AccessionTitle or Alias
SRP070157Mouse embryonic lung FOXF1 ChIP-seq analysis
SRP070164Genome-wide maps of ISL1-binding site
SRP070165Next Generation Sequencing Facilitates Quantitative Analysis of ISL1 Regulated Transcriptomes
SRP070168Comparison of whole-genome bisulfite sequencing library preparation strategies identifies sources of biases affecting DNA methylation data
SRP070173Equus caballus breed:mixed Transcriptome or Gene expression
SRP070187MTHFD1 controls DNA methylation in Arabidopsis
SRP070188A highly sensitive and robust method for genome-wide 5hmC profiling of rare cell populations
SRP070192Comparison of the transcriptomes of a Burkholeria pseudomallei bprR [bpss0688] mutant, a bprS [bpss0687] mutant and a bprRS double mutant with the wild-type B. pseudomallei K96243 parent strain.
SRP070197Aphytis melinus Raw sequence reads
SRP070204TRX-1 Regulates SKN-1 Nuclear Localization Cell Non-Autonomously in Caenorhabditis elegans
SRP070419marine sediment metagenome Genome sequencing and assembly
SRP070425Use of the Fluidigm C1 platform for RNA sequencing of single mouse pancreatic islet cells
SRP070427Transcriptomic basis for reinforcement of elm anti-herbivore defense mediated by insect egg deposition
SRP070428BET Bromodomain inhibition promotes neurogenesis while inhibiting gliogenesis in neural progenitor cells
SRP070429Re-evaluation of the roles of DROSHA, Exportin 5, and DICER in microRNA biogenesis
SRP070430Next Generation Sequencing Facilitates Quantitative Analysis of HCC cells transfected with NCsiRNA or CDCA8siRNA
SRP070431Evidence for a role of viruses in the thermal sensitivity of coral photosymbionts
SRP070432A commonly inactivated tumor suppressor silences endogenous retroelements in somatic cells [ChIP-Seq]
SRP070433Quantitative Analysis of Notch mutant (Notch1&2-null, Psen1&2-null, RBPjk-null) and wild-type hair follicle transcriptomes by NGS
SRP070434Genome-wide distribution of H2AS40Gc in mouse embryonic stem cells.
SRP070435Cis-regulatory architecture of a brain-signaling center predates the origin of chordates
SRP070436Mechanisms of variable ventilation in experimental lung injury
SRP070437Multivalent binding of PWWP2A to H2A.Z-marked transcriptional active chromatin regulates mitosis and organ development [ChIP-seq]
SRP070439Multivalent binding of PWWP2A to H2A.Z-marked transcriptional active chromatin regulates mitosis and organ development [RNA-seq]
SRP070440Tissue specific transcriptional profiling of the consequences of 16p11.2 deletion and duplication in Mouse
SRP070442RNA-Seq Analysis of Anacardic Acid Treated MCF7 and MDA-MB-231 Breast Cancer Cell Lines
SRP070444Genome-wide analysis of DNA methylation Metarhizium robertsii
SRP070447Acute exposure to graded levels of hypoxia in U87-MG cells: the role of hypoxia in GBM
SRP070451m6A RNA methylation promotes XIST-mediated transcriptional repression
SRP070452Regulation of gene expression during the onset of ligninolytic oxidation by Wolfiporia cocos on colonized wood
SRP070453microRNA profiling of Sprague Dawley organs
SRP070459Analysis of embryonic development in the unsequenced axolotl: waves of transcriptional upheaval and stability
SRP070460Cell freezing protocol suitable for ATAC-Seq on motor neurons derived from human induced pluripotent stem cells
SRP070461The absence of quorum sensing signals triggers the expression of the symbiotic genes in broad host range rhizobia
SRP070463Reversible methylation of m6Am in the 5' cap controls mRNA stability
SRP070465Differential RNA-Seq (dRNA-seq) of Escherichia coli O104:H4
SRP070466Gene expression across 3 days of lens-induced myopia and hyperopia induction in chick
SRP070468p53 is a critical regulator of airway epithelial progenitor cell homeostasis.
SRP070469RNA-seq analysis of transcriptomes for developing fruits derived from sweet orange varieties
SRP070486MNase-seq of Tetrahymena thermophial macronucleus (MAC) and micronucleus (MIC)
SRP070487Grasses suppress shoot-borne roots to conserve water during drought
SRP070499Odd skipped-related 1 (Osr1) identifies a population of embryonic fibro-adipogenic progenitors regulating myogenesis during limb development
SRP070502RNA-Seq Analysis of VRF1-dependent Genes in the appressoria of Magnaporthe oryzae 70-15
SRP070514Pseudouridylation in Naf1+/- mice
SRP070517A Scalable Epitope Tagging Approach for High Throughput ChIP-seq Analysis
SRP070519TRIBE : Hijacking an RNA-editing enzyme to identify cell-specific targets of RNA-binding proteins
SRP070520Improvements to the HITS-CLIP protocol eliminate widespread mispriming artifacts.
SRP070527Pathogenicity of genomic duplications is determined by formation of novel chromatin domains (neo-TADs) (4C-seq)
SRP070528Oct4 ChIP-Seq at G1 and G2/M phase of cell cycle in mouse embryonic stem cells
SRP070530Nuclease footprints in sperm project past and future chromatin regulatory events
SRP070532miR-126 Orchestrates an Oncogenic Program in B-Cell Precursor Acute Lymphoblastic Leukemia
SRP070537Raw sequence data for gut bacteria and fungi in piglets gut Metagenome
SRP070548Immunological Imbalance in Fibrodysplasia Ossificans Progressiva Revealed by PBMC Transcriptome Analysis
SRP070551Opposite functions of microglial and macrophagial TNFR2 in EAE pathogenesis: the good versus the bad.
SRP070552The RNA-binding protein Hdlbp/Vigilin is increased in hepatic steatosis and regulates VLDL secretion through modulation of Apob mRNA translation
SRP070553Arabidopsis AGO3 predominantly recruits 24-nucleotide small RNAs to regulate epigenetic silencing [Bisulfite-seq]
SRP070554Arabidopsis AGO3 predominantly recruits 24-nucleotide small RNAs to regulate epigenetic silencing [miRNA-seq]
SRP070555Homo sapiens Raw sequence reads
SRP070556Genome-wide maps of chromatin state during cardiac reprogramming of human fibroblasts by small molecules
SRP070559Capture-C reveals preformed chromatin interactions between HIF-binding sites and distant promoters
SRP070560Effect of drought on herbivore-induced plant gene expression: Population comparison for range limit inferences
SRP070561ChIP-exo of human KRAB-ZNFs transduced in HEK 293T cells and KAP1 in hES H1 cells
SRP070564RNA-seq of HL60 cells treated with epigenetic therapy
SRP070565Pathogenicity of genomic duplications is determined by formation of novel chromatin domains (neo-TADs) [Hi-C]
SRP070566Trancriptome study of zebrafish mutant fn10a
SRP070567Digital Restriction Enzyme Analysis of Methylation (DREAM) of HL60 genomic DNA
SRP070569CELF RNA binding proteins promote axon regeneration in C. elegans and mouse through regulation of syntaxin
SRP070571Pathogenicity of genomic duplications is determined by formation of novel chromatin domains (neo-TADs) (RNA-seq)
SRP070572Capture-C reveals preformed chromatin interactions between HIF-binding sites and distant promoters. [ChIP-Seq]
SRP070573A novel hydrogel-based instructive biohybrid 3D culture system for modeling human neural stem cell plasticity, neurogenesis, neurodevelopment, and neurodegeneration
SRP070574RNA-seq analysis of transcriptomes in cae2-1, CA1-1 and cae2-1 CA1-1 Arabidopsis genotypes
SRP070576Triticum aestivum Variation
SRP070580Porphyromonas gingivalis transcriptome in presence or absence of pABA
SRP070581Epigenetic Profiles Signify Cell Fate Plasticity in Unipotent Spermatogonial Stem and Progenitor Cells (RNA-Seq)
SRP070582RNA-sequencing of non-senescent and senescent mouse skin fibroblast
SRP070583Deep sequencing of mRNA from Mus musculus at two different timepoints in skin (ear clip)
SRP070584Systematic characterization of seminal plasma piRNAs as molecular biomarkers for male infertility
SRP070585Epigenetic Profiles Signify Cell Fate Plasticity in Unipotent Spermatogonial Stem and Progenitor Cells (ChIP-Seq)
SRP070590Identification of copper (Cu) stress-responsive grapevine microRNAs and their target genes by high-throughput sequencing
SRP070611Telomeric retrotransposon HeT-A contains a bidirectional promoter that initiates divergent transcription of piRNA precursors in Drosophila germline
SRP070621Cytosolic splice isoform of Hsp70 nucleotide exchange factor Fes1 is required for the degradation of misfolded proteins in yeast
SRP070636MLL1 is essential for the senescence-associated secretory phenotype [RNA-Seq]
SRP070637Single-cell multi-omics sequencing of mouse early embryos and embryonic stem cells
SRP070638RNA sequencing for tumor-initiating stem-like cells (TICs) treated with all-trans retinoic acid (ATRA) and suberoylanilide hydroxamic acid (SAHA)
SRP070639MLL1 is essential for the senescence-associated secretory phenotype [ChIP-Seq]
SRP070641RNA-Seq of subcutaneous inguinal white fat of Hlx transgenic mice and littermate controls.
SRP070642Methylation and gene expression profiling in Dnmt3a-deficient chronic lymphocytic leukemia and peripheral T-cell lymphoma in mice.
SRP070644Next Generation Sequencing Facilitates Quantitative Analysis of Wild Type Young and Old muscle Transcriptomes
SRP070645Stella prevents excessive de novo DNA methylation during mouse oogenesis
SRP070646The transcriptome of central nervous system myelin
SRP070649Longitudinal transcriptome profiling of post-treatment Lyme disease syndrome
SRP070650Tomato plants increase their tolerance to low temperatures in a chilling acclimation process entailing comprehensive transcriptional and metabolic adjustments
SRP070653Genomic analysis of N. crassa histone H1
SRP070654DUX4 recruits p300/CBP through its C-terminus and induces global H3K27 acetylation changes
SRP070655Ligation-Free Ribosome Profiling Reveals Cell Type-Specific Regulation of Protein Synthesis in the Brain
SRP070656Next Generation Sequencing Study of Circadian Changes in Transcriptome of Rhesus Macaque Pineal Gland and Retina
SRP070657An integrative transcriptomics approach identifies miR-503 as a candidate master regulator of the estrogen response [RNA-seq]
SRP070659An integrative transcriptomics approach identifies miR-503 as a candidate master regulator of the estrogen response [miRNA-seq]
SRP070660DSBCapture: in situ capture and direct sequencing of dsDNA breaks
SRP070664Histone modification and transcription factor ChIPseq of Xenopus laevis epithelial progenitors
SRP070665Changes at the nuclear lamina alter binding of pioneer factor Foxa2 in aged liver.
SRP070668Effect of BB608 on Gene Expression in HNSCC Cell Line
SRP070670FOXF1 inhibits endothelial barrier function in the lung and transcriptionally activates the gene for the S1PR1 receptor
SRP070673Molecular phenotyping of multiple mouse strains under metabolic challenge uncovers Elovl2 as a novel regulator of glucose-induced insulin secretion
SRP070676Solanum lycopersicum Raw sequence reads
SRP070686Macrophages Mediate the Repair of Brain Vascular Rupture through Direct Physical Adhesion and Mechanical Traction
SRP070687Next Generation Sequencing Facilitates Quantitative Analysis of colorectal cancer cells transfected with NC siRNA or RPL9 siRNA
SRP070691RNA sequencing reveals differential expression of genes associated with an altered morphology of rumen papillae in lactating dairy cows fed diets with various forage sources
SRP070692Transcriptomic analysis of the marine oil-degrading bacterium Acinetobacter venetianus RAG-1 reveals genes important in dodecane uptake and utilization.
SRP070693Hela cell line microRNA profiles following CFIm25 knockdown
SRP070694BASP1 modifies the Tamoxifen response
SRP070695Transcriptome analyses of cerebral ischemia reveal functional lncRNAs in ischemia stroke
SRP070698Transcriptome sequencing of three yeast strains
SRP070701H3K4me3 ChIP in multiple myeloma MM1S cells in the presence and absence of KDM5-C70
SRP070702robust statistical modeling improves sensitivity of high-throughput rnA structure probing experiments
SRP070703Pervasive TTP binding but selective target mRNA destabilization in the macrophage transcriptome [RNA-Seq_2]
SRP070705Effect of BB608 on STAT3 DNA Binding in HNSCC Cell Line
SRP070706SPOP mutation confers intrinsic BET inhibitor resistance in prostate cancer (BRD4_JQ1_RNA-seq)
SRP070709Comparative transcriptomics of Clostridium thermocellum wild type (?hpt) and Type I glutamine synthetase (Clo1313_2031) deletion strains using RNA-seq
SRP070710mRNA expressions in pre-treatment melanomas undergoing anti-PD-1 checkpoint inhibition therapy
SRP070711BET inhibition releases the Mediator complex from specific cis elements in acute myeloid leukemia cells (ChIP-Seq II)
SRP070713BET inhibition releases the Mediator complex from specific cis elements in acute myeloid leukemia cells (RNA-Seq II)
SRP070715Remission for loss of odontogenic potential in a new micromilieu in vitro
SRP070723Comparison of HCC cell lines and primary HCCs-RNAseq data
SRP070745The mRNA-bound proteome of the early fly embryo
SRP070746The role of PIWIL4 in breast cancer
SRP070750RNA 5'end sequencing in polysome profiling fractions
SRP070753Mitochondrial stress induces chromatin reorganization to promote longevity and UPRmt
SRP070757MacroH2A1.1 regulates mitochondrial respiration by limiting nuclear NAD+ consumption
SRP070758ChIP-seq. analysis of pan-histone 3 acetylation in Romidepsin treated TCam-2
SRP070760Lsd1 ChIP-Seq in trophoblast stem cells
SRP070761Late pre-B cell transcriptomes from Zfp36l1 Zfp36l2 double knockout mice [RNA-Seq]
SRP070762Late pre-B cell transcriptomes from Zfp36l1 Zfp36l2 double knockout mice [iCLIP]
SRP070767Transcriptome profiling in knock-in mouse models of Huntington''s disease (cerebellum_mRNA).
