| Accession | Title or Alias |
|---|
| ERP123107 | MHs BGA forensic |
| ERP123108 | Targeted insertion for human genome engineering |
| ERP123109 | Whole shotgun metagenomic sequencing from stool samples from calcium oxalate kidney stone formers and healthy control participants |
| ERP123112 | SNPs of bone morphogenetic protein 7 in the razor clam Sinonovacula constricta |
| ERP123113 | Whole-genome sequencing data generated for the remains of four Pleistocene wolf specimens from sites in Northeast Siberia. |
| ERP123121 | Dwarfism in Tibetan Terriers with an LHX3 mutation |
| ERP123124 | Resolving generic limits in Cyperaceae tribe Abildgaardieae using targeted sequencing |
| ERP123125 | This study contains raw paired-end fastq files and pre-processed alignment files (CRAMs) that have been used to study the effect of domestication in various water buffalo breeds |
| ERP123127 | Enrichment of hydrogen oxidizing bacteria from high temperature and salinity environments |
| ERP123128 | Genome sequences of Acinetobacter baumannii from multiple sources and studies |
| ERP123130 | Peg13 regulates sexual preference |
| ERP123132 | Illumina paired end reads of an adult beetle of Chrysochus auratus |
| ERP123138 | Cells of the adult human heart |
| ERP123139 | RNAseq of two contagious cancer cell lines in the Tasmanian devil, Devil Facial Tumour 1 (DFT1) and Devil Facial Tumour 2 (DFT2) |
| ERP123141 | Murine gut microbiome in response to antibiotic exposure and colonization with vancomycin resistant Enterococcus faecium |
| ERP123143 | Understanding the role of CXCL4 in the initiation and progression of bone marrow fibrosis |
| ERP123144 | Wesmaelius (Kimninsia) nervosus (Fabricius, 1793) (Neuroptera, Hemerobiidae) a new species of brown lacewing for the Portuguese fauna |
| ERP123146 | Longitudinal metagenomic analysis of the gut microbiome in preterm infants diagnosed with necrotising enterocolitis and matched controls |
| ERP123149 | Genomic investigation of hominine herpes simplexvirus evolution |
| ERP123156 | temperature effects on aquifer microbial communities |
| ERP123157 | scRNA-seq of mESC and mouse CD4+ cells using different buffers and enzymes |
| ERP123159 | Multi-taxa assessment of microplastics on soil microbiome - Fungi |
| ERP123160 | Diesel exhaust particles alter the composition and function of the gut microbiota upon chronic oral administration in mice |
| ERP123163 | 16S rRNA gene sequencing to identify bacterial pathogens in blood from infective endocarditis patients |
| ERP123164 | Diesel exhaust particles alter the composition and function of the gut microbiota upon chronic oral administration in mice - (C57Bl/6) |
| ERP123166 | Post-meiotic expression of Mkk7 in mouse testis |
| ERP123168 | Guyana |
| ERP123169 | PhylogroupE |
| ERP123171 | Autosomal Genetics and Y-chromosome Haplogroup L1b-M317 Reveal Mount Lebanon Maronites as a Persistently Non-Emigrating Population |
| ERP123173 | SARS-CoV-2 genomes from late April in Stockholm, Sweden |
| ERP123180 | classIIextension-DR10 |
| ERP123181 | Experimental infection supports the potential role of raccoon dogs (Nyctereutes procyonoides) as intermediate host for SARS-CoV-2 |
| ERP123184 | CRISPR tools for zebrafish |
| ERP123189 | Gut microbes in Enshi black pigs |
| ERP123193 | Brachypodium distachyon epigenetic diversity (WGBS and RNA-Seq) |
| ERP123196 | Key role of IRX5 in human ventricular conduction |
| ERP123202 | Study of bacterial community in river sediments before and after effluents of Waste water treatment plants WWTP |
| ERP123206 | Directed evolution of microbial co-cultures for improved production of costly metabolites |
| ERP123207 | Identifying crossover locations in Arabidopsis thaliana sni1 Col-0 x Ct-1 F2 populations using genotyping-by-sequencing |
| ERP123212 | Population_structure_of_Mycobacterium_bovis_in_Southern_Brazil |
| ERP123213 | Comparative Subsequence Sets Analysis (CoSSA) is a robust approach to identify haplotype specific SNPs; mapping and pedigree analysis of a potato wart disease resistance gene Sen3 |
| ERP123214 | SHAPE: Barley cv. Morex CLR assembly |
| ERP123215 | AnTIC: Uro-associated E. coli Genome Analysis |
| ERP123216 | Multi-taxa assessment of microplastics on soil microbiome - Prokaryotes |
| ERP123220 | Effect of Supplementation with Synbotic Ice Cream on the immune response, health in general and parameters related to the gut-brain axis in military submitted to field training |
| ERP123221 | Rapid size change associated with intra-island evolutionary radiation in extinct Caribbean “island-shrews” |
| ERP123222 | Motilimonas cestriensis (strain MKS20) |
| ERP123223 | ZIKV strain sequencing including African strains |
| ERP123225 | MNase sequencing of macronuclei from vegetative Paramecium tetraurelia |
| ERP123227 | Gut microbiome of virally-infected C57BL/6 mice |
| ERP123229 | Effect of Supplementation with Synbotic Ice Cream on the immune response, health in general and parameters related to the gut-brain axis in military submitted to field training |
| ERP123231 | HGSVC JAX Hi-C Data |
| ERP123232 | Gut Microbiomes of European Turkey and Veal Calf Herds |
| ERP123234 | Draft Genome Sequence of Fusarium equiseti K3, a fungal species isolated from Hexachlorocyclohexane (HCH) contaminated soil |
| ERP123235 | Isolation and identification of Predatory bacteria and study of its power of degradability on common burn wound infections |
| ERP123237 | In vivo reporter assays uncover changes in enhancer activity caused by type 2 diabetes associated SNPs |
| ERP123238 | Olive viruses in Albania |
| ERP123239 | Microbiome analysis and predicted relative metabolomic turnover suggests bacterial heme and selenium metabolism are altered in the gastrointestinal system of zebrafish (Danio rerio) exposed to the organochlorine dieldrin |
| ERP123241 | Premature atherosclerosis in a patient with hypertriglyceridemia |
| ERP123242 | In_vivo_CRISPR_activation_screen_to_identify_novel_membrane_proteins_enhancing_pulmonary_metastatic_colonisation |
| ERP123244 | Genetic etiologies of GnRH deficiency |
| ERP123247 | Antibiotic resistome in Swiss river streams |
| ERP123248 | Comparison of the genital microbiomes of pregnant Aboriginal and Non-aboriginal women |
| ERP123249 | WGS reveals a likely long-term prevalent status for a predominant Beijing strain in Colon, Panama |
| ERP123251 | Reprogramming of bone marrow myeloid progenitor cells in patients with severe coronary atherosclerosis |
| ERP123255 | Multi-taxa assessment of microplastics on soil microbiome - Cercozoa |
| ERP123256 | Single cell transcriptome profiling of the Atlantic cod immune system |
| ERP123257 | Delayed Establishment of Gut Microbiota in Infants Delivered by Cesarean Section |
| ERP123262 | Complete genome sequence of Microbacterium sp. strain Nx66, isolated from petrochemical contaminated waters of El Saf-Saf valley in Algeria |
| ERP123263 | Miseq Whole Genome Sequencing of Micobacterium Avium Paratuberculosis clone isolated in Emilia Romagna (Italy) within a single herd |
| ERP123264 | RNA samples in Ovary of Pigs |
| ERP123265 | Mycobacterium tuberculosis IHU, France |
| ERP123267 | RNA samples in Hypothalamus of Pigs |
| ERP123268 | No tangible effects of field-grown cisgenic potatoes on soil microbial communities |
| ERP123269 | Integrative computational analysis of the substantia nigra pars compacta and the locus coeruleus |
| ERP123273 | Effect of functional food ingredients on gut microbiota in a rodent diabetes model |
| ERP123275 | Quantitative trait locus analysis of parasitoid counteradaptation to symbiont-conferred resistance |
| ERP123277 | Heterogeneity of a dwarf phenotype in Dutch traditional chicken breeds revealed by genomic analyses |
| ERP123279 | Transcriptome Profiling of Human Monocyte-Derived Macrophages Upon CCL2 Neutralization Reveals an Association Between Activation of Innate Immune Pathways and Restriction of HIV-1 |
| ERP123281 | RNA samples in Hypothalamus of Pigs |
| ERP123282 | RNA samples in Ovary of Pigs |
| ERP123283 | Core and accessory genome comparison of Australian and International Strains of O157 Shiga Toxin-Producing Escherichia coli. |
| ERP123287 | Impact of early empiric antibiotic use on the gut microbiota in very low birth weight preterm infants |
| ERP123288 | Food resource sharing of alder leaf beetle specialists as potential insect-plant interface for horizontal transmission of endosymbionts |
| ERP123293 | In situ structural analysis of SARS-CoV-2 spike reveals flexibility mediated by three hinges |
| ERP123294 | Metagenomic analysis of wastewater |
| ERP123295 | Proxy upload by EnteroBase (from database Escherichia/Shigella) |
| ERP123296 | Proxy upload by EnteroBase (from database Vibrio) |
| ERP123297 | Proxy upload by EnteroBase (from database Clostridioides) |
| ERP123298 | Proxy upload by EnteroBase (from database Moraxella) |
| ERP123299 | Proxy upload by EnteroBase (from database Yersinia) |
| ERP123300 | Proxy upload by EnteroBase (from database Helicobacter) |
| ERP123301 | 1265_PK_MY_GRIGG |
| ERP123302 | RNA sequencing analysis showing the genes that are differentially regulated by ZNF528-WT or ZNF528-c.1282C>T |
| ERP123304 | ATR restrains DNA synthesis and mitotic catastrophe in response to CDC7 inhibition |
| ERP123305 | Aim of the study was the genetic characterization of the whole genome of twoLA-MRSA strains isolated in Greece |
| ERP123307 | Strand-seq data of HGSVC2 samples |
| ERP123311 | Alternative splicing analysis of HPO tissues during pubertal transition in gilts |
| ERP123315 | Whole-genome, sex-specific pooled sequencing of two Formica aquilonia x Formica polyctena hybrid lineages |
| ERP123320 | Sequencing of SARS-CoV-2 genomes from coronavirus infected patients from Poland |
| ERP123321 | Surfactin stimulated by root molecular patterns acts as a key driver of Bacillus-plant mutualistic interaction |
| ERP123322 | Microbial EPS production from various substrates |
| ERP123323 | Whole genome sequencing and assembly of Moricandia species |
| ERP123327 | Acomys russatus (golden spiny mouse) |
| ERP123328 | Onychomys torridus (southern grasshopper mouse) |
| ERP123329 | Genome-wide chromatin binding of ZNF528-WT and ZNF528-c.1282C>T in Saos-2 cells. |
| ERP123330 | Klebsiella phage vB_KaS-Benoit, whole genome |
| ERP123331 | chip seq |
| ERP123333 | Distinct lung microbiota associate with HIV-associated chronic lung disease in children |
| ERP123334 | Microbial Diversity in Environment of Aseptic Ward |
| ERP123335 | Microbial communities in maize rhizosphere |
| ERP123336 | chipseq data |
| ERP123338 | Characterization of the bacterial communities of triatomine genera, the insect vectors of Trypanosoma cruzi, the causative agent of Chagas disease. |
| ERP123339 | Molecular systematics of Crassiphycus and Hydropuntia (Gracilariales, Rhodophyta) with the description of poorly known taxa in the Western Atlantic Ocean |
| ERP123340 | Rhizosphere soil metagenome |
| ERP123342 | We PacBio sequenced eight serially-isolated pairs of Shigella flexneri isolates from an epidemic sub-lineage of MSM-associated S. flexneri 3a. |
| ERP123343 | Sequence-Function mapping of MKK1-ERK2 interactions reveals positive epistasis in the MKK1 D-domain |
| ERP123344 | Sequencing of ITS2 from American Anopheles punctipennis mosquitoes. |
| ERP123346 | Australian marsupial phylogeny with denovo assembly of target exons captured sequences. |
| ERP123347 | Effects of arbuscular mycorrhiza on transcriptome of fruits from a commercially used tomato cultivar grown in hydroponics |
| ERP123348 | Transcriptome and DNA (hydro)methylation in mouse hypothalamic arcuate nucleus in puberty onset. |
| ERP123351 | Sequencing of small RNAs from C. elegans MA lines to study Transposable Element Expression |
| ERP123355 | ChRO-seq on TeloHAEC cells before and after TNFa stimulation |
| ERP123356 | RNA-seq of the developing human eye (Day 41-44 of embryonic development) comparing gene expression in ventral optic fissure margins with dorsal optic cup |
| ERP123357 | RNA-Seq of developing mouse eye (E11.5 and E12.5) comparing optic fissure margins with dorsal optic cup |
| ERP123358 | RNA-seq of mouse alveolar macrophages from control and Influenza A virus infected animals |
| ERP123359 | High accuracy gene expression profiling of sorted cell subpopulations from breast cancer PDX model tissue |
| ERP123362 | RNA-seq of Streptococcus thermophilus N4L grown in two different yeast extracts |
| ERP123366 | Age patterning in the wild chimpanzee gut microbiota |
| ERP123367 | increasing pH to shape the chain elongation reactor microbiota |
| ERP123368 | The intestinal microbiome, weight and metabolic changes in women treated by adjuvant chemotherapy for breast and gynecological malignancies. |
| ERP123369 | Breast-milk derived potential probiotics as strategy for the management of childhood obesity |
| ERP123370 | virulence factors in Aeromonas veronii |
| ERP123371 | Study A small protein regulates cell division |
| ERP123375 | The IgA-Seq method is used to identify which commensal bacteria are bound by host IgA. This study provides a comprehensive investigation of the IgA-Seq method, describing a highly optimised protocol for IgA-Seq from gastrointestinal samples and new analytical techniques that improve the accuracy of quantification of taxon-level IgA binding estimates. |
