
SRP060891Antibiotic-responsive microbial transcriptomes
SRP060892Antibiotic-responsive microbial transcriptomes
SRP060893Antibiotic-responsive microbial transcriptomes
SRP060894Antibiotic-responsive microbial transcriptomes
SRP060895Antibiotic-responsive microbial transcriptomes
SRP060897Antibiotic-responsive microbial transcriptomes
SRP060898Antibiotic-responsive microbial transcriptomes
SRP060899Antibiotic-responsive microbial transcriptomes
SRP060901Antibiotic-responsive microbial transcriptomes
SRP060902Antibiotic-responsive microbial transcriptomes
SRP060903Antibiotic-responsive microbial transcriptomes
SRP060904Antibiotic-responsive microbial transcriptomes
SRP060905Antibiotic-responsive microbial transcriptomes
SRP060906Antibiotic-responsive microbial transcriptomes
SRP060907Antibiotic-responsive microbial transcriptomes
SRP060908Antibiotic-responsive microbial transcriptomes
SRP060909Antibiotic-responsive microbial transcriptomes
SRP060910Antibiotic-responsive microbial transcriptomes
SRP060911Antibiotic-responsive microbial transcriptomes
SRP060912Antibiotic-responsive microbial transcriptomes
SRP060913Antibiotic-responsive microbial transcriptomes
SRP060914Antibiotic-responsive microbial transcriptomes
SRP060915Antibiotic-responsive microbial transcriptomes
SRP060916Antibiotic-responsive microbial transcriptomes
SRP060917Antibiotic-responsive microbial transcriptomes
SRP060918Antibiotic-responsive microbial transcriptomes
SRP060919Antibiotic-responsive microbial transcriptomes
SRP060920Antibiotic-responsive microbial transcriptomes
SRP060921Antibiotic-responsive microbial transcriptomes
SRP060923Antibiotic-responsive microbial transcriptomes
SRP060924Antibiotic-responsive microbial transcriptomes
SRP060925Antibiotic-responsive microbial transcriptomes
SRP060927Antibiotic-responsive microbial transcriptomes
SRP060929Antibiotic-responsive microbial transcriptomes
SRP060930Antibiotic-responsive microbial transcriptomes
SRP060931Antibiotic-responsive microbial transcriptomes
SRP060932Antibiotic-responsive microbial transcriptomes
SRP060934Antibiotic-responsive microbial transcriptomes
SRP060937Antibiotic-responsive microbial transcriptomes
SRP060939Antibiotic-responsive microbial transcriptomes
SRP060940Antibiotic-responsive microbial transcriptomes
SRP060942Antibiotic-responsive microbial transcriptomes
SRP060943Antibiotic-responsive microbial transcriptomes
SRP060944Antibiotic-responsive microbial transcriptomes
SRP060945Antibiotic-responsive microbial transcriptomes
SRP060946Antibiotic-responsive microbial transcriptomes
SRP060947Antibiotic-responsive microbial transcriptomes
SRP060948Antibiotic-responsive microbial transcriptomes
SRP060950Antibiotic-responsive microbial transcriptomes
SRP060952Antibiotic-responsive microbial transcriptomes
SRP060953Antibiotic-responsive microbial transcriptomes
SRP060954Antibiotic-responsive microbial transcriptomes
SRP060956Antibiotic-responsive microbial transcriptomes
SRP060957Antibiotic-responsive microbial transcriptomes
SRP060958Antibiotic-responsive microbial transcriptomes
SRP060959Antibiotic-responsive microbial transcriptomes
SRP060960Antibiotic-responsive microbial transcriptomes
SRP060961Antibiotic-responsive microbial transcriptomes
SRP060962Antibiotic-responsive microbial transcriptomes
SRP060963Antibiotic-responsive microbial transcriptomes
SRP060964Antibiotic-responsive microbial transcriptomes
SRP060965Antibiotic-responsive microbial transcriptomes
SRP060966Sequences of cultured P. falciparum malaria isolates from French Guiana
SRP060967Antibiotic-responsive microbial transcriptomes
SRP060968Antibiotic-responsive microbial transcriptomes
SRP060969Antibiotic-responsive microbial transcriptomes
SRP060970Antibiotic-responsive microbial transcriptomes
SRP060971Antibiotic-responsive microbial transcriptomes
SRP060972Antibiotic-responsive microbial transcriptomes
SRP060973Antibiotic-responsive microbial transcriptomes
SRP060978Antibiotic-responsive microbial transcriptomes
SRP060979Antibiotic-responsive microbial transcriptomes
SRP060980Antibiotic-responsive microbial transcriptomes
SRP060981Antibiotic-responsive microbial transcriptomes
SRP060982Antibiotic-responsive microbial transcriptomes
SRP060983Antibiotic-responsive microbial transcriptomes
SRP060984Antibiotic-responsive microbial transcriptomes
SRP060985Antibiotic-responsive microbial transcriptomes
SRP060986Antibiotic-responsive microbial transcriptomes
SRP060987Antibiotic-responsive microbial transcriptomes
SRP060988Antibiotic-responsive microbial transcriptomes
SRP060989Antibiotic-responsive microbial transcriptomes
SRP060990Antibiotic-responsive microbial transcriptomes
SRP060991Antibiotic-responsive microbial transcriptomes
SRP060992Antibiotic-responsive microbial transcriptomes
SRP060993Antibiotic-responsive microbial transcriptomes
SRP060994Antibiotic-responsive microbial transcriptomes
SRP060995Antibiotic-responsive microbial transcriptomes
SRP060996Antibiotic-responsive microbial transcriptomes
SRP060997Antibiotic-responsive microbial transcriptomes