SRP070768RNA-SEQ assay for wild type and CRISPR induced endoglin knockout human pulmonary artery smooth muscle cells (PASMC)
SRP070769Transcriptome profiling in knock-in mouse models of Huntington''s disease (cortex_mRNA).
SRP070770Transcriptome profiling in knock-in mouse models of Huntington''s disease (liver_mRNA).
SRP070775Transcriptome profiling in knock-in mouse models of Huntington''s disease (striatum_mRNA).
SRP070776Activin A regulates human T follicular helper (Tfh) cell differentiation
SRP070777Oxidative stress related long non-coding RNAs (lncRNAs) in human umbilical vein endothelial cells
SRP070778Modeling the ESR1 tyrosine 537 mutation with CRISPR-Cas9 for mechanistic studies and evaluation of therapeutic approaches for metastatic breast cancer [ChIP-Seq]
SRP070779Modeling the ESR1 tyrosine 537 mutation with CRISPR-Cas9 for mechanistic studies and evaluation of therapeutic approaches for metastatic breast cancer [RNA-Seq]
SRP070782Mouse MORC3 is a GHKL ATPase involved in gene silencing and localizes to H3K4me3 marked chromatin
SRP070784Improved growth of Clostridium thermocellum AG553 via medium supplementation with formate and strain evolution
SRP070790MRTF/SRF link the cytoskeleton and hedgehog pathway in drug-resistant basal cell carcinomas
SRP070791Genome-wide identification of microRNAs in pomegranate (Punica granatum L.) by high throughput sequencing
SRP070793Transcriptome analysis of aging mouse meibomian glands
SRP070800Damrongia clarkeana Raw sequence reads
SRP070810Dissecting stages of human kidney development and Tumorigenesis with surface markers affords simple prospective Purification of nephron stem cells
SRP070814Regulation of Th17 cell pathogenic function by miR-183/96/182
SRP07081524hr CA treatment vs. DMSO in HCT116 cells (from ''Identification of CDK8 and CDK19 substrates in human cells using cortistatin A and quantitative phosphoproteomics'')
SRP070818Enhanced CLIP uncovers IMP protein-RNA targets in human pluripotent stem cells important for cell adhesion and survival [eCLIP-Seq]
SRP070819Enhanced CLIP uncovers IMP protein-RNA targets in human pluripotent stem cells important for cell adhesion and survival [RNA-Seq]
SRP070822Single cell transcriptomic profiling of mouse pancreatic progenitors
SRP070828Identification Of Candidate Anti-Cancer Molecular Mechanisms Of Compound Kushen Injection Using Functional Genomics
SRP070829Panicum virgatum Transcriptomic Responses to Aphid Pressure
SRP070832Reduced expression of ABCB4 is linked to an inflammatory phenotype of biliary atresia in mice and men
SRP070834Changes in the erythroblast miRNA profile in the bone marrow of a Plasmodium vivax-infected patient
SRP070835Transcriptomes of individual substantia nigra pars reticulata neurons
SRP070836Next Generation Sequencing for Quantitative Analysis of transcriptome of follicular compared to non-follicular CD8 T cells from HIV+ Lymph nodes
SRP070838Roles of different regions in dairy nitrogen conversion: transcriptome based insights on utilization of low quality forage resources
SRP070840Capicua-dependent transcriptional changes in human cancer cell lines treated with trametinib
SRP070841Effect of tail domain and kinase domain mutations in BMPR2 on gene expression in rat Hc92 cells studied by RNA-Seq
SRP070842Comparison of gene expression in seminiferous tubules of 3 month old calf versus 9 month old calf using RNA-Seq
SRP070843RNA sequencing of siSNRNP40 in breast cancer cells
SRP070845Activity-dependent transcriptional changes in human neurons
SRP070846Combination targeted therapy to disrupt aberrant oncogenic signaling and reverse epigenetic dysfunction in IDH2- and TET2-mutant acute myeloid leukemia (RRBS)
SRP070849Combination targeted therapy to disrupt aberrant oncogenic signaling and reverse epigenetic dysfunction in IDH2- and TET2-mutant acute myeloid leukemia (RNA-Seq)
SRP070853Key regulators in two different colorectal cancer cell lines 1638N-T1 vs. CMT-93
SRP070880Estrogen and mTORC1 dependent genes in the uterus of uterine-specific Tsc2-null mice
SRP070882Comparison of age-related changes in gene expression of 2 rat skeletal muscles (8 months, 18 months and 24 months)
SRP070884Next Generation Sequencing Analysis of control and SRSF2-/- Huh7 cells Transcriptomes
SRP070888Molecular response of Sargassum vulgare to acidified waters in natural CO2 vents – Insights from de novo transcriptomic analysis
SRP070890Not All H3K4 methylations are Created Equal: Mll2/COMPASS Dependency in Primordial Germ Cell Specification
SRP070893Genome-wide mapping of autonomous promoter activity in human cells
SRP070895Zika Virus Targets Human Cortical Neural Precursors and Attenuates Their Growth
SRP070896Direct conversion of rodent fibroblasts into myelinating induced Schwann cells
SRP070900Genome-wide distribution of Pbx1/2/3 in mouse cortex at embryonic day 12.5 [ChIP-seq]
SRP070902Transcriptional Regulationand Chromatin Dynamics inHuman Epithelial Cell Differentiation (RNA-seq)
SRP070903Analysis of gene expression changes in early mouse embryos lacking Tgif1 and Tgif2
SRP070904Genome-wide binding sites for Arabidopsis REPLUMLESS
SRP070905CRISPResso: sequencing analysis toolbox for CRISPR genome editing
SRP070906Toxic gain of function from mutant FUS protein is crucial to trigger cell autonomous motor neuron loss
SRP070916Epigenome characterization at single base-pair resolution
SRP070918Time course transcriptional profiles of the Arabidopsis thaliana response to flg22 infiltration for all combinatorial genotypes of the alleles dde2-2, ein2-1, pad4-1, and sid2-2.
SRP070937Transcriptional profiles of drought-related genes in modulating metabolic processes in Lolium multiflorum
SRP070944GRN knockout, sorted brain cells
SRP070945RNAseq comparison of WT vs Progranulin KO brain
SRP070946Transcriptome of liver tissue in 5 week old Stabilin-1 knock-out mice
SRP070947Quantifying variation within the bacterial species E. coli
SRP070948p62/SQSTM1 by binding to vitamin D receptor inhibits hepatic stellate cell activity, fibrosis and liver cancer
SRP070950Polycomb Repressive Complex-2 (PRC2) regulates intestinal homeostasis.
SRP070951Genetic architecture of gene expression underlying variation in host response to porcine reproductive and respiratory syndrome virus infection
SRP070956Comparative virulence studies and transcriptome analysis of Staphylococcus aureus strains isolated from animals
SRP070959Natural DNA methylation variation in Lotus japonicus
SRP070960RNA-seq analysis of seasonal and individual variation in blood transcriptomes of healthy captive bottlenose dolphins
SRP070961Signaling couples hair follicle stem cell quiescence with reduced histone H3K4/K9/K27me3 for proper tissue homeostasis
SRP070962Gene trapping in the Asian malaria vector, Anopheles stephensi
SRP070963Next Generation Sequencing Facilitates Comparison of Long-Term Cultured Nephron Progenitor Cells with Their Cognate Primary Cells
SRP070989CEL-Seq2: sensitive highly-multiplexed single-cell RNA-Seq
SRP070990Nrf2 bindng in C2C12 myotubes
SRP070995Trophoblast stem cells (TSC) global transcriptome in stemness conditions after treatment with Lsd1 inhibitor or induction of Lsd1 depletion [RNA-seq]
SRP070996The genomic landscape of pediatric T-cell acute lymphoblastic leukemia reveals novel X-linked somatic mutations associated with apoptosis resistance. [RNA-Seq]
SRP070997The genomic landscape of pediatric T-cell acute lymphoblastic leukemia reveals novel X-linked somatic mutations associated with apoptosis resistance. [Exome-Seq]
SRP070998RNA sequencing of Mycobacterium abscessus under infection-relevant conditions
SRP070999Transcriptome analysis of Macrobrachium nipponense : genes and expression profile from hepatopancreas and muscle
SRP071005Transcriptome profiling in knock-in mouse models of Huntington''s disease [Cerebellum_miRNA]
SRP071006Transcriptome profiling in knock-in mouse models of Huntington''s disease [Cortex_miRNA]
SRP071007Transcriptome profiling in knock-in mouse models of Huntington''s disease [Liver_miRNA]
SRP071008Transcriptome profiling in knock-in mouse models of Huntington''s disease [Striatum_miRNA]
SRP071012Genome-wide high resolution map of transcription start sites across the life cycle of Oikopleura dioica
SRP071014Effects of RPAP1 depletion on mRNA gene expression (RNA-seq) and RNA Pol II abundance (ChIP-seq) in primary mouse embryonic fibroblasts or embryonic stem cells.
SRP071015Transcriptomic response of Podospora anserina to bacterial and fungal non self
SRP071016Regulation of gene expression under extreme desiccation: hijacking of heat shock regulatory system.
SRP071035Dissection of a super-enhancer in vivo (ATAC-seq)
SRP071039Novel neuroprotective and neurogenic phenotype of microglia
SRP071040Heterotypic nucleosomes and PRC2 drive DIPG oncogenesis
SRP071049Genome-wide profiling of mTOR-dependent translation in Oikopleura dioica
SRP071050Identifying the genome-wide genetic variation between precocious trifoliate orange and its wild type and developing new markers for genetics research
SRP071051Human NPY/AgRP hypothalamic cell lines for study of obesity susceptibility (miRNA-Seq)
SRP071055Investigation on the anaerobic propionate degradation by Escherichia coli K12
SRP071056B-cell Division DNA methylation [RRBS_2]
SRP071058B-cell Division RNA-seq [RNA-Seq]
SRP071061Transcriptome analysis of cryptococcal IPK mutants
SRP071063The cohesin associated protein Wapal is required for proper polycomb-mediated gene silencing [Ring1b ChIP-seq]
SRP071068Dissection of a super-enhancer in vivo (Capture-C)
SRP071071Next generation sequencing of Desulfovibrio vulgaris Hildenborough in the presence of Free Nitrous Acid stress
SRP071073Dissection of a super-enhancer in vivo (ChIP-seq)
SRP071075Ultraefficient irCLIP platform for characterization of protein-RNA interactions
SRP071076Arabidopsis AtMORC4 and AtMORC7 form Nuclear Bodies and Repress a Large Number of Protein-Coding Genes
SRP071085Single cell transcriptome analysis of mouse thoracic sympathetic ganglia
SRP071087Investigation of the effect of succinate and dimethyl malonate on murine bone-marrow derived macrophages (BMDMs) treated with or without LPS
SRP071088Tricyclic Antidepressants Induce Inactivation of Hepatic Stellate Cell (HSC) Myofibroblasts
SRP071089Peptide-signaling and miRNA regulation of transmitter switching affecting social preference
SRP071090Prospective identification and lineage tracing of top-level hematopoietic stem cells that sustain adult hematopoiesis
SRP071123Classical dendritic cells are required for dietary antigen-mediated peripheral regulatory T cell and tolerance induction I
SRP071124Classical dendritic cells are required for dietary antigen-mediated peripheral regulatory T cell and tolerance induction II
SRP071136Cell-type dependent enhancer binding of the EWS/ATF1 fusion gene in clear cell sarcomas
SRP071137A long noncoding RNA lincRNA-EPS acts as a transcriptional brake to restrain inflammation
SRP071138HLH-30/TFEB-mediated autophagy functions in a cell-autonomous manner for epithelium intrinsic cellular defense against bacterial pore-forming toxin in C. elegans
SRP071139A Domestication-Selected Retrotransposon for Quenching Genomic Immunity in Rice [RNA-Seq]
SRP071140RNA-seq analysis of Fusarium graminearum Z-3639 in heat stress
SRP071141Genome-wide quantitative core promoter activity maps reveal a wide range of sequence-intrinsic transcription initiation strengths
SRP071142Panax japonicus Transcriptome or Gene expression
SRP071144Time-ChIP in ESCs and NSCs
SRP071145RNAseq analysis of the colon of intestine-specific adult Nkx2.2 mutant mice
SRP071147A Domestication-Selected Retrotransposon for Quenching Genomic Immunity in Rice [small RNA-Seq]
SRP071148Gene and retrotransposon expression analysis in the F1 hybrid background of B6 and MSM for WT, Pld6 KO, and Dnmt3l KO male germ cells
SRP071149ChIP-seq for Polycomb group proteins and H3K27me3 in ESCs and NSCs
SRP071150Using single-cell RNA-Seq for unbiased analysis of developmental hierarchies (single cell RNA Seq of Gfi1-/- Irf8-/- GMP)
SRP071152CHIP-seq KAT2B in mouse isolated islet
SRP071155Tracing Enhancer Networks using Epigenetic Traits (TENET)
SRP071156Genome-wide expression profiles from mouse Phf13 wildtype and knockout testes
SRP071158Whole transcriptome profiles of different brain regions from a Chlorocebus sabaeus model of Parkinson's disease with and without human parthenogenetic stem cell derived neural stem cell transplantation.