| ERP123376 | Transcriptome and DNA (hydro)methylation in mouse hypothalamic arcuate nucleus in puberty onset |
| ERP123377 | Universal antimicrobial resistance detection from clinical bacterial isolates using proteomics |
| ERP123379 | De-novo assembly and SV analysis of a 115-year-old Dutch cognitively healthy woman |
| ERP123380 | High throughput sequencing provides exact genomic locations of inducible prophages and accurate phage-to-host ratios in gut microbial strains |
| ERP123382 | NGS data of Listeria monocytogenes surveillance in Belgium |
| ERP123383 | Taxonomic, functional and ecological inventory of 67 full-scale biogas digesters |
| ERP123385 | Motilimonas eburnea |
| ERP123386 | Swine leukocyte antigen diversity of Kenyan domestic pigs and warthogs |
| ERP123388 | Microbial communities in urban recreational surface waters in Bogotá, Colombia using Next Generation Sequencing |
| ERP123390 | Targeting EHMT1/2 sensitizes colorectal cancer to pan-HDAC inhibitors |
| ERP123397 | Bacterial communities of arthroplasty patients before and after decolonisation treatments: Analysis by targeted 16S rRNA and staphylococcal-specific gene sequencing |
| ERP123399 | Reference-free reconstruction and quantification of transcriptomes from Nanopore long-read sequencing |
| ERP123400 | The application of Gramine shapes the bacterial communities thriving at the barley root-soil interface |
| ERP123401 | Mycobacterium tuberculosis Genetic Network in Lima |
| ERP123403 | Xylophagaidae marker genes |
| ERP123405 | RNA-seq analysis of a mutualistic association between perennial ryegrass (Lolium perenne) and its fungal endophyte Epichloë festucae var. lolii. |
| ERP123408 | Genome-wide association study reveals genes associated with the absence of intermuscular bones in tambaqui (Colossoma macropomum)" |
| ERP123409 | Unprocessed Illumina MiSeq 2x250 sequence from viral-like particle preparations from children enrolled in an oral Rotarix study. |
| ERP123410 | novel in-situ microbial enrichment |
| ERP123413 | Bluetongue Virus MNG1/2018 segment 1-10 complete genome |
| ERP123414 | Deep whole-genome sequencing of SARS-CoV-2 patient samples from Austria. |
| ERP123415 | Bluetongue Virus MNG2/2016 segment 1-10 complete genome |
| ERP123416 | Bluetongue Virus MNG3/2016 segment 1-10 complete genome |
| ERP123418 | New ITS2 amplicons of soil fungi |
| ERP123419 | Parallel gene expression evolution in natural and laboratory evolved populations |
| ERP123420 | Collection of reference strains for sero- and virulence typing of E. coli |
| ERP123422 | Analysis of genetic diversity in cetacean morbilliviruses |
| ERP123423 | Campylobacter jejuni from canine and bovine cases of campylobacteriosis express high antimicrobial resistance rates against (fluoro)quinolones and tetracyclines |
| ERP123424 | PfCSP in Senegal |
| ERP123425 | Gene expression changes in mouse dendritic cell line DC2.4 infected with mouse cytomegalovirus (MCMV) at 3 and 18 hours post-infection |
| ERP123426 | UK Industrial Anaerobic Digestors |
| ERP123432 | Landoltia punctata shotgun WGS sequencing, clone 7260 |
| ERP123433 | DZIF study R-Net Klebsiella pneumoniae |
| ERP123434 | Hereditary sensory and autonomic neuropathy in a family of mixed breed dogs is associated with a novel FAM134B (RETREG1) mutation |
| ERP123435 | Identification of a Mutation in NDP Associated With X-Linked Retinal Dysplasia in the English Cocker Spaniel |
| ERP123437 | A new Pseudomonas species, isolated from charcoal |
| ERP123438 | Genomic novelty and process-level convergence in adaptation to whole genome duplication |
| ERP123440 | E. faecium bacteriophages and bacteriophage resistant E. faecium strains |
| ERP123442 | We analyze the genetic composition,demographic history and natural selection in Peruvian Natives from Andes and Amazon |
| ERP123443 | De novo assembly of Tibetan semi-wild wheat Zang1817 genome |
| ERP123444 | Dissecting the role of the Tumor Suppressor UTX in cancer development |
| ERP123445 | Complex Internal Microstructure of Feather Follicles on Chicken Skin Promoted the Bacterial Cross-contamination of Carcass during the Slaughtering Process |
| ERP123447 | Crocidura russula in Italy |
| ERP123448 | ESOPHAGEAL MICROBIOME IN ACTIVE EOSINOPHILIC ESOPHAGITIS AND CHANGES INDUCED BY DIFFERENT THERAPIES |
| ERP123449 | The pangenome analysis of the soil-borne fungal phytopathogen Rhizoctonia solani and development of a comprehensive web resource |
| ERP123451 | RAD-seq of AMPRIL (Arabidopsis multiparent RIL population) |
| ERP123455 | Morphogenesis of phototrophic biofilms is controlled by hydraulic constraints and enabled by architectural plasticity |
| ERP123456 | SARS-CoV-2 phylogeny during the early outbreak in the Basel area, Switzerland: import and spread dominated by a single B.1 lineage variant (C15324T) |
| ERP123462 | Effects of 16O Charged-Particle Irradiation on Cognition, Hippocampal Morphology and Mutagenesis in Female Mice |
| ERP123463 | The effect of probiotics supplementation on gut microbiota after Helicobacter pylori eradication: a multicenter, randomised controlled trial |
| ERP123464 | Fitness effects for Ace insecticide resistance mutations are determined by ambient temperature |
| ERP123465 | The Epidome - A species-specific approach to assess the population structure and heterogeneity of Staphylococcus epidermidis colonization and infection |
| ERP123467 | This is a metagenetic study on Nyons table olives bacterial communities |
| ERP123468 | This is a metagenomic study on Nyons table olive fungal communities |
| ERP123469 | Quantifying sequencing error and effective sequencing depth of liquid biopsy NGS with unique molecular identifier error correction |
| ERP123470 | DELETE THIS |
| ERP123471 | mRNA sequencing of Coffea leaves exposed and not exposed to hexanoic acid |
| ERP123472 | RNAseq of A/J mice spiral ganglion derived neurospheres vs differentiated auditory neurons |
| ERP123477 | EMG produced TPA metagenomics assembly of PRJEB8094 data set (The initial state of the human gut microbiome determines its reshaping by antibiotics). |
| ERP123480 | WGS of quinoa genotypes |
| ERP123482 | Assessing the Phylogeographic Distribution of Candidatus Cardinium hertigii in Culicoides |
| ERP123484 | Isolation and characterization of nitrate-reducing bacteria as potential probiotics for oral and systemic health |
| ERP123485 | The impact of helminth infection on the mucosal and luminal GI microbiota of the horse |
| ERP123487 | RNA sequencing from mouse, pig and human precision cut lung slices (PCLS) |
| ERP123488 | A 16S amplicon survey of activated sludge plants in the English Midlands. |
| ERP123489 | A survey of anaerobic digesters treating sludge from wastewater treatment plants in on in Northwest England. |
| ERP123490 | A selection of Norwegian soil samples sequenced to obtain data to fit a diversity model |
| ERP123497 | Metalimnetic chlorophyll maxima in Lake Kinneret - Chlorobium revisited |
| ERP123498 | Sequencing data for 29 African cattle from Senegal and Burkina Faso generated with Illumina HiSeq X Ten |
| ERP123500 | Microbial community composition of intertidal sediments within the discharge area of a shallow subterranen estuary |
| ERP123506 | Pristionchus pacificus transcriptome |
| ERP123507 | The potency of gepotidacin and zoliflodacin in fluoroquinolone-resistant Escherichia coli upon tolC inactivation. |
| ERP123508 | Favipiravir-resistant influenza A virus shows potential for transmission |
| ERP123509 | Visual mate preference evolution during butterfly speciation is linked to neural processing genes |
| ERP123511 | Single cell RNA sequencing of paired non small cell lung carcinoma tissue and peripheral blood from 5 donors |
| ERP123513 | Extreme enrichment of VNTR-associated polymorphicity in human subtelomeres: genes with most VNTRs are predominantly expressed in the brain |
| ERP123515 | Re-assembly of 19th-century smallpox vaccine genomes reveals the contemporaneous use of horsepox and horsepox-related viruses in the United States |
| ERP123516 | Analysis of Klebsiella spp in wastewater from a hospital drain and WWTP influent in South West England. |
| ERP123518 | Potato virus X |
| ERP123520 | RNA-Seq of mouse lung vaccinated with subcutaneous BCG and two novel tuberculosis mucosal boosting nanovaccines |
| ERP123521 | Single cell transcriptional profile of third instar larval wing discs in Drosophila |
| ERP123526 | RNA-seq of Drosophila simulans and Drosophila mauritiana developing male genitalia |
| ERP123531 | The dynamic changes of gut microbiota during the perinatal period in sows |
| ERP123536 | RNA-seq of human hypertrophic scar fibroblast cell treated with pcolce siRNA against untreated controls |
| ERP123537 | RNA-seq of human hypertrophic scar fibroblast cell treated with fkbp10 siRNA against untreated controls |
| ERP123542 | An integrated multi-omics protocol for swine feces reveals congruent longitudinal dynamics in microbiome structure and function |
| ERP123545 | Characterization of the fecal microbiota of healthy horses |
| ERP123546 | Epidemiology of chikungunya virus across neglected regions of Indonesia |
| ERP123548 | Genome evolution under sexual and asexual reproduction (Mite genomes) |
| ERP123550 | Deletion of miRNA-22 induces cardiac hypertrophy in females but attenuates obesogenic diet-mediated metabolic disorders |
| ERP123553 | Sequencing of two Syndiniales dinoflagellate species, Amoebophrya spp. A25 and A120 |
| ERP123555 | Synthesis and characterization of peptides derived from spider venom: towards the development of new antimicrobials. |
| ERP123558 | Targeted sequence capture of Orientia tsutsugamushi DNA from chiggers and humans |
| ERP123560 | Urinary microbiota and bladder cancer |
| ERP123561 | EMG produced TPA metagenomics assembly of PRJEB34410 data set (Secrets of the hospital underbelly: abundance of antimicrobial resistance genes in hospital wastewater reflects hospital antimicrobial use and inpatient length of stay). |
| ERP123562 | scATAC-seq of mouse Plasmodium-specific CD4+ T cells |
| ERP123564 | EMG produced TPA metagenomics assembly of PRJEB15448 data set (The influence of chitin addition on the lettuce rhizosphere microbiome). |
| ERP123565 | Brucella suis biovar 2 isolates from free-ranging wild boars in canton Bern |
| ERP123566 | Assembly of Triticum aestivum cv. 'Norin61' as part of the 10+ Wheat Genomes Project. |
| ERP123567 | RNA-seq analysis of substates of human pluripotent stem cells with mesoderm bias and early differentiating cells towards the mesoderm lineage |
| ERP123569 | Single-cell transcriptome of cerebral organoids with and without methanol fixation |
| ERP123571 | We used bioinformatics tools to mine the T. harzianum genome for potential genomics, transcriptomics, and exoproteomics data and coexpression networks. |
| ERP123572 | Proxy upload by EnteroBase (from database Salmonella) |
| ERP123573 | Tomato spotted wilt virus |
| ERP123575 | Bovine IAARD |
| ERP123580 | Whole genome sequencing of samples suspected to be Mycobacterium chimaera from clinical samples and from water samples originating from Heating-Cooling Units in medical centers in Israel. |
| ERP123581 | In this study, we performed infection studies of murine precision cut lung slices (PCLS) with live or heat-killed P. aeruginosa, in order to investigate the role of viability for induction of an innate immune response. |
| ERP123587 | Divergence and Remarkable Diversity of the Y Chromosome in Guppies |
| ERP123588 | Reduced Representation Bisulfite Sequencing of hearts of Cobb Broiler chicks collected at 6hr post-hatch and incubated at different egg shell temperatures and CO2 concentrations. |
| ERP123589 | [Smart-seq2] scRNA-seq of mouse Plasmodium-specific CD4+ T cells |
| ERP123590 | Adaptation of Acidithiobacillus spp. co-culture to arsenopyrite |
| ERP123592 | Englacial water can slowly freeze in the englacial channels where the slow freezing excludes air bubbles giving the ice a clear aspect. This ice is then uplifted to the surface ablation zone of the glacier by glacial ice movements and can therefore be seen on the glacier surface in the form of clear ice bands. We employed an indirect method to sample englacial water by coring these ice bands. We studied 62 ice samples collected from clear-ice bands (i.e. frozen englacial water) and cloudy ice (i.e. meteoric deposition) in the Storglaciären (Sweden). We characterized microbial communities found inside the different ice types through the sequencing of the 16S rRNA hypervariable V3-V4 region of Bacteria and Archaea, sequenced using Illumina MiSeq platform (2x300 bp) with Pro341F and Pro805R primers. |
| ERP123597 | Later Stone Age human hair from Vaalkrans Shelter, Cape Floristic Region of South Africa, reveals genetic affinity to Khoe groups |
| ERP123599 | Extended-spectrum beta-lactamase Enterobacteriaceae (ESBL-E): a community-based cross-sectional study, the Netherlands, 2014 to 2016 |
| ERP123600 | Transient in vivo base editing with no detectable DNA off-target mutations |
| ERP123601 | Draft genome sequences of manganese-oxidizing bacteria |
| ERP123602 | Comparative analysis of clonal evolution among patients with right-sided colon cancer, left-sided colon cancer and rectal cancer |
| ERP123604 | African swine fever virus (ASFV) strain Arm/07/CBM clones 1 and 3 |
| ERP123605 | Assembly of an African swine fever virus (ASFV) strain Arm/07/CBM/c4 |
