AccessionTitle or Alias
ERP118205Metagenomics
ERP118208Pooled CRISPR screening with high sensitivity using empirically designed sgRNAs
ERP118209Linc-GALMD1 regulates viral gene expression in the chicken
ERP118212Effects of long-term mineral fertilization on soil microbial functional community
ERP118213Genome of Dionaea muscipula
ERP118214Aldrovanda vesiculosa (whaterweel) genome
ERP118218Exploiting genomic differences between Listeria monocytogenes EGDe isolates reveals crucial roles for SigB and wall rhamnosylation in biofilm formation.
ERP118219Publicly available whole-genome sequencing data supports TB surveillance
ERP118220Transcriptome profiling of human urothelial carcinoma cell lines RT-112, VM-Cub-1, SW1710, UMUC3 and a benign urothelial control HBLAK engineered to stably express HDAC5 against their vector control
ERP118223Molecular taxonomy of the genus Cladostephus (Sphacelariales, Phaeophyceae)
ERP118226Notch2 Signaling Induces Trans-differentiation of Follicular to Marginal Zone B Cells
ERP118227Assessing Species-Time Relationships in water-filled treehole bacterial communities
ERP118231Agrenseq on Aegilops sharonensis
ERP118233Point mutations in topoisomerase I alter the mutation spectrum in E. coli and impact the emergence of drug resistance genotypes
ERP118235Agrenseq on Aegilops sharonensis
ERP118238Evolution towards human-specific Salmonella enterica accompanied the Eurasian Neolithization
ERP118240The DNA of things
ERP118242Draft genome of an isolate of Extensively-Drug Resistant (XDR) Mycobacterium tuberculosis from Eastern Nepal
ERP118243Reconstruction of complex rearrangement patterns causing the initiation of clear cell renal cell carcinoma.
ERP118244Algae-growth promoting methylobacteria
ERP118246Coat color variation in domestic yak
ERP118248An integrated approach to profile lung tumor endothelial cell heterogeneity across species and models and to identify angiogenic candidates
ERP118250Optimizing the genetic prediction of the eye and hair color for North Eurasian populations
ERP118251Avian pathogenic Escherichia coli (APEC) strain-dependent immunomodulation of respiratory granulocytes and mononuclear phagocytes in CSF1R-reporter transgenic chickens
ERP118252Shotgun sequencing of a Torymus bedeguaris larva (sample T1) inhabiting a rose bedeguar gall, for the purpose of studying associated microorganisms
ERP118255Identification and characterization of bacteria causing flacherie in mulberry silkworm, Bombyx mori L.
ERP118256Draft genome of an isolate of Extensively-Drug Resistant (XDR) Mycobacterium tuberculosis from Eastern Nepal
ERP118258Biodiversity of Capsicum annuum (Red chilli) Plant Growth Promoting Rhizobacteria Isolated from Different Agro-climatic Zones of Pakistan
ERP118262Steering root microbiomes of a commercial horticultural crop with plant-soil feedbacks
ERP118264Molecular characterization of bacterial fish pathogens
ERP118265Desulfovibrio sp.86 was isolated from consortium 86 obtained from chlordecone insecticide enrichment cultures
ERP118266Pooled CRISPRi screening of the cyanobacterium Synechocystis sp. PCC 6803 for enhanced growth, tolerance, and chemical production
ERP118267Animal experiment: the effect of fecal microbiota from preeclampsia patients on the pregnant mice
ERP118268A case-control study to compare the fecal microbiome of preeclampsia and normotensive pregnant women
ERP118269A case-control study to compare the placental microbiome of preeclampsia and normotensive pregnant women
ERP118271Soybean Aphid Biotype 1 Genome: Insights into invasive biology and adaptive evolution of a major agricultural pest
ERP118273SS2_2: Single-cell RNA sequencing of human steady-state immune cells from the lamina propria of colon and matching mesenteric lymph nodes
ERP118275Characterization of fish pathogens ECPs
ERP118280Detection of an HLA-DQB1*05:05:02
ERP118281-
ERP11828245345
ERP118283Human dendritic cell subsets in acute skin inflammation
ERP118284RNA-seq analysis following REVERBalpha knockdown in fibroblasts
ERP118289Transcriptomic analysis of mouse splenic B cells that are either TG2-sufficient or TG2-deficient
ERP118290Pivotal roles for pH, lactate and lactate-utilizing bacteria in the stability of a human colonic microbial ecosystem
ERP118292Understanding the viral piRNA production in mosquitoes
ERP118293Deciphering the antennal transcriptome in response to arboviral infection
ERP118298Ostreobium quekettii SAG6.99 RNAseq transcriptome sequencing
ERP118312Tackling rapid radiations with targeted sequencing
ERP118313Search for polymorphisms in the structural regions of the LGB1, LGB2 and LALBA genes of the domestic horse and their association with expression level. National Science Centre (Poland) grant: 2016/21/N/NZ9/01350
ERP118315VDJ: Single-cell RNA sequencing of human steady-state immune cells from the lamina propria of colon and matching mesenteric lymph nodes
ERP118317B4GALT1 Is a New Candidate to Maintain the Stemness of Lung Cancer Stem Cells
ERP118318COMPLEMENT C3aR ACTS AS AN ONCOSUPPRESSOR IN COLORECTAL CANCER BY MODULATING GUT MICROBIOTA
ERP118319An indigenous Saccharomyces uvarum population with high genetic diversity dominates uninoculated Chardonnay fermentations at a Canadian winery
ERP118320A nanopore based chromosome-level assembly representing Atlantic cod from the Celtic Sea
ERP118322Benz2616 Rambouillet sheep mRNA sequencing
ERP118324Arginine sensing regulates virulence gene expression and disease progression in enteric pathogens.
ERP118327Metagenomic sequencing was performed after bloodstream infection in patients with finger injuries
ERP118329Novel RHD mutation resulting in an amino acid substitution in the first extracellular loop of the Rhesus protein
ERP118332Transcriptomics in Cuscuta spp.
ERP118333tRNA 2'-O-methylation by a duo of TRM7/FTSJ1 proteins modulates small RNA silencing in Drosophila.
ERP118339Disrupting butterfly caterpillar microbiomes does not impact their survival and development
ERP118341DNA methylation patterns vary in boar sperm cells with different levels of DNA fragmentation
ERP118343Functionally annotating regulatory elements in the equine genome using histone mark ChIP-Seq
ERP118344A new Haloactinobacterium species, isolated from soil of a copper mine
ERP118347123
ERP118348The ability to manipulate ROS metabolism in pepper may affect aphid virulence
ERP118351Single-cell gene expression of germinal center B cells from CXCL12-conditionally deficient and –sufficient mice
ERP118353Inclusion of Oxford Nanopore long reads improves all microbial and phage metagenome-assembled genomes from a complex aquifer system
ERP118355Amplicon Deep Sequencing of Plasmodium falciparum Kelch13 isolates from Senegal
ERP118356Burkholderiaceae genomes sequenced for genome mining
ERP118357QTL map based candidate gene discovery for salt tolerance in rice
ERP118358Affect of antiviral ribavirin on YFV WT and vaccine strains.
ERP118359Fermented food metagenomics reveals substrate-associated differences in taxonomy, antibiotic resistance and health-associated determinants
ERP118362Reciprocal cybrids reveal how organellar genomes affect plant phenotypes
ERP118364Neolithic genomes reveal a distinct ancient HLA allele pool and population transformation in Europe
ERP118365How phlorizin affects gut microbes
ERP118366Pecten maximus (king scallop) genome assembly, xPecMax1, alternate haplotype
ERP118367Pecten maximus (king scallop) genome assembly, xPecMax1
ERP118369Microbial sequencing of traditional Chinese medicine fermentation broth
ERP118371Role of SigB in Listeria monocytogenes biofilm formation
ERP118372Biogas upgrading from lipid-rich wastewaster promoted by biogas recirculation.
ERP118373Analysis of freeze-dried faecal samples collected from individuals between 1974 and 1980
ERP118374Lutra lutra (Eurasian otter) genome assembly, mLutLut1, alternate haplotype
ERP118375Lutra lutra (Eurasian otter) genome assembly, mLutLut1
ERP118376RNAseq of the two isogenic variants of the CAL27 head-and-neck cancer cell line with wild-type or mutated CYP1B1 genotype
ERP118377ChIP-seq of HNF4A and GATA6 in oesophageal adenocaricnoma OE19 cells
ERP118378Habitat selection linked to dietary specialisation in the Eurasian pigmy shrew (Sorex minutus)
ERP118381High connectivity of the white seabream (Diplodus 2 sargus, L. 1758) in the Aegean Sea, eastern 3 Mediterranean basin
ERP118382(Cross-)Resistance to Antibiotics and Non-Antibiotic Antibacterials in Laboratory Isolates of Escherichia coli
ERP118383Outbreak of invasive pneumococcal disease connected to shipyard, Finland, May-October 2019
ERP118385Northern German Theodoxus fluviatilis population structure based on ITS2 phylogenetic markger gene study
ERP118387Improved reference genome assembly for Pacific oyster (Crassostrea gigas)
ERP118393Sequencing of Lymniadeae from Estonia and Germany
ERP118394Whole genome sequencing of Chryseobacterium sp. CECT 9390
ERP118396Whole genome sequencing of Chryseobacterium sp. CECT 9393
ERP118397Whole genome sequencing of Chryseobacterium sp. CECT 9293
ERP118398Shotgun sequencing of archaelogical paleofeces and sediments
ERP118400Relationships between nitrogen cycling microbial community abundance and composition reveal the indirect effect of soil pH on oak decline
ERP118403Genome sequence and assembly of abnormal chromosome 10 genome Ab10
ERP118404High-resolution transcriptional profiling of Anopheles gambiae spermatogenesis reveals mechanisms of sex chromosome regulation
ERP118406Effects of a resistance gene affecting fungal pathogen infection on the microbiome of crop residue: the case of the Leptosphaeria maculans-Brassica napus pathosystem
ERP118408Transcriptomes of MDA-MB-231 and LM2-4/luc+ human breast cancer cell-lines
ERP118409Clades of huge phage from across Earth's ecosystems
ERP118410silage_16S_ML
ERP118412Sequencing genome and transcriptome of Sparganum proliferum
ERP118414Single cell RNA-sequencing of lineage-negative fraction of stromal cells isolated from inguinal white adipose tissue in mouse
ERP118417Linked-read genome of Nesidiocoris tenuis, a zoophytophagous mirid
ERP118418Sciurus vulgaris (red squirrel) genome assembly, mSciVul1, alternate haplotype
ERP118419Sciurus vulgaris (red squirrel) genome assembly, mSciVul1
ERP118420Neostethus bicornis genome assembly, fNeoBic2, alternate haplotype
ERP118421Neostethus bicornis genome assembly, fNeoBic2
ERP118422Sciurus carolinensis (grey squirrel) genome assembly, mSciCar1, alternate haplotype
ERP118423Sciurus carolinensis (grey squirrel) genome assembly, mSciCar1
ERP118424Candidate Gene Case Control Study of Human African Trypanosomiasis
ERP118425Sex control breeding of obscure pufferfish
ERP118429Shotgun sequencing of a Torymus bedeguaris larva (sample T3) inhabiting a rose bedeguar gall, for the purpose of studying associated microorganisms
ERP118430Shotgun sequencing of a Diplolepis rosae larva (sample D5) inhabiting a rose bedeguar gall, for the purpose of studying associated microorganisms
ERP118431Shotgun sequencing of a Diplolepis rosae larva (sample D7) inhabiting a rose bedeguar gall, for the purpose of studying associated microorganisms
ERP118432Shotgun sequencing of a Diplolepis rosae larva (sample D11) inhabiting a rose bedeguar gall, for the purpose of studying associated microorganisms
ERP118433Shotgun sequencing of a Periclistus brandtii larva (sample P9) inhabiting a rose bedeguar gall, for the purpose of studying associated microorganisms
ERP118434Shotgun sequencing of a Orthopelma mediator larva (sample O6) inhabiting a rose bedeguar gall, for the purpose of studying associated microorganisms
ERP118435Shotgun sequencing of a Orthopelma mediator (sample O8) larva inhabiting a rose bedeguar gall, for the purpose of studying associated microorganisms
ERP118436Shotgun sequencing of a Orthopelma mediator (sample O10) larva inhabiting a rose bedeguar gall, for the purpose of studying associated microorganisms
ERP118437Shotgun sequencing of a Orthopelma mediator (sample O12) larva inhabiting a rose bedeguar gall, for the purpose of studying associated microorganisms
ERP118438Inferring tunicate relationships and the evolution of the tunicate Hox cluster with the genome of Corella inflata
ERP118441To investigate the association between gut microbiota and formation of cholesterol gallstone
ERP118444Five Streptococcus suis complete genomes
ERP118446Characterising viable bacteria on hat fed to horses when left dry, after soaking in water or after high temperature steaming.