SRP071170Enhanced T cell responses to IL-6 in type 1 diabetes are associated with early clinical disease and increased IL-6 receptor expression
SRP071173Yoldia eightsii Transcriptome or Gene expression
SRP071178DC-SCRIPT binds GA-rich enhancers to control MAPK-signaling and IL-10 production in human dendritic cells
SRP071180GenomeTrakr Project: SDSU Veterinary & Biomedical Sciences/ DOH South Dakota
SRP071194Metabolic regulation of muscle stem cell epigenetic landscape during regeneration
SRP071195Differentially expressed vascular development genes for iPSC-ECs from CDI
SRP071197Huntingtin aggregation impairs autophagy leading to Argonaute-2 accumulation and global microRNA dysregulation
SRP071198Discovery of first-in-class reversible dual small molecule inhibitors against G9a and DNMTs with in vivo activity in hematological malignancies [RNA-Seq]
SRP071199Dual RNA-sequencing of host and pathogen during Plasmodium berghei infection of hepatocytes in vitro
SRP071203Systematically characterizing dysfunctional long intergenic non-coding RNAs in multiple brain regions of major psychosis
SRP071204HOX gene complement and expression in the planarian Schmidtea mediterranea
SRP071205Gene expression profile of chemical-induced neural stem cells from defined fibroblasts
SRP071207Epigenetic Analysis of Eµ-Myc B-cell lymphoma using both H3K27me3 CHiP-Seq and Bisulfite-Seq (reduced representation).
SRP071212Next Generation Sequencing Facilitates Quantitative Analysis of Wild Type (Col), hda6, hda5, hda9, fld and fve mutants
SRP071214Sox2 is the determining oncogenic switch in promoting lung squamous cell carcinoma from different cells-of-origin
SRP071215Identification and Characterization of the Glucose Dual-transporter System: Pleiotropic Roles in Nutrient Transport, Signaling, and Carbon Catabolite Repression in Neurospora crassa
SRP071217RNAseq profiling of FACS-sorted zebrafish larval macrophages reveals similarities with human M1 and M2 transcriptome signatures
SRP071218Glial cell-derived neuroregulators control type 3 innate lymphoid cells and gut defence
SRP071219Association with Aurora-A controls N-MYC-dependent promoter escape and pause release of RNA polymerase II during the cell cycle
SRP071226RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391)
SRP071231Dose-Response Analysis of RNA-Seq Profiles in Archival Formalin-Fixed Paraffin-Embedded (FFPE) Samples
SRP071232Modeling the Neuropathology of Tuberous Sclerosis with Human Stem Cells Reveals a Role for Inflammation and Angiogenic Growth Factors [Cell Model]
SRP071233Iron-Heme-Bach1 Axis Is Involved In Erythroblast Adaptation To Iron Deficiency
SRP071235Modeling the Neuropathology of Tuberous Sclerosis with Human Stem Cells Reveals a Role for Inflammation and Angiogenic Growth Factors [Treatment]
SRP071237Foxa2 identifies a novel ventricular-specific cardiac progenitor population during gastrulation.
SRP071238Differential gene expression analysis of follistain treated skeletal muscle
SRP071239Progenitor Cell Marker Aldehyde Dehydrogenase 1a3 Defines a Subset of Failing Pancreatic Beta Cells in Diabetic Mice
SRP071241Comparison of gene expression between female Schistosoma mansoni heads and tails
SRP071244Lincomycin effect on PIFq-regulated transcriptome
SRP071245Effective Detection of Variation in Single Cell Transcriptome using MATQ-seq
SRP071246RNA in Fetal Bovine Serum Interferes with Cell Culture Studies
SRP071248Hd3a, RFT1 and Ehd1 integrate photoperiodic and drought stress signals to delay the floral transition in rice
SRP071251Transcriptome of WT mouse embryonic stem cells
SRP071252Transcriptome of new DGCR8_KO mouse embryonic stem cells generated by paired CRISPR/Cas9 approach
SRP071253Genome-wide chromatin landscape of chemical-induced neural stem cell reprogramming from defined fibroblasts
SRP071257Genome-wide chromatin binding of Elk1 and Gli2 in chemical induced neural reprogramming
SRP071259Transcriptome of new Dicer_KO mouse embryonic stem cells generated by paired CRISPR/Cas9 approach
SRP071275MNase titration reveals differences between nucleosome occupancy and chromatin accessibility
SRP071287Two Conserved Histone Demethylases Regulate Mitochondrial Stress-Induced Longevity
SRP071298Demonstration of novel piRNA production in chromosome-fusion containing Oxytricha
SRP071302Analysis of differential gene expression in Drosophila dIME4 null mutants [paired-end]
SRP071304Characterisation of Transcriptional Changes in the Spinal Cord of the Progressive Experimental Autoimmune Encephalomyelitis ABH Mouse Model by RNA Sequencing
SRP071306Genome-wide expression ChIP analysis of mouse PHF13 in testis
SRP071308Transcriptomic profile of several temperate extrachromosomal actinobacteriophages during various stages of growth
SRP071310Gene expression profiling shows that combination of jazQ and phyB-9 mutations promotes additive and enhanced expression of growth- and defense-related genes
SRP071311Sex Bias in CNS Autoimmune Disease Mediated by Androgen Control of Autoimmune Regulator
SRP071312RNA sequencing identifies differentially expressed genes in adult left ventricles following in utero caffeine exposure during embryonic day 6.5-9.5
SRP071313Analysis of differential gene expression in Drosophila dIME4 null mutants [single-end]
SRP071314Transcriptome profile of rice genotypes IR24 and IRBB67 in interaction with Xanthomonas oryzae pv. oryzae under two temperature regimes
SRP071316Functional characterization of DNA methylation in the oligodendrocyte lineage [RNASeq_Dnmt1cKO_OPC]
SRP071317MicroRNA-SEQ analysis of kidney and liver damage in rat
SRP071321Extensive cryptic splicing upon loss of RBM17 and TDP43 in neurodegeneration models
SRP071331KSHV Infection Mimics the Hypoxic Response Based on Next-Generation Sequencing [mRNA-Seq]
SRP071332Expression profiling of IL-13 stimulated PBMCs with and without an IL-13R antagonist
SRP071333Transcriptomic analysis of wild type and Del(Hotair)-/- mouse tissues
SRP071334KSHV Infection Mimics the Hypoxic Response Based on Next-Generation Sequencing [miRNA-Seq]
SRP071335STR-Seq: a massively parallel microatellite sequencing and genotyping technology
SRP071338An oncogenic Ezh2 mutation cooperates with particular genetic alterations to induce tumors in mice and redistributes H3K27m3 through the genome [RNA-seq]
SRP071339Functional characterization of open chromatin in bidirectional promoters of rice
SRP071341An oncogenic Ezh2 mutation induces tumors in mice through redistribution of global H3K27 trimethylation
SRP071342Identifying genes differentially expressed in MDCK cells with scribble knock-down (scribKD)
SRP071350Dynamic gene regulatory networks of human myeloid differentiation [ATAC-seq]
SRP071355Store-operated Ca2+ entry in follicular T cells controls humoral immune responses and autoimmunity
SRP071356Reorganization of HoxD regulatory landscapes during the evolution of a snake-like body plan (4C-seq)
SRP071547Dynamic gene regulatory networks of human myeloid differentiation [RNA-seq]
SRP071548Reorganization of HoxD regulatory landscapes during the evolution of a snake-like body plan (ChIP-seq)
SRP071556MicroRNA sequencing from ventricles of Sham and TAC mice treated with antimiR-control and antimiR-34
SRP071565Symplocos paniculata Transcriptome or Gene expression
SRP071568Raw sequence reads of leaf transcriptome of guar (Cyamopsis tetragonoloba, L. Taub.)
SRP071570Synergistically acting agonists and antagonists of G protein–coupled receptors prevent photoreceptor cell degeneration
SRP071571ATAC-seq of sorted lung cDCs (conventional dendritic cells) from cell-specific MyD88 KO at 0h and 6h in vivo sensitization with OVA/standard flagellin
SRP071573A molecular basis behind heterophylly in an amphibious plant, Ranunculus trichophyllus
SRP071574Tracking transcript abundance changes of D. vulgaris co-cultures with M. maripaludis in fluctuating resource environment
SRP071580Interleukin 4 induces apoptosis of acute myeloid leukemia cells in a Stat6-dependent manner
SRP071584Mus musculus circSeq raw sequence reads
SRP071587The midguts transcriptome of Aedes aegypti (Liverpool strain) females knock down AaMesh and feed AaMesh antibody versus those knock down GFP and feed pre-immune.
SRP071588H3K4me1 ChIP-seq in murine pre-B cells
SRP071610REV-ERBa influences stability and nuclear localization of the glucocorticoid receptor
SRP071611Analysis of the expression profile of skin macrophages FACS-sorted from mice overexpressing activin and/or oncogenes of human papilloma virus 8 in keratinocytes.
SRP071612Identification of viral ncRNA-mRNA interactions in Herpesvirus saimiri-infected marmoset T cells
SRP071613TET2 Regulates Mast Cell Differentiation and Proliferation through Catalytic and Non-catalytic Activities.
SRP071614Dynamics of yeast ISWI and CHD chromatin remodeler genomic association (part 2)
SRP071615Candida albicans SC5314 Transcriptome or Gene expression
SRP071616RNA-seq studies using wheat PHYTOCHROME B and PHYTOCHROME C mutants reveal shared and specific functions in the regulation of flowering and shade-avoidance pathways
SRP071617Genomic distribution of 5-hydroxymethylcytosine in mouse kidney and its relationship with gene expression
SRP071624Suaeda maritima Transcriptome or Gene expression
SRP071635Alternative splicing regulation by homologous Muscleblind proteins
SRP071636Visualizing germinal center B cell dynamics at single cell transcriptome resolution
SRP071641Inactivation of Oncogenic cAMP-specific Phosphodiesterase 4D by miR-139-5p in Response to p53 Activation
SRP071643SC3-consensus clustering of single cell RNA-Seq data
SRP071646Picea abies Targeted Locus (Loci)
SRP071652Ptbp2 controls an alternative splicing network required for cell communication during spermatogenesis [HITS-CLIP]
SRP071653Ptbp2 controls an alternative splicing network required for cell communication during spermatogenesis [RNA-Seq]
SRP071655A novel hybrid two-component system Lvr mediates virulence and global regulation in pathogenic Leptospira
SRP071656GenomeTrakr Project: New Mexico State University, Food Safety Laboratory
SRP071658Identification of preoptic sleep-promoting neurons based on projection target
SRP071659Gene expression profile using RNA-seq in WC00060 or SR-0788 cells transfected with siRNA for KPC1 or control
SRP071660Gene expression profile in IM-0223 cells transfected with KPC1 or control vector using RNA-seq
SRP071661YAP/TAZ control peripheral myelination by regulating Schwann cell proliferation and the expression of laminin receptors
SRP071663Expression Profiling of Term Placenta in Viviparous Mammals by RNA-Seq
SRP071664MOG KO Tregs versus WT Tregs
SRP071665Recessive mutations in TRMT10C cause defects in mitochondrial RNA processing and multiple respiratory chain deficiencies
SRP071666Arabidopsis thaliana Col-0 inflorescence small RNAs
SRP071668AR and ERG ChIP-seq in presence or absence of PRMT5
SRP071671Optimized Approaches for Generation of Integration-free iPSCs from Human Urine-derived Cells with Small Molecules and Autologous Feeder
SRP071672HEK293 cells 100 cell RNAseq profiling on Illumina NextSeq 500
SRP071673Genome-wide map of EBF1, H3K4me2 and H3K27me3 marks to unravel the EBF1 C-terminus domain function
SRP071674Genome-wide EBF1 occupancy in pro-B cells
SRP071675Double knockout of Bach1 and Bach2 reveals shared compensatory mechanisms in regulating alveolar macrophage function and lung surfactant homeostasis [ChIP-Seq]
SRP071676Genome-wide DHS study to unravel the function of EBF1 C-terminus domain
SRP071680Gene transcription in ovine fetal perirenal adipose tissue.
SRP071682Repression of interstitial cell identity in nephron progenitor cells by Pax2 establishes the nephron-interstitium lineage boundary throughout mammalian kidney development
SRP071683IGF2BP3 controls cancer cell invasiveness by modulation RISC function
SRP071685Genome-wide distribution of Pbx1/2/3 in mouse cortex at embryonic day 15.5 [ChIP-seq]
SRP071698A Domestication-Selected Retrotransposon for Quenching Genomic Immunity in Rice [MeDIP-seq]
SRP071699A Domestication-Selected Retrotransposon for Quenching Genomic Immunity in Rice [Bisulfite-seq]
SRP071700Coupling between alternative polyadenylation and alternative splicing is limited to terminal introns
SRP071702RNA-seq analysis of control and podoplanin knockdown lymphatic endothelial cells
SRP071707H. cyanoguttasH. minckleyi Raw sequence reads
SRP071724hydrogen production Raw sequence reads
SRP071727The Nuclear Receptor Rev-erb alpha Regulates Adipose Tissue-Specific FGF21 Signaling (ChIP-seq, eWAT)
SRP071728The Nuclear Receptor Rev-erb alpha Regulates Adipose Tissue-Specific FGF21 Signaling (GRO-seq)
SRP071729Rev-erb alpha citrome in brown adipose tissue
SRP071732RNAseq of pre-T cells from control and Zfp36l1, Zfp36l2 double conditional knockout mice.