| ERP123606 | Diversification and selection pattern of CYP6B genes in Japanese Papilio butterflies and their association with host plant spectra |
| ERP123608 | Study of Anaerobic Digester granules communities. |
| ERP123611 | Genome wide association studies in multiple spinach breeding populations refine downy mildew race 13 resistance genes |
| ERP123615 | Sequence, assembly and annotation of Bayer Crop Science’s maize inbred line LH244 |
| ERP123616 | We employed a deep 16S amplicon sequencing approach to evaluate the diversity of six sediments deep-sea in the Colombian Southern Caribbean |
| ERP123617 | AOA in low pH soils |
| ERP123618 | Bursaphelenchus xylophilus complete genome |
| ERP123619 | Bursaphelenchus okinawaensis genome sequencing |
| ERP123620 | x |
| ERP123621 | Here, we seek to address if an asthmatic host environment is associated with an increased emergence of influenza virus variants. |
| ERP123622 | vibrio parahaemolyticus RNA-seq |
| ERP123623 | Here, we seek to address if an asthmatic host environment is associated with an increased emergence of influenza virus variants. |
| ERP123627 | Transcriptome analysis of Beijerinckiaceae bacterium RH AL1 grown with pyruvate as the carbon source in response to lanthanum supplementation |
| ERP123628 | Identification of Disease- and Headache-Specific Mediators and Pathways in Migraine Using Blood Transcriptomics |
| ERP123630 | Carbapenemase IncF-borne blaNDM-5 gene in the E. coli ST167 high-risk clone from canine clinical infection, Italy |
| ERP123631 | In vivo CRISPR/Cas9 screen to identify candidate therapeutic gene targets to enhance docetaxel efficacy in prostate cancer |
| ERP123632 | RNA-seq analysis of TCEAL1 knock down with/without docetaxel treatment to enhance docetaxel efficacy in prostate cancer |
| ERP123633 | RNA-seq of human patient-derived xenograft pancreatic cancer PancA6L cells cultured for 14 days with Galactose versus PancA6L cells cultured for 14 days with Glucose |
| ERP123634 | Snake Species Identification by PCR Amplification and Sequence Analysis of Mitochondrial DNA from Bite-Site Swabs |
| ERP123635 | Whole-genome sequencing of Pseudomonas sp. FEN, a siderophore-producing pseudomonad |
| ERP123636 | Mutation mapping and identification for NMD mutants from EMS screen by whole genomic DNA sequencing |
| ERP123638 | HSV-2 strain MS genome sequencing using both Illumina and PacBio technologies |
| ERP123639 | Inherited diseases in cattle |
| ERP123649 | Baterial motility |
| ERP123650 | Salmonella Newport outbreak in France August 2020 |
| ERP123651 | Salmonella 1,4,[5],12:i:- (monophasic) outbreak in France August 2020 |
| ERP123652 | Diet composition of krill and salps in the Southern Ocean |
| ERP123654 | miRNA synergism, combination of pro-neurogenic miRNAs as a more effective strategy to target neural derived tumors |
| ERP123655 | GENOMIC STEPPE ANCESTRY IN SKELETONS FROM THE NEOLITHIC SINGLE GRAVE CULTURE IN DENMARK |
| ERP123658 | The uropygial gland microbiome of house sparrows with malaria infection |
| ERP123659 | Discovering inhibitor tolerant cellobiohydrolases and lytic polysaccharide mono-oxidases from endophytic fungi |
| ERP123660 | Microbiomes of a specialist caterpillar are consistent across different habitats but also resemble the local soil microbial communities |
| ERP123661 | Comparative analysis of genetic determinants encoding cadmium, arsenic and benzalkonium chloride resistance in Listeria monocytogenes of human, food and environmental origin |
| ERP123675 | Complete genome sequences of 12 quinolone-resistant Escherichia coli containing qnrS1 based on hybrid assemblies |
| ERP123677 | Mutation rates in C. riparius after exposure to cadmium |
| ERP123686 | scRNA-seq of human fetal lung and intestine tissue |
| ERP123687 | RNA-seq reads from developing wings of the field cricket Teleogryllus oceanicus |
| ERP123688 | 10x single cell gene expression and V(D)J immune profiling of T cells from the blood, synovial fluid and synovial tissue in psoriatic arthritis patients |
| ERP123691 | Broiler Marker Assisted Selection project |
| ERP123692 | 16S amplicon sequencing of microbiome samples from Nile tilapia. |
| ERP123696 | NGS data of Shigella surveillance in Belgium |
| ERP123700 | Development of a phenotyping platform for the characterization of zebrafish autism models. |
| ERP123701 | Molecular characterization on Ongole Crossbreeds of Cattle in Indonesia |
| ERP123702 | Illumina and Nanopore whole-genome sequencing data from ESBL-positive Escherichia coli collected in the COMBAT study |
| ERP123703 | intestinal microbiota |
| ERP123705 | Case report of a human pneumonia due to Legionella sainthelensi |
| ERP123709 | Three phases of ancient migration shaped the ancestry of human populations in Vanuatu |
| ERP123714 | Risk Factors for Gut Microbial Dysbiosis in Hospitalized Children |
| ERP123717 | Physical activity shapes the intestinal microbiome and immunity of healthy mice but has no protective effects against colitis in Muc2-/- mice |
| ERP123720 | Habitat conditions reflect compositional differences in microbiome among Caribbean sea urchins |
| ERP123722 | 16S rRNA gene sequence of Starkeya veronica |
| ERP123723 | Escherichia coli causing recurrent urinary tract infections: Comparison to non-recurrent isolates and genomic adaptation in recurrent infections |
| ERP123724 | Resource diversity and nutritional quality in solitary bees |
| ERP123725 | Use of (e)DNA and barcoding techniques for screening of (potentially) invasive alien species. |
| ERP123726 | Genomes of Listeria monocytogenes eslB deletion and complementation strains were sequenced to identify potential alterations as compared to the L. monocytogenes wildtype strain 10403S. |
| ERP123727 | Amaizing Dent Genotyping |
| ERP123728 | Chromosome-level assembly of A. thaliana accession Cdm-0 (AT9943) using PacBio sequencing |
| ERP123730 | Glycans as immune-checkpoints in cancer: removal of branched N-glycans prevents colorectal cancer progression through increasing immune recognition and anti-tumor immune response |
| ERP123731 | Chicken splenic conventional dendritic cell and macrophage subsets can be identified by differential expression of CSF1R and CD11d using the CSF1R-reporter transgenic chickens |
| ERP123733 | E.coli |
| ERP123734 | A potential role for stress-induced microbial alterations in IgA-associated irritable bowel syndrome with diarrhea |
| ERP123735 | Klebsiella phage vB_KvM-Eowyn |
| ERP123736 | Klebsiella phage vB_KppS-Raw |
| ERP123739 | Ultra-deep search for novel viruses |
| ERP123740 | Telomere-to-telomere assembly of the genome of an individual Oikopleura dioica from Okinawa using Nanopore-based sequencing |
| ERP123741 | Heliconius numata individual whole genome shotgun sequencing dataset |
| ERP123742 | Molecular epidemiology of SARS-CoV-2 in Hungary |
| ERP123743 | Early diagnosis of brain abscess using real-time electron microscopy and metagenomics. |
| ERP123747 | RNA seq in U-937 cells wildtype clones and rs2431697 region deletion clones |
| ERP123749 | RNA-seq of small intestinal macrophages, neutrophils, CD103-CD11b+cDC and cryptopatch and ILF associated mononuclear phagocytes (CIA-MPh) |
| ERP123750 | Vancomycin resistant Enterococci among COVID-19 patients |
| ERP123751 | MinION long read sequencing of selected clones from the bMQ BAC library |
| ERP123752 | Klebsiella phage vB_KppS-Eggy |
| ERP123753 | Klebsiella phage vB_KppS-Pokey, whole genome |
| ERP123754 | Klebsiella phage vB_KppS-Ant, whole genome |
| ERP123755 | Whole genome sequencing of K. pneumoniae isolated from the marine environment |
| ERP123756 | ChIP-seq to investigate the role of FliA-transcribed protein coding genes in Salmonella Typhimurium |
| ERP123758 | RNA-seq to investigate the role of FliA-transcribed protein coding genes in Salmonella Typhimurium |
| ERP123761 | RNA-seq in MCF-7 cells which had been exposed to arsenic |
| ERP123762 | The complete genome sequence of the hyperthermophillic archaeon Thermococcus sp. IRI35c. |
| ERP123771 | Klebsiella phage vB_KaS-Gatomon, whole genome |
| ERP123772 | Klebsiella phage vB_KaS-Ahsoka, whole genome |
| ERP123773 | Klebsiella phage vB_KppS-Samwise, whole genome |
| ERP123774 | Klebsiella phage vB_KpP-Yoda, whole genome |
| ERP123775 | Klebsiella phage vB_KpP-Goliath, whole genome |
| ERP123776 | Klebsiella phage vB_KpP-Screen, whole genome |
| ERP123777 | Klebsiella phage vB_KaS-Veronica, whole genome |
| ERP123778 | Klebsiella phage vB_KppS-Totoro, whole genome |
| ERP123779 | Klebsiella phage vB_KppS-Ponyo, whole genome |
| ERP123780 | Klebsiella phage vB_KppS-Jiji, whole genome |
| ERP123781 | Klebsiella phage vB_KppS-Storm, whole genome |
| ERP123782 | Klebsiella phage vB_KppS-Anoxic, whole genome |
| ERP123783 | Klebsiella phage vB_KqM-LilBean, whole genome |
| ERP123784 | Klebsiella phage vB_KqM-Bilbo, whole genome |
| ERP123785 | Klebsiella phage vB_KqM-Westerburg, whole genome |
| ERP123786 | Klebsiella phage vB_KoM-Liquor, whole genome |
| ERP123787 | Klebsiella phage vB_KpM-Milk, whole genome |
| ERP123788 | Klebsiella phage vB_KoM-Pickle, whole genome |
| ERP123789 | Klebsiella phage vB_KpM-Mild, whole genome |
| ERP123790 | Klebsiella phage vB_KpM-KalD, whole genome |
| ERP123791 | Klebsiella phage vB_KoM-MeTiny, whole genome |
| ERP123792 | Klebsiella phage vB_KpM-SoFaint, whole genome |
| ERP123793 | Klebsiella phage vB_KoM-Flushed, whole genome |
| ERP123794 | Klebsiella phage vB_KpM-Wobble, whole genome |
| ERP123797 | ATAC-seq in human CD4+T cells, CD8+T cells, CD19+B cells and CD14+ monocytes |
| ERP123798 | Whole genome sequencing of teak (Tectona grandis L. f.) in Thailand |
| ERP123799 | This study presents, for the first time, the impact of acrolein, a highly reactive and toxic compound, whose formation is likely a common feature of human gut microbiota, on model intestinal microbial communities. |
| ERP123800 | Latvian SARS-CoV-2 isolate genetic diveristy |
| ERP123801 | IN VITRO EVOLUTION OF BACTERIAL POPULATIONS WITH SINGLE CELL SEQUENCING |
| ERP123802 | Leaf microbiota and drought stress in forest trees |
| ERP123803 | Whole genome sequencing of Bacillus sp. EAR8 |
| ERP123805 | Trajectory_and_Uniqueness_of_Mutational_Signatures_in_Yeast_Mutators |
| ERP123807 | Enterobacter colonization and infection in a single NICU center: retrospective investigation of implemented preventive measures after an outbreak |
| ERP123810 | Replication of plasmids without Ori into Thermococcus barophilus suggest utilization of recombination-dependent replication |
| ERP123812 | RNA-seq analysis of primary, processed and total RNAs of an E. coli wt and a mutant inactivated for RNase III |
| ERP123813 | Alterations in gut microbiome in cirrhosis as assessed by quantitative metagenomics. Relationship with acute-on-chronic liver failure and mortality and prognosis. |
| ERP123814 | farakka1 |
| ERP123815 | RNA-Seq of influenza A/Puerto Rico/8/1934 (H1N1) virus infected MRC5, WI-38 VA-13, A549 and HEK293FT human cells |
| ERP123816 | The effect of an early-life probiotic supply on piglets fecal microbiota and growth performance until weaning |
| ERP123822 | Host range of SXT/R391 elements determined by EpicPCR in Meurthe River water sampled in Malzeville City (FRANCE). |
| ERP123823 | Investigation of the diversity of Listeria monocytogeneses CC121 related to the finding of a ST strain in a dolphin brain |
| ERP123826 | A modular system regulates specialized metabolite pathway branch choice in the medicinal plant Catharanthus roseus. |
| ERP123827 | A modular system regulates specialized metabolite pathway branch choice in the medicinal plant Catharanthus roseus |
| ERP123828 | Temporal response of soil bacterial communities to application of organic and inorganic phosphate based fertilisers under of Vicia faba L cultivation |
| ERP123829 | A modular system regulates specialized metabolite pathway branch choice in the medicinal plant Catharanthus roseus |
| ERP123830 | Single-cell mRNA-seq from a healthy skeletal muscle cell derived from human induced pluripotent stem cell |
| ERP123831 | Genomic characterisation of Escherichia coli isolates from drinking water systems in rural Kenya |
| ERP123832 | QUANTSEQ 3' sequencing of protrusions and cell bodies of control (NT) or LARP6 siRNA (LARP6 KD) transfected MDA-MB231 breast cancer cells |
| ERP123833 | RNA-seq of murine Th1 and Th2 cells differentiated for 24hr with or without the presence of actin and EZH2 inhibitors |
| ERP123834 | Chip-seq of EZH2 and VAV1 in 24hr differentiated Th1 and Th2 cells with or without EZH2 or Actin polymerization inhibitors |
| ERP123836 | Data from Jose Cerca's PhD at the University of Oslo |
| ERP123837 | Using_scRNA_seq_to_examine_transcriptional_variation_in_the_malaria_parasite_ookinete_stage |
| ERP123838 | The Vaginal Microbiota and Innate Immunity After Local Excisional Treatment for Cervical Intraepithelial Neoplasia |
| ERP123839 | Whole genome sequencing from Ovarian Cancer Cell lines |
| ERP123842 | Single cell RNA sequencing of small intestinal dendritic cells from C57BL/6, RORgt-/- and RORgt-Cre x Ltb-flox mice |
| ERP123846 | Variation of temperature and carbon sources to isolate thermophilic, thermotolerant and heat-resistant fungi from compost and soil |
| ERP123855 | Prediction of Antimicrobial Resistance in clinical Campylobacter jejuni Isolates from Whole-Genome Sequencing Data |