ERP118448Paleogenomic diversity of micro-eukaryote communities obtained from DNA archived in sediments of 48 French lakes
ERP118449Linked-read genome of Bracon brevicornis, a parasitoid wasp, with annotation
ERP118450Hybrid genome of Trichogramma brassicae, a parasitoid wasp
ERP118452Phage-host interactions in Alteromonas
ERP118457Genomic and phenotypic characterisation of invasive neonatal and colonising group B Streptococcus isolates from Slovenia, 2001-2018
ERP118460CRISPRi screen in E. coli MG1655 with the EcoWG1 library
ERP118463FILTURB1: A comparison of eDNA field sampling methods to characterise amphibian communities in turbid aquatic environments
ERP118468Erythroid differentiation regulator-1 is induced by microbiota in early life and drives intestinal stem cell proliferation and regeneration
ERP118469Effect of forage particle size on hindgut fermentation and the fecal bacterial community
ERP118470Novel RHD gene variant resulting in the abolition of the stop codon
ERP118471Identification of an ABO*A2-like allele based on a novel combination of three previously known ABO gene polymorphisms
ERP118473A novel splice- site mutation in the ABO gene causing an ABO Bel subgroup phenotype
ERP118474Bioinformatics pipelines comparison for the analyses of 16S metagenomic data in clinical samples
ERP118475Comparison of RNA-seq of Actinobacillus pleuropneumoniae (WT and (p)ppGpp0) under the absence of branched chain amino acids
ERP118476Changes in peatland microbiome through rewetting
ERP118478Higher spatial than seasonal variation in floodplain soil eukaryotic microbial communities
ERP118485Mapping the bacterial ecology on the phyllosphere of dry and post soaked grass hay for horses
ERP118487Characterization of the gut microbiota of the Antarctic sea urchin Abatus agassizii
ERP118489Genome of cultivated Magnetospirillum species to decipher the evolution of magnetotaxis
ERP118490Genome of cultivated Magnetospirillum species to decipher the evolution of magnetotaxis
ERP118491Genome of cultivated Magnetospirillum species to decipher the evolution of magnetotaxis
ERP118492Genome of cultivated Magnetospirillum species to decipher the evolution of magnetotaxis
ERP118493Genome of cultivated Magnetospirillum species to decipher the evolution of magnetotaxis
ERP118494Comparative analyses of vertebrate gut microbiomes reveal convergence between birds and bats
ERP118497Effect of heat stress on developing wheat grain
ERP1184982-year decomposition study of seagrass Zostera muelleri leaf and rhizome/roots in Australia
ERP118499ChIP-seq analysis of RNA polymerase II occupancy in wt, wee1-50 and cdc25-22 fission yeast cells
ERP118504Small RNAome characterization of Gigaspora margarita BEG34 germinated spores
ERP118505RNA-seq analysis of astrovirus replication in human intestinal enteroids reveals multi-cellular tropism and an intricate host innate immune landscape
ERP118508Secale cereale L. inbred line 'Lo7' genome assembly paper Rabanus-Wallace et. al
ERP118509RNA-seq of Mycobacterium smegmatis wild type and deletion mutant of the redox-sensing MarR-type repressor HypS revelas HypS function in hypochlorite and antimicrobial resistance.
ERP118510SATAY2.0
ERP118511A snapshot of diversity: Intraclonal variation of Escherichia coli clones as commensals and pathogens
ERP118513mtDNA genomes of seven hominin remains from Bacho Kiro Cave
ERP118516High-accuracy nanopore consensus sequencing for protein engineering
ERP118518Reactors applied to the treatment of vinasse - FEAGRI / UNICAMP
ERP118523silage_ITS_ML
ERP118524Microbial Diversity in Chinese Healthy and Patients with Acne
ERP118530Microbiome signature in insect-based food
ERP118531Development and validation of an HPLC method for the quantitative analysis of bromophenolic compounds in the red alga Vertebrata lanosa
ERP118532Development and validation of an HPLC method for the quantitative analysis of bromophenolic compounds in the red alga Vertebrata lanosa
ERP118533A unified protocol for simultaneous extraction of DNA and proteins from archaeological dental calculus
ERP118535Complete genome sequence of 6 Mycoplasma feriruminatoris strains, fast-growing mycoplasma species isolated in Switzerland
ERP118536A phylogenomic analysis of Nepenthes (Nepenthaceae)
ERP118537RNA-seq of murine mesenchymal stem cells during differentiation to osteoblasts, treated with tofacitinib or baricitinib against vehicle control
ERP118538Comparative and population genomics approaches reveal basis of adaptation to desert conditions in a small rodent
ERP118540Tick-Borne Relapsing Fever caused by Borrelia persica in a Traveler returning from Central Asia
ERP118542WGS for Paragraph SV assessment
ERP118543Genetic determinants of phage infection by transposon sequencing
ERP118544Single cell transcriptional characterization of 1488 human megakaryocytes and 885 haematopoietic stem cells
ERP118545Off Earth Identification of Bacterial Populations Using 16S rDNA Nanopore Sequencing
ERP118546Obesity-Induced Microbiome Alterations Result in Severe Gastrointestinal Graft-Versus-Host Disease Following Allogeneic Hematopoietic Stem Cell Transplantation
ERP118549Transcriptome comparison after RCO induction
ERP118550Bacteriome of Washing machines
ERP118551Salmonella Agona outbreak in 2019
ERP118553Emergence of a truly multidrug-resistant Candida kefyr (Kluveromyces marxianus) in Kuwait
ERP1185543'-Seq LK Pabpn1 KD in vivo
ERP118555The impacts of iron limitation and ocean acidification on the cellular stoichiometry, photophysiology, and transcriptome of Phaeocystis antarctica
ERP118563Microbiome signatures of diagnosis and aggressiveness of a neurovascular disease, cavernous angioma
ERP118566Two case reports with multifocal infections due to Campylobacter fetus
ERP118568Human Milk Composition to 24 Months
ERP118575Six Acinetobacter genomes
ERP118577Molecular characterization of extended-spectrum beta-lactamase genes in Enterobacteriaceae isolates from Nigeria
ERP118581This study was conducted to understand the epidemiology of antimicrobial resistant bacteria transmission between animals, people and environment in the greater greater Serengeti ecosystem.
ERP118583First descriptions of larval stages of Grouvellinus spp. (Insecta: Coleoptera: Elmidae) from Borneo matched with the imagines by mtDNA barcodes.
ERP118584A low-digestibility protein supplementation during an energy-restricted diet reduces visceral fat and stimulates gut microbiota aminoacid metabolism in subjects with metabolic syndrome
ERP118585Sequencing of 16S rRNA amplicons tp understand microbiological contamination of beef carcases and products in the boning room of two Australian beef export abattoirs.
ERP118586The impact of gut microbiota on chemotherapy-induced gastrointestinal toxicity in children with leukemia
ERP118588Phylogeography of Pleistodontes nigriventris from northern and southern populations in Australia
ERP118589Enterococcus burkinafasonensis genome
ERP118591Latrine inside an old palace (18th century) (Sassari - Italy)
ERP118592Evolution of gut microbiome in early childhood: a cross-sectional study of Chinese children
ERP118593Bi-allelic SNP markers of 133 cultivar and 112 wild soybean samples through whole-genome sequencing
ERP118594DIVERSITY OF A PHOSPHATE TRANSPORTER GENE AMONG SPECIES AND ISOLATES OF ARBUSCULAR MYCORRHIZAL FUNGI
ERP118595PoolSeq analysis of seasonal variation in a natural population of the non-biting midge Chironomus riparius
ERP118597Amlakhadi sample WGS study
ERP118600The chromosomal architecture of acute myelocytic leukemia HL-60 cells upon all-trans retinoid acid treatment
ERP118602A new symbiotic lineage related to Neisseria and Snodgrassella arises from the dynamic and diverse microbiomes in sucking lice
ERP118603RNA-seq of phage VPE25 treated Enterococcus faecalis OG1RF relative to untreated controls
ERP118607Antibacterial compounds from actinomycetes collected in Switzerland
ERP118608The basis for natural multiresistance to phage in Pseudomonas aeruginosa
ERP118611Field-adapted full genome sequencing of peste-des-petits-ruminants virus using Nanopore sequencing
ERP118615Bacillus velezensis genome
ERP118617WGS of Noire du Velay ewes with low and high prolificacy
ERP118618Whole genome sequencing of Swedish Giant Schnauzers with and without hypothyroidism
ERP118619A Reference Genome Sequence for the European Silver Fir (Abies alba Mill.): A Community-Generated Genomic Resource
ERP118622Single Molecule Real-Time DNA sequencing of HLA genes
ERP118624Sequencing data: Lake mixing regime selects methane-oxidation kinetics of the methanotroph assemblage
ERP118626Phototrophic bacterial diversity in Gujarat, India
ERP118635Phototrophic bacterial diversity in gujarat, India
ERP118637Holistic optimization of bioinformatic analysis pipeline for detection and quantification of 2'-O-methylations in RNA by RiboMethSeq
ERP118639Phototrophic bacterial diversity from Gujarat, India
ERP118640Phototrophic bacterial diversity in gujarat, India
ERP118641Phototrophic bacterial diversity of gujarat, India
ERP118643Virome sequencing of human stool
ERP118646Metagenomes of cloud water sampled at puy de Dôme Mountain (1465m asl, France).
ERP118651Role of caecal microbiota in differential resistance to Campylobacter jejuni colonisation in chickens.
ERP118656Phototrophic bacterial diversity in Gujarat, India
ERP118657Native AM fungal inoculation in Estonian quarry for vegetation restoration
ERP118659Dubourgella massiliensis genome
ERP118660Coliphages complete genomes
ERP118661Pototrophic bacterial diversity in Gujarat, India
ERP118662Phototrophic bacterial diversity in Gujarat, India
ERP118663The Relationship between Fecal Bile Acids and Microbiome Community Structure in Pediatric Crohn's Disease
ERP118664Phototrophic bacterial diversity in gujarat, India
ERP118665Phototrophic bacterial diversity of gujarat, India
ERP118666Phototrophic bacterial diversity of gujarat, India
ERP118668RNA-seq of Phlebotomus papatasi after feeding with blood, and blood containing Leishmania major, Leishmania donovani and Herpetomonas muscarum.