SRP071733Pre-T cells from control and Zfp36l1, Zfp36l2 double conditional knockout mice. [iCLIP]
SRP071735West Nile virus raw sequence reads from experimentally infected mosquito tissues
SRP071738Mechanisms and disease associations of haplotype-dependent allele specific DNA methylation: Methyl-seq data for the identification of hap-ASM
SRP071739Changes in RNA expression in human oral cavity carcinoma cells as a result of LDB1 reduction
SRP071743The dose-dependent role of PU.1 in Myeloid differentiation [ChIP-Seq]
SRP071744The dose-dependent role of PU.1 in Myeloid differentiation [small RNA-Seq]
SRP071752Molecular Mechanisms Contributing to the Growth and Physiology of an Extremophile Cultured with Dielectric Heating
SRP071754Transcriptomic analysis of liver of WT and p21KO mice upon 24h fasting
SRP071755Gossypium hirsutum root tissue tillage trial
SRP071757Gasterosteus aculeatus Genome sequencing
SRP071758Airway epithelial cells from smokers with and without bronchial premalignant lesions
SRP071760Airway epithelial cells from high-risk subjects obtained via multiple bronchoscopy procedures to follow bronchial premalignant lesions as part of lung cancer screening
SRP071770Identification of methylation haplotype blocks aids in deconvolution of heterogeneous tissue samples and tissue-of-origin mapping from plasma DNA [Tumor RRBS]
SRP071771Identification of methylation haplotype blocks aids in deconvolution of heterogeneous tissue samples and tissue-of-origin mapping from plasma DNA [WGBS]
SRP071772Ikaros regulates gene expression downstream of TCR signaling
SRP071773Regulation of T-cell receptor signaling induced gene expression by the zinc finger transcription factor Ikaros.
SRP071778high-throughput transciptome study for rhesus macaque
SRP071779DNA methylation profile of triple negative breast cancer-specific genes (MBD-Seq)
SRP071780Genome-wide analysis of RNA polymerase II termination at protein-coding genes
SRP071781Mammalian sperm exhibit epigenetic priming of embryonic and adult regulatory landscapes (ATAC-Seq)
SRP071782Mammalian sperm exhibit epigenetic priming of embryonic and adult regulatory landscapes (BS-Seq)
SRP071783Mammalian sperm exhibit epigenetic priming of embryonic and adult regulatory landscapes (ChIP-Seq)
SRP071784Mammalian sperm exhibit epigenetic priming of embryonic and adult regulatory landscapes (HiC-Seq)
SRP071785Yersinia pestis strain:Nairobi Genome sequencing
SRP071787Yersinia pestis Pestoides G Genome sequencing
SRP071789Routine surveillance of E. coli and Shigella by Public Health England
SRP071792RNA-Sequencing of Klf6 silenced oligodendrocytes
SRP071793ChIP-Seq of Klf6 in oligodendrocytes
SRP071802Microglia self-renewal comprises context-dependent random or clonal expansion.
SRP071806Carcinoma-astrocyte gap junctions promote brain metastasis by cytosolic dsDNA response transfer
SRP071811Identification of long noncoding RNAs regulated by p53
SRP071813A role for HOX13 proteins in the regulatory switch between TADs at the HoxD locus
SRP071814High Temperature on Immune Response of Grass Carp
SRP071815The second subunit of DNA-polymerase delta is required for genomic stability and epigenetic regulation
SRP071818The functions of m6A and Ythdf2 during zebrafish early development
SRP071827Cynoglossus semilaevis LS_HS Raw sequence reads
SRP071833DNA Methylation profile for male SD Rats with and without traumatic brain injury (TBI) by RRBS-Seq
SRP071837Stimulation of isolated plasmacytoid dendritic cells (pDCs) with TLR9 agonist CpG C (CpG) and TLR7 agonist imiquimod (IMQ)
SRP071838Transcript profiling of the roots and leaves of opt3-2 mutant and wild type Arabidopsis
SRP071841Identification of methylation haplotype blocks aids in deconvolution of heterogeneous tissue samples and tissue-of-origin mapping from plasma DNA [Plasma RRBS]
SRP071843Identification of RNA interacting with the sRNA sponge 3'ETSleuZ
SRP071848Tdrd6a recruits Ziwi-bound piRNAs and coordinates deposition of germ plasm mRNAs into primordial germ cells [scRNA-Seq]
SRP071849Tdrd6a recruits Ziwi-bound piRNAs and coordinates deposition of germ plasm mRNAs into primordial germ cells [RIP-Seq]
SRP071854Parental allele specific single-cell transcriptome dynamics reveal incomplete epigenetic reprogramming in human female germ cells
SRP071858BET bromodomain proteins function as master transcription elongation factors independent of CDK9 recruitment [ChIP-seq]
SRP071860BET bromodomain proteins function as master transcription elongation factors independent of CDK9 recruitment [RNA-seq]
SRP071861BET bromodomain proteins function as master transcription elongation factors independent of CDK9 recruitment [NET-seq]
SRP071863Comparison of Glomerular and Podocyte mRNA Profiles in eNOS-/- Diabetic Mice Induced by Streptozotocin
SRP071864m6A controls neurogenesis and sex determination in Drosophila via its nuclear reader protein YT521-B [RNA-Seq, heads]
SRP071865m6A controls neurogenesis and sex determination in Drosophila via its nuclear reader protein YT521-B [RNA-Seq, S2R+ cells]
SRP071866m6A controls neurogenesis and sex determination in Drosophila via its nuclear reader protein YT521-B [MeRIP-Seq, S2R+ cells]
SRP071867Identification of transcripts whose abundance changes in response to acute switches in DSX isoform in the ovary and testis
SRP071868Transcriptional Basis of Neuronal Diversity in the Mammalian Brain
SRP071870Strand-oriented RNAseq of LNCaP prostate cancer cells in culture for 48 h in the absence of androgen
SRP071871Scutigerina weberi Transcriptome or Gene expression
SRP071876Gene expression profiles of brain endothelial cells during embryonic development at bulk and single-cell levels
SRP071891Functional Haploid Human Oocytes Generated from Polar Body Genomes (Bisulfite-Seq)
SRP071896Transcriptional profile of Salmonella enterica serovar Typhimurium 4/74 wild-type and mutants using strand-specific RNA-seq
SRP071898Allele specific deletion of enhancer clusters within mouse F1 embryonic stem cells
SRP071899H3K27me3 ChIP-sequencing on LSK (Lin-Sca-1+c-kit+) cells isolated from control, MxCre Jak2VF/+ and MxCre Jak2VF/+ EZH2-/- mice
SRP071904AP-1 and TEAD4 co-operatively promote the vascular program during hemangioblast specification [ChIP-Seq]
SRP071905AP-1 and TEAD4 co-operatively promote the vascular program during hemangioblast specification [DNase-Seq]
SRP071907propionate production from glycerol Raw sequence reads
SRP071911propionate production from glucose Raw sequence reads
SRP071917Rhinopithecus bieti Genome sequencing and assembly
SRP071921EPOP interacts with Elongin BC and USP7 to modulate the chromatin landscape (Elongin B KO)
SRP071922Splicing-independent loading of TREX on nascent RNA is required for efficient transcription of dual-strand piRNA clusters in Drosophila
SRP071924Transcriptome Profile of Near-isogenic Soybean Lines for a-Subunit Deficiency during Seed Maturation
SRP071929Global transcript structure resolution of high gene density genomes through multi-platform data integration: Illumina RNA-Seq
SRP071930Global transcript structure resolution of high gene density genomes through multi-platform data integration: deepCAGE
SRP071931Hobit and Blimp1 instruct a universal transcriptional program of tissue-residency in lymphocytes
SRP071932The Glioma-Infiltrating T Cell Receptor Repertoire
SRP071933Genome-wide recruitment profiling of transcription factor Crz1 in response to high pH stress
SRP071934Comparative small RNA analysis of pollen development in autotetraploid and diploid rice
SRP071935The epigenetic impact of sampling procedures: Modulation of the clear cell renal cell cancer methylome following renal artery ligation?
SRP071939RNA-seq analysis of growth factor response of NHEKs to antimicrobial petide LL-37 and dsRNA mimic Poly(I:C)
SRP071940Effects of diets differing in energy and protein content on the adipose tissue transcriptome of Norwegian Red Heifers  
SRP071942Sensitivity and engineered resistance of myeloid leukemia cells to BRD9 inhibition (RNA-seq)
SRP071945A role for HOX13 proteins in the regulatory switch between TADs at the HoxD locus
SRP071947Genome-wide analysis of transcription, H2A.Z, nucleosomes and HSF1 dynamics in response to temperature increase in Arabidopsis thaliana [RNA-seq I]
SRP071948Genome-wide analysis of transcription, H2A.Z, nucleosomes and HSF1 dynamics in response to temperature increase in Arabidopsis thaliana [ChIP-seq & Mnase-seq]
SRP071950Polycomb-mediated deactivation of AR-feedback loop leads to castration-resistant prostate cancer [ChIP-seq]
SRP071951Role of light in cyanophage infection of Prochlorococcus
SRP071952Functional Haploid Human Oocytes Generated from Polar Body Genomes (RNA-Seq)
SRP071961TRANSCRITPTOME PROFILING OF SWIFTLET SPECIES
SRP071963Single-cell RNA-seq reveals disparate macrophage responses to intracellular Salmonella
SRP071964miRNA high-throughput sequencing of human prostate cancer cell lines P69, M12, M2182
SRP071965A blood RNA signature for tuberculosis disease risk: a prospective cohort study
SRP071966CLIC5: a novel ETV6 target gene in childhood acute lymphoblastic leukemia
SRP071967dsRNAs expressed in C. elegans development
SRP071968Neotoma albigula fecal microbial communities Targeted Locus (Loci)
SRP071969Single-cell RNAseq of mouse brain tissues across 3 developmental time points
SRP071973Integrated transcriptional analysis unveils the dynamics of cellular differentiation in the developing mouse hippocampus
SRP071975Effect of Anaplasma phagocytophilum infection on the micro RNA profile of Ixodes scapularis tick cells
SRP071978Pasha: a versatile R package for piling chromatin HTS data
SRP071987RNA-seq Transcriptome Profiling of Tiller Buds in the First Leaf Axil of Phytochrome B mutant (phyB-1) and Wild-type Sorghum from Initiation to Dormancy (phyB-1) and Outgrowth (wild-type)
SRP071990Genome-wide mapping of H4Ac in Legionella pneumophila-infected human macrophages
SRP072012Sensitivity and engineered resistance of myeloid leukemia cells to BRD9 inhibition (ChIP-seq)
SRP072015Rocaglates convert DEAD-box protein eIF4A into a sequence-selective translational repressor
SRP072020Sporanaerobacter acetigenes strain:DSM 13106 Genome sequencing
SRP072025Knockdown of ADNP in HCT116 colon cancer cells
SRP072029Single-cell qPCR, and bulk-level transcriptomics and epigenomics of treated macrophages
SRP072038Digitalis-like compounds facilitate redifferentiation of non-medullary thyroid cancer through intracellular Ca2+, cFOS and autophagy dependent pathways
SRP072040RNAseq of drought treated Populus trichocarpa
SRP072041IL-31 regulation of transcripts in skin
SRP072070Mode of action analysis: Distinct Staphylococcus aureus transcriptome changes upon antivirulence lactone treatment
SRP072072Omega-6 and omega-3 oxylipins are implicated in soybean oil-induced obesity
SRP072073Transforming growth factor-ß and Notch ligands act as opposing environmental cues in the plasticity of type 3 innate lymphoid cells
SRP072074CIS is a potent checkpoint in NK cell-mediated tumour immunity
SRP072076FPS down-regulation alters chloroplast development and triggers an sterol-dependent induction of JA-related and Fe deficiency transcriptional responses
SRP072089An Integrated miRNA Expression Atlas of Arabidopsis thaliana
SRP072091Transcriptional profile of C. elegans fed E. coli (OP50) and B. subtilis (PY79)
SRP072092Altered expression profile of long non-coding RNA and mRNA in mice cortex around bleeding areas after subarachnoid hemorrhage
SRP072095Integrative analysis of 3D nucleome and chromatin accessibility reveals a chromatin barrier established for T-lineage commitment during early T cell development [Dnase-Seq, HiC-Seq, Mnase-Seq, RNA-Seq]
SRP072096Temporal regulatory interactions of lipid metabolism and inflammation in defining macrophage inflammatory phenotype
SRP072101Direct GR binding sites potentiate clusters of TF binding across the human genome [3]
SRP072102Direct GR binding sites potentiate clusters of TF binding across the human genome [2]
SRP072105Direct GR binding sites potentiate clusters of TF binding across the human genome [4]
SRP072106The dynamic translatome of retinal ganglion cell axons during assembly and maintenance of the mouse visual system
SRP072107Direct GR binding sites potentiate clusters of TF binding across the human genome [5]
SRP072108Single-cell RNA-seq Reveals Unique Vascular Smooth Muscle Cell Phenotypes in Culture
SRP072109Direct GR binding sites potentiate clusters of TF binding across the human genome [7]
SRP072110Neonatally imprinted mesenteric lymph node stromal cell subsets induce tolerogenic dendritic cells [endogenous FSCs]
SRP072111Direct GR binding sites potentiate clusters of TF binding across the human genome [6]
SRP072113Direct GR binding sites potentiate clusters of TF binding across the human genome [8]
SRP072114Gene expression profiling of cell subpopulations from a mouse model of glioma
SRP072117Altered expression profile of long non-coding RNA and mRNA in mice cortex around injury focus after traumatic brain injury
SRP072118Isolator: accurate and consistent analysis of isoform-level expression in RNA-Seq experiments
SRP072119Fibrin Hydrogels Induce Mixed Dorsal/Ventral Spinal Neuron Identities During Differentiation of Human Induced Pluripotent Stem Cells
SRP072120Whole transcriptome analysis of UUO mouse model of renal fibrosis reveals new molecular players in kidney diseases
SRP072121RNA-seq analysis comparing WT, TAp63-null, and DNp63-null primary murine keratinocytes
SRP072122p63 ChIP-seq analysis comparing WT, TAp63-null, and DNp63-null primary murine keratinocytes
SRP072124Janus kinase 1 is essential for inflammatory cytokine signaling and mammary gland remodeling
SRP072125Arabidopsis FORGETTER1 sustains stress-induced transcription through nucleosome remodeling
SRP072131NR2E3 gene networks are associated with AHR signaling pathways
SRP072134Comparative transcriptome analysis by RNAseq of Necrotic Enteritis Clostridium perfringens in ligated intestinal chicken loops and in vitro conditions.