| ERP123856 | Metagenomic analysis of respiratory samples from a COVID-19 ICU patient |
| ERP123858 | Gut microbiome variation modulates the effects of dietary fiber on host metabolism |
| ERP123859 | STOTEN 2 |
| ERP123860 | Transposon-insertion sequencing in a clinical isolate of Legionella pneumophila to identify essential genes and determinants of natural transformation |
| ERP123862 | serial dilutions of mock community to assess contaminant and spurious assignment of taxa |
| ERP123863 | Adaptive mutations associated with oxacillin treatment failure in Staphylococcus aureus infections |
| ERP123864 | evolution of key genes related to flavonoids in Apiaceae |
| ERP123866 | Taxonomic study of Gulosibacter sp. 401352-2018 |
| ERP123867 | SNPs of Bone morphogenetic protein 2 (BMP2) in the razor clam Sinonovacula constricta |
| ERP123869 | Describing variability in the tyrosinase (TYR) gene, the albino coat colour locus, in domestic and wild European rabbits |
| ERP123873 | Prova_fasta |
| ERP123874 | Genomic insights into adaptations of TMA-utilizing methanogens to diverse habitats including the human gut |
| ERP123875 | CRISPR-Cas9 mediated editing of the CD46 gene in primary human B cells prior to their infection with Epstein-Barr virus (EBV) – analysis of CD46 transcripts after 24 hours |
| ERP123877 | HYDROGEN AS A CO-ELECTRON DONOR FOR CHAIN ELONGATION WITH COMPLEX COMMUNITIES |
| ERP123878 | The human gastrointestinal tract through space and time- Fetal VDJ |
| ERP123879 | Exome sequencing of lymphoma tumors developed in PPM1D transgenic mouse model after irradiation |
| ERP123881 | Microbial community traits of the amphibian skin microbiota as predictors of fungal disease risk |
| ERP123882 | Paramecium tetraurelia PacBio RSII sequencing T50 stage |
| ERP123883 | The human gastrointestinal tract through space and time- Fetal GEX |
| ERP123884 | Metagenome-assembled genomes (MAGs) from the yak faecal microbiota |
| ERP123886 | Nanopore sequence data for 12 quinolone-resistant Escherichia coli containing qnrS1 |
| ERP123891 | The human gastrointestinal tract through space and time- Adult GEX |
| ERP123894 | RNAseq comparison of the J and N (Taconic) substrains of C57BL/6 reveals substantial differences in endogenous Murine Leukemia Virus expression |
| ERP123896 | Interinstitutional effort to sequence SARS-CoV-2 circulating genomes in Ireland during the Covid-19 global pandemic. |
| ERP123897 | Carnobacterium maltaromaticum assembles |
| ERP123898 | The human gastrointestinal tract through space and time- Adult VDJ |
| ERP123904 | RNA-seq of U937 cells treated with AICAr |
| ERP123906 | Methylation profiling of C.elegans to identify CEH-60/PBX binding sites |
| ERP123908 | Transcriptome and translatome of cardiomyocytes exposed to hypoxia in vivo and in vitro |
| ERP123910 | Bacterial communities associated with three terrestrial orchid species as revealed by 16S rRNA gene metabarcoding |
| ERP123911 | Molecular identification of Sarcocystis wobeseri in the white-tailed sea eagle (Haliaeetus albicilla) |
| ERP123912 | Expression Analysis of Prrx1-profienct and Prrx1-deficient pancreatic fibroblasts cultured in 2D and 3D |
| ERP123913 | Multidimensional chromatin profiling of zebrafish and human pancreas to uncover and validate disease-related enhancers |
| ERP123914 | Culturing 2.7 million-year-old bacteria carrying resistance genes and comparative genomics with modern isolates. |
| ERP123915 | Arctic seasonal ice zone ecology |
| ERP123918 | Sediment metatranscriptomes |
| ERP123921 | RNAseq-based Transcriptional Profiling of Adult Male Rat Liver and/or Kidney following 90 Day Dietary Exposure to Fenpicoxamid, Pronamide, Sulfoxaflor, or Triclopyr Acid |
| ERP123922 | Quantification of the adaptive power of integron shuffling through experimental evolution in P.aeruginosa PAO1 |
| ERP123923 | Transcriptome Sequencing of H. volcanii with CRISPRi knockout of endA and wt. |
| ERP123924 | Mutational analysis of a myelodysplasia cutis case |
| ERP123927 | Evolution of the bacterium Serratia marcescens under several experimental temperature treatments (fluctuating and constant temperatures) |
| ERP123928 | RNA-Seq of anagen pilosebaceous units (PUs) isolated from occipital and vertex scalp regions of 10 Hamilton grade IV male androgenetic alopecia (AGA) volunteers |
| ERP123929 | RNAseq of murine CT26 cell line -WT and gal-9-KO - in vitro |
| ERP123930 | RNAseq of murine MB49 cell line - WT and gal-9-KO - in vitro |
| ERP123931 | A pilot study to estimate the carrier frequency of common genetic disorders in North India |
| ERP123932 | An irritable bowel syndrome subtype defined by species-specific alterations in faecal microbiota. |
| ERP123934 | Successive plant growth amplifies genotype-specific assembly of the tomato rhizosphere microbiome |
| ERP123935 | Single-cell RNAseq of phenotypically defined human B cell subsets |
| ERP123936 | Mouth and gut microbiome of Nile tilapia |
| ERP123937 | Fractionation of different lignocelullose by Streptomyces coelicolor A3(2) and production of secondary metabolites |
| ERP123939 | Whole genome sequencing of Colossoma macropomum (Characiformes: Characidae): an important Amazon finfish for aquaculture in South America. |
| ERP123941 | Soil microbial community’s diversity rehabilitation in Colombian Coal Mine Spoil Dump: a metagenomic survey unravels its metabolic potential |
| ERP123942 | Evolution of Staphylococcus aureus ST45 |
| ERP123945 | WAS enhance organohalides respiration |
| ERP123947 | Lawsonella clevelandensis Case Report |
| ERP123951 | Impact of yeast-derived ß-glucans on the porcine gut microbiota and immune system in early life |
| ERP123955 | Bioaugmentation of Paenarthrobacter enhanced the degradation efficiency of atrazine residue in soil |
| ERP123956 | turf algal associated bacterial communities |
| ERP123958 | Reference-free reconstruction and quantification of transcriptomes from Nanopore long-read sequencing (signal files) |
| ERP123960 | Ancient DNA reveals monozygotic newborn twins from the Upper Palaeolithic |
| ERP123961 | Gulosibacter hominis sp. nov: a novel species from human clinical samples |
| ERP123962 | Effect of temperature on acetate mineralization kinetics and microbial community composition in a hydrocarbon-affected microbial community during a shift from microoxic to sulfidogenic conditions |
| ERP123963 | RNA sequencing of native and ex vivo cultured murine tail tendon fascicles |
| ERP123964 | Example raw data to cover the strain diversity of M. bovis commonly isolated in the UK |
| ERP123967 | mRNA transcriptional profiles in Streptococcus thermophilus wild-type strain LMD-9 and 3 mutants deleted for the pptAB, eep and amiCDE genes. |
| ERP123970 | Whole genome sequencing of natural populations of the grass Brachypodium distachyon, collected in Italy and France |
| ERP123972 | To delineate mutational landscape of patients with myelofibrosis |
| ERP123974 | RNA-seq of variable heavy and light IgG fragments of CD19(+)CD24(high)CD38(high) subpopulation isolated from peripheral blood of patients with multiple sclerosis and healthy donors. |
| ERP123975 | The specific microbial biodiversity linked to a certain vineyard location has been reported to be a crucial aspect in the concept of wine-terroir together with edaphic, climatic and human factors. These biogeographical patterns referred as the microbial-terroir. In this work, we applied an HTS amplicon library approach to conduct a global survey of the soil microbial communities of vineyards. We analyzed 200 soil vineyards worldwide, in four continents trying to settle the basis for the development of a vineyard-soil-microbiome map to represent the microbial-wine-terroir on a global scale. We highlighted that this link exists at different scales; among continents, states, and between different wine-regions within the same country. Geography has a strong effect on microbial communities composition at a global scale, which is also maintained at a country scale. Also, for the very first time, we describe the microbial community of a new and northern winemaker regions such as Denmark, that can be of great interest for viticulture adaptation in a context of climate change. Finally, we developed a predictive model, based on random forest analyses, to discriminate between microbial patterns to identify the geographical source of the samples with reasonable precision. |
| ERP123976 | Variants of INDEL in gastric cancer |
| ERP123977 | Molecular repertoire of Deinococcus radiodurans after 1 year of exposure outside the International Space Station within the Tanpopo mission |
| ERP123979 | Whole mitochondrial DNA sequencing from 92 matched-paired peripheral blood and breast tumors. |
| ERP123984 | Dysbiotic Lesional Microbiome with Filaggrin Missense Variants Associate with Atopic Dermatitis in India |
| ERP123985 | Complete genome of Enterobacter cancerogenus sp. UPC1, isolated from a crude-oil-degrading consortium |
| ERP123986 | Complete genome of Citrobacter freundii sp. PSV, isolated from a crude-oil-degrading consortium |
| ERP123987 | Complete genome of Serratia sp. Tan611, isolated from a crude-oil-degrading consortium |
| ERP123989 | Complete genome of Agreia sp. COWG isolated from an acid mine drainage |
| ERP123990 | Phylogenetic signatures of ecological divergence and leapfrog adaptive radiation in Espeletia |
| ERP123993 | DISCOVERY OF NOVEL TARGETS IN A CRPS MOUSE MODEL BY TRANSCRIPTOMICS: TNF AND JAK-STAT PATHWAYS |
| ERP123996 | Genetic diversity analysis of lettuce using genotyping-by-sequencing |
| ERP123997 | Molecular Diagnostics of Genetic Myopathy in Indian Subcontinent using Exome sequencing |
| ERP123999 | Rapid identification of Vibrio species belonging to the Harveyi clade by MALDI-TOF MS profiling using main spectral profile database implemented with an in-house database: Luvibase |
| ERP124000 | Phylogenomics and species delimitation for effective conservation of manta and devil rays |
| ERP124001 | Genome-wide sequencing of 20 Leishmania gene mutants as part of a wider study to define protein kinases with life cycle transition roles |
| ERP124003 | Rapid and reproducible Differentiation of hematopoietic and T cell progenitors from pluripotent stem cells |
| ERP124004 | Sequencing of haematopoietic stem and progenitor cell clones from Aldh2-/- Adh5-/- mice |
| ERP124005 | Dissecting the protein and transcriptional responses of human immune cells to T cell and monocyte specific activation |
| ERP124007 | Identification of viruses infecting plants and fungi |
| ERP124009 | Psychrophilic species of the genus Psychrobacter are likely descendants of pathobionts |
| ERP124011 | Post-medieval Latvian oral microbiome in the context of modern dental calculus and modern dental plaque microbial profiles. |
| ERP124014 | Streptomyces sp. KY70 and KY75 strains have been isolated from soil of the Kherzet Youcef Pb/Zn former mine, in Ain Azel (Sétif), Algeria. |
| ERP124016 | Investigation of a superspreading event preceding a large meat processing plant-related SARS-Coronavirus 2 outbreak in Germany |
| ERP124017 | Whole-genome sequencing investigation of a large nosocomial outbreak caused by ST131 H30Rx KPC-producing Escherichia coli in Italy |
| ERP124018 | New species of coelomycetous |
| ERP124019 | The spread of the plasmid RP4 in a microbial community is dependent on the particular donor strain |
| ERP124025 | 4C-Seq identify the interaction between miR-146a promoter and rs2431697-containing region |
| ERP124027 | SARS-CoV-2 spike cleavage and transmission |
| ERP124030 | Single cell sequencing analysis of senescence in Mus musculus prostate cancer models |
| ERP124034 | Test of anti-tumour polymer in mice |
| ERP124037 | Single Molecule Real-Time DNA sequencing of HLA genes |
| ERP124038 | Introgression in the Daphnia longispina species complex |
| ERP124040 | Evolution_and_lineage_dynamics_of_a_transmissible_cancer_in_Tasmanian_devils |
| ERP124042 | TGS full length class II |
| ERP124043 | Long-reads assembly and annotation of the Brassica napus reference genome, Darmor-bzh |
| ERP124044 | Long-read-sequenced reference genomes of the seven major lineages of enterotoxigenic Escherichia coli (ETEC) circulating in modern time |
| ERP124049 | Trypanosoma brucei VSG Switching - CRISPR/Cas9 |
| ERP124060 | A novel KEL*02.03 with c.1414-1G>T SNV found in the Polish family leading to Ko_null phenotype |
| ERP124063 | European seabass and gilthead seabream population pools used for SNP discovery for the development of the 60K combined-species MedFish SNP array |
| ERP124065 | Gestational diabetes influences offspring's gut microbiota |
| ERP124066 | Amsterdam canal sediment, water, and biofilm 16S rRNA gene amplicon sequencing |
| ERP124069 | Staygreen trait mapping |
| ERP124071 | Ecology of Carnobacterium maltaromaticum |
| ERP124073 | Oryza sativa LIGULELESS 2s determine lamina joint positioning and differentiation by inhibiting auxin signaling |
| ERP124074 | Transfer of environmental microbes to the skin and respiratory tract of humans after urban green space exposure |
| ERP124075 | Fiber derived microbial metabolites protect against maladaptive repair in AKI through G-protein coupled receptors and HDAC inhibition |
| ERP124076 | Hereby, we report a confirmed case of intrauterine SARS-CoV-2 transmission with rapid placental dysfunction and fetal distress. |