ERP118669Phototrophic bacterial diversity of gujarat, India
ERP118670Phototrophic bacterial diversity of gujarat, India
ERP118671Phototrophic bacterial diversity of gujarat, India
ERP118672Phototrophic bacterial diversity of gujarat, India
ERP118673Differential efficacies of Cas nucleases on microsatellites involved in human disorders and associated off-target mutations
ERP118675Phototrophic bacterial diversity of gujarat, India
ERP118676Rain water from Opme meteorological station (680m, central France)
ERP118677Phototrophic bacterial diversity of gujarat, India
ERP118678Phototrophic bacterial diversity of gujarat, India
ERP118681Phototrophic bacterial diversity of gujarat, India
ERP118682Coherent and complementary results from marker gene time-series and minimalist mixed-cultures
ERP118684Phototrophic bacterial diversity of gujarat, India
ERP118685Microbial genomes from non-human primate gut metagenomes expand the primate-associated bacterial tree of life with over 1,000 novel species
ERP118686Phototrophic bacterial diversity of gujarat, India
ERP118689Role of Ribonuclease inhibitor (RNH1) in haematopoietic stem cell function
ERP118694Pervasive and non-random recombination in near-full length HIV genomes from Uganda. HIV genomes assembled from clinical samples. Please see www.pangea-hiv.org for details and additional information.
ERP118698Interspecific interactions infections select against Pseudomonas aeruginosa mutators, analysis of clinical samples
ERP118700Sampling of UK - North sea coastline
ERP118701Whole genome sequencing of Klebsiella pneumoniae
ERP118702hvCAS treated with T3-EC
ERP118705Seasonal and diel patterns of bacteriophages in the Red Sea
ERP118706Yamadazyma vietnamensis f.a., sp. nov. endophytic yeast from coconuts
ERP118707The phylogeny of Ptiliidae (Coleoptera: Staphylinoidea) – the smallest beetles and their evolutionary transformations
ERP118709Gut microbiota and gallstone formation - cohousing study
ERP118710Antigenic variation by switching inter-chromosomal interactions with an RNA splicing locus in trypanosomes
ERP118714Phototrophic bacterial diversity of gujarat, India
ERP118718Anaerobic digestion of human excreta
ERP118720Genome_wide_CRISPR_gRNA_screens_in_MLL_ENL_transformed_Hoxb8_cells
ERP118722Import of aspartate and malate by DcuABC drives H2/fumarate respiration to promote Salmonella initial gut-luminal colonization
ERP118723Bacterial sequences
ERP118725Verification of the polyamine biosynthesis mutant
ERP118726Prokaryote community metabarcoding data from sediments of coastal and estuarine locations of the Bay of Biscay
ERP118729out
ERP118730Full set of variants (113 SNPs) within the LTA4H gene in a Portuguese dataset of 112 TB patients and 120 controls in order to assess their association with TB susceptibility
ERP118731Direct RNA sequencing reveals m6A modifications on adenovirus RNA are necessary for efficient splicing
ERP118735Sporaefaciens musculi gen. nov., sp. nov., a novel bacterium isolated from the caecum of an obese mouse
ERP118736Sporaefaciens musculi gen. nov., sp. nov., a novel bacterium isolated from the caecum of an obese mouse ONanopore_reads
ERP118744First report of Erwinia amylovora causing fire blight in apple in India.
ERP118745Tick-symbiont interactions
ERP118750Effects of diets high in animal or plant protein on oxidative stress in individuals with type 2 diabetes: a randomized clinical trial
ERP118754Gut microbiota composition and frailty in elderly patients with Chronic Kidney Disease
ERP118756novel SNPs in the genomic region of bovine BAMBI gene
ERP118758GeDI-MeDIP sequencing: A novel method for parallel identification of genetic and epigenetic variations in a same reduced fraction of large genomes
ERP118759The epigenetic pattern and genome-wide CTCF occupancy in HL-60 cells treated with ATRA
ERP118761Single Sentence Summary: Short-term treatment with rapamycin reverses periodontal bone loss, attenuates inflammation, and remodels the oral microbiome toward a more youthful state.
ERP118762Comprehensive single-PCR 16S and 18S rRNA community analysis validated with mixed 16S and 18S rRNA mock communities and denoising algorithms
ERP118763Single-cell RNA sequencing of 22 Hodgkin lymphoma tumors and 5 reactive lymph nodes
ERP118769Genetic variation of the giant mud crab Scylla serrata in relation to metal pollution of Indonesian Mangroves
ERP118770MiR-200b-5p as a suppressor by targeting FGF4
ERP118771MiR-200b-5p as a suppressor by targeting FGF4
ERP118773Functional MHC diversity in Scottish Blackface sheep
ERP118775FloChIP's histone mark data obtained in multiplexing mode
ERP118776FloChIP TF benchmarking data
ERP118777Molecular characteristics of Carbapenemase-producing Enterobacterales in the Netherlands; Results of the 2014-2018 national laboratory surveillance
ERP118778Phylogenetic analysis and distribution of torque teno virus in Romanian healthy individuals
ERP118779Gut microbiome alterations after high-fat low-carbohydrate weight reduction diet: pros and cons
ERP118782Tree root zone microbiome: exploring the magnitude of environmental conditions and host tree impact
ERP118784Vulnerability of drug-resistant EML4-ALK rearranged lung cancer to transcriptional inhibition
ERP118789Resistance genes in landrace collection
ERP118790Structural venomics reveals evolution of a complex venom by duplication and diversification of an ancient peptide-encoding gene
ERP118793Clytia hemisphaerica genome assembly.
ERP118797Peptide venom composition of the fierce stinging ant Tetraponera aethiops
ERP118799Insight into the Microbiome of the Subterranean Aphid Anoecia corni
ERP118800Adding insult to injury: The effects of chronic oxybenzone exposure and elevated temperature on two reef-building corals
ERP118802Environmental impact of underwater exhausted CO2 from ships and its potential as antifouling strategy
ERP118806Population genetics and genomics of Trichogramma evanescens
ERP118809Photosynthetic culture enrichments of cloudwater
ERP118810Sequencing and assembly of 5 wheat lines
ERP118812Generation and Evaluation of Hybrids of Pleurotus giganteus (Berk.) Karunarathna & K.D. Hyde and Identification of the Hybrids using ISSR Markers
ERP118814tRNA fragments (tRFs) populations analysis in mutants affecting tRNAs processing and tRNA methylation
ERP118815Molecular epidemiology of EV-D68 based on the VP1 sequences
ERP118816Child stunting is a significant health concern in low and middle-income countries. Delayed and reduced growth or stunting results from nutrition deficiencies, genetics, and altered gut microbiota. Recent studies have shown that gut bacteria of stunted children are different from their normal counterparts, generally with lower Firmicutes/Proteobacteria ratio. While the role of bacteriophages (phages for short) in regulating bacterial populations in the environment is well studied, their role in gut dysbiosis is unknown. In collaboration with the International Centre for Diarrhoeal Disease Research, Bangladesh, we have studied the role of phages in healthy and stunted children from Bangladesh. We show that these children harbor distinct gut bacteriophages relative to their non-stunted counterparts. Furthermore, the gut bacteriophages isolated from this children are infectious and can regulate bacterial abundance and composition in an age-specific manner, highlighting their possible role in the pathophysiology of child stunting.
ERP1188172-year decomposition study of seagrass Zostera muelleri leaf and rhizome/roots in Australia - associated sediments
ERP118819Fusarium from muskmelon
ERP118820Application of next generation sequencing (NGS) for identification of prosthetic joint infection pathogens: a diagnostic evaluation study
ERP118822Lab-scale aerobic granular sludge fed with acetate
ERP118823Conditioning of soil with wild plant species suppresses thrips
ERP118824Tracing back the evolutionary route of the Enteroinvasive Escherichia coli (EIEC) and Shigella through the example of the highly pathogenic O96:H19 EIEC clone
ERP118826Shotgun sequencing of Culicoides infected by Schmallenberg virus
ERP118830The objective of this study was to determine the changes in the rumen microbiota in response to adding nitrate to diets with different concentrate to forage ratios and explore potential links with CH4 emissions.
ERP118831DeepHotMicrobe: Otaniemi bacterial community 16S rRNA gene amplicon sequencing
ERP118833RNAseq of the protease transcriptome of primary murine alveolar epithelial cells type II (AECII) and the murine lung cells MLE-15
ERP118834RNAseq of trachea, bronchi and lungs of mice to investigate expression and distribution of trypsin-like proteases in the murine lower airways.
ERP118836Isolation of a Staphylococcus aureus capsulated derivative after passage of non-encapsulated isolate HU-14 through the bloodstream using a mouse model of bacteremia.
ERP118840RNA-seq of human lung cancer cell line A549-NC and A549-SLC2A5 knockout xenograft in balb/c nude mice.
ERP118842Phylogenetic relationships of Oxytropis species of the Arctobia section (Fabaceae) of the Russian Far East
ERP118843Phylogenetic relationships of Oxytropis species of the Arctobia section (Fabaceae) of the Russian Far East
ERP118844Phylogenetic relationships of Oxytropis species of the Arctobia section (Fabaceae) of the Russian Far East
ERP118849RNA-seq of yeast cell cycle, used for absolute gene expression quantification
ERP118852Mortality in Escherichia coli bloodstream infections: antibiotic resistance still does not make it.
ERP118870Genome sequences of T7 mutants with chimaeric tail fibres
ERP118875Faecal microbiota assessment on rats under sub-chronical oral administration of Bacteroides uniformis CECT 7771
ERP118879Towards Nutrition-Sensitive Agriculture: an evaluation of biocontrol effects, nutritional value, and ecological impact of bacterial inoculants
ERP118882Freshwater Metagenomes from European Lakes and Reservoirs (including time-series metagenomes)
ERP118883Antibody repertoire sequencing of blood and bone marrow plasma cell compartments following lymphocytic choriomeningitis virus infection
ERP118884Association of congenital cardiovascular malformation and neuropsychiatric phenotypes with 15q11.2 (BP1-BP2) deletion in the UK Biobank
ERP118887Bacterial community composition of the Karnaphuli estuary
ERP118891Differences of Gut Microbial Diversity among Drug Users, Drug Abstainers and Methadone Maintenance Treatment Patients
ERP118893Different roles of environmental selection, dispersal, and drift in the assembly of intestinal microbial communities of freshwater fish with and without a stomach
ERP11889625 SNPs identified from 186 Dazu Black Goats.
ERP118897This study aims to explore the gut microbial diversity of drug abstainers, drug users and methadone maintenance treatment (MMT) patients. Methods: 99 participants (28 drug abstainers, 16 MMT patients, 27 drug users and 28 healthy controls) with strict screening standards were enrolled. Dietary nutrition intake and fecal DNA of samples were obtained and microbial diversity was analyzed through high-throughput sequencing with bioinformatics tools and SPSS 20.0. Results: The abundance of Bifidobacterium and Lactobacillus in MMT patients was the highest (P = 0.001–0.025), which was positively correlated with Milk intake (r = 0.318–0.419, P < 0.01). Drug users showed the highest ratio of Ruminococcus (P = 0.001–0.042). Beta diversity analysis revealed the Jaccard distance of gut microbial community in drug abstainers was apart from that in healthy controls, while MMT patients clustered together with drug users. The dietary structures showed clustered distribution of drug users and drug abstainers, MMT patients was apart from others. Total energy of MMT patients was the highest (P < 0.05). Conclusion: Drug addiction and withdrawal could significantly shift human gut microbiota in Beta diversity and predominant taxa. Drug usage and diet both contribute more strongly to microbial divergence.
ERP118899ASF.FERP.15
ERP118901Recent introgression between Taiga Bean Goose and Tundra Bean Goose results in a largely homogeneous landscape of genetic differentiation
ERP118904Incomplete sex chromosome dosage compensation in the Indian meal moth, Plodia interpunctella, based on de novo transcriptome assembly
ERP118905The Anopheles gambiae 1000 Genomes Project - Phase 2
ERP118907RNA-seq data representing the response of Seminavis robusta MT+ cells to the sex pheromone SIP-.
ERP118908Total RNA from rat hypothalamus sampled at Embryonic day 17 (E17), was sequenced using a 3'DGE (Digital Gene Expression) sequencing approach.