SRP072136The TfoY regulon of Vibrio cholerae.
SRP072137Genome-wide localisation of the bromodomain protein PfBDP1 in the malaria parasite P. falciparum
SRP072139Next Generation Sequencing Analysis of human embryonic stem cells derived MESP1-mTomato reporter cells
SRP072142Genomic of Tropical tree families Raw sequence reads
SRP072144Mangifera indica strain:Fusarium mangiferae Transcriptome or Gene expression
SRP072163Interaction between cyclooxygenase-2 and caspase-3 abolishes the cleavage of RNA-binding protein HuR and promotes drug resistance in oral squamous cell carcinoma
SRP072164Banana bulk and rhizosphere soil Raw sequence reads
SRP072165Difference in miRNA expression profiles of testes tissues from different breeder cock related to dietary intake of Astragalus Polysaccharide
SRP072166TERRA RNA antagonizes ATRX and protects telomeres
SRP072168Regulation of normal B cell differentiation and malignant B cell survival by OCT2 (ChIP-Seq)
SRP072171RNAseq analysis in peripheral blood leukocytes between control (normoxia) and hypoxic mice +/- bacterial infection.
SRP072172RNA sequencing of E11.5 Control and Prmt5cKO forelimbs
SRP072173Transcriptomic analysis of gene expression in adult Drosophila hemocytes
SRP072176Ridaforolimus (MK-8669) synergizes with Dalotuzumab (MK-0646) in hormone-sensitive breast cancer
SRP072177Direct GR binding sites potentiate clusters of TF binding across the human genome [1]
SRP072178Pretreatment microRNA expression impacting on epithelial to mesenchymal transition predicts intrinsic radiosensitivity in head and neck cancer cell lines and patients [miRNA-seq]
SRP072187SIRT6 suppresses pancreatic cancer through control of Lin28b [miRNA-seq]
SRP072188SIRT6 suppresses pancreatic cancer through control of Lin28b [ChIP-seq]
SRP072189LncRNA expression profiling of the early mesoderm reveals LncCPR as a novel regulator of cardiogenesis in mice
SRP072191Isolation and next generation sequencing of epididymal extracellular vesicles reveals segmental patterns of miRNA expression and a potential mechanism for modification of the sperm epigenome.
SRP072192RNA-Sequencing for Additional Molar Germs Transcriptomes at Stages of Early Development in Miniature Pigs
SRP0721981)Bacteria; 2)Wastewater treatment plant; 3)winter strain:E.coli Raw sequence reads
SRP072203Single-cell RNA sequencing reveals non-canonical brain macrophage activation states in murine neurotrauma
SRP072205Ribosome profiling-guided depletion of an mRNA improves CHO cell growth and recombinant product titers
SRP072207Next Generation Sequencing Facilitates Quantitative Analysis of Transcriptomes for Wild Type and Mutants including opaque2, PbfRNAi and PbfRNAi;o2 in Maize (Zea mays)
SRP072208The dual role of LSD1 and HDAC3 in STAT5-dependent transcription is determined by protein interactions, binding affinities, motifs and genomic positions [ChIP-seq]
SRP072209The dual role of LSD1 and HDAC3 in STAT5-dependent transcription is determined by protein interactions, binding affinities, motifs and genomic positions [RNA-seq]
SRP072214Converting adult pancreatic a-cells into ß-cells by targeting Dnmt1 and Arx
SRP072216Tuning water use efficiency and drought tolerance in wheat using ABA receptors
SRP072217Arabidopsis Messenger RNA N6-methyladenosine Demethylation Regulates Plant Development
SRP072218RNA-seq of microalga Dunaliella tertiolecta determine growth-switch genes in response to higher light intensity
SRP072221Gene expression analysis between rainbow trout strains with different susceptibility to enteritis when reared on plant-based diets
SRP072222RNA-seq analysis of transcriptomes at 1 day after sexual induction in Fusarium graminearum strains
SRP072226Widespread natural variation of DNA methylation within angiosperms
SRP072227Germline loss of PKM2 promotes metabolic distress and hepatocellular carcinoma
SRP072231Finding new proteins encoded by long non-coding RNAs in human cells
SRP072232cis regulated role of lncRNA in transcriptional or developmental process (ChIRP-Seq)
SRP072235Genome wide mapping of NR4A binding reveals cooperativity with ETS factors to promote epigenetic activation of distal enhancers in acute myeloid leukemia cells [ChIP-Seq]
SRP072236Cytosolic acetyl-CoA promotes histone acetylation predominantly at H3K27 in Arabidopsis
SRP072241Stress-induced accumulation of DNA N6-Methyladenine in prefrontal cortex
SRP072242Idiopathic pulmonary fibrosis bronchoalveolar lavage cells RNA-seq indicates macrophage expression of pro-inflammatory M1/M2 activation concomitant with radical species metabolism inhibition
SRP072243Liz transcription is required for evicting H3K27me3 marks at the Gpr1/Zdbf2 locus through the deposition of DNA methylation marks.
SRP072244mRNA sequence data from anterior ovarioles of w1118 virgin females of Drosophila melanogaster
SRP072245Hypothalamic transcriptome of male mice on high fat diet, from 99 strains
SRP072248The transcriptome and chromatin accessbility landscape of mammalian germline
SRP072249Targets of FRUITFULL in the pistil/silique [ChIP-Seq]
SRP072256Bach2 keeps homeostasis in lung by regulating inflammatory response and maintaining function of alveolar macrophage.
SRP072259Lactobacillus paracasei Genome sequencing
SRP072260A genome-wide screen identifies competitive growth advantage for human epidermal stem cells with activated YAP
SRP072261Dynamic enhancer landscape in postmitotic motor neurons
SRP072271PAtCh-Cap: input strategy for improving analysis of ChIP-exo data sets and beyond
SRP072272Input Strategy for Improving Analysis of ChIP-exo Data and Beyond [RNA-Seq]
SRP072273Whole genome DNA methylation profile of sperm cells in mammalian species
SRP072274Nucleosome fragility is associated with future transcriptional response to developmental cues and stress in C. elegans
SRP072276Allele-specific binding analysis of rs242561 by NRF2 ChIP tagmentation sequencing
SRP072281The mutual effect of Staphylococcus epidermidis and Staphylococcus aureus in dual species biofilms as revealed by RNA-Seq
SRP072282Candidate genes and pathways downstream of PAX8 involved in ovarian high-grade serous carcinoma
SRP072286High throughput characterization of the m6A demethylase FTO by CLIP and RNAseq
SRP072288Combined RNA-seq and ChIP-seq Identifies Gene Targets for Transcriptional Regulation in Vasopressin-Sensitive Collecting Duct Cells [RNA-seq]
SRP072289Dynamics of lineage commitment revealed by single-cell transcriptomics of differentiating embryonic stem cells
SRP072290Role of H3.3 residues in chromatin assembly and cell fate at the maternal-to-embryo transition
SRP072291Combined RNA-seq and Polr2a ChIP-seq Identifies Gene Targets for Transcriptional Regulation in Vasopressin-Sensitive Collecting Duct Cells
SRP072292Next Generation Sequencing Facilitates Quantitative Analysis of Wild Type and dek35 mutant Transcriptomes
SRP072295De novo Assembly of a Thai Genome
SRP072298Analysis of gene expression during the early stages of zebrafish heart valve development
SRP072300Arabidopsis SAURs Are Critical for Differential Light Regulation of the Development of Various Organs
SRP072302Next generation sequencing facilitates quantitative analysis of changes in mRNA after knock-down of putative master regulators of the breast cancer metastasis transcriptome.
SRP072321Identification of mRNA bound by TRIM25 binding in triple negative breast cancer
SRP072322Organic Nitrogen Source is Critical for Welan Production in Sphingomonas sp. ATCC 31555
SRP072323Genome-wide maps of TRIM25 binding sites in triple negative breast cancer cell
SRP072324Landscape of TOP2A-mediated DNA cleavage across the human genome
SRP072326Time-resolved dual RNA-seq reveals extensive rewiring of lung epithelial and pneumococcal transcriptomes during early infection
SRP072327Anchoring of Heterochromatin to the Nuclear Lamina Reinforces Dosage Compensation-Mediated Gene Repression
SRP072343Memory CD8+ T cells require stress-levels of acetate for optimal function
SRP072351EPOP Functionally Links Elongin and Polycomb in Pluripotent Stem Cells
SRP072352Toxoplasma gondii remodels the cis-regulatory landscape of infected human host cells [RNA-seq]
SRP072353Toxoplasma gondii remodels the cis-regulatory landscape of infected human host cells [ATAC-seq]
SRP072354Toxoplasma gondii remodels the cis-regulatory landscape of infected human host cells [HELP-tagging]
SRP072355Toxoplasma gondii remodels the cis-regulatory landscape of infected human host cells [HELP-GT]
SRP072357DNA Methylation profile in hypothalamus for mouse offspring with maternal high fat (HF), low protein (LP) and control (CO) diets
SRP072363Ubiquitination of Stalled Ribosome Triggers Ribosome-associated Quality Control [SET1]
SRP072364Oryza sativa Raw sequence reads
SRP072365iPSCs Reveal Protective Modifiers of the BMPR2 mutation in Pulmonary Arterial Hypertension
SRP072366High conservation in transcriptomic and proteomic response of white sturgeon to equipotent concentrations of 2,3,7,8-TCDD, PCB 77, and benzo[a]pyrene
SRP072369Ribosome footprinting of fly heads
SRP072380Transcriptome of GFP-ZFP36L1 expressing and WT FO B cells
SRP072383Transcriptome of Zfp36l1-deficient MZ B cells, WT MZ B cells and WT FO B cells.