| ERP124077 | Soil bacterial community in potato tuberosphere following repeated applications of a common scab suppressive antagonist |
| ERP124081 | The Vaginal Microbiota and Innate Immunity After Local Excisional Treatment for Cervical Intraepithelial Neoplasia |
| ERP124082 | URT1-mediated uridylation shapes poly(A) tails in Arabidopsis |
| ERP124084 | Bovine-TB WGS Validation |
| ERP124087 | A two-day 12h-day/12h-night transcriptome for the benthic diatom Seminavis robusta |
| ERP124088 | Deep sequencing and phylogenetic analysis of SARScov2 strains circulating in North Italy from February to April 2020 |
| ERP124091 | Terrestrial Inputs Shape Coastal Microbial Communities in a High Arctic Fjord (Isfjorden, Svalbard) |
| ERP124092 | Oryza sativa LIGULELESS 2s determine lamina joint positioning and differentiation by inhibiting auxin signaling |
| ERP124093 | Dissecting the protein and transcriptional responses of human immune cells to T cell and monocyte specific activation |
| ERP124104 | Genomics of museum samples reveal the evidence for recent effective population size increase in monarch butterflies. |
| ERP124109 | VESTIGIAL-LIKE 1 IS A SHARED TARGETABLE CANCER-PLACENTA ANTIGEN EXPRESSED BY PANCREATIC AND BASAL-LIKE BREAST CANCERS |
| ERP124110 | Chromosome-scale assembly and analysis of biomass crop Miscanthus lutarioriparius genome |
| ERP124112 | Investigating major recurring Campylobacter jejuni lineages in Luxembourg |
| ERP124114 | Invasion of the beauty rat snake, Elaphe taeniura Cope, 1861 in Belgium |
| ERP124115 | Study of bacterial communities along a permafrost core in a rock glacier of the Ortler-Ortles Alps |
| ERP124116 | Multi-species RELA ChIP-seq of mammalian aortic endothelial cells before and after TNFa stimulation |
| ERP124117 | ChIP-seq of histone marks (H3K27me1, H3K27me3, H3K9me2) and of the H2A.W histone variant in Arabidopsis pol2a mutants. |
| ERP124118 | Microbiome analysis to develop Gardnerella vaginalis abundance threshold to profile and detect potential STI pathogens |
| ERP124121 | Study of fungal communities along a permafrost core in a rock glacier of the Ortler-Ortles Alps |
| ERP124123 | The pangenome analysis of the soil-borne fungal phytopathogen Rhizoctonia solani and development of a comprehensive web resource: RsolaniDB |
| ERP124124 | RNA-seq of MG1655 wt and MG1655 delta-phoB strains grown in MOPS media with low phosphate (0.2 mM) |
| ERP124125 | Ezh2 chip-seq of Th1 and Th2 cells during the first 48 hours of cell differentiation. |
| ERP124126 | Food waste acidogenic fermentation reactor microbiota |
| ERP124128 | Comparative analysis of RNA-seq data from human ALT+ cell lines treated with NR2F2 siRNA |
| ERP124130 | Genome sequencing of a clinical isolate of Mycobacterium microti |
| ERP124131 | RNA-seq of human neuroblastoma cell lines treated with ALKAL2 and/or lorlatinib |
| ERP124132 | Donor-derived vancomycin-resistant enterococci transmission and bloodstream infection after intestinal transplantation |
| ERP124133 | we have performed a transcriptomic analysis to compare the differentially expressed genes between oxytetracycline (OXY) susceptible and resistant strains of A. hydrophila. |
| ERP124136 | A_single_cell_atlas_of_the_Plasmodium_falciparum_journey_through_the_mosquito |
| ERP124142 | Relative gene expression of two transgenic moss (P.pantens) lines. |
| ERP124143 | TCR repertoire profiling of T cells expressing NK-cell markers |
| ERP124146 | Genome sequencing and comparison of representatives of Pseudomonas aeruginosa clone ST235 strains |
| ERP124147 | Dynamics of Extended-spectrum cephalosporin-resistant E. coli in pig farms: a longitudinal study |
| ERP124148 | Genome comparison of Pseudomonas aerugnosa clone ST253 (clone PA14) strain |
| ERP124150 | Ingestion of probiotic (Lactobacillus helveticus and Bifidobacterium longum) alters intestinal microbial structure and behavioral expression following social defeat stress. |
| ERP124151 | Genome sequencing of Mycobacterium microti strains |
| ERP124152 | Determination of Genomic Markers to Conduct Parentage, Differentiate Wood and Plains Bison Sub-species, and Measure Cattle Introgression in Canadian Bison |
| ERP124157 | Bacterial and micro-eukaryotic communities of Arctic thermokarst ponds (Siberia) |
| ERP124158 | Microbiome in acute exacerbation and stable phase of COPD: a descriptive and comparative study of 16s rRNA sequencing and metagenomic sequencing |
| ERP124167 | Genome sequencing of SARS-CoV-2 isolated |
| ERP124171 | RNA-seq of FFPE-macrodissected HGSOC tissues and solid and ascites-derived HGSOC 2D cultures |
| ERP124177 | Adenine auxotrophic strains are widely used, but their response to purine starvation is not studied in detail. We report effects harnessed by purine or nitrogen starvation in purine synthesis ade8 knockout in CEN.PK2-1D strain. |
| ERP124181 | ChIP-seq in sheep alveolar macrophages |
| ERP124182 | monophasic salmonella virchow |
| ERP124186 | The chloroplast genome were assembled and annotated for solanum pimpinellifolium |
| ERP124187 | A standardized reference scheme for cgMLST on P. larvae. |
| ERP124188 | Differences in the gut microbial composition of divergently selected laying hen lines does not affect feather pecking and agonistic behavior |
| ERP124189 | Genetic characterization of the first African swine fever virus isolate from Germany, 2020 |
| ERP124190 | Increased copy number couples the evolution of plasmid horizontal transmission and antibiotic resistance. |
| ERP124192 | Acidithrix sp. C25 was a representative iron snow strain and studies of chemical communication and interspecies aggregation mechanism between Acidithrix sp. C25 and Acidiphilium sp. C61 were conducted. Here we sequenced the whole genome of Acidithrix sp. C25 to broaden our knowledge of its metabolic activities in iron snow microbiome. |
| ERP124194 | Fungal planet description sheets - Dec 2020 |
| ERP124195 | Lifestyles of lake Erken model communities |
| ERP124198 | Transcription Termination and Antitermination of Bacterial CRISPR Arrays |
| ERP124199 | Acidocella sp. C78 was a representative iron snow strain. Here we sequenced the whole genome of Acidocella sp. C78 to reveal its metabolic activities in iron snow microbiome. |
| ERP124200 | This study contains the Illumina paired-end sequencing data of a polled Fleckvieh bull. |
| ERP124201 | Bacterial community dynamics varies with soil management and irrigation practices in grapevines (Vitis vinifera L.) |
| ERP124203 | Re-sequencing of Klebsiella pneumoniae RH201207 |
| ERP124204 | We describe a Lactobacillus paracasei IBR07 (Lacticaseibacillus paracasei) isolated from autochthonous microbiota present in a regional feed product. This strain can resist and persist at low pH and is considered safe for animal feed. The identification of species that can improve the final quality (sensorial and nutritional) of fermented feed constitutes a biotechnological challenge to increase animal production. |
| ERP124207 | Ultraviolet radiation drives DNA damage in a subset of mucosal melanomas |
| ERP124211 | Brevibacterium phoceense |
| ERP124212 | Study of gut microbiota in Schistosoma mansoni-infected WT and HMA mice |
| ERP124213 | Environmental regulation of PndbA, an auto-inducible promoter for two-stage industrial biotechnology in cyanobacteria |
| ERP124215 | Transposable element expression at unique loci in single cells with CELLO-seq |
| ERP124217 | KTRG--B49 samples were collected fromm plants under cold for 4 Clesius 1h,3h,6h,and -2 Clesius 2h ,-4 Clesius 1h,recovery 1day. |
| ERP124221 | Dual RNAseq analyses at soma and germline levels reveal evolutionary innovations in the elephantiasis-agent Brugia malayi, and adaptation of its Wolbachia endosymbionts |
| ERP124222 | Human stool preservation impacts taxonomic profiles in 16S metagenomics studies. |
| ERP124224 | Harmonization of whole genome sequencing for outbreak surveillance of Enterobacteriaceae and Enterococci. |
| ERP124225 | Nitrate-enrichment structures phytoplankton communities in the shallow eastern Mediterranean coastal waters |
| ERP124227 | PRESENCE, PROLIFERATION AND DISTRIBUTION OF BACTERIAL METALDEHYDE-DEGRADING GENES IN SOILS FROM NORTHERN ENGLAND |
| ERP124228 | Genetic map construction of a diploid blueberry mapping population |
| ERP124229 | Genome 3D structure in pig fetal muscle from Hi-C assays of Chromatin Conformation Capture |
| ERP124232 | Evolution_and_lineage_dynamics_of_a_transmissible_cancer_in_Tasmanian_devils___Targeted |
| ERP124233 | Hordeum vulgare subsp. vulgare cultivar 'Morex' assembly (CSS reads with Falcon) |
| ERP124234 | Hordeum vulgare subsp. vulgare cultivar 'Morex' assembly (CSS reads with Hi-Canu) |
| ERP124235 | Hordeum vulgare subsp. vulgare cultivar 'Morex' assembly (CLR reads with wtdbg2) |
| ERP124236 | Hordeum vulgare subsp. vulgare cultivar 'Morex' assembly (CLR reads with MECAT) |
| ERP124237 | Hordeum vulgare subsp. vulgare cultivar 'Morex' assembly (ONT reads with Smart denovo) |
| ERP124238 | Hordeum vulgare subsp. vulgare cultivar 'Morex' assembly (Hybrid assembly with Wengan) |
| ERP124239 | Hordeum vulgare subsp. vulgare cultivar 'Morex' assembly (Short read assembly with TRITEX) |
| ERP124240 | PacBio CCS reads for the barley cv. 'Morex' V3 assembly. |
| ERP124241 | Oxford Nanopore reads raw data for the barley cv. 'Morex' V3 assembly. |
| ERP124242 | Hordeum vulgare subsp. vulgare cultivar 'Morex' assembly (MorexV3) |
| ERP124243 | The intestinal virome in irritable bowel syndrome |
| ERP124246 | Provision of a Sorghum bicolor Multiparent Mapping Population Emphasizing Carbon-Partitioning Dynamics |
| ERP124248 | scospondin mutant embryos |
| ERP124249 | REMOVAL OF ENVIRONMENTALLY RELEVANT CONCENTRATIONS OF THE PESTICIDE METALDEHYDE FROM WATER IN BIOAUGMENTED PILOT-SCALE SLOW SAND FILTERS |
| ERP124252 | ChIP-seq of histone H3 and H3K9me2 in WT and dbl2 mutant fission yeast |
| ERP124253 | RNA-seq analysis of gene expression in macrophages progenitors from the yolk sac of murine embryos at embryonic days 9 and 10, and the modifications resulting from a defective expression of the transcription factor Lyl-1 |
| ERP124254 | Gut microbiota profiles in diarrheic patients with co-occurrence of Clostridioides difficile and Blastocystis |
| ERP124255 | 16s rRNA sequencing analyze the gut microbiota commposition in NAFLD model rats |
| ERP124259 | Whole genome sequencing to investigate a novel mandbulofacial deformity in Hereford cattle |
| ERP124261 | Yersinia ruckeri is the causative agent of enteric redmouth disease (ERM) which causes economically significant losses in farmed salmonids, especially Atlantic salmon (Salmo salar) and rainbow trout (Oncorhynchus mykiss, Walbaum). However, very little is known about the genetic relationships of isolates responsible for disease in these two host species or about factors responsible for disease. Phylogenetic analyses of 16 representative isolates based on the nucleotide sequences of 19 housekeeping genes suggests that Atlantic salmon and rainbow trout isolates represent distinct host-specific lineages. There is evidence of intragenic recombination present within these 19 genes suggestive of horizontal recombination between isolates. Comparative nucleotide sequence analysis of the key outer membrane protein genes ompA and ompF revealed that the corresponding gene trees were both non-congruent with respect to the housekeeping gene phylogenies suggesting that horizontal gene transfer has influenced the evolution of both these surface protein-encoding genes. Analysis of inferred amino acid sequence variation in OmpA identified a single variant, OmpA.1, in serotype O1 and O8 isolates (the typical pathogenic strains in rainbow trout and Atlantic salmon, respectively) that was different from that in isolates of other serotypes. In particular, the amino acid sequence of surface-exposed loop 3 was very different to that of other isolates. These findings suggest that positive selection has likely influenced the presence of OmpA.1 in these isolates and that loop 3 may have an important role in a function of OmpA related to virulence. Amino acid sequence variation of OmpF was greater than that of OmpA and was similarly restricted mainly to the surface-exposed loops. Two OmpF variants, OmpF.1 and OmpF.2, were associated with pathogenic rainbow trout and Atlantic salmon isolates, respectively. These OmpF proteins had very similar amino acid sequences suggesting that positive evolutionary pressure has also favoured the selection of these variants in pathogenic strains infecting both species. |
| ERP124263 | Identifying crossover locations in an Arabidopsis thaliana meiMIGS-PPX1-PPX2 Col x Ler F2 population using genotyping by sequencing |
| ERP124264 | RNA seq of prostate gland from WT, PTEN pc -/- and PTEN pc-/-;P53 -/- mice |
| ERP124265 | Identification of pro-fibrotic macrophages populations by scRNA-seq in West Highland white terriers affected with canine idiopathic pulmonary fibrosis |
| ERP124266 | Polysome profiling analysis of myeloid progenitors of control mice or mice conditionally deficient for Elp3 in the hematopoietic system |
| ERP124267 | Differential gene expression in WT mice and mice lacking PTPN2 in T cells |
| ERP124268 | Ancient DNA preserved in small bone fragments from the P.W. Lund Collection |