ERP118909microRNA profiling of ileum of Japanese quails differing in their Phosphorus utilization
ERP118911mRNA transcriptome profiling of ileum in Japanese quails differing in their Phosphorus utilization
ERP118914Vulnerability of drug-resistant EML4-ALK rearranged lung cancer to transcriptional inhibition
ERP118916Toward a resolution of the cosmopolitan Botryllus schlosseri species complex (Ascidiacea, Styelidae): mitogenomics and morphology of clade E (Botryllus gaiae) See https://doi.org/10.1093/zoolinnean/zlaa023
ERP118917Transcriptomic changes in longitudinal biopsies from a melanoma patient with spontaneous remission
ERP118920Coated/Uncoated Tobacco Seeds
ERP118923RNA-seq study of the response of the diatom Leptocylindrus aporus to changing temperature conditions.
ERP118924ChIP-seq of H3.3K4A/K36A mutant ESCs 2
ERP118926Analyses of viruses from vaccine induced rabies cases and corresponding vaccine batches
ERP118928Significant shifts in the microbiomes of smokers with periodontitis after periodontal therapy with adjunctive antibiotics as revealed by 16S rDNA amplicon next generation sequencing
ERP118929A North Sea fish community was monitored via environmental DNA (eDNA) over the summer season of 2015 in different time intervals and at different locations.
ERP118931PRO-seq in control and H3.3 K4A mutant mESCs
ERP118946Virgibacillus ihumii genome
ERP118947Halobacillus ihumii genome
ERP118948Methylation, miRNA and gene expression have an integrated sex-specific role in the pineal gland of chickens subjected to unpredictable light schedules
ERP118955Shotgun and Capture data from sedaDNA from North Siberia (lake CH12) using the Larix chloroplast genome
ERP118964Combined prebiotic and microbial intervention improves oral cholera vaccination responses in a mouse model of childhood undernutrition
ERP118972using fecal microbiota composition as a non-invasive diagnostic tool to classify colorectal carcinoma and adenoma.
ERP118974DNA-methylation changes in the brain and fixation of alleles between chicken lineages due to the selection on two extremes of a maladaptive behaviour
ERP118981human single-chain variable fragment antibody against CXCR4
ERP118983Single cell RNA sequencing of murine omental macrophages
ERP118989Genome sequencing of the ant Cardiocondyla obscurior BR2009-alpha and its associated microbes
ERP118990Genome sequencing of the ant Cardiocondyla obscurior JP2010-OypB and its associated microbes
ERP118995Endothelial cell heterogeneity in pathological angiogenesis characterized by metabolic transcriptome diversity
ERP118997Hydrogen sulfide stimulates Mycobacterium tuberculosis respiration and growth to exacerbate TB disease
ERP119002Diversity hotspot and unique community structure of foraminifera in the world's deepest marine blue hole-Sansha Yongle Blue Hole
ERP119005Whole genome sequencing to study phylogenetics, population structure, genotype-phenotype associations, sex chromosome evolution and host-parasite interactions in Danaus butterflies and their relatives.
ERP119008Selection of Novel Nanobodies Targeting EGFR Using Phage Display Library
ERP119009Kp_OXA48_NDM1_project_2019
ERP119010Kp_OXA48_NDM1_project_2019b
ERP119012Kp_OXA48_NDM1_project_2019c
ERP119014teststudy1
ERP119015European study on Klebsiella pneumoniae carrying both NDM-1 and OXA-48
ERP119017The impact of chemerin on transcriptomic profile of swine luteal cells during mid-luteal phase of estrous cycle.
ERP119019MAFB ChIPseq in Human EndoCBH2 cells
ERP119020Stroma remodeling and reduced cell division define durable response to PD-1 blockade in melanoma.
ERP119026To characterize and compare the gut microbiome of grey seals (Halichoerus grypus) by amplify 16S rDNA sequencing of rectal faecal samples from different age groups of grey seals resident in different environments on the Isle of May, Scotland.
ERP119036Rampant genome-wide admixture across the Heliconius radiation
ERP119039Acipenser ruthenus (sterlet) genome assembly, fAciRut3, maternal haplotype
ERP119040Acipenser ruthenus (sterlet) genome assembly, fAciRut3, paternal haplotype
ERP119042Transcriptome sequencing of human induced pluripotent stem cell-derived brain endothelial cells. Overall design: Examined one time point (Day 10 of differentiation) from two different rounds of iPSC BMECs differentiation. Sample name: Cl1 (Clone 1) Total samples: 2 (two different rounds of differentiation)
ERP119044Alteration in global DNA methylation status following preconditioning injury influences axon growth competence of the sensory neurons
ERP119049Polycystic Kidney Disease Progression Expression Analysis
ERP119050Whole exome sequencing in SMRad51 and Control primary mouse embryonic fibroblasts
ERP119055Short-term exposure to high-water temperature causes a shift in the microbiome of the common aquarium sponge Lendenfeldia chondrodes
ERP119057RNAseq data of Hyles euphorbiae tissues exposed to control and toxin-containing diet
ERP119064Draft genome of Shewanella T2.3D-1.1
ERP119067Complete genome of the barotolerant L. monocytogenes RO15 strain and comparison with other strains isolated from food and food processing environments
ERP119071RNA-seq samples of ten tissues for Zea mays subsp. mays B73 (version 5)
ERP119094Whole genome sequencing of Drechmeria coniospora, by Oxford Nanopore Technology sequencing
ERP119095Whole genome sequencing of Drechmeria coniospora, by Oxford Nanopore Technology sequencing, after 20 years of continuous culture
ERP119096Whole genome sequencing of Drechmeria coniospora, by Oxford Nanopore Technology sequencing
ERP119104Aerosol antibiotic resistance gene dissemination among hospital departments by culture-facilitated comparative metagenomics
ERP119109Dirkmeia churashimaensis: an emerging pathogen in a neonatal intensive care unit
ERP119111To characterize and compare the gut microbiome of grey seals (Halichoerus grypus) by amplify 16S rDNA sequencing of rectal faecal samples from different age groups of grey seals resident in different environments on the Isle of May, Scotland.
ERP119113Genotypic heterogeneity and comparative pathogenicity of environmental isolates of Papiliotrema laurentii
ERP119114Analysis of error profiles in deep next-generation sequencing data
ERP119121Effect of fecal microbiota transplantation on calf diarrhea
ERP119122Saturated Fat Is More Metabolically Harmful for the Human Liver Than Unsaturated Fat or Simple Sugars
ERP119124Natural selection and repeated patterns of molecular evolution following allopatric divergence
ERP119125Salmonella Enteritidis outbreak in France in November 2019
ERP119126The genome of Microthlaspi erraticum (Brassicaceae) using Pacbio and Illumina Hiseq data.
ERP119127Species specificity and intraspecific variation in the chemical profiles of Heliconius butterflies across a large geographic range
ERP119128A novel multidrug resistant Klebsiella pneumoniae strain harboring three co-occurring colistin resistance genes
ERP119131IgA immunoglobulin sequencing of Peyer's patch germinal center B cells derived from WT and SAP-deficient mice
ERP119133To assess the degree of homology among Blue-spotted mudskipper found in three selected mangroves area in Peninsular Maaysia
ERP119135Glacial microbiota are hydrologically connected and temporarily variable.
ERP119136Listeria valentina sp. nov. isolated from a farm environment in Spain
ERP119138A framework for gene mapping in wheat demonstrated using the Yr7 yellow rust resistance gene
ERP119139Effect of plant-related predictors and drought on sixteen grassland communities grown as monocultures
ERP119142RNA-seq samples of ten tissues for each of the 25 genomes of the Nested Associated Mapping (NAM) maize sequencing project
ERP119147Functional validation of a gene regulatory element as a candidate cancer driver using RNA-seq in HEK293 cells
ERP119150Single-cell RNA-seq analysis of murine regulatory T cells from the spleen, lung, and gut at steady-state and after murine IL-2 mutein treatment
ERP119153RRBS of LPS-treated bovine endometrial epithelial cells
ERP119154Development and Diversity of Bacterial Biofilms in Response to Internal Tides, a case study off the Coast of Kuwait
ERP119158QTL mapping of tree leaf shape in high and low altitude in the Qinghai-Tibetan plateau
ERP119161Description of new Yersinia species
ERP119163Ancient Sardinia genome-wide 1240k capture data generation and analysis
ERP119164Longitudinal CF Study
ERP119165Error-corrected sequencing strategies specific for leukemias
ERP119166Monitoring the influx of new species through citizen science: The first introduced ant in Denmark
ERP119167Increased weight gain by C-section: Functional significance of the primordial microbiome.
ERP119169Modulation of tRNA methylation tRNATrp by DAP
ERP119174Ancestral hybridisation facilitated species diversification in the Lake Malawi cichlid fish adaptive radiation
ERP119177Dama dama transcriptome
ERP119178Baboon_Ancient_African_genomes
ERP119180Analysis of study genetic diversity, demography and neo-sex chromosomes in the Raso lark Alauda razae and its relatives the Eurasian Skylark A. arvensis, Oriental skylark A. gulgula and crested lark Galerida cristata, based on RAD-seq analysis.
ERP119181Gut microbiomes of household pets in the United States
ERP1191872,6-Diaminopurine as a highly potent corrector of UGA nonsense mutations
ERP119189Microbial community composition from the ENVISION project
ERP119191Diversity of Saccharomyces cerevisiae isolated from sourdough
ERP119192Campylobacter jejuni isolated from chicken
ERP119194Nucleolus-associated chromatin domains are maintained under heat stress, despite nucleolar reorganization in Arabidopsis thaliana
ERP119205Reference genome for cabbage obtained with SMRT
ERP119207Reference genome for cabbage
ERP119208Campylobacter coli isolated from chicken,
ERP119211Comparative genomics shows differences in the electron transport and carbon metabolic pathways of Mycobacterium africanum relative to Mycobacterium tuberculosis and suggests an adaptation to low oxygen tension
ERP119213RNA-sequencing of dorsomedial striaum in male Drd2 flox/flox (WT) and Drd2 flox/flox ChAT-Cre+/- (ChI-D2RKO) mice treated with saline or 20 mg/kg of cocaine (ip) 1 hour prior to dissection
ERP119215Candida pellucida A.M. Glushakova, M.A. Tomashevskaya & Kachalkin, sp. nov. - new yeast species associated with Exomias pellucidus
ERP119220CTSK gene polymorphism
ERP119226Chromomeres represent universal units of chromatin packaging in lampbrush chromosomes. To extend our knowledge on chromomere organization, we applied microdissection to chicken lampbrush chromosomes. In particular, 31 and 5 individual chromomeres were dissected one by one along the macrochromosome 4 and one microchromosome, respectively. The data on genomic context of individual chromomeres was obtained by high-throughput sequencing of the corresponding chromomere DNA.
ERP119229test_workshop_study
ERP119233Role of CX3CR1 in osteoclast differentiation in mice
ERP119243Heritability and correlations among learning and inhibitory control traits in common pheasants (Phasianus colchicus)
ERP119244Seasonal iron biogeochemical cycle in a bioturbated intertidal mudflat
ERP119245Eukaryotic composition_ENVISION project
ERP119246Human Genome Structural Variation Sequence and Assembly
ERP119263RNA-seq samples of ten tissues for B73 abnormal 10 (B73_Ab10)
ERP119264Atrial Myxomas Arise From Multipotent Myxoid Cardiac Stem Cells
ERP119265A 51-bp indel in the first intron of the chicken PTH1R gene.
ERP119266Environmental heterogeneity ruling the action of ecological processes over the bacterial metacommunity assembly
ERP119268Effects of increased intracellular calcium and overnutrition on pancreatic beta cell transcriptome
ERP119271Characterization of genotypic PZA resistance in Swedish clinical Mycobacterium tuberculosis isolates.