SRP072394Tigriopus californicus Raw sequence reads
SRP072406Gossypium hirsutum Genome sequencing
SRP072417NextGen Consortium: GENESiPS Study: Identifying the Gene Networks of Insulin Resistance
SRP072420Arid3a is required for mammalian placenta development
SRP072421Loss of CREBBP results in H3K27ac loss at enhancers in mouse lymphoma cells
SRP072422Loss of CREBBP results in H3K27ac loss at enhancers in lymphoma cells
SRP072432Changes in Bacillus anthracis CodY regulation under host-specific environmental factor deprived conditions
SRP072447Landscape of histone modifications in a sponge reveals the origin of animal cis-regulatory complexity
SRP072449End Sequence Analysis ToolKit (ESAT) expands the extractable information from single cell RNA-Seq data
SRP072450RISC-mediated control of selected chromatin regulators stabilizes ground state pluripotency of mouse embryonic stem cells (TRAP)
SRP072452RISC-mediated control of selected chromatin regulators stabilizes ground state pluripotency of mouse embryonic stem cells (miRNA-Seq)
SRP072454Mapping interactions for the TNIP2 hub protein
SRP072455ChIP-sequencing of prostate cancer cells
SRP072456Study of the impact of copper levels in bovine blood on transcriptional profile
SRP072457Partial loss of psychiatric risk gene Mir137 in mice causes repetitive behavior and impairs sociability and learning via increased Pde10a
SRP072458TCF4 regulatory gene networks in developing dorsal telencephalon
SRP072459Regulation of poly(A) tail and translation during the somatic cell cycle
SRP072463Transcriptome sequencing reveals aberrant alternative splicing in Huntington''s disease
SRP072468RNA-seq analysis of testis transcripts from Wt and Trf2-/- mice [RNA-seq]
SRP072469TRF2 is recruited to the pre-initiation complex as a testis-specific subunit of TFIIA/ ALF to promote haploid cell gene expression [ChIP-seq]
SRP072470Cas9 target DNA specificity in vitro and in vivo (S. cerevisiae)
SRP072473Bos taurus Raw sequence reads
SRP072492RNA-sequencing of human pancreatic adenocarcinoma cancer tissues
SRP072493RNA sequencing of human pancreatic cancer cell lines
SRP072494Transcriptional changes induced by bevacizumab combination therapy in responding and non-responding recurrent glioblastoma patients
SRP072496Zea mays subsp. mays Transcriptome or Gene expression
SRP072497Comparison of gene expression of memory B cells subpopulations
SRP072498The molecular response of the white-rot fungus Dichomitus squalens to wood and non-woody biomass as examined by transcriptome and exoproteome analyses
SRP072499Transcriptomic responses to Deepwater Horizon oil in mahi-mahi (Coryphaena hippurus) embryos reveals time and oil-dependent linkages between molecular initiating events and developmental toxicity
SRP072500Comparison of crossbred and purebred cattle by bioinformatics analysis of differentially expressed transcripts
SRP072503Bisulfite-Seq and RNA-seq profiling of Arabidopsis aneuploids
SRP072505Loss of CREBBP results in gene expression represssion in mouse lymphoma cells
SRP072506Loss of CREBBP results in gene expression repression in lymphoma cells
SRP072507A mechanism of resistance to gefitinib mediated by cellular reprogramming and the acquisition of an FGF2-FGFR1 autocrine growth loop
SRP072513miRNA expression profiles of early lactation and early involution in dairy goat mammary gland tissues
SRP072515The Forkhead box transcription factor FOXM1 is required for the maintenance of cell proliferation and protection against oxidative stress in human embryonic stem cells
SRP072516Circadian Epigenomic Control of Skeletal Muscle Fuel Metabolism by HDAC3
SRP072519The effect of niclosamide on the growth and progression of endometriosis in an experimental mouse model
SRP072523ISL1 and JMJD3 synergistically control cardiac differentiation of embryonic stem cells (ChIP-Seq)
SRP072524ISL1 and JMJD3 synergistically control cardiac differentiation of embryonic stem cells (RNA-Seq)
SRP072526USP15 regulates type I interferon response in vivo and is required for pathogenesis of microbial and autoimmune neuroinflammation
SRP072527Saccharomyces cerevisiae Variation
SRP072553Lactobacillus rossiae DSM 15814 Transcriptome or Gene expression
SRP072554Unique cell-type specific patterns of DNA methylation in the root meristem (RNA-seq)
SRP072555Unique cell-type specific patterns of DNA methylation in the root meristem (MethylC-seq)
SRP072556Exploring the occupancy and interaction with FXR2, STAT1/3 and H3K4me3 at genomic level of FXR1 in H358 and AGS cell line by ChIP-seq
SRP072559Populus trichocarpa DNase I hypersensitivity
SRP072562Chromatin interaction map of promoters of a human lymphoblastoid cell line using capture in situ Hi-C
SRP072563Transcriptome dynamics during seed development in chickpea (JGK3)
SRP072564Transcriptome dynamics during seed development in chickpea (Himchana)
SRP072565RNA-Seq analysis of the pancreatic islets of beta cell specific adult Nkx2.2 mutant mice
SRP072566RNA-Seq analysis of NKX2.2 knockdown in human pancreatic islets
SRP072567microRNA profiling in normal and hyperplastic human and murine parathyroid glands
SRP072570RNA-seq analysis of in vivo- and in vitro-produced mouse oocytes
SRP072571RNA-seq of Odora cells exposed to zinc gluconate
SRP072572Epigenetic Profile in RBPJ Maintains Brain Tumor Initiating Cells through CDK9-mediated Transcriptional Elongation
SRP072573RNA-seq Profiles in RBPJ Maintains Brain Tumor Initiating Cells through CDK9-mediated Transcriptional Elongation
SRP072574Enhancer and transcriptomic changes in skeletal muscles in response to physical exercise
SRP072577Requirement for flap endonuclease 1 (FEN1) to maintain genomic stability and transcriptional gene silencing in Arabidopsis
SRP072659Identification of genes involved in metabolism and signaling of abscisic acid and gibberellins during Epimedium pseudowushanense B.L.Guo seed morphophysiological dormancy
SRP072660Distinct Combinatorial Events Generated by ECM Degradation Dictate Cell Behavior
SRP072661PAHs contaminated soils Raw sequence reads
SRP072663Syntrophic interactions within the multi-species exoelectrogenic biofilm community in bio-electrochemical systems
SRP072668Demystifying broadcast coral spawning in Acropora digitifera
SRP072669Expression profile of TRAMP-C1 cell line with PAX8-NFE2L2 overexpression
SRP072670High-throughput sequencing reveals change of microRNA expression caused by allopolyploidization in Cucumis
SRP072673Differential gene expression in intestinal mouse crypts after loss of KLF5
SRP072675Next generation sequencing facilitates quantitative analysis of PC9 and MTAC-P (EGFR-TKI resistant cell line derived from PC9)
SRP072676Next generation sequencing facilitates quantitative analysis of MTAC-P (EGFR-TKI resistant cell line derived from PC9) with and without BCAT1 knockdown.
SRP072680Populus trichocarpa Transcriptome or Gene expression
SRP072681DNA methylation is required for chromatin binding by Mbd2 and Mbd3 in ES cells (ChIP-Seq, meDIP-seq and hmDIP-seq)
SRP072683Postnatal Development is Associated with Genome-scale Changes in DNA Methylation in Mouse Liver
SRP072684Programs for the persistence, vigilance and control of human CD8+ lung-resident memory T cells
SRP072685Full-length autonomous transposable elements are preferentially targeted by expression-dependent forms of RNA-directed DNA methylation
SRP072686Analysis of HER2 genomic binding in breast cancer cells identifies a global role in direct gene regulation [RNA-Seq]
SRP072687HEK293 Heat-shock experiment
SRP072689Comparing the targets of distinct RNA Directed DNA Methylation mechanisms in Arabidopsis thaliana
SRP072690Transcriptional profiling of JEG3 cells with HLA-G ablation via deletion of Enhancer L
SRP072692Amnion as a surrogate tissue reporter of the effects of maternal preeclampsia on the fetus [Help-tagging]
SRP072693Amnion as a surrogate tissue reporter of the effects of maternal preeclampsia on the fetus [RNA-Seq]
SRP072694Genome-wide assessment of Nkx2.2 binding sites in MIN6 pancreatic beta cell line
SRP072696Mapping Gene Expression in Excitatory Neurons During Hippocampal Late-Phase Long-term Potentiation
SRP072697BMP (Bone morphogenetic protein) signaling network regulates mesenchymal stem cell lineage commitment during tooth development
SRP072698RNA sequencing for identifying downstream targets of miR25/93
SRP072699small RNA sequencing for identifying hypoxic responsive miRNAs
SRP072700Fractionation iCLIP detects persistent SR protein binding to conserved, retained introns in chromatin, nucleoplasm and cytoplasm
SRP072704Cripto is essential to capture mouse epiblast stem cell and human embryonic stem cell pluripotency
SRP072707Analysis of glucocorticoid receptor (NR3C1), NFkb (p65 subunit), and RNA polymerase 2 (RNAP2) binding in Beas-2B airway epithelial cells
SRP072710A conserved abundant cytoplasmic long noncoding RNA modulates repression of mRNAs by Pumilio proteins in human cells
SRP072715Transcriptomic profilling of sweet basil (Ocimum basilicum) downy mildew (Peronospora belbahrii) infection
SRP072718Tibet Environment Metagenome
SRP072727Mangifera indica isolate:CISH Block II | cultivar:Chausa Transcriptome or Gene expression
SRP072732Microglia development follows a stepwise program to regulate brain homeostasis - RNA seq
SRP072733Microglia development follows a stepwise program to regulate brain homeostasis - ChIP-seq
SRP072734Microglia development follows a stepwise program to regulate brain homeostasis - Single Cell RNA-seq
SRP072735Epigenetic Plasticity Drives Adipogenic and Osteogenic Differentiation of Marrow-Derived Mesenchymal Stem Cells (ChIP-seq)
SRP072737Epigenetic Plasticity Drives Adipogenic and Osteogenic Differentiation of Marrow-Derived Mesenchymal Stem Cells (RNA-seq)
SRP072742Transcriptome analysis of Shank2 mutant mice
SRP072746Localization of RNAPII and 3’ end formation factor CstF subunits on C. elegans genes and operons [RNA-seq]
SRP072747RNA-seq of Nothobranchius furzeri (Nfu) brain after miR29 knock-down
SRP072748Genome-wide map of HIRA binding sites in the mouse embryonic heart at E12.5
SRP072749Localization of RNAPII and 3’ end formation factor CstF subunits on C. elegans genes and operons [ChIP-seq]
SRP072753ARGs in sediments and animal wastes of Tibet environment
SRP072754Transcriptome and analysis of Wdr70 deletion by next-generation sequencing
SRP072755CRIG identifies a novel population of highly phagocytic peritoneal macrophages associated with disease severity in patients with cirrhosis and ascites
SRP072758ZMYND8 co-localizes with NuRD on target genes and regulates recruitment of GATAD2A/NuRD to sites of DNA damage [ChIP-seq]
SRP072759ZMYND8 co-localizes with NuRD on target genes and regulates recruitment of GATAD2A/NuRD to sites of DNA damage [RNA-seq]
SRP072765Methylome analysis of colorectal cancer cell line DNA (HCT116) and colorectal cancer patient derived xenografts (PDXs) using MeDIP-seq and cfMeDIP-seq
SRP072768shRNA cassette sequencing from disomic and trisomic fibroblasts cultured in the presence of shRNA kinome library for 14 days
SRP072769RNAseq from disomic and trisomic fibroblasts and lymphoblastoids
SRP072772Analysis of Early-scnRNAs of Tetrahymena
SRP072773RNA-Seq Quantification of Xenobiotic Processing Genes in Various Sections of the Intestine in Comparison to the Liver of Male Mice
SRP072774Differential regulation of meristem size, morphology and organization by the ERECTA, CLAVATA and class III HD-ZIP pathways
SRP072777Babesia microti Genome sequencing and assembly
SRP072786Transcriptome analysis of apoplastic reactive oxygen species (ROS) signaling and dissection of the roles of WRKY25, WRKY33 and WRKY75 in the transcriptional reprogramming triggered by apoplastic ROS
SRP072787Transcriptome analysis of estradiol-inducible overexpression of transcription factor WRKY75 in Arabidopsis thaliana
SRP072791RNA expression analysis of neuroblastoma cell lines treated with epigenetic drugs
SRP072792Camellia sinensis Raw sequence reads
SRP072802Next Generation Sequencing Facilitates Quantitative Analysis of germ cell RA signaling mutant and control THY1+ spermatogonia Transcriptomes
SRP072804MYC dependent mRNA translation shapes gene expression and cell biology
SRP072805Identification of microRNAs with the potential role in progression of thioacetamide-induced liver fibrosis in mouse
SRP072822In silico lineage tracing through single cell transcriptomes identifies a neural stem cell population in planarians
SRP072823RNA-sequencing of two the B-ALL cell lines, REH and 697
SRP072824H3K27ac ChIP-Seq in REH and 697
SRP072825RNA-sequencing of B-ALL cell lines, REH treated with LNA GapmeRs against four lncRNAs
SRP072826Integrative analysis of 3D nucleome and chromatin accessibility reveals a chromatin barrier established for T-lineage commitment during early T cell development [ChIP-Seq]
SRP072831Genome-wide map of DNA 5-Hydroxymethylcytosine in cardiomyocytes isolated from E14.5, Neonatal, Adult, pressure-overload (TAC), sh-control and sh-TET2 isolated cardiomyocytes
SRP072832Transcriptome analysis of NKG2CBright compared to NKG2CNeg from multigravida decidua samples
SRP072834Imprinted DNA methylation reconstituted at a non-imprinted locus
SRP072835The MLL-AF9 and MLL-AF4 oncofusion proteins bind a distinct enhancer repertoire and target the RUNX1 program in MLLr AML
SRP072836Determine the function of lncBATE10 in brown and white adipocyte culture
SRP072837Therapeutic targeting of GCB- and ABC-DLBCLs by rationally designed BCL6 inhibitors
SRP072838QKI's function in neural stem cells (NSCs) and pre-malignant NSCs (PM-NSCs) and transcriptome of Nestin-CreERT2 PtenLoxP/LoxP p53LoxP/LoxP QKILoxP/LoxP (QPP) mouse glioblastoma
SRP072839Orientation-specific RAG activity in chromosomal loop domain contribute to Tcrd V(D)J recombination during T cell development
SRP072840Function of deubiquitinase USP21 in mouse embryonic stem cell [ChIP-Seq]
SRP072841Epigenomic remodeling of the PAX8 cistrome in high grade serous ovarian cancer [ChIP-Seq]
SRP072843A switch from neuronal network development to maintenance during postnatal development of rat prefrontal cortex
SRP072844Control of Neuronal Synapse Specification by a Highly Dedicated Alternative Splicing program
SRP072845The transcription factor Zeb2 regulates development of conventional and plasmacytoid DCs by repressing Id2
SRP072846Uveal melanoma cells are resistant to EZH2 inhibition regardless of BAP1 status
SRP072847A novel synthetic jumonji H3K27 demethylase inhibitor GSK-J4 exert immunosuppressive activities
SRP072848Gene expression analysis of serotonin transporter knock-out and wildtype rats during rat postnatal prefrontal cortex development
SRP072849MerR and ChrR mediate blue light induced photo-oxidative stress response at the transcriptional level in Vibrio cholerae
SRP072850The PSI-U1 snRNP interaction regulates male mating behavior in Drosophila
SRP072852Zika virus Genome sequencing and assembly
SRP072853Ancestral (bi-)polarization control module in free-living and obligate intracellular bacteria
SRP072858Homo sapiens Raw sequence reads
SRP072864RNA-sequencing time course of Human Intestinal Epithelial Cells (HIECs) following knockdown of miR-30bcd using complementary locked nucleic acids
SRP072865Characterization and transplantation of enteric neural crest cells from human induced pluripotent stem cells
SRP072868Examination of gene expression in cerebellum of mouse strains B6J, B6J-nmf205-/-, B6J-Gcn2-/- and B6J-nmf205-/-;Gcn2-/-.
SRP072871A Preclinical Model of Human Acute Myeloid Leukemia with an Autologous Immune System for Studying Mechanisms of Tumorigenesis and Immunotherapy
SRP072872The landscape of accessible chromatin in mammalian pre-implantation embryos (ChIP -Seq)
SRP072875Single-nucleus RNA-seq on undifferentiated human KD3 myoblasts and differentiated myotubes and mononucleated cells.