| ERP124272 | Two different approaches of microbial community structure characterization in riverine epilithic biofilms under multiple stressors conditions: developing molecular indicators. |
| ERP124276 | ChIP-seq of FOXK2 in human embryonic stem cells H1 ESC, and the differentiated mesendoderm cells and and NPC cells |
| ERP124281 | Endophytic fungal microbiome of wheat |
| ERP124282 | nuntu mtnjgyuy |
| ERP124283 | gut metagenome of HC, IBS, DEP and COMO |
| ERP124290 | RNA-seq of TH-MYCN driven neuroblastoma mice +/- ALK F1178S mutation and +/- ALKAL2 overexpression |
| ERP124291 | 16S rRNA sequences associated with the moss Racomitrium lanuginosum |
| ERP124292 | LARP iCLIP in MDAMB231 cell lines |
| ERP124293 | METHYLGLYOXAL INDUCES SIGNALLING TO PROMOTE THE EARLY DEVELOPMENT OF MAIZE DURING LOW TEMPERATURE CONDITIONS |
| ERP124294 | Acute alcohol injury |
| ERP124296 | scRNA-seq of human fetal intestine tissue |
| ERP124297 | Fecal Microbiota Transplantation Controls Murine Chronic Intestinal Inflammation by Modulating Immune Cell Functions and Gut Microbiota Composition |
| ERP124300 | UploadKongBo |
| ERP124304 | Two new species of the Cocconeis placentula group from Korea |
| ERP124307 | The invasive parthenogenetic marbled crayfish Procambarus virginalis Lyko, 2017 gets foothold in Belgium. |
| ERP124308 | The aim of our study is therefore to evaluate the emergence of CC152 MRSA PVL+ clone in the community and to understand its evolution in France. |
| ERP124309 | Austrian raw-milk hard-cheese ripening involves successional dynamics of non-inoculated bacteria and fungi |
| ERP124310 | Effects of tributyrin on gut microbiota shifts related to performances of weaning piglets |
| ERP124316 | Integrated RNA and DNA sequencing of endocrine resistant breast cancer |
| ERP124317 | Viral metagenomics on fecal samples from Magellanic penguins |
| ERP124318 | Microbial composition of Kefir- UDI strain using shotgun and amplicons metagenomics |
| ERP124321 | In this study, we report the first case of recurrent PJL caused by the same L. monocytogenes strain three years and three months after the first infection. L. monocytogenes. |
| ERP124323 | Within the aim of advancing precision oncology, we have generated a collection of patient-derived xenografts (PDX) characterized at the molecular level, and a preclinical model of colon cancer metastasis to evaluate drug-response and tumor progression. |
| ERP124325 | Power of the crowd: substrate-dependent impact of black soldier fly larvae on bacterial community composition in substrate and larval gut |
| ERP124327 | WES and RNAseq of neuroblastoma cell lines. |
| ERP124328 | WES and mRNAseq of neuroblastoma cell lines. |
| ERP124329 | EMG produced TPA metagenomics assembly of PRJEB15404 data set (Plastic Metagenome Study). |
| ERP124332 | Metagenetic analysis of fungal communities of spoiled and control black olives fermentations and its potential fungal sources in raw materials and process environment. |
| ERP124333 | Metagenetic analysis of bacterial communities of spoiled and control black olives fermentations and its potential microbial sources in raw materials and process environment. |
| ERP124334 | DNA metabarcoding reveals broad presence of plant pathogenic oomycetes in soil from internationally traded plants |
| ERP124335 | Phytophthora ITS1 amplicon Illumina MiSeq sequencing in Andean Patagonia forest soils. |
| ERP124336 | Reconstruction of historic phylogeography of Ostrea edulis of the late 19th century. |
| ERP124337 | Moose genomics and demography |
| ERP124341 | Metagenomic raw data (reads in FASTQ format) from 24 environmental samples of sewage sludge and cattle slurry subjected to the methane fermentation process |
| ERP124342 | RNA-seq of human embryonic stem cells H1 ESC cells and the differentiated NPC cells with FOXK1/2 and SIN3A knock down and the control condition. |
| ERP124343 | Gene-based Association Analysis Suggests Association of HTR2A with Antidepressant Treatment-response in Depressed Patients |
| ERP124347 | Sequence data for A robust phylogenomic framework for the calamoid palms |
| ERP124348 | Assembly patterns of the rhizosphere microbiome along the longitudinal root axis of maize (Zea mays L.) |
| ERP124350 | Functional genomic screens in human cells to identify host factors for SARS-CoV-2 and common cold coronaviruses |
| ERP124352 | Influence of variability in obesity-linked CNS genes on the onset and evolution of eating disorders |
| ERP124353 | RNA-Seq of cultivated (i) bulk human thymic epithelial cells (hTECs) (ii) cortical hTECs (iii) medullary hTECs (iv) human thymic interstitial cells (hTICs) |
| ERP124356 | Genetic ancestry changes in Stone to Bronze Age transition in the East European plain |
| ERP124359 | Acanthopagrus latus (yellowfin sea bream) |
| ERP124360 | Acanthopagrus latus (yellowfin sea bream) |
| ERP124362 | Microbial communities associated with Arabidopsis roots and rhizoplane subjected to a severe drought event and impact of a consortium on alleviating that stress. |
| ERP124365 | Study of the impact of the Arabidopsis thaliana radA mutant on cpDNA |
| ERP124366 | Ancient DNA from Guam and the Peopling of the Pacific |
| ERP124367 | Human adenoviruses (HAdV) associated with pediatric patients in Bern, Switzerland |
| ERP124369 | 16s metagenomes from San Francisco stream (Argentina) |
| ERP124370 | Whole-genome sequencing of SARS-CoV-2 from Covid-19 patients from Belgium |
| ERP124371 | Trimethoprim-resistant methicillin-resistant Staphylococcus aureus ST5 |
| ERP124372 | RNA-seq of yeast cells with mutations of the Rpb4 E19-22 motif |
| ERP124374 | EMG produced TPA metagenomics assembly of PRJNA78025 data set (Human Oral Subgingival Plaque Microbiome). |
| ERP124379 | Microbial modulation via dietary supplementation of quebracho and chestnut tannins in weaning piglets. |
| ERP124380 | WGS of Pasteurellaceae isolated from calves in Denmark |
| ERP124383 | Molecular Profile of Colorectal Cancer in Nigeria |
| ERP124388 | Bacterial and Archaeal community from two contrasting fjords from Chilean Patagonia. |
| ERP124390 | Assembly and longitudinal analysis of childhood gut microbiomes from the TEDDY project |
| ERP124393 | Gut Microbiome Profiling of a Rural and Urban South African Cohort Reveals Biomarkers of a Population in Lifestyle Transition |
| ERP124396 | Whole-genome sequencing of Paraburkholderia type and reference strains |
| ERP124398 | Bioaccessibily and effect on intestinal microbiota of tyrosols from Olea europaea |
| ERP124399 | Tissue-dependent transcriptomic and bacterial associations in primary sclerosing cholangitis-associated IBD |
| ERP124400 | One Day in Denmark 2018 point prevalence survey on fungi |
| ERP124401 | Investigation of the PAR gene conservation in Taraxacum germplasms |
| ERP124403 | In vitro evolution of caspofungin resistance in Candida auris |
| ERP124404 | pancreatic cancer |
| ERP124406 | The complete mitochondrial genome of the lipid-producing yeast Rhodotorula toruloides |
| ERP124409 | RNA-seq for WT and WT+Nitrite/Nitrate vibrio parahaemolyticus. |
| ERP124416 | 25 SARS-CoV-2 sequenced Romanian viral strains, from the first two months of the pandemic |
| ERP124418 | Rediscovery_and_Genomic_Epidemiology_of_Yaws_in_Liberia |
| ERP124419 | The microbial pathology of asthma |
| ERP124420 | Failures of nerve regeneration caused by aging or chronic denervation are rescued by restoring Schwann cell c-Jun |
| ERP124421 | heterorhabditis bacteriophora |
| ERP124423 | LINE-1 DNA methylation levels in DPPA3 KO overexpressing DPPA3 mutants |
| ERP124434 | The influence of alfalfa-switchgrass intercropping on microbial community structure and function |
| ERP124435 | The role of the periplasmic chaperones SurA, Skp and DegP for fitness, outer membrane integrity and virulence of Acinetobacter baumannii AB5075: same-same, but different? |
| ERP124437 | Shotgun metagenomics sequences of gut microbiome from obese rats treated with a panel of weight loss drugs |
| ERP124438 | Amplicon bisulfite sequencing of LINE-1 elements in TET catalytic mutants and DPPA3 KO ESCs rescued by doxycylin induced overexpression |
| ERP124440 | RNA-seq of prostate cancer Patient-Derived Xenografts derived from primary and metastatic tumors at different stages of progression |
| ERP124441 | RNA-Seq analysis of resting and activated mouse Tregs |
| ERP124442 | Deciphering the cross-talk between host and pathogen during intracellular persistence of Staphylococcus aureus within mast cells |
| ERP124443 | Ethylene perception modulates tomato pollen tube growth by altering calcium signaling and cell wall remodeling |
| ERP124444 | Genomic epidemiological study of risk factors associated with MDR-TB transmission in Cameroon |
| ERP124447 | Sodium butyrate supplementation and its influence in cecal microbial modulation |
| ERP124449 | Candidate genes for age at menarche are associated with uterine leiomyoma |
| ERP124450 | Targeted bisulfite sequencing of colon mucosa from healthy women |
| ERP124451 | Transcription profiling by RNA sequencing of MelanA- and caIKK-treated monocyte-derived dendritic cells |
| ERP124452 | Tissue-dependent transcriptional and bacterial associations in primary sclerosing cholangitis-associated inflammatory bowel disease |
| ERP124454 | Differential gene expression in two populations of the wood white butterfly (Leptidea sinapis) from Catalonia and Sweden reared on different host plants, Lotus dorycnium and Lotus corniculatus |
| ERP124455 | Assessment of Biolog EcoplateTM method for functional metabolic diversity of the pig fecal microbiota |
| ERP124459 | Combined CDK4/6 and MEK inhibition in refractory CDKN2A and NRAS mutant melanoma |
| ERP124461 | MtDNA sequences from Sala II and Sala I Neandertals (Slovakia) |
| ERP124462 | RNAseq characterisation of iPSC-derived monocytes, macrophages and dendritic cells and their their primary blood derived counterparts |
| ERP124468 | Disentangling corn root mycobiome in relation to soil physicochemical factors and plant productivity |
| ERP124470 | Alterations in gut microbiota do not play a causal role in diet-independent weight gain caused by ovariectomy |
| ERP124471 | Obesity-related Metabolome and Gut Microbiota Profiles of Juvenile Gottingen Minipigs Long-term Intake of Fructose and Resistant Starch |
| ERP124472 | Gut microbiota-specific IgA+ B cells traffic to the CNS in active multiple sclerosis |
| ERP124478 | Analysis of the oral microbiota composition during four weeks of commercial heliox saturation diving to 200 meters by 16S RNA sequencing |
| ERP124484 | Genome of the oleaginous yeast Rhodotorula toruloides CBS 14 assembled by a combined approach of long- and short read sequencing |
| ERP124486 | Illumina sequencing analysis of mutagenicity of EvoluGene |
| ERP124487 | Russian Chickens |
| ERP124488 | Azithromycin_resistant_Salmonella_Typhi_in_Chandigarh__India |
| ERP124494 | Campylobacter isolates variable, Sweden |
| ERP124497 | Metagenome analysis of fecal microbiota from antibiotic treated mice that presented different susceptibility to VRE infection |
| ERP124498 | In situ incubation in the deep continental subsurface |
| ERP124499 | Relative contributions of egg-associated and substrate-associated microorganisms to Black Soldier Fly larval performance and microbiota |
| ERP124500 | Amplicon sequence of sewage sludge, sewage sludge amended soils and sewage sludge unamended soils |
| ERP124503 | Shotgun metagenomics of total DNA isolated from intestinal content of wild and domestic animals |
| ERP124506 | monophasic variant of Salmonella Typhimurium outbreak in France 2020 |
| ERP124510 | Retrospective analysis of carbapenem-resistant Acinetobacter baumannii over 6.5-year-period in a single hospital |
| ERP124513 | Study coverage of the Arabidopsis thaliana radA mutant on cpDNA |
| ERP124514 | Study recombination of the Arabidopsis thaliana radA mutant on cpDNA |
| ERP124515 | Microbiology and genomics of Acinetobacter baumannii causing neonatal sepsis in a major children's hospital in Vietnam in 2018 |
| ERP124518 | EMG produced TPA metagenomics assembly of PRJNA542280 data set (Oral Microbiome in Fanconi Anemia). |
| ERP124519 | EMG produced TPA metagenomics assembly of PRJNA531081 data set (Sediment Metagenome of River Yamuna (Wazaribad , New Delhi s1)). |
| ERP124520 | EMG produced TPA metagenomics assembly of PRJNA529797 data set (Sediment Microbiome of River Ganga (Jana village , Kanpur s3)). |
| ERP124521 | EMG produced TPA metagenomics assembly of PRJNA529749 data set (Sediment Microbiome of River Ganga (Nawabganj, Kanpur s1)). |
| ERP124522 | EMG produced TPA metagenomics assembly of PRJNA531144 data set (Sediment Microbiome of River Ganga (Lalbag,Murshidabad, west Bangal F3)). |
| ERP124523 | EMG produced TPA metagenomics assembly of PRJNA531106 data set (Sediment Microbiome of River Ganga (Paharghati Dhulian, west Bengal F2)). |
| ERP124524 | EMG produced TPA metagenomics assembly of PRJNA531084 data set (Sediment Microbiome of River Ganga (Below Farakka bridge, west Bengal F1)). |
| ERP124526 | EMG produced TPA metagenomics assembly of PRJNA531097 data set (Sediment Metagenome of River Yamuna (Faizupur Khadar , New Delhi s3)). |
| ERP124527 | EMG produced TPA metagenomics assembly of PRJNA529770 data set (Sediment Microbiome of River Ganga (Jajmau, Kanpur s2)). |
| ERP124531 | Salmonella enterica serovar I.4,5,12:i:- outbreak associated with consumption of horse meat, France |
| ERP124534 | Metagenome analysis of fecal microbiota from mice to test the protective effect of ProBac |
| ERP124535 | starter culture-initiated cocoa fermentations followed up trough metagenetics |
| ERP124536 | CRISPRi-knockdowns of enzymes identify mechanisms that enable metabolic robustness in E. coli |
| ERP124537 | Campylobacter outbreak Sweden 2020 |
| ERP124538 | EMG produced TPA metagenomics assembly of PRJNA531090 data set (Sediment Metagenome of River Yamuna (Okhla Barrage, New Delhi s2)). |
| ERP124539 | Bacteriplankton from Patagoinan shallow lakes |
| ERP124541 | Loci associated with antibody response in feral swine (Sus scrofa) infected with Brucella suis |
| ERP124542 | Whole genome sequencing of several lesser white-fronted goose (Anser erythropus) from diverse locations. |
| ERP124543 | Metatranscriptomic analysis of fecal microbiota from mice to identify the mechanism by which ProBac inhibits VRE colonization |
| ERP124544 | The samples here include 4 different V. minor tissue types and experimental conditions sequenced on the Illumina HiSeq2500 |
| ERP124548 | American Foulbrood disease agent, Paenibacillus larvae, genomic variability in Europe |
| ERP124549 | AST and genomic analysis of 42 S. aureus isolates collected at Fort Portal Regional Referral Hospital, by the hospital microbiology laboratory between 2017 and 2019; primarily derived from skin wounds or suspected urinary tract or bloodstream infections. |
| ERP124551 | Bacterioplankton from Patagonian reservoirs |
| ERP124560 | RNA-seq of zebrafish adult MCU mutant hearts |
| ERP124561 | Genome sequencing of commensal bacteria included in the protective mix ProBac |
| ERP124562 | TCR Amplicon sequencing of the C57Bl/6 CD4+ splenic repertoires induced during a P. chabaudi infection |
| ERP124564 | GENETIC EVALUATION IN CHILDREN WITH EYE ANOMALIES ASSOCIATED WITH CONGENITAL ZIKA SYNDROME |
| ERP124566 | Histone H3 distribution in A. thaliana low rDNA copy line vs WT |
| ERP124567 | Detection of differential RNA modifications from direct RNA sequencing of human cell lines |
| ERP124568 | Genetic analyses of mtDNA (cytochrome-b) of Siberian chipmunks introduced to Europe |
| ERP124570 | EMG produced TPA metagenomics assembly of PRJEB14491 data set (metagenomic Shotgun analysis of cecum microbiome of poultry). |
| ERP124574 | Genome-wide plasma cell-free DNA methylation profiling in pancreatic cancer patients using MeDIP-seq |
| ERP124575 | Histone H3 distribution in A. thaliana low rDNA copy line vs WT |
| ERP124577 | Impact of a probiotic soy beverage supplemented with acerola by-product on gut microbiota from lean and obese subjects assessed in a dynamic in vitro model of the human colon (TIM-2) |
| ERP124581 | Invasive freshwater snails form novel microbial relationships |
| ERP124582 | Evolution of diversity explains the impact of pre-adaptation of a focal species on the structure of a natural microbial community. |
| ERP124583 | Comparative genome analysis of 33 Chlamydia strains reveals characteristic features of Chlamydia psittaci and closely related species |
| ERP124584 | Treponema_Pallidum_genomic_diversity_within_and_between_patients_in_Ghana |
| ERP124586 | Characterization of prokaryotic and microeukaryotic microbiomes of larval pools of mosquitoes sampled in three different countries (Kenya, Guinea Conakry and Burkina Faso) and in laboratory maintained Anopheles lineages. |
| ERP124589 | Providing a snapshot of somatic variation for the patient-derived xenograft cancer models distributed by The Jackson Laboratory. |
| ERP124592 | Staphylococcus aureus reservoirs in renal medicine study |
| ERP124595 | Bacterial gut microbiota composition of Indonesian schoolchildren from urban Makassar - follow-up |
| ERP124597 | A universal protocol for isolating retinal ON bipolar cells across species via fluorescence-activated cell sorting - RNAseq of cell populations |
| ERP124601 | Metabolic alterations of liver Connexin-43 knockout in mice |
| ERP124602 | Transcriptome sequencing of seeds of three rice lines of Kasalath with different anti-aging ability guided by miR164c |
| ERP124604 | MicroRNA expression profile in Newcastle disease virus-infected HeLa cells |
| ERP124606 | Small RNA-sequencing in plasma of acute stroke code patients |
| ERP124607 | Rapid Scanning Electron Microscopy Detection and Sequencing of SARS-CoV-2 and Other Respiratory Viruses |
| ERP124608 | Chromosome-level assembly of the Atlantic silverside genome reveals extreme levels of sequence diversity and structural genetic variation |
| ERP124610 | DNA extraction comparison testing 2019-2020 |
| ERP124611 | GENETIC DIVERSITY OF TWO SPECIES ELEUTHEROCOCCUS MAXIM. ON THE NORTHERN LIMITS OF THEIR DISTRIBUTION |
| ERP124612 | Comparative hormonal and expression analyses of two barley genotypes with contrasting drought tolerance. |
| ERP124614 | RNA-seq analysis of V. minor leaves and roots grown in different light conditions |
| ERP124615 | Biogeography of Microorganisms in Kindergarten Reveals Higher Pathogenic Burden in Children Hands. |
| ERP124617 | A retrospective analysis of Staphylococci species causing neonatal sepsis in low- and middle- income countries |
| ERP124618 | Effect of kefir on soybean isoflavone aglycones content in soymilk kefir |
| ERP124621 | RNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course |
| ERP124622 | RRBP1 rewires Cisplatin resistance in Oral Squamous Cell Carcinoma by regulating YAP-1 |
| ERP124623 | Single-cell 5' Gene Expression and V(D)J Amplification (10X Genomics) of splenic CD4+ T cells from Plasmodium chabaudi infected mice |
| ERP124624 | Long-range sequencing of genomic DNA from rice-infecting Magnaporthe oryzae isolates from Italy |
| ERP124625 | Surgical Menopause and Estrogen Therapy Differently Modulate Changes in Gut Microbiota, Obesity Markers, and Cognitive Health |
| ERP124627 | RNA-Seq, dRNA-Seq and Term-Seq of Streptomyces griseus NBRC13350 and Term-Seq of Streptomyces coelicolor M145 |
| ERP124630 | TGS of HLA-E gene |
| ERP124632 | Whole genome sequencing of Brucella from Ethiopia |
| ERP124633 | Whole genome sequencing of 183 Chinese, Malay and Indian patients from Singapore was conducted to identify genetic variants associated with atorvastatin induced myalgia. Variants that were highly associated with myalgia were identified and incorporated into machine learning models. |
| ERP124634 | Effect of CFB2 depletion in Trypanosoma brucei |
| ERP124638 | Microbiome of Ts65Dn (Down Syndrome model) and WT mice on control and high-fat diet |
| ERP124639 | RNAseq of biopsies of RA patients treated with anti-IL17 |
| ERP124641 | The cellular and molecular pathways affected by IL-12p40/IL-23p40 blockade with ustekinumab in the synovium of psoriatic arthritis (PsA) patients. |
| ERP124642 | Unexpected Mycoplasma hominis infection in two renal transplant recipients traced back to the same donor by whole genome sequencing |
| ERP124643 | Leishmania cosmid library screen with DNDi6148 |
| ERP124645 | BIOME-Preserve: A Novel Microbiome Transport Medium for Culture Recovery |
| ERP124649 | Predictive biomarkers for responsiveness to FOLFOX in gastric cancers based on integrative profiling of patient-derived xenografts |
| ERP124650 | Phylogenetic relationships between the subgenera Phacoxytropis and Tragacanthoxytropis of the genus Oxytropis based on chloroplast DNA and ITS nrDNA sequence data |
| ERP124654 | The carboxylesterase family in salmon lice (Lepeophtheirus salmonis) and its role in drug resistance |
| ERP124655 | Combating antimicrobial resistance in the Norwegian food production chain, NextSeq dataset |
| ERP124656 | CAZymes in Maribacter dokdonensis 62-1 |
| ERP124658 | Transcriptome profiling of Lolium and Festuca spp leaf and root under drought conditions |
| ERP124659 | The emergence of a novel disease in the already declining population of the white-winged snowfinch is of high concern and asks for future monitoring of host and pathogen |
| ERP124660 | The sequences are from a laboratory experiment, where we tested how a legacy of freezing-thawing and drying-rewetting cycle affect the microbial community and its response to an additional fluctuation. |
| ERP124661 | Microbiome of medicinal plants |
| ERP124663 | Diet induces parallel changes to the gut microbiota and problem solving performance in a wild bird |
| ERP124666 | Combating antimicrobial resistance in the Norwegian food production chain, HiseqX dataset |
| ERP124667 | Shotgun sequencing of whole adult Comal Springs Riffle Beetle |
| ERP124668 | JPL Spacecraft Assembly Facility Spore to VO |
| ERP124670 | Deployment of heated panels in the Menai Strait: applications to a temperate ecosystem and community analysis of a short-term deployment |
| ERP124672 | The complete mitochondrial genome of the strawberry aphid Chaetosiphon fragaefolii Cockerell, 1901 (Hemiptera: Aphididae) from California, USA |
| ERP124673 | 16S rRNA amplicon sequence of ileal mucosa bacteria in broiler chickens challenged with NE |
| ERP124674 | Shotgun metagenomic sequencing of the fecal microbiome to predict response to frontline high-dose steroids in patients with lower gastrointestinal acute graft-versus-host disease |
| ERP124678 | Genotyping of Francisella tularensis subsp. holarctica from hares in Germany |
| ERP124679 | PROVIT: Supplementary probiotic treatment and vitamin B7 in depression - a randomized controlled trial |
| ERP124680 | Soil stabilisation for DNA metabarcoding of plants and fungi Implications for sampling at remote locations or via third-parties |
| ERP124684 | Combating antimicrobial resistance in the Norwegian food production chain, Hiseq2500 dataset |
| ERP124685 | Sorghum Whole-genome GBS SNP Genotyping |
| ERP124690 | Genome sequencing of SARS-CoV-2 isolated in Malaysia |
| ERP124691 | periscope: sub-genomic RNA identification in SARS-CoV-2 Genomic Sequencing Data |
| ERP124692 | Tissue-Specific Transcriptome Analysis Reveals Lignocellulose Synthesis Regulation in Elephant Grass |
| ERP124693 | Molecular epidemiology and antimicrobial resistance in clinical Clostridioides difficile isolates from Thailand during 2017-2018 |
| ERP124694 | Biogeography of Microorganisms in Kindergarten Reveals Higher Pathogenic Bacteria Proportion on Children Hands than Daily Items |
| ERP124695 | Long-read sequencing data and hybrid assemblies associated to the study Enterococcus_faecalis_global_phylogeny-sc-5337 |
| ERP124698 | Genomic characterization of Achromobacter spp. isolates from chronic and occasional lung infection in cystic fibrosis patients |
| ERP124699 | Microbiota-root-shoot axis modulation by MYC2 alleviates light 1limitation stress in Arabidopsis, Bacterial Data |
| ERP124700 | Microbiota-root-shoot axis modulation by MYC2 alleviates light 1limitation stress in Arabidopsis, Fungal data |
| ERP124701 | Microbiota-root-shoot axis modulation by MYC2 alleviates light 1limitation stress in Arabidopsis, Oomycetal data |
| ERP124702 | Epidemiological population analysis of Neisseria gonorrhoeae isolates from 2014-2019 from Amsterdam, the Netherlands |
| ERP124704 | Multi-marker DNA metabarcoding reflects tardigrade diversity in different habitats |
| ERP124706 | RNA-seq of Oryza sativa L. Dongjin and Iksan 526 seeds at 20 days after heading |
| ERP124707 | RNA-seq of Trypanosoma brucei brucei ZC3H22 RNAi depletion in procyclic forms |
| ERP124708 | Asymmetric chromosome segregation and cell division in DNA damage-induced bacterial filaments |
| ERP124709 | Genome-resolved metagenomics suggests a mutualistic relationship between Mycoplasma and salmonid hosts |
| ERP124710 | Wadeable stream benthic algae samples collected during annual surveys. DNA sequenced to compare DNA and morphology-based taxonomy. |
| ERP124712 | Effects of AGP Alternatives on broilers under a NE challenge |
| ERP124714 | We investigated the effect of short vs long antibiotic treatments on gut microbiota of patients with Gram-negative bacteremia by whole metagenome shotgun sequencing. |
| ERP124715 | Antimicrobial resistance E_coli in a high artic reindeer subspecies |
| ERP124716 | Large-scale variation in SNP density within the laboratory axolotl (Ambystoma mexicanum) |
| ERP124717 | RNA-seq of H2afj-ko and isogenic WT C57/Bl6-N mouse embryonic fibroblasts in proliferation and after etoposide-induced senescence. |
| ERP124720 | Community shift of a mixed culture during benzene degradation under nitrate reducing conditions |
| ERP124721 | Evaluating the microbial context of SARS-CoV-2 in patients and the hospital built environment |
| ERP124722 | Combating antimicrobial resistance in the Norwegian food production chain, HiSeq2500 rapid run dataset |
| ERP124723 | Asymmetric coalescence of seed and soil microbiota |
| ERP124724 | EPIS Submission on 3 German C. jejuni clusters |
| ERP124725 | Single-cell atlas of the first intra-mammalian developmental stage of the human parasite Schistosoma mansoni |
| ERP124727 | The evolution of phenotypic plasticity in response to temperature stress |
| ERP124728 | KPC containing IncF plasmid genetic diversity between epidemiologically related and unrelated Enterobacteriaceae. |
| ERP124730 | Part of a global study of the evolution and spread of ST-1901. See the paper "Antibiotic treatment regimes as a driver of the global population dynamics of a major gonorrhea lineage", accepted in Mol Biol Evol for more info including additional isolates from other study accessions. |
| ERP124733 | Molecular identification (ITS2 barcoding) of the mosquitoes of the Maculipennis complex in northern Italy |
| ERP124736 | Barcoding of Anopheles labranchiae |
| ERP124737 | NGS data for Salmonella Surveillance in Belgium |
| ERP124738 | MBA DToL legacy data |
| ERP124739 | Compost spatial heterogeneity promotes evolutionary diversification of a bacterium. Published in Journal of Evolutionary Biology. van Houte 2020. |
| ERP124743 | Identifying microbial and physicochemical risks affecting the quality of potable water supplied by selected shallow groundwater wells in Finland |
| ERP124744 | Flooding but not phosphorus availabilities controls the intensity of indigenous arbuscular mycorrhizal colonization in lowland indica rice |
| ERP124747 | RNA-seq of small RNAs in WI-38hTERT/sh3-H2AFJ and WI-38hTERT/sh-NT fibroblasts in proliferation and etoposide-induced senescence |
| ERP124748 | Assembly of L. sativa mtDNA combining Illumina MiSeq paired-end reads and Pacbio SMRT reads |
| ERP124749 | RNA-seq of SARS-CoV-2-infected human primary hepatocyte-derived spheroids upon interferon a2 and baricitinib treatment |
| ERP124750 | Responses of Pseudomonas aeruginosa to last resort antibiotics monitored by transcriptome and translatome analyses |
| ERP124751 | 16S rRNA lung microbiota study in mechanically ventilated patient: a pilot study |
| ERP124752 | Responses of Pseudomonas aeruginosa to last resort antibiotics monitored by transcriptome and translatome analyses |
| ERP124753 | VirION2: a short- and long-read sequencing and informatics workflow to study the genomic diversity of viruses in nature |
| ERP124754 | A study focusing on the characterization of the microbiota of larvae and adults of the Asian tiger mosquito, Aedes albopictus, and on the relative impact of the breeding site water in shaping the bacterial communities. |
| ERP124761 | Low coverage shotgun sequencing of woolly mammoth and ancient canid samples. |
| ERP124763 | Metagenomes of a contaminated urban lake |
| ERP124767 | Response of Salivary Microbiota to Caries Preventative Treatment in Australian Indigenous Children |
| ERP124768 | Genomics, proteomics and phenotypic analysis in 190 strains of E. coli (70) and K. pneumoniae (120) for investigating antimicrobial resistance. |
| ERP124771 | Definition of the insertion profile of Ifp2 transposons containing a NeoR using G401 cells expressing PGBD5 Hs524 using LAM-PCR. |
| ERP124772 | Patients exposed to vancomycin resistant enterococci (VRE) during in-hospital outbreaks in a low endemic setting: who is at risk for acquisition? Report of three outbreaks with VRE in Switzerland, 2018-2019 |
| ERP124774 | TbSAP is a novel chromatin protein repressing metacyclic Variant Surface Glycoprotein expression sites in bloodstream form Trypanosoma brucei |
| ERP124775 | RNaseq of two human LUAD cell lines with knockout of STK11, KEAP1, both genes or no genes. |
| ERP124778 | RNA-seq of rRNA-depleted total RNAs in WI-38hTERT/sh3-H2AFJ and WI-38hTERT/sh-NT fibroblasts in proliferation and etoposide-induced senescence. |
| ERP124779 | Definition of the insertion profile of Tcr-pble transposons containing a NeoR using G401 cells expressing PGBD5 Hs524 using LAM-PCR. |
| ERP124780 | Definition using LAM-PCR of the insertion profile of IFP2 transposons containing a NeoR using the wild type CRD-less PB transposase (1-558) N-terminally fused with a SV40 NLS |
| ERP124781 | RNA-seq of Huh7 cell after G6PD enzyme activity inhibitor RRx-1 treated with 20µM concentrations for 24h |
| ERP124784 | Comparison of Tn-seq of Escherichia coli using B-2163 and MFDpir as donor strains. |
| ERP124785 | An innovative pilot experiment to assess the efficiency of pharmaceutical plant wastewater treatment and the resulting decrease in effluent toxicity to periphytic microbial biofilms |
| ERP124786 | Alteration of gut microbiota in carbapenem-resistant Enterobacteriaceae carriers during fecal microbiota transplantation according to decolonization periods |
| ERP124789 | UI-680 - S. Bovismorbificans outbreak |
| ERP124791 | Assembly of mtDNA from wild lettuce species (L. saligna, L. serriola & L. virosa) |
| ERP124793 | ChIP-seq of RNA polymerase II from WI-38hTERT/sh3-H2AFJ and WI-38hTERT/sh-NT fibroblasts in proliferation and etoposide-induced senescence. |
| ERP124794 | ChIP-seq of H3-K4me3 from WI-38hTERT/sh3-H2AFJ and WI-38hTERT/sh-NT fibroblasts in proliferation and etoposide-induced senescence. |
| ERP124796 | Little parallelism in genomic signatures of local adaptation in two sympatric, cryptic sister species |
| ERP124797 | RNA-Seq of Oryza sativa Dongjin (rice) wild type and gori mutant anthers |
| ERP124798 | Infections of A. thaliana with SynComs of Pseudomonas (PathoCom, CommenCom, MixedCom) |
| ERP124800 | Genomic alterations associated with drug vulnerabilities and prognosis in adenocarcinoma at the gastroesophageal junction |
| ERP124803 | RNA-seq of human donors with severe type 1 interferonopathy due to germline STAT2 gain-of-function |
| ERP124805 | Polyporus tubaeformis (Basidiomycota, Polyporaceae) documented from the Czech Republic, Slovakia and Ukraine |
| ERP124807 | Bionano data used for the Human Genome Structural Variation Consortium analyses |
| ERP124809 | CTCF ChIP-seq for equine FAANG project |
| ERP124810 | E.coli polysome profiling for WT and TrmH strains |
| ERP124817 | HEK293 cells transfected with polychromatic reporter constructs (pJD49 or pKB01) and respective inducer (PIT, ET or tTA) to identify/confirm the splicing patterns obtained. |
| ERP124820 | Exome sequencing Angelman trio |
| ERP124822 | Co-inoculations with rhizobia and arbuscular mycorrhizal fungi alters mycorrhizal composition and lead to synergistic growth effects in cowpea that are fungal species-dependent |
| ERP124823 | Dissecting esophageal squamous-cell carcinoma ecosystem by single-cell transcriptomic analysis |
| ERP124824 | RBGE DToL legacy data |
| ERP124826 | C*01:02 new |
| ERP124829 | Study of bacterial diversity associated with Rubus ulmifolius |
| ERP124834 | Deciphering the cross-talk between host and pathogen during intracellular persistence of Staphylococcus aureus within mast cells |
| ERP124836 | Analysis of human fecal metagenomes from adults and infants, to investigate strain persistance, dispersal and purifying selection of bacterial strains. |
| ERP124838 | Broiler gut metagenome |
| ERP124839 | Genotyping by sequencing of caraway (Carum carvi) |
| ERP124841 | OXF DToL legacy data |
| ERP124844 | NHM DToL legacy data |
| ERP124845 | KEW DToL legacy data |
| ERP124846 | SAN DToL legacy data |
| ERP124851 | Genomic variants associating with canine hip dysplasia |
| ERP124854 | Polyphasic taxonomy lead to new members of the family Cytophagaceae |
| ERP124857 | A chromosome-scale assembly of allotetraploid Brassica juncea (AABB) elucidates comparative architecture of the A and B genomes |
| ERP124858 | We showed that M. ulcerans-specific DNA sequences were detected on the unbreached skin of 6/52 (11.5%) asymptomatic farmers living in Sindou versus 0/52 (0%) of those living in the non-endemic region of Tenkodogo. Then, we cultured the skin microbiota of asymptomatic M. ulcerans carriers and negative control individuals, all living in the region of Sindou. A total of 84 different bacterial and fungal species were isolated, 21 from M. ulcerans-negative skin samples, 31 from M. ulcerans-positive samples and 32 from both. More specifically, Actinobacteria, Aspergillus niger and Aspergillus flavus were significantly associated with M. ulcerans skin carriage. |
| ERP124862 | RNA-seq of biopsies from the bowels of patients with Ulcerative Colitis classified as healed versus non-healed according to different classification scores |
| ERP124863 | Mycobacterium Tuberculosis sequencing |
| ERP124864 | Population genomics of murine Staphylococcus aureus |
| ERP124865 | New members of the family Cytophagaceae |
| ERP124866 | Functional potential of plastic-associated microorganisms |
| ERP124867 | NHM manifest 20201105 |
| ERP124868 | Sanger DToL manifest |
| ERP124870 | Description of a new species of Aureopterix from the Bach-Ma National Park, VIetnam |
| ERP124872 | In this work, we present an improved version of the scheme that is based on the same genes and MLST database as Bom's MLST scheme, but with newly designed primers for nested-1 and nested-2 steps under stringent conditions. Furthermore, we introduce a third primer set for the sequencing step, which considerably improves the performance of the assay. |
| ERP124873 | eDNA metabarcoding reveals dietary niche overlap among herbivores in an Indian wildlife sanctuary |
| ERP124875 | Purified human tRNAPhe analyzed by deep sequencing |
| ERP124876 | Factors shaping bark beetle associated fungal assembleges |
| ERP124878 | antibiotics |
| ERP124881 | Dynamics of extended-spectrum beta-lactamase-producing Enterobacterales colonization in long-term carriers following travel abroad |
| ERP124884 | High-throughput RNA sequencing of trophoblast-like cells conversion from human embryonic stem cells by BMP4 |
| ERP124886 | Brucella abortus ChipSeq analysis of BvrR |
| ERP124887 | Characterization of the novel Kotalahti bat lyssavirus |
| ERP124889 | RBGE_0002 |
| ERP124890 | MBA_0003 |
| ERP124891 | MicroRNAs regulate metabolic phenotypes during Multicellular Tumor Spheroids progression |
| ERP124892 | Whole genome sequencing of three samples of Capsella bursa-pastoris in North Italy |
| ERP124894 | oral metagenome |
| ERP124895 | SARS-CoV-2 genome sequences collected in Bern, Switzerland |
| ERP124897 | A collection of Candida albicans aneuploid strains |
| ERP124898 | ToL_Meiofauna_R_D |
| ERP124900 | Wheat genetic variation map 1.0Â |
| ERP124902 | EMG produced TPA metagenomics assembly of PRJNA419239 data set (Microbial communities in two hot springs sediments derived from the Kamchatka peninsula). |
| ERP124904 | Tn-seq of Vibrio cholerae in presence of 0.2% of L-arabinose |
| ERP124906 | Effects of expressing fungal glucuronoyl esterase in aspen on transcriptome in different tissues |
| ERP124910 | A taxon-wise insight into rock weathering and nitrogen fixation functional profiles of proglacial systems |
| ERP124911 | Selection for virulence against resistance in the potato cyst nematode Globodera pallida. |
| ERP124914 | Identification of Leukemia-associated mutations in AML patients |
| ERP124917 | organic carbon, predator, resistance and resilience, community stability, urban river, aquatic microbial community |
| ERP124920 | First report of European mountain ash ringspot-associated virus in serviceberry (Amelanchier spp.) in Sweden |
| ERP124921 | EMG produced TPA metagenomics assembly of PRJEB19090 data set (Potential and active functions in the gut microbiota of a healthy human cohort). |
| ERP124922 | Effect of Spent Coffee grounds on rumen bacterial population |
| ERP124925 | Changes in Pdgfra-positive mesenchymal progenitors during muscle regeneration under normal and obese condition. |
| ERP124926 | Origin and evolutionary history of Pyricularia oryzae fungal pathogens infecting maize and barnyard grass in Iran |
| ERP124928 | scRNA-seq of human fetal duodenal enteroids grown in EGF and/or NRG1 |
| ERP124929 | Land use in urban areas impacts the composition of soil bacterial communities involved in nitrogen cycling: A case study form Lefkosia (Nicosia) Cyprus |
| ERP124930 | Swedish meningococcal carriage study performed in 2018-2019. |
| ERP124932 | EMG produced TPA metagenomics assembly of PRJNA335670 data set (Metagenomic Sequencing of Hot Springs from Central India). |
| ERP124933 | EMG produced TPA metagenomics assembly of PRJDB7293 data set (Metagenomic analysis of Kirishima hot springs). |
| ERP124935 | Cetacean Morbilli virus H gene sequence and phylogenetic analysis |
| ERP124942 | Reducing the Impacts of Biofouling in RO Membrane Systems through In Situ Low Fluence Irradiation Employing UVC-LEDs (doi: 10.3390/membranes10120415) |
| ERP124943 | Solvent tolerant bacteria from hydrocarbon contaminated habitats |
| ERP124944 | Local immune response to dietary antigens triggered by bacterial infection leads to food-induced abdominal pain |
| ERP124946 | Circadian rhythm of the fecal microbiota in laying hens |
| ERP124947 | As an important part of biological rhythm, circadian rhythm plays a crucial role in the microbiota composition of laying hens. The purpose of this experiment was to investigate the circadian rhythm of fecal microbiota in laying hens. |
| ERP124949 | A metabarcoding comparison of taxonomic richness and composition between the water column and the benthic boundary layer. |
| ERP124953 | Genome-wide relatedness shapes predatory behavior of Pristionchus pacificus |
| ERP124954 | Utilisation of next generation sequencing technology to support meat safety and shelf life extension |
| ERP124955 | PopGen 16S rRNA gene skin 2020 |
| ERP124956 | SARS-CoV-2 was grown by inoculation of VeroE6 cells with 200 µl nasopharyngeal swab of a COVID-19 patient. |
| ERP124958 | EMG produced TPA metagenomics assembly of PRJNA649273 data set (Kidney stone patient microbiome). |
| ERP124959 | EMG produced TPA metagenomics assembly of PRJNA311332 data set (Bacteria isolated from carboxylate platform fermentations