ERP119273Genome-wide CRISPR knockout screen in Huh7.5.1 human hepatocytes for the identification of host factors of hepatitis A virus
ERP119275Mapping resistance to Fusarium head blight by genome wide association study and linkage analysis
ERP119283Characterisation of the rhizosphere microbiota of Biserrula pelecinus L. across a two-season legume-cereal rotation
ERP119285Clostridium aceticum RNA-Seq and Ribo-Seq
ERP119286Clostridium drakei Ribo-Seq
ERP119289The present study aims to confirm the role of faecal microbiome in a large cohort of PD patients, focusing on the evaluation of a possible specific independent effect of antiparkinsonian medications. To date, no study has assessed the effect of Levodopa (LD) infused directly in the intestine (Levodopa-carbidopa intestinal gel, Duodopa) on gut microbiome. Thus we aimed at identifying the possible effect of LD and its intraduodenal infusion (Duodopa) in modifying gut microbiome composition.
ERP119298Predictions of phenotypic and genotypic adaptations in Pseudomonas aeruginosa biofilms following long-term exposure to an alginate oligomer inhalation therapy
ERP119306Contrasting population evolution of Sitobion avenae and Sitobion miscanthi in England and China
ERP119308RNA-Seq of roseoflavin producer Streptomyces davaonensis reveals transcription of unusual high number of riboflavin biosynthetic genes (rib genes) in exponential and stationary growth phase
ERP119309Single cell RNA-Seq of wild type and caspase inhibitor treated mouse embryos at the stage E6.5
ERP119310Genomic analyses of experimental hybrids
ERP119313Sequence of the cos-npt region of pVK100
ERP119317Re-sequencing of the broad host-range IncP-alpha plasmid pRK404
ERP119318Selection of antigen loss variants during melanoma T-cell therapy
ERP119319Toxoplasma gondii ACL and ACS - contribution to subcellular acetyl-CoA pools
ERP119321Feasibility of anaerobic digestion for the treatment of low-temperature dairy wastewater
ERP119322RNA of Small Cell Lung Cancer Circulating Tumour Cells Derived Explants
ERP119323High Confidence Fetal Sex Determination from Non-Invasive Prenatal Testing Low Coverage Semiconductor Sequencing Data
ERP119325Prospective whole genome sequencing analysis reveals spread of a vanB carrying transposon among different vancomycin-resistant Enterococcus faecium clinical isolates in a non-endemic setting
ERP119327Bacteroides transplantocaccae genome
ERP119329Development of an HRM protocol on wzi gene for fast Klebsiella pneumoniae typing.
ERP119330Pseudomonas timonensis genome
ERP119331Minibacterium timonense genome
ERP119332Pseudomonas provencensis genome
ERP119334Dietzia massiliensis genome
ERP119335Bhargavaea massiliensis genome
ERP119338Acinetobacter kempfi genome
ERP119339Virgibacillus doumboensis genome
ERP119342Production of lumpfish in RAS with distinct water treatments: Effects on fish survival, growth, gill health, and microbial communities in rearing water and biofilm
ERP119343RNA-seq of Nematostella POU4 mutants at primary polyp stage
ERP119346Evaluation of single nucleotide polymorphisms in the ITGAM, BLK, BANK1, IL-17A, VEGFA genes and their association with susceptibility and severity in patients with systemic lupus erythematosus and rheumatoid arthritis
ERP119347Prokaryotic composition_ENVISION project
ERP119353Rhizosphere samples were collected from five Sorghum bicolor cultivars and included both 16S and ITS illumina amplicon sequencing.
ERP119354Gene expression (RNA-Seq) in dorsal striatum of mice with positive and negative social experience
ERP119356Pantoea stewartii subspecies stewartii strain SQT1
ERP119357A method for reconstructing the structure of double-stranded DNA fragments on a single molecule level and its application to Neanderthal DNA
ERP119360P. vivax isolates, Illumina sequencing
ERP119361Epidemiology of human adenoviruses in hospitalized patients in Switzerland
ERP119362Total RNA was isolated from cultures after antibiotics treatment using Tri-Reagent (Sigma). After additional DNAse digestion, RNA samples were depleted for eukaryotic and bacterial rRNAs by subsequent usage of the Yeast Ribo-Kit and the gram-negative bacterial Ribo-Zero Kits (Illumina). After additional depletion of poly(A) RNAs, directional RNA libraries were generated from the left-over RNA using the NEB ultra directional RNA library prep Kit (NEB).
ERP119366Methanol based chain elongation with acetate to n-butyrate and isobutyrate at varying selectivities dependent on pH
ERP119367Propionic acid promotes the virulent phenotype of Crohn's disease-associated adherent-invasive Escherichia coli
ERP119369Ancient genome-wide DNA from France highlights the complexity of interactions between Mesolithic hunter-gatherers and Neolithic farmers
ERP119373RNA-seq of atspf30-1 vs Col-0 seedlings grown in LL conditions.
ERP119374EMG produced TPA metagenomics assembly of PRJNA530103 data set (Viral metagenome groundwater aquifer).
ERP119376Characterising the core microbiota of the sandfly Phlebotomus argentipes using next-generation sequencing
ERP119377Detection of an HLA-B*15:220
ERP119379Detection of an HLA-C*15:13:01
ERP119380Biofilm microalgae
ERP119381Biofilm microalgae
ERP119382Meiotic cohesin, chromatin and expression profiling of Arabidopsis thaliana floral buds from wild type and non-CG DNA methylation/H3K9me2 pathway mutant plants (ChIP-seq)
ERP119397Mutational Analysis Revealed Polymorphic Variants in Exon 3 and Exon 4 of p53 Gene in Cervical Cancer
ERP119399GESTALTOMICS: A PROOF OF CONCEPT IN THE STUDY OF SCHIZOPHRENIA
ERP119401Chitosan and tannins as efficient alternatives to antibiotics on sheep cheese rind
ERP119402Commensal epitopes drive differentiation of colonic Tregs
ERP119404Cardiac mitochondrial function depends on BUD23 mediated ribosome programming
ERP119405CLONING OF RECOMBINANT PLASMID DNA pBacPAK8-polh- PreS2-S, ENCODING PreS2-S REGION OF HEPATITIS B VIRUS (HBV) IN BACULOVIRUSES
ERP119407Identification of genes involved in pollen development in wheat
ERP119410Gene expression during bacterivorous growth of a widespread marine heterotrophic flagellate
ERP119414A Randomized, Double-blind Placebo-controlled Trial to Improve Clinical Indicators in a Population with Functional Constipation
ERP119420Characterization of rat ILCs reveals ILC2 as the dominant intestinal subset
ERP119421A novel A allele at the ABO gene locus characterized by duplication of 21 bp identified in Polish individuals with a weak A and normal B subgroup phenotypes
ERP119422CLONING OF RECOMBINANT PLASMIDS pPIC3.5-S AND pPIC9-S ENCODING THE S REGION OF THE HUMAN HEPATITIS B VIRUS (HBV)
ERP119423Whole genome sequecing of Candida albicans ketoconazole tolerant mutants
ERP119424Transcriptome analysis of aneuploid and euploid Candida albicans strains
ERP119425Effects of domestication on the gut microbiota parallel those of human industrialization
ERP119433Detection of an HLA-A*24:02:31
ERP119436chinse healthy integrative omics project
ERP119442The Anopheles gambiae 1000 Genomes Project - Phase 2 AR1
ERP119443RNA-seq of two hybrid mouse embryonic stem cell lines in a competitive environment during pluripotency: comparison between separate and co-culture conditions
ERP119444RNA-seq of coding RNA reveals an oxidative stress response induced by the plant-derived naphthoquinone lapachol in Staphylococcus aureus
ERP119447Amplicon sequencing of Tara Oceans DNA samples corresponding to size fractions for prokaryotes.
ERP119448Amplicon sequencing of Tara Oceans Polar Circle DNA samples corresponding to size fractions for prokaryotes.
ERP119449Amplicon sequencing of Tara Oceans DNA samples corresponding to size fractions for protists.
ERP119450Amplicon sequencing of Tara Oceans Polar Circle DNA samples corresponding to size fractions for protists.
ERP119451Developmental transcriptome of the nematode Rhabditophanes sp. kr3021
ERP119452Multi-omics characterization of the 4T1 murine mammary gland tumor model
ERP119454RNA-Seq analysis of Medicago truncatula hairy root lines treated with methyl jasmonate
ERP119455Whole genome sequencing data human nontyphoidal Salmonella enterica isolates collected in Armenia
ERP119456Defining the oral microbiome by Whole Genome Sequencing and resistome analysis: the complexity of the healthy picture
ERP119457EMG produced TPA metagenomics assembly of PRJEB34384 data set (Two metagenomes from outflow channels of Lost Hammer ultrasaline, perennial spring from Canadian High Arctic.).
ERP119460hyRAD for herbarium genomics in non-model plant species
ERP11946355 ancient genomes from northeast China
ERP119468Resistome, mobilome and virulome analysis of Shewanella and Vibrio strains isolated in Italian aquaculture centers
ERP119469Draft genome assembly of the Pacific geoduck, Panopea generosa
ERP119470Gut microbiota dysbiosis in patients with acute pancreatitis and acute biliary tract infection
ERP119472WGS analysis of a set of QREC isolates from broilers in Norway
ERP119474Dietary soluble and insoluble fiber with or without enzymes altered the inte stinal microbiota in weaned pigs challenged with F18 Enterotoxigenic E. coli
ERP119475Structure and diversity of the urinary microbiota in relation to gender and age: a cohort study with 1,172 Chinese adults
ERP119477Detection of an HLA-C*07:18:01
ERP119480E.coli evolved in human gut microcosm
ERP119481Cotesia parasitoid wasps and their endogenous viruses: harmonious relationships in an old couple
ERP119483Characterization of primed adaptation in the Escherichia coli type I-E CRISPR-Cas system
ERP119484orchid associated bacteria
ERP119486Atrial Myxomas Arise From Multipotent Myxoid Cardiac Stem Cells
ERP119488Dynamics of the bacterial gut microbiota during controlled human infection with Necator americanus larvae
ERP119492Beneficial Pythium strains and their effect on plant metabolism
ERP119493ChIP-seq of ASY1 and controls on meiotic-stage floral buds of Arabidopsis
ERP119500Genome sequence data for sequence variance analysis of Vitis vinifera cultivar 'Pinot Noir'
ERP119502Salifodinibacter halophilum gen. nov. sp. nov., a halophilic Gammaproteobacterium in the Salinisphaeraceae family isolated from a Salt Mine in Colombian Andes
ERP119505Detection of an HLA-B*15:56
ERP119508Behçet's disease under microbiotic surveillance? A combined analysis of two cohorts of Behçet's disease patients.
ERP119511Single cell RNA-seq from 10X for a living biobank of ovarian cancer ex vivo models reveals profound mitotic heterogeneity
ERP119515Diversity of bacterial biosynthetic genes in maritime Antarctica
ERP119517Bulk RNAseq on hemocytes from stage 16 embryos and wandering 3rd instar larvae of Drosophila melanogaster
ERP119519Single cell RNA on hemocytes from wandering larvae of Drosophila melanogaster not infested and infested by Leptopilina boulardi
ERP119523Whole genome sequencing of Saprochaete clavata isolates
ERP119524RNAseq of follicular lymphoma patient samples treated with anti-IgM, DC-SIGN or an isotype control
ERP119528This is a simple test
ERP119535RNASeq was performed from mitotic U2OS osteosarcoma cells that were either unmutated or had been CRISPR/Cas9-modified to carry a homozygous alteration of the genomic region surrounding Serine 2563 of USP9X or that had been transfected with Ctrl or Wt1 siRNA.