SRP072876ATAC-Seq to investigate the spatial choreography of the accessible genome
SRP072877Mesp1Cre;Hira-/fl and Mesp1Cre;Hira+/fl in heart at E11.5 and E12.5
SRP072878Conserved local hypomethylation control during the bacterial cell cycle and by superimposed environmental cues
SRP072879Auxin signaling in the epidermis regulates stem growth via interactions with the brassinosteroid pathway
SRP0728804ß-Hydroxywithanolide E Modulates Alternative Splicing of Apoptotic Genes in Human Hepatocellular Carcinoma Huh-7 Cells
SRP072881Gene expression profiling during cardiac maturation, hypertrophy and after KD of TET2
SRP072885Next Generation Sequencing to determine MneHV7 Transcriptome in pigtailed macaque salivary gland tissues
SRP072887Chromatin accessibility maps of human primary pancreatic cell types
SRP072888Topoisomerase 1 Regulates Gene Expression in Neurons through Cleavage Complex-Dependent and -Independent Mechanisms
SRP072889UtpA and UtpB chaperone nascent pre-ribosomal RNA and the U3 snoRNP to initiate eukaryotic ribosome assembly
SRP072890Next-generation sequencing analysis of transcriptom in gemcitabine resistant pancreatic cancer cells
SRP072894THZ1 targeting CDK7 suppresses STAT transcriptional activity and sensitizes T-cell lymphomas to BCL2 inhibitors
SRP072895Rebalancing gene haploinsufficiency in vivo by targeting chromatin
SRP072896Characterization of Staphylococcus epidermidis biofilm-released cells (BRC) transcriptome upon interaction with whole human blood and its cellular and soluble components
SRP072897Regulation of Gene Expression During Electron Acceptor Limitation and Bacterial Nanowire Formation in Shewanella oneidensis MR-1
SRP072917ATXN7L3 And ENY2 Coordinate Activity Of Multiple H2B Deubiquitinases Important For Cellular Proliferation And Tumor Growth [ChIP-Seq]
SRP072918ATXN7L3 And ENY2 Coordinate Activity Of Multiple H2B Deubiquitinases Important For Cellular Proliferation And Tumor Growth [RNA-Seq]
SRP072919Merkel cell polyomavirus small T antigen promotes pro-glycolytic metabolic perturbations required for transformation
SRP072920Peripheral Blood Mononuclear Cells (PBMC) Gene Expression-Based Biomarkers in Juvenile Idiopathic Arthritis (JIA)
SRP072922A tissue checkpoint regulates type 2 immunity
SRP072928Transcriptome Profile of CYC2 K.O. and WT during meiosis in Tetrahymena thermophila
SRP072929CXXC finger protein 1 is critical for T cell intrathymic development through regulating H3K4 trimethylation [RNA-Seq]
SRP072930CXXC finger protein 1 is critical for T cell intrathymic development through regulating H3K4 trimethylation [ChIP-Seq]
SRP072935Integrated RNA-seq and sRNA-seq analysis reveals miRNA effects on secondary metabolism in Solanum tuberosum L [RNA-seq]
SRP072936Integrated RNA-seq and sRNA-seq analysis reveals miRNA effects on secondary metabolism in Solanum tuberosum L [miRNA-seq]
SRP072941The myelin protein PMP2 is regulated by SOX10 and drives melanoma cell invasion
SRP072942Genome-wide DNA methylation profile of developing deciduous tooth germ in miniature pigs
SRP072944MiR-196b is epigenetically silenced during the pre-malignant stage of lung carcinogenesis
SRP072945Protospacer integration into plasmid DNA by Cas1–Cas2
SRP072951Transcriptome changes in cultured mouse cortical neurons infected with lentivirus expressing shMeCP2
SRP072952A genetic interaction between RAP1 and telomerase reveals an unanticipated role for RAP1 in telomere protection
SRP072954XRN2 Autoregulation and Control of Polycistronic Gene Expression in Caenorhabditis elegans
SRP072957FOXN3 regulates hepatic glucose utilization
SRP072973Single-cell Hi-C reveals unique chromatin reorganization at oocyte-to-zygote transition
SRP072979Specific and novel human microRNAs are regulated as response to fungal infection
SRP072980Stochastic Principles Governing Alternative Splicing of RNA
SRP072981MS2-affinity purification coupled with RNA sequencing (MAPS) reveals GcvB sRNA targetome.
SRP072982MS2-affinity purification coupled with RNA sequencing (MAPS) reveals RprA sRNA targetome.
SRP072988Single-Cell Analysis Uncovers Clonal Acinar Cell Heterogeneity in the Adult Pancreas
SRP072989Next Generation Sequencing Facilitates Quantitative Analysis of Wild Type APC and OX40L-TG APC induced T helper 17 cell Transcriptomes [RNA-seq]
SRP072991Targeted deletion of an Nr4a1­ associated enhancer ablates Ly6Clow monocytes while protecting pleiotropic gene function in macrophages [ChIP-seq]
SRP072993Targeted deletion of an Nr4a1­ associated enhancer ablates Ly6Clow monocytes while protecting pleiotropic gene function in macrophages [RNA-seq]
SRP072994Enhanced CLIP (eCLIP) enables robust and scalable transcriptome-wide discovery and characterization of RNA binding protein binding sites [eCLIP - HepG2/K562 cells]
SRP072996RNA-seq of Lmnb1-/- and Lmnb1+/- olfactory lineages
SRP072999Histone deacetylase inhibition enhances antimicrobial peptide but not inflammatory cytokine expression upon bacterial challenge
SRP073000Pteroceltis tatarinowii Raw sequence reads
SRP073003Gene expression analysis (RNA-seq) of Arabidopsis thaliana roots in wild type and trm4b-1 mutants under control and oxidative stress conditions
SRP073005Transcriptome-wide RNA 5-methylcytosine methylation in shoots of Arabidopsis thaliana
SRP073006Transcriptome-wide RNA 5-methylcytosine methylation in siliques of Arabidopsis thaliana
SRP073007Transcriptome-wide RNA 5-methylcytosine methylation in roots of Arabidopsis thaliana
SRP073021POWERDRESS interacts with HISTONE DEACETYLASE 9 to promote aging in Arabidopsis
SRP073022Whole transcriptome sequencing identifies increased CXCR2 expression in PNH granulocytes
SRP073023Knockout of miR-221 and miR-222 reveals overlapping and specific function between paralogous miRNAs
SRP073025The SET Domain Proteins SUVH2 and SUVH9 Are Required for Pol V Occupancy at RNA-Directed DNA Methylation Loci
SRP073027MicroRNA Expression Profiling in Porcine Muscle Identifies a Role for miR-27 in Mediating MYH7 Expression
SRP073028De novo Assembly and Characterization of Swertia japonica Transcriptome for the Identification of Candidate Genes Involved in the Biosynthesis of Therapeutic Metabolites
SRP073029Identification of H3 Lysine 4 monomethylation Associated Proteins at Mammalian Enhancers
SRP073032Genome-wide distribution of UHRF2 and ZNF618 in 293T cells.
SRP073033Joint-specific DNA transcriptome signatures in rheumatoid arthritis [RNA-seq]
SRP073034Genome-wide mining for microRNAs and their targets in a pre-model tree for Betula luminifera using high-throughput sequencing and degradome analyses
SRP073036Genome-wide binding of condensin II and TFIIIC upon respective knockdown of a TFIIIC and condensin II subunit
SRP073037Transcriptome analysis of condensin II knockdown cells
SRP073038Comparative genomic, transcriptomic and secretomic profilings of Penicillium oxalicum HP7-1 and its cellulase and xylanase hyper-producing mutant EU2106, and identification of two novel regulators for cellulase and xylanase gene expression
SRP073040Integrin signaling regulates YAP/TAZ to control skin homeostasis
SRP073041TBX18 regulates the differentiation of periductal smooth muscle stroma and the maintenance of epithelial integrity in the prostate
SRP073042Gene expression profiling of retrovirus PDGFB-induced glioma
SRP073043Genome-wide maps in PDGFB-induced glioma
SRP073044Generation of Brain Region-specific Organoids using a Miniaturized Spinning Bioreactor and Modelling ZIKV Exposure
SRP073048Next Generation Sequencing Facilitates Quantitative Analysis of Wild Type and dek10 mutant Transcriptomes
SRP073049Differential expression of Hdc-GFPhi HSPC VS Hdc-GFPlo HSPC hematopoetic stem and progenitor cells from mouse bone marrow
SRP073050Transcriptome Profiling of Human Primary Monocytes
SRP073051DNA methylation landscape of fat deposit and fatty acid composition variation in obese and lean pigs
SRP073055Oryza sativa cultivar:Nipponbare Transcriptome or Gene expression
SRP073061GEO accession GSE80098 is currently private and is scheduled to be released on Jun 01, 2016.
SRP073062Etv5 target genes in AT2 cells and mouse lung
SRP073063Etv target genes in mouse alveolar type II cells
SRP073065RNA-seq analyses of JMJD3c-MYOD1-induced myogenic cells and human skeletal myotubes
SRP073066ChIP-seq analyses of H3K27me3 and H3K4me3 in JMJD3c-hESCs
SRP073081Transcriptome analysis of virus-specific H2-Db-GP33-41+CD8+ T cells from WT or PSGL-1 KO mouse spleens at day 9 post LCMV Cl 13 infection
SRP073086Mice carrying a human GLUD2 gene recapitulate aspects of human transcriptome and metabolome development
SRP073087Expression profiling Hawaiian Drosophila species, tissues, and sexes
SRP073093Comparative transcriptomic analysis of Gardnerella vaginalis biofilms versus planktonic cultures using RNA-seq
SRP073096Evidence for two protein coding transcripts at the Igf2as locus
SRP073097Topoisomerase 1 inhibition suppresses inflammatory genes and protects from death by inflammation (RNA-Seq)
SRP073098Topoisomerase 1 inhibition suppresses inflammatory genes and protects from death by inflammation (ChIP-Seq)
SRP073099Tet-mediated DNA hydroxymethylation regulates retinal neurogenesis in zebrafish via cell-extrinsic signaling pathways
SRP073102Whole transcriptome splicing analysis in isogenic lung epithelial and adenocarcinoma cell lines with or without a recurrent splicing factor mutation, U2AF1 (S34F)
SRP073103HLA peptides derived from tumor antigens induced by inhibition of DNA methylation for development of drug-facilitated immunotherapy
SRP073104A threshold level of NFATc1 activity is critical for thymocyte differentiation and to prevent leukemia development
SRP073105CAGE sequences from three developmental states in the microcrustacean Daphnia pulex.
SRP073108Synergistic model of chromatin predicts Dnase-I accessibility
SRP073109The histone H3K9 demethylase KDM3A promotes anoikis through transcriptional activation of pro-apoptotic genes BNIP3 and BNIP3L
SRP073110Enhancer invasion shapes MYCN dependent transcriptional amplification in neuroblastoma [ChIP-seq]
SRP073111Enhancer invasion shapes MYCN dependent transcriptional amplification in neuroblastoma [ATAC-seq]
SRP073112Enhancer invasion shapes MYCN dependent transcriptional amplification in neuroblastoma [RNA-seq]
SRP073113Enhancer invasion shapes MYCN dependent transcriptional amplification in neuroblastoma [ChIP_RX]
SRP073115Post-transcriptional regulation by the let-7 microRNA and the TRIM-NHL protein LIN41 [Ribosome footprinting]
SRP073116A coding sequence-embedded principle governs translational reading frame fidelity
SRP073117Post-transcriptional regulation by the let-7 microRNA and the TRIM-NHL protein LIN41 [RNA-seq]
SRP073118Role of transcriptional coregulator GRIP1 in control of macrophage polarization and metabolic homeostasis
SRP073119Genetic identification of an adipocyte expressed anti-diabetic target in mice selected for resistance to diet-induced obesity
SRP073121Two mutually exclusive local chromatin states drive efficient V(D)J recombination
SRP073128Sundarbans estuarine ecosystem Metagenome
SRP073131sediment metagenome Raw sequence reads
SRP073139Anopheles gambiae, Anopheles coluzzii, Anopheles arabiensis Genome sequencing
SRP073157RNA Sequencing Data in differentiating mouse embryonic stem cells
SRP073158Global Mapping of Human RNA-RNA Interactions
SRP073163Next Generation Sequencing Compares Effects of microRNA-9 perturbation in control and SZ hiPSC NPCs
SRP073180RNA-Seq Analysis of Changes in Human Myometrial Tissue mRNA Expression Upon Labour Onset and Progression in Term Pregnancy
SRP073181Single cell sequencing of Dgcr8 knockout embryonic stem cells plus/minus miR-294 or let-7
SRP073183Analysis of Post-TBI Gene Expression Signature Reveals Tubulins, NFE2L2, NFkB, CD44, and S100A4 as Treatment Targets for Traumatic Brain Injury
SRP073184Inhibition of DNA methylation promotes breast tumor sensitivity to netrin-1 interference [MeDIP-Seq]
SRP073185Inhibition of DNA methylation promotes breast tumor sensitivity to netrin-1 interference [RNA-Seq]
SRP073186Chromatin environment, transcriptional regulation and splicing distinguish lncRNAs and mRNAs [Stability]
SRP073187Chromatin environment, transcriptional regulation and splicing distinguish lncRNAs and mRNAs [NucFrac]
SRP073188Murine mammary epithelial cell methylome and ATAC-seq analyses
SRP073189A TGFbeta-PRMT5-MEP50 Axis Regulates Cancer Cell Invasion through Histone H3 and H4 Arginine Methylation Coupled Transcriptional Activation and Repression
SRP073190Computationally designed, high specificity inhibitors delineate the roles of BCL2 family proteins in cancer
SRP073191RNA-seq study reveals unique transcriptome expression in systemic lupus erythematosus patients with distinct autoantibody profile
SRP073192Genome-wide analysis of tumor suppressive programs during p53-induced regression of Myc-driven lymphomas [ChIP-Seq]
SRP073193Genome-wide analysis of tumor suppressive programs during p53-induced regression of Myc-driven lymphomas [DNaseI-seq]
SRP073194Genome-wide analysis of tumor suppressive programs during p53-induced regression of Myc-driven lymphomas [RNA-Seq]
SRP073195ChIP-seq-based analysis of i) K27me3 promoter coverage and ii) enhancer elements in neuroblastoma cell lines
SRP073196Small RNA sequencing in mutant strains of C. elegans infected by the Orsay virus
SRP073197Analysis of gene expression patterns of Arabidopsis roots grown in methyl jasmonate (MeJA), cytokinin (CK), MeJA/CK- treated conditions
SRP073198Multilayered control of alternative splicing regulatory networks by transcription factors (SPAR-Seq)
SRP073200Multilayered control of alternative splicing regulatory networks by transcription factors (RNA-Seq)
SRP073201Multilayered control of alternative splicing regulatory networks by transcription factors (iCLIP-Seq)
SRP073202Multilayered control of alternative splicing regulatory networks by transcription factors (ChIP-Seq)
SRP073203Transcriptome of Ago2_KO mouse embryonic stem cells (mESCs) before and after XEN differentiation
SRP073204Small RNA profiling of WT E14, Ago2_KO and Ago1_KO mouse embryonic stem cells before and after XEN conversion and small RNA profiling after Immunoprecipitation of AGO1&2 proteins in WT E14, Ago1_KO and Ago2_KO mESCs.
SRP073205Expression data for sweet orange fruits in different development stages
SRP073206Transcriptome analysis in a radiosensitive and a radioresistant cell line after ionizing radiation
SRP073207Dynamic Landscape of Alternative Polyadenylation during Retinal Development
SRP073208A Reproducibility-Based Computational Framework Identifies An Inducible, Enhanced Antiviral Dendritic Cell State In HIV-1 Elite Controllers (scRNA-Seq)
SRP073209Genome-wide maps of acetylated histone 3 lysine 4 in human head and neck squamous cell carcinoma cells under normoxia and hypoxia
SRP073210The TfoX regulon of Vibrio cholerae
SRP073211Condensin II complex mediates interactions of histone gene loci
SRP073217Response to low-dose cortisol treatment in zebrafish embryos [larvae]
SRP073224Polycomb Ezh2 controls the fate of GABAergic neurons in the embryonic cerebellum
SRP073236Xenopus laevis Raw sequence reads
SRP073238Identification of warm-sensitive neuron markers using PhosphoTRAP
SRP073239Cell-specific gene expression profiling of warm-sensitive neurons
SRP073240The transcriptional activator GaaR of Aspergillus niger is required for release and utilization of D-galacturonic acid from pectin
SRP073241Comparative transcriptomics reveals the different gene expression pattern related to wilt disease resistance and susceptibility in biodiesel plants of Vernicia
SRP073242Smart-seq2 analysis of P17 FACS sorted retinal cells from the Tg(Chx10-EGFP/cre,-ALPP)2Clc or Vsx2-GFP transgenic line
SRP073243Sp7/Osterix is restricted to bone-forming vertebrates where it acts as a Dlx co-factor in osteoblast specification [ChIP-Seq 2]
SRP073244Genome-wide Localization of Mot1, Spt16, and Nucleosomes in mot1, spt16, and mot1 spt16 cells
SRP073245RNA-seq analysis reveals profound changes in transcript profiles between siCon- and siH19-transfected EVT cells
SRP073246Gemone-wide changes of epigenetic mark H3K27 trimethylation (H3K27me3) and AR in prostate cancer cells upon the treatment of EZH2 inhibitors [ChIP-seq]
SRP073247EZH2 inhibitor-mediated transcriptional profiling in prostate cancer cells [RNA-seq]
SRP073248The human olfactory transcriptome
SRP073249Next Generation Sequencing Facilitates Quantitative Analysis of Wild Type and dek33 mutant Transcriptomes
SRP073261Grainyhead-like 2 is essential for androgen receptor expression and activity in prostate cancer (ChIP-seq)
SRP073267Impact of RNA degradation on fusion detection by RNA-seq
SRP073268Precise mapping of the transcription start sites of human microRNAs using DROSHA knockout cells
SRP073272Cortisol-treated zebrafish embryos develop into pro-inflammatory adults with aberrant immune gene regulation [adults]
SRP073281RNA-sequencing of subcellular fractions in mouse embryonic stem cells
SRP073286Transcriptome analysis of H9 hESC derived cerebral organoids
SRP073289Active and inactive enhancers co-operate to exert localized and long-range control of gene regulation [ChIP-seq]
SRP073292Active and inactive enhancers co-operate to exert localized and long-range control of gene regulation [4C-seq]
SRP073293Active and inactive enhancers co-operate to exert localized and long-range control of gene regulation [ATAC-seq]
SRP073294Active and inactive enhancers co-operate to exert localized and long-range control of gene regulation [RNA-seq]
SRP073295Distinct gene expression profile of Xanthomonas retroflexus engaged in synergistic multispecies biofilm formation
SRP073296Identification of extracellular miRNA in archived serum samples by next-generation sequencing from RNA extracted using multiple methods
SRP073305Homo sapiens TCR repertoire of CD8 T lymphocytes against CMV-pp65 NLV and Flu-M1 GIL
SRP0733063D structures of individual mammalian genomes reveal principles of nuclear organization
SRP073307Evolutionary origin and functional divergence of stem cell homeobox genes in eutherian mammals
SRP073310Differential expression of Hdc-/- VS WT hematopoietic stem and progenitor cells (HSPC) from bone marrow.
SRP073313Next Generation Sequencing Facilitates Quantitative Analysis of Wild Type and Msx1-/- tooth mesenchyme Transcriptomes
SRP073314ChIP-seq of Lmnb1-/- and Lmnb1+/- olfactory lineages
SRP073317Effect of microgravity on HUVECs (Human Umbilical vein Endothelial cells) cells and its transcriptome analysis.
SRP073318mRNA expression of breast cancer cell lines across different densities [SCRB-Seq]
SRP073322Adaptation of Porphyromonas gingivalis to Streptococcus gordonii observed using time-coursed RNA-Seq
SRP073323Study of RepID/PHIP in DNA Replication inhitiation in Mammalian Cells
SRP073324The SUMO E3 ligase-like proteins PIAL1 and PIAL2 interact with MOM1 and form a novel complex required for transcriptional silencing [RNA-seq]
SRP073325The SUMO E3 ligase-like proteins PIAL1 and PIAL2 interact with MOM1 and form a novel complex required for transcriptional silencing [Bisulfite-seq]
SRP073326A comparative analysis of 5-azacytidine and zebularine induced DNA demethylation using whole-genome bisulfite sequencing
SRP073327PfAP2-I-GFP anti-GFP and anti-IgG ChIP-seq
SRP073328RNA Sequencing Facilitates Quantitative Analysis of Primary Microglia Transcriptomes II
SRP073331Aging-related virtually naïve memory T (TVNM) cells: a new stage in T cell response to persistent infections in humans
SRP073333Role of COP1 on MAP kinase transcriptional output in gastrointestinal stromal tumor
SRP073336Mouse models of 17q21.31 microdeletion and microduplication syndromes highlight the importance of Kansl1 for cognition.
SRP073337Role of COP1 on MAP kinase transcriptional output in melanoma
SRP073338Ptchd1 deficiency induces excitatory synaptic and cognitive dysfunctions in mouse.
SRP073343Brassica napus seed germination small RNA
SRP073362A multi-step transcriptional and chromatin cascade underlies motor neuron programming (transcription factor ChIP-seq)
SRP073363Effect of Mef2 knockdown in Drosophila fat body
SRP073366Transcriptomic response of Drosophila melanogaster pupae developed in hypergravity
SRP073368Assessing transcriptomes of mouse cumulus cells, mural granulosa cells, and cumulus-oocyte complexes
SRP073370LaminB1 DamID in undifferentiated mouse C2C12 myoblasts (ATCC, Lot 59501261) and differentiated C2C12 myotubes
SRP073371TCF7L1 ChIP-seq in H9 human embryonic stem cells
SRP073375Spatial proximity to fibroblasts impacts molecular features and therapeutic sensitivity of breast cancer cells influencing clinical outcomes
SRP073379Arabidopsis BIC1 inactivates CRY2 by suppressing the blue light-dependent cryptochrome dimerization
SRP073381Transcriptome analysis of 6 hours post fertilization mecp2-null versus wild type zebrafish embryos
SRP073382Transcriptome profiling of the human dorsal striatum in bipolar disorder
SRP073383Gata6 promotes hair follicle matrix progenitor cell renewal by genome maintenance via Edaradd/NF-?B
SRP073384Therapeutic targeting of GCB- and ABC-DLBCL by rationally designed BCL6 inhibitor
SRP073385MicroRNAs control mRNA fate by compartmentalizing mRNAs based on 3'UTR length
SRP073387Raw sequence reads
SRP073388RNA-seq during occlusion myopia induction and recovery
SRP073391Transcriptome and network analyses in Saccharomyces cerevisiae reveal that amphotericin B and lactoferrin synergy disrupt metal homeostasis and stress response
SRP073393PR isoform-specific ER and PR chromatin binding and gene expression observed in-vitro in breast cancer cells.
SRP073396Transcriptional regulatory dynamics drive coordinated metabolic and neural response to social challenge in mice. [RNA-Seq data set]
SRP073425Chloroplast Phylogenomics of Amaranthus
SRP073426Transcriptome profile of HepG2-expressing ATP7B-H1069Q (liver hepatocellular cells) exposed to JNK or p38 Inhibitor
SRP073430Two components of the RNA-directed DNA methylation pathway associate with MORC6 and silence loci targeted by MORC6 in Arabidopsis
SRP073433Cyclic AMP-responsive element-binding protein (CREB) is critical in autoimmunity by promoting Th17 but inhibiting Treg differentiation
SRP073434A splicing switch of TEAD4 regulates Hippo-YAP signaling pathway to inhibit tumor proliferation
SRP073435RNA sequencing of sheep infraspinatus muscle after tendon release and repair under concomitant nandrolone administration
SRP073438Identification of genes regulated by REST in developing hearts
SRP073442Pioneering function of Isl1 in the epigenetic control of cardiomyocyte cell fate [Baf60c_RNA-seq]
SRP073443Transcriptome Analysis of Tendon Derived Stem Cells (TDSCs) Isolated from WT and CFTR?F508 Mice
SRP073445Integrator complex subunit 12 is a key regulator of human protein synthesis pathways
SRP073446Gastric cancer RNA-seq
SRP073447Gastric cancer targeted RNA-seq
SRP073451Epigenetic features of differentiation-regulated replication origins
SRP073454Genome-wide alterations in DNA methylation identify Leprel2, Foxf1, Mmp25, Igfbp6 and Peg12 as disease-associated genes in murine Achilles tendinopathy 
SRP073455Transient RNA-DNA Hybrids Are Required for Efficient Double-Strand Break Repair
SRP073456Small RNA sequencing of human prostate cancer samples
SRP073459CDK12 regulates alternative last exon mRNA splicing and promotes invasion of a breast cancer cell line
SRP073460Global transcriptome analysis in the MYCN-amplified neuroblastoma cell line IMR5-75 upon inducible MYCN-knockdown
SRP073461Genomic deletion of malic enzyme 2 confers collateral lethality in pancreas cancer
SRP073471Dickeya dianthicola RNS04.9 Genome sequencing and assembly
SRP073476Small RNA profiling of WT E14, Ago2_KO and Ago2_KO-AGO1 mouse embryonic stem cells.
SRP073483small RNA-Seq showing transfer of bacterial outer membrane vesicle (OMV) sRNA to host airway epithelial cells
SRP073485Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation
SRP073486Study of expression changes during RPS4-mediated resistance in Arabidopsis using a temperature-inducible system which mirrors NLR activation
SRP073487Time course RNA-seq analysis of barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in defense phytohormone signaling-depleted Arabidopsis thaliana mutant.
SRP073488Genome-wide identification of H2A.Z-interacting proteins by bPPI-seq
SRP073492Identification of a novel PPARß/d / miR-21-3p axis in UV-induced skin inflammation [human miRNA-seq]
SRP073493Molecular Signatures Associated with ZIKV Exposure in Human Cortical Neural Progenitors
SRP073494Targeting evasion from Antiangiogenic therapy
SRP073495RNA-sequencing of mouse knockout models for Cnp, Plp1, and Ugt8 in the frontal cortex and cerebellum
SRP073498Transformation of mature adipocytes to liposarcoma in Ad/NICD mice
SRP073499miR-219 Cooperates with miR-338 in Myelination and Promotes Myelin Repair in the CNS
SRP073500Pervasive effects of aging on gene expression in wild wolves
SRP073501Complement protein C1q modulates macrophage molecular signaling and inflammatory responses during ingestion of atherogenic lipoproteins
SRP073503RNA-Seq analysis of E15.5 pancreas of both whole body Nkx2.2 mutant embryos and endocrine progenitor specific Nkx2.2 mutant embryos
SRP073506ChIP-seq-based analysis of differential K27me3 coverage in neuroblastoma cell lines treated with epigenetic drugs
SRP073509Quantitative Analysis of cortical transcriptomes through Next Generation Sequencing from wild-type mice, wild-type mice treated with IL1b, IL-1R8-/- mice and IL-1R8-/- mice treated with IL1b antagonist Anakinra
SRP073511Study of expression changes during RPS4-mediated resistance in Arabidopsis using a temperature-inducible system which mirrors NLR activation II
SRP073512Transcriptome analysis of E. coli REL4536 grown aerobically and anaerobically
SRP073517Grainyhead-like 2 is essential for androgen receptor expression and activity in prostate cancer (RNA-seq)
SRP073521Oryza sativa Genome sequencing
SRP073590Reciprocal regulation of cardiac chromatin by the chromatin structural proteins HMGB and CTCF