ERP119542L-Arg_sow_fecal_micro
ERP119543Transcriptomic analysis of adult skin from 9 Danio species
ERP119544Rapid divergence following a human-mediated introduction: The role of drift and selection
ERP119545Soil microbial communities under different management of pine plantations
ERP119548Microbial community composition in explanted cystic fibrosis (CF) and unused donor lungs
ERP119549Detection of gene fusions in Mycobacterium tuberculosis using a genomics and proteomics approach in combination with the use of custom software
ERP119550Single-cell RNA counting at allele- and isoform-resolution using Smart-seq3
ERP119551Various Methodologies of Microbiota Assessment for Evaluation of Fecal Microbiota Transplantation and for Super-Donor Recognition Gives More Data Than Each Method Separately
ERP119552Effect of taxonomic, phylogenetic and functional identity of plant neighborhood on Medicago trunculata's microbiota
ERP119553Investigation of possible clonal transmission of carbapenemase-producing Klebsiella pneumoniae complex member isolates in Denmark using core genome MLST and National Patient Registry Data
ERP119559Metagenomics assembly of study: PRJEB35315, sample: ERS3967473, run: ERR3661022.
ERP119561Methylation profile of X-chromosome related genes in male breast cancer
ERP119564Identifying crossover locations in Arabidopsis thaliana wild type and asy1 Col-0 × Ws-4 F2 populations using genotyping-by-sequencing
ERP119566Adaptive and demographic processes as drivers of directional gene introgression in Heterobasidion fungal hybrids
ERP119571This study described how to generate accurate and complete genome from metagenomic datasets.
ERP119572Characterization of nematodes associated with bark
ERP119573Whole genome sequences of Listeria innocua from a poultry production chain in Egypt
ERP119575Transcriptomic effect of extracellular protein aggregation regulators in C. elegans
ERP119576Hand soap contamination by Pseudomonas aeruginosa in a tertiary care hospital: whole genome sequencing ruled out any impact on patients
ERP119577Identifying crossover locations in Arabidopsis thaliana asy1/+ Col × Ler F2 populations using genotyping-by-sequencing
ERP119586Analysis of planktonic fungi during spring phytoplankton bloom at Helgoland Roads (German Bight, North Sea) in 2017
ERP119594MinION DNA barcoding wildlife samples
ERP119599Pathogenic characteristics of a fish-derived Enteroaggregative
ERP119604Structure and functions of hydrocarbon-degrading microbial communities in bioelectrochemical systems
ERP119605Investigations on a possible phytoplasma disease on sweet pepper from the countryside of Senise, Basilicata Region, southern Italy.
ERP119607Novel cisAB allele of the ABO gene with c.796A>C SNP in three Polish individuals
ERP119609Establishment and Characterization of a Brca1-/-, P53-/- Mouse Mammary Tumor Cell Line
ERP119610Crop rotation mesocosm experiment, Lüneburg, Germany
ERP119611Bacterial community composition in the phyllosphere of Acer pseudoplatanus L., Quercus robur L., and Tilia cordata MILL. in a floodplain hardwood forest in Central Germany (Leipzig)
ERP119612Study of soil acidification and nitrogen loading effect on soil microbial communities, Nacetín experimental site
ERP119616DNA sequences of bHLH genes
ERP119618Validation samples for demultiplexing scRNAseq data by genotype in mixed genotype single cell RNAseq experiments without reference genotypes.
ERP119620sequence
ERP119621Population genomics of wild-caught Trichogramma evanescens for pooled sequencing analysis
ERP119622Degradome sequencing of Brassica napus root samples to characterize the infection with Verticillium longisporum
ERP119623Genome sequencing of the plant parasitic nematode Meloidogyne enterolobii
ERP119624CDS Sequences of bHLH genes
ERP119631Corynebacterium glutamicum GlxR suppressor mutant of adenylate cyclase (cyaB) deletion strain
ERP119635PacBio genome analysis and assembly of V. parvula SKV38
ERP119641Microbial community of the geothermal soils of Pantelleria
ERP119642Characterisation of five high lipase-producing bacterial strains isolated from fat, oil and grease deposit blockages in sewers ("fatbergs")
ERP119651Similarity of Gut Microbiota Composition between Donor and Recipient May Predict Graft Function after Transplant
ERP119658Investigating the epithelial barrier and immune signatures in the pathogenesis of equine IBH
ERP119659The role of whole genome sequencing in characterizing the mechanism of action of antituberculosis compounds: the case of para-amino salicylic acid
ERP119666Global Malaspina 2010 Vertical Profiles (18S-V9)
ERP119669Identification of metabolites from halophilic organisms with citotoxic activity.
ERP119671Whole genome sequence-based surveillance of Neisseria meningitidis strains in Portugal
ERP119674Type 2 diabetes influences bacterial tissue compartmentalization in human obesity
ERP119679Antifungal drug susceptibility, molecular basis of resistance to echinocandins and molecular epidemiology of fluconazole resistance among clinical Candida glabrata isolates in Kuwait
ERP1196862019_nCoV coronavirus data set. Collection of new coronavirus samples and assembly sequences. Data first released by CNGBdb (https://db.cngb.org/search/project/CNP0000881)
ERP119688Investigations on a possible phytoplasma disease on sweet pepper from the countryside of Senise, Basilicata Region, southern Italy.
ERP119691NET-seq of S. cerevisiae cells after knocking-out genes encoding various mRNA decay factors
ERP119693Investigations regarding the apple decay in Val d'Agri area - Basilicata Region.
ERP119699Bifidobacterium bifidum suppresses gut inflammation caused by repeated antibiotic disturbance without recovering gut microbiome diversity in mice
ERP119700Monitoring and mapping of non-native freshwater fish in Norway using eDNA
ERP119708Exome sequencing of PDA30364, a murine pancreatic ductal adenocarcinoma cell line
ERP119710Cyanobacteria from an endolytic microniche in the Río Tinto area
ERP119711Extended-spectrum beta-lactamase and carbapenemase producing Klebsiella spp. from hospital effluents in South Africa
ERP119715Impact of Introns and Homing Endonucleases on Structural Mitogenome Shapping in Hypocreales
ERP119718The belowground bacterial and fungal communities differed in their significance as microbial indicator of Moroccan carob habitats
ERP119720Lactose-fermenting Salmonella France 2019
ERP119721CDS Sequences
ERP119722CDS sequences
ERP119723Characterization of Mafa-KIR alleles
ERP119725BCL-2 pathway counteracts aneuploidy in mammalian embryos
ERP119726RNA-seq of WT, Mbd3-/- and rescue hiPSC during neuroectodermal differentiation and of WT and Mbd3-/- in mEpiSC during neuroectodermal differentiation
ERP119727Characterization of mamu-KIR alleles
ERP119729Effect of Tcf7l2 Knockout in the development and identity of Mouse brain Thalamus at embryonic stage E18.5 and P60
ERP119731Ancient genomes from present-day France unveil 7,000 years of its demographic history.
ERP119734Vibrio sp. genomes isolated from the Bay of Biscay
ERP119736Metabolic versatility and different drought survival strategies in biologic soil crust microorganisms revealed by population-resolved metagenomics
ERP119738souporcell__Robust_clustering_of_single_cell_RNAseq_by_genotype_without_reference_genotypes
ERP119739muegge_mammals_16S_Illumina
ERP119743Fonio millet genome unlocks African orphan crop diversity for agriculture in a changing climate
ERP119746A subterranean species of Exocelina diving beetle from the Malay Peninsula filling a 4,000 km distribution gap between Melanesia and S China
ERP119747Iron-acquisition systems in Salmonella Enteritidis
ERP119748Evolution and population dynamics of CC152 community-acquired methicillin-resistant Staphylococcus aureus
ERP119757The origin and widespread occurrence of Sli based self-compatibility in potato
ERP119760WGS Miseq analysis of Leptospira serogroup Pomona genomes circulating in Northern Italy
ERP119762Early sexual dimorphism in the developing gut microbiome of northern elephant seals
ERP119772Whole-genome sequencing of multidrug-resistant gram-negative pathogens carried by houseflies in a tertiary Rwandan hospital
ERP119775Two main mutational processes operate in the absence of DNA mismatch repair
ERP119777RNA-seq data
ERP119788Salmonella Dublin France 2019
ERP119789GENOME SEQUENCING OF ARATINGA SOLSTITIALIS
ERP119793Generation of a high quality reference genome for the African buffalo (Syncerus caffer) to understand the genomic variation across Syncerus caffer sub-species. We provide the first high quality genome assembly of the African buffalo based on a combination of PacBio (60X), Illumina (75X) and Hi-C libraries for scaffolding.
ERP119794RNA-seq samples from Syncerus caffer generated from distinct tissues.
ERP119795Iso-seq samples from Syncerus caffer generated from distinct tissues
ERP119800Development of genetic tools for managing populations of the southern white rhinoceros (Ceratotherium simum)
ERP119802Geomicrobiology of secondary mineral deposits from underexplored lava tubes from Galapagos Islands (Ecuador)
ERP119806A haplotype-resolved, de novo genome assembly for the wood tiger moth (Arctia plantaginis) through trio binning
ERP119811Antimicrobial activity in Pediococcus pentosaceus bacteria and enhancement of Tenebrio molitor larval growth and survival as a dietary supplement
ERP119812cpDNA sequences (atpIH) of Astragalus onobrychis
ERP119814Chryseobacterium morensis strain F3-Prior genome
ERP119820Genomic analysis and antimicrobial resistance determinants in Neisseria gonorrhoeae isolates with decreased susceptibility and resistance to extended-spectrum cephalosporins in Argentina, 2011 to 2016
ERP119824Modified-zeolite-supported biofilm in service of pesticide biodegradation
ERP119827Listeria fournierii genome
ERP119828Agromyces massiliensis genome
ERP119829Chelativorans massiliensis genome
ERP119830Halobacillus pseudomassilliensis genome
ERP119836High quality draft genome sequence of Daldinia concentrica
ERP119837High quality draft genome sequence of Entonaema liquescens
ERP119838Modified-zeolite-supported biofilm in service of pesticide biodegradation
ERP119843cpDNA sequences (rpL16) of Astragalus onobrychis
ERP119845Deoxygenation over coral reefs triggers bleaching and microbial community shift
ERP11985116S-Illumina sequencing of a enriched consortium of bilge microorganisms with breaking ability for oily wastewater treatment
ERP119853Temperature modulates stress response in anammox reactors
ERP119855Propionate conversion in Aarhus Bay enrichments
ERP119859cpDNA sequences (ycf1) of Astragalus onobrychis
ERP119863High quality draft genome sequence of Hypomontagnella monticulosa
ERP119864EColiK12MG1655 Nanopore R10.3 release
ERP119865Marine bacterial strain studied for the ability to degrade different plastics structure
ERP119866Gene-flow from steppe individuals into Cucuteni-Trypillia associated populations indicates long-standing contacts and gradual admixture
ERP119869High quality draft genome sequence of Hypomontagnella submonticulosa
ERP119870High quality draft genome sequence of Hypoxylon fragiforme
ERP119872High quality draft genome sequence of Hypoxylon lienhwacheense
ERP119874High quality draft genome sequence of Hypoxylon pulicicidum
ERP119875Single molecule structure sequencing reveals RNA structural dependencies, breathing and ensembles
ERP119876High quality draft genome sequence of Hypoxylon rickii
ERP119882AM fungi of different wheat cultivars grown in organic and conventional soils.
ERP119889Structure and diversity of the urinary microbiota
ERP119892Three new hoverfly species from Greece (Diptera: Syrphidae)
ERP119895Dual-locus DNA metabarcoding reveals southern hairy-nosed wombats (Lasiorhinus latifrons Owen) have a summer diet dominated by toxic invasive plants.
ERP119898Yellow sea mediated segregation between North East Asian Dryophytes species
ERP119899Staphylococcus argenteus as an etiological agent of prosthetic hip joint infection: a case presentation
ERP119900A fatal outbreak of hypervirulent and multidrug resistant clone (ST2096) of Klebsiella pneumoniae silently transmitting in a Saudi Arabia western region hospital: a clinical and molecular surveillance study
ERP119905Complete Genome Sequence of a Bovine Viral Diarrhea Virus 1, Subgenotype 1c, strain CRL/154/09
ERP119914Complete Genome Sequences of hepatitis E virus, genotype 3
ERP119915High quality draft genome sequence of Hypoxylon rubiginosum MUCL52887
ERP119916High quality draft genome sequence of Pyrenopolyporus hunteri
ERP119917High quality draft genome sequence of Xylaria hypoxylon
ERP119918This study describes the assembly of the genome of Peronospora effusa Race 1
ERP119923Population Genomics of Zosterops borbonicus
ERP119927Metagenome from petroleum waste-waters
ERP119929Structure and diversity of the urinary microbiota in relation to gender and age: a cohort study with 1,172 Chinese adults
ERP119935Draft genome sequence of Candidatus Frankia nodosporulans UmASt1
ERP119936Draft genome sequence of Candidatus Frankia nodosporulans UmASH1
ERP119938Dietary cardoon meal modulates the rumen biohydrogenation and bacterial community in lambs
ERP119941SNP data of B. anthracis isolates
ERP119946Genome wide identification of SNPs in rohu
ERP119947Outbreak of linezolid-resistant isolates in France with evidence of inter-species transfer of cfr-positive plasmid in several Staphylococcus aureus clones and one of the multidrug-resistant worldwide-disseminated “Australian” S. epidermidis clones.
ERP119952Gut microbiome predicts efficacy and immune-related toxicities of advanced non-small cell lung cancer patients treated with anti-PD-1/PD-L1 Ab-based immunotherapy
ERP119963Unraveling the complexity of soil microbiomes in a large-scale study subjected to different agricultural management in Styria
ERP119969Whole genome sequencing of Lactobacillus plantarum CECT 9491
ERP119972Nanopore-based, chromosome level, assembly of the Small Tree Finch (Camarhynchus_parvulus)
ERP119976RNA-seq of P. thermoglucosidasius DSM 6285 cultivated under gas atmosphere of 50% CO and 50% air
ERP119982Aphantopus hyperantus (ringlet butterfly) genome assembly, iAphHyp1, alternate haplotype
ERP119983Aphantopus hyperantus (ringlet butterfly) genome assembly, iAphHyp1
ERP119985RNA-SEQ analysis of KMC murine pancreatic ductal adenocarcinoma (PDAC) cell line upon siRNA depletion of MYC, KRas or Miz1 (aka Zbtb17)
ERP119988Settlement and spreading of the introduced seaweed Caulacanthus okamurae (Rhodophyta) in the Mediterranean Sea
ERP119992Temporal and spatial dynamics of peat microbiomes in drained and rewetted soils of three temperate peatlands
ERP119993Spatial distribution of benthic microbial assemblages in a coastal upwelling ecosystem off Atacama Desert (23° S), northern Chile
ERP120010Airway Microbiota-Host Interactions Regulate Secreted Leukocyte Proteinase Inhibitor Levels and Influence Allergic Airway Inflammation
ERP120013Replication landscape of the S. cerevisiae genome by nanopore sequencing
ERP120014RNA-SEQ analysis of pancreatic ductal adenocarcinoma tumours in Pdx1-Cre;lsl-KRas[G12D] (KC), Pdx1-Cre;lsl-KRas[G12D];Rosa26-lsl-MYC[DM] (KMC), Pdx1-Cre;lsl-KRas[G12D];Rosa26-lsl-MYC[DM];c-Myc[fl/+] (KMC-Mycfl/+), and Pdx1-Cre;lsl-KRas[G12D];Rosa26-lsl-MYC[DM];Zbtb17[fl/fl] mice (KMC-Miz1fl/fl)
ERP120015Whole Genome Sequencing comparative study of Salmonella enterica serovar Infantis German isolates from broiler farms collected during two distant decades.
ERP120016Pseudomonas kaiseriensis sp nov, isolated from Rainbow Trout
ERP120018Gene expression analysis of 83A25-stimulated EL4 cells
ERP120021Mitochondrial horizontal transfer in canine transmissible venereal tumour (CTVT)
ERP120022Genomics in bacterial taxonomy: impact on the genus Pseudomonas
ERP120023Gene expression analysis of 83A25-stimulated Jurkat.Emv2env cells
ERP120024E.coli in poultry
ERP120025V3-V4 16S rRNA amplicons obtained from communities and transconjugants (ie. bacteria able to receive fluorescent tagged model plasmids) of groundwater fed rapid sand filters in Denmark.
ERP120034Blueberry proanthocyanidins and anthocyanins improve metabolic health through a gut microbiota-dependent mechanism in diet-induced obese mice
ERP120038Assembly of 2 field vole (Microtis agrestis) genomes by linked reads
ERP120041Strand-specific nuclear RNA-sequencing from left ventricular human heart tissue from control and hypertrophic individuals.
ERP120048Exome-wide association study reveals largely distinct gene sets underlying specific resistance to dengue virus types 1 and 3 in Aedes aegypti
ERP120053RNA-Seq of enteroids from wild-type and Tnfaip8 knockout mice.
ERP120058Investigating the health status and microbiota in members of the Irish Travelling community
ERP120063Discover new allele of HLA DRB1*11 in Taiwan
ERP120065Human and canine interactions shape the skin and fecal microbiome in an environment dependant manner
ERP12006718S metabarcoding background fauna hydrothermal vent Rainbow
ERP120074Prokaryotic Community Profiling of the Mt. Makiling Mudspring
ERP120079Cellular plasticity in response to suppression of storage proteins in the Brassica napus embryo
ERP120082Microbial communities and the putative interactions of methanogens with nitrogen oxides in diverse peatlands of the Amazon basin
ERP120083Genomic sequences of Clostridioides difficile detected in chicken, soil and human samples from Zimbabwe
ERP120093Patterns of (trace) metals and microorganisms in the Rainbow hydrothermal vent plume at the Mid-Atlantic Ridge
ERP120094metagenomics NGS for identification of prosthetic joint infection pathogens
ERP120097Sequencing genomes of 35 strains of Streptococcus thermophilus by hybrid assembly (ILLUMINA + Nanopore MinION)
ERP120106RNA-seq analysis of bone-marrow derived macrophages from wild type and LRRK2 knockout mice activated by LPS or MDP.
ERP120111MONITORING BIOLOGICAL SOIL CRUST REACTIVATION BY FLOW CYTOMETRY AND METAGENOMIC ANALYSIS OF ITS VIRAL COMMUNITY
ERP120113GBS Sequencing Data from the same Australian rabbit population taken 16 years apart
ERP120120The Effects of Thirdhand Smoke Exposure on the Microbiome of Young Children
ERP120126Detection of an HLA-DQB1*05:66
ERP120127Detection of an HLA-DQB1*06:132
ERP120130Discover new allele of HLA A*02 in Taiwan
ERP120134Hidden heterogeneity and co-occurrence networks of soil prokaryotic communities revealed at the scale of individual soil aggregates - experiment 1
ERP120136Hidden heterogeneity and co-occurrence networks of soil prokaryotic communities revealed at the scale of individual soil aggregates - experiment 2
ERP120140Hidden heterogeneity and co-occurrence networks of soil prokaryotic communities revealed at the scale of individual soil aggregates - experiment 3
ERP120142Genome sequencing of coevolved and evolved Stenotrophomonas maltophilia strains
ERP12014430X whole genome sequencing coverage of 698 samples to complete trios in Phase 3 1000 Genome sample set
ERP120147Shotgun whole genome sequencing of several Dipterocarpaceae from Thailand
ERP120152SMRT technology was used to detect motifs and modifications in several Bcc members, as well as to investigate methylation patterns in B. cenocepacia strain H111.
ERP120162Taxon appearance from extraction and amplification steps demonstrates the value of multiple controls in tick microbiota analysis
ERP120179Molecular characterisation and phylogenetic inference of, Dermanyssus gallinae within an European framework
ERP120187Impact of aggregate size and clay content on the bacterial community structure in soil microaggregates and macroaggregates of a clay catena
ERP120188RNA-seq of the spliced products from a mutated minigene reporter library under control and different knockdown conditions in HEK293T cells
ERP120190New sequences of ITS, rpb2, tef1 and tub2 are provided for the new species of Tintelnotia
ERP120192Biodiversity and seasonality of the whole community of planktic protists in the epilimnetic layer of a large and deep perialpine lake (Lake Garda) (HTS methods; MiSeq).
ERP120194Biological activates of fermented Aloe arborescence juice
ERP120204RNA and miRNA sequencing of extracellular vesicles derived from murine Th1 and Th2 differentiated cells
ERP120210Blueberry proanthocyanidins and anthocyanins improve metabolic health through a gut microbiota-dependent mechanism in diet-induced obese mice
ERP120214CUL3-mRNASeq
ERP120217Hybrid assembly of optrA Positive Enterococcus faecalis
ERP120237Fibroblast Growth Factor 19 modulates intestinal microbiota and inflammation in presence of Farnesoid X Receptor
ERP120241Impact of dietary fibre and chromium picolinate on satiety, satiation, weight loss and gut microbiome composition in overweight and obese women
ERP120243Microbial resource management for ex situ biomethanation of hydrogen at alkaline pH
ERP120247Brachypodium responses to endophytes and abiotic stress (N and simulated drought)
ERP120254Complete genome sequencing of recombinant ASFV.
ERP120255Recent research has demonstrated that supplementing swine feed with fiber-degrading enzymes has considerable potential to improve feed utilization and animal performance. Most of the research is focused on how the enzymes affect the physical status of the feed, such as digesta viscosity, solubility and insolubility. However, few studies have focused on whether, and if so how, they influence the gut microbiota. The aim of current study was to investigate whether fermentation of rapeseed meal (RSM) which was modified by a cellulase, two pectinase, or alkaline treatment was improved by the swine gut microbiota compared to untreated RSM, and whether the microbiota composition was changed.
ERP120258The aim of the study was to investigate the effect of non- and modified rapeseed meal (RSM) on pig gut microbiota during adaptation period by swine large intestine in vitro model (SLIM).
ERP120265Microbial community analysis in the food samples
ERP120268RNA-Seq of M. m. domesticus males from France
ERP120274Investigations of a degradation phenomena observed on monuments and mural paintings from Matera district ("Sassi of Matera") located in Basilicata Region (Southern Italy).
ERP120283mRNAseq of kefir species Lactobacillus kefiranofaciens and Leuconostoc mesenteroides as well as Lactococcus lactis and Acetobacter fabarum
ERP120284Mosaic MSA
ERP120290Paleolithic to Bronze Age Siberians reveal connections with First Americans and across Eurasia
ERP120303Identifying frailty-associated markers in Elderly Irish Individuals
ERP120304Multi-omics characterization of MEK inhibitor resistant pancreatic cancer based on a genetically engineered mouse model-derived in vitro system
ERP120318trial samples of a study in the Venice Lagoon
ERP120333Metagenomic characterization of indoor dust bacterial and fungal microbiota in homes of asthma and non asthma patients using next generation sequencing
ERP120335Microbial community composition of laboratory incubations of marine sediment in overlying aerated seawater
ERP120339Metagenomic characterization of indoor dust bacterial and fungal microbiota in homes of asthma and non asthma patients using next generation sequencing
ERP120340An assessment of a climate induced increase in soil water availability for soil bacterial communities exposed to long-term differential P fertilisation
ERP120344Prospective study for microbial bio compounds from subterranean environments
ERP120345PROBIOMA
ERP120351First case of IMP-15-producing Pseudomonas aeruginosa in Switzerland
ERP120355Unraveling the microbiota of Kalamata fermented olives through amplicon-based metagenomic analysis
ERP120356Gene expression analysis of subcutaneous adipose tissue in mice fed with a low-protein/high carbohydrate diet
ERP120357We investigated the transcriptional network of OsRKD3 in black rice using a dexamethasone inducible two-component system. We carried out an RNAseq experiment with three conditions; indOsRKD3 + dexamethasone, indOsRKD3 + mock, and WT + dexamethasone.
ERP120359The genomes of Tropheus moorii and Petrochromis trewavasae in comparison.
ERP120361RCT to determine whether increased fruit and vegetable intake reduces asthma symptoms and microbiology in children with asthma
ERP120364MinION sequencing of PAO enrichment bioreactor community fed with alternative carbon sources
ERP120368Long-term survival of E745
ERP120376Intestinal bacteria recognized by serum IgG from patients with Inflammatory bowel disease
ERP120378Transcriptome profiling of NGLY1 deficient K562 cells
ERP120380The mobilome of Dichotomius (Luederwaldtinia) schiffleri
ERP120383Alcohol tolerance in E. faecium
ERP120386Emergence of high-level and stable metronidazole resistance in Clostridioides difficile.
ERP120389Impact of mountaintop coal mining on aquatic biodiversity - Multikingdom monitoring using eDNA sequencing
ERP120392HLA typing for donor registry
ERP120393IL-34-differenciated CD14+CD115+ monocytes expand and potentiate IL-34+ Tregs to control human transplant rejection
ERP120394HLA typing for donor registry
ERP120395Incidence and diversity of torix Rickettsia –Odonate symbioses
ERP120396HLA typing for bone marrow donor registry
ERP120397The NCI is generating PDMs from primary and metastatic tumor tissues and blood specimens supplied by NCI-supported clinical trials and NCI-designated Cancer Centers and will provide these models to the research community. These models will include a limited amount of patient data including previous clinical therapies, smoking history, and race/ethnicity and will have representative sequence for a sub-set of PDXs for a targeted gene panel, whole exome, and RNASeq.
ERP120400Single cell profiling of human induced dendritic cells generated by direct reprogramming of embryonic fibroblasts
ERP120407RNAseq of MTEC (mouse tracheal epithelial cells) during 0, 4 and 7 days in ALI
ERP120411Whole-genome sequences of extinct and living lions revealed their population history, with special emphasis on characterising the evolutionary relationships between cave and modern lions. We also assessed the genetic heterozygosity in different present-day lion populations.
ERP120414Complete genome sequence of Thermococcus sp. 2319x1 strain Essen
ERP12041516S rRNA gene sequences from lichen samples
ERP120418snRNA-seq of whole hearts from adult BL6 mice
ERP120419Single-cell RNA-seq of tumor-infiltrating lymphocytes in metastatic uveal melanoma
ERP120423Full genome sequencing of Arabidopsis halleri
ERP120429Revision of the acidophilic genus Acidiella (Dothideomycetes, Capnodiales) with a description of new species from Poland
ERP120436Genetic characterization of ancient European chestnut trees (Castanea sativa Mill.) assessed through chloroplast DNA sequence and nuclear SSR in Central and Southern Italy
ERP120438Microbiological cycling ofmethane and Nitrogen in a wastewater treatment plant in The Netherlands
ERP120439Genome diversity and quorum sensing variations in laboratory strains of Pseudomonas aeruginosa PAO1
ERP120440Strain from routine IMD surveillance in Belgium
ERP120441Bacterial root communities in sugar beets grown in potting soil and vermicompost
ERP120442The transcription dynamics in Actinoplanes sp. SE50/110 during growth.
ERP120443Larval density affects phenotype and surrounding bacterial community without altering gut microbiota in Drosophila melanogaster
ERP120454Co-occurrence of benzylpenicillin-producing Trichophyton erinacei and methicillin resistant Staphylococcus aureus carrying the mecC gene on Europeaus erineaus (European hedgehog)
ERP120464Co-occurrence of benzylpenicillin-producing Trichophyton erinacei and methicillin resistant Staphylococcus aureus carrying the mecC gene on Europeaus erineaus (European hedgehog)
ERP120466Spatio-temporal immune zonation of the human kidney
ERP120467Profiling of CD34+ cells from human bone marrow to understand hematopoiesis
ERP120471Microorganisms in the Yellow River Delta
ERP12048016srRNA gene sequencing to identify bacterial pathogens in blood from infective endocarditis patients
ERP120483Estrogen receptor beta inhibits cholesterol biosynthesis through overexpression of mir-181a-5p in Triple Negative Breast Cancer
ERP120496Oxford Nanopore sequencing of polioviruses and non-polio enteroviruses
ERP120499Cloning of wheat leaf rust resistance gene LrLC10
ERP120504RNAseq on PBMC of three patients with Familial Hemophagocytic Lymphohistiocytosis Type 5 (FHL5) and three age and sex-matched controls
ERP120505RNA sequencing of primary isolated unstimulated murine splenic cDC from specific pathogen free (SPF), Germ Free (GF) and Interferon alpha/beta receptor 1 (Ifnar) knock out mice.
ERP120506RNA sequencing of primary isolated unstimulated murine splenic DC1 and DC2 from specific pathogen free (SPF), Germ free (GF) and Interferon alpha/beta receptor 1 (Ifnar) knock out mice
ERP120510A longitudinal study of the oral microbiome during the onset and resolution of experimentally-induced gingivitis
ERP120511This dataset includes a total of 20 whole genome sequencing data from goats (AGIN-USDA). It has been uploaded for the VarGoats Consortium (http://www.goatgenome.org/vargoats.html). To use this dataset please contact: Emily.Clark@roslin.ed.ac.uk or gwenola.tosser@inrae.fr or Ben.Rosen@ARS.USDA.GOV or vargoats@inrae.fr
ERP120516Whole genome sequencing of Gram-negative bacteremias from Oxfordshire, UK.
ERP120524Transcriptome comparison ot the most common Pseudomonas aeruginosa clones D421 and F46D
ERP120526A TFG-RET fusion was found in a papillary thyroid carcinoma.
ERP120527Sequences of bacterial Y RNAs
ERP120547Microbial community dynamics across an oceanic front
ERP120551Jiangsu Major Agricultural New Variety Creation Project
ERP120554psiCLIP of SmB, Prp16 and Prp22 in C, C* and P spliceosomal complexes
ERP120556Statin treatment reduces the prevalence of gut microbiota dysbiosis in obese individuals
ERP120559Chromosome-level assembly of A. thaliana accession Col-0 (AT6909) using PacBio sequencing.
ERP120561Differences in Bacterial diversity across indigenous and introduced ruminants in the Qinghai Tibetan plateau
ERP120563Mycobacterium persicum genome
ERP120565Chromosome-level assembly of A. thaliana accession KBS-Mac-74 (AT1741) using PacBio sequencing.
ERP120566Chromosome-level assembly of A. thaliana accession Ty-1 (AT5784) using PacBio sequencing.
ERP120567Chromosome-level assembly of A. thaliana accession Cvi-0 (AT6911) using PacBio sequencing.
ERP120568Chromosome-level assembly of A. thaliana accession Kn-0 (AT7186) using PacBio sequencing.
ERP120569Chromosome-level assembly of A. thaliana accession Ler-0 (AT7213) using PacBio sequencing.
ERP120572Nanopore sequencing and the Shasta toolkit enable efficient de novo assembly of eleven human genomes
ERP120574CHRP-Finder
ERP120577Adaptive mutations associated with cell culture passage of human cytomegalovirus in the presence of neutralizing antibodies.
ERP120578A testing release date - wei - modified
ERP120579Genetic markers in S. Paratyphi C reveal primary adaptation to pigs
ERP120580Salmonella enterica isolated from a spanish (Zamora) poultry farm
ERP120581Salmonella enterica isolated from a spanish (Lerida) poultry farm
ERP120583adasdfadfa
ERP120591Three new species and DNA sequence data of the rare South American water beetle genus Adelphydraena Perkins, 1989 (Coleoptera: Hydraenidae)
ERP120598TKI
ERP120599VSGseq of WT and rad50 mutant parasites following induction of a double strand break
ERP120601An attempt to understand the different abilities to take up a plasmid on a genetic level
ERP120604Chromosomal-level genome assembly of the scimitar-horned oryx: insights into diversity and demography of a species extinct in the wild
ERP120605Severe acute respiratory syndrome coronavirus 2
ERP120606Parental allele identification and gene copy number prediction in aneuploid hybrid species
ERP120610SARS-CoV2 genome sequencing from the first patient identified with COVID-19 in Quito, Ecuador
ERP120611testing project - wei 16/mar/2020
ERP120614Anopheles funestus FUMOZ rp1 (resistance to pyrethroid 1) BAC sequence
ERP120616The role of metal contamination in shaping microbial communities in heavily polluted marine sediments
ERP120618Genome sequence of carbapenemase producing K. pneumoniae clinical isolates
ERP120621The utility of shotgun metagenomics to investigate the carriage of, and longitudinal changes in antimicrobial resistant Streptococcus pneumoniae, in the nasopharynx of South African infants.
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ERP120651Genome sequencing of the endosymbiotic consortium and mitochondrion of Cinara sp. species voucher 3046
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ERP120666Genome sequencing of the endosymbiotic consortium and mitochondrion of Cinara (Cinara) pinimaritimae species voucher 2836
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ERP120671Genome sequencing of the endosymbiotic consortium and mitochondrion of Cinara (Cinara) watanabei species voucher 3293
ERP120672Genome sequencing of the endosymbiotic consortium and mitochondrion of Drepanosiphum platanoidis species voucher 3702
ERP120673Genome sequencing of the endosymbiotic consortium and mitochondrion of Eriosoma grossulariae species voucher 3692
ERP120674Genome sequencing of the endosymbiotic consortium and mitochondrion of Periphyllus testudinaceus species voucher 2671
ERP1206762017 Sir Run Run Shaw Hospital carbapenem resistant Klebsiella pneumoniae
ERP120677Distinctive regulation of carbapenem susceptibility in Pseudomonas aeruginosa by Hfq
ERP120679ddRAD sequencing of Common Whelk, Buccinum undatum
ERP120680Illumina HiSeq 4000 paired end sequencing of Myotis lucifugus individuals and pooled populations
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ERP120689Microbiome of prokayotes of soil and roots of Indian grown three varieties of pigeon pea
ERP120695Long- and short-read metabarcoding technologies reveal similar spatio-temporal structures in fungal communities
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ERP120739Jamestown Canyon virus in Massachusetts
ERP120741Anaerobic respiration pathways and response to increased substrate availability of Arctic wetland soils
ERP120747Skin miceobiome
ERP120748The sources and transmission routes of microbial populations throughout a meat processing facility
ERP120753Tomo-seq of Pristionchus pacificus nematodes
ERP120755Circulating tumor DNA can be detected in the majority of urine and plasma samples from primary brain tumor patients using deep sequencing guided by mutations detected in multi-region tumor biopsies, and by assessing cell-free DNA fragmentation patterns with shallow whole genome sequencing.
ERP120759Sub-species niche specialization in the oral microbiome is associated with nasopharyngeal carcinoma risk
ERP120761Undaria pinnatifida experiment
ERP120762Undaria pinnatifida experiment
ERP120765Impact of woody biochar on dry thermophilic anaerobic digestion
ERP120766WGS of Salmonella Weltevreden in cultured shrimp and tilapia in Vietnam and China. Samples were collected in 2013
ERP120772Planarians culturomics
ERP120779Marked antigen receptor stereotypy in nodular lymphocyte predominant Hodgkin lymphoma: implications for pathogenesis and diagnostics
ERP120787Hypervirulent Klebsiella pneumoniae ST66-K2 infection
ERP120789Vitamin B12 Deficiency Alters the Gut Microbiota in a Murine Model of Colitis
ERP120804Bacteria found inside the placentas isolated from cesarean deliveries under controlled conditions do not constitute a microbiota.
ERP120809DNA barcoding of nematodes using the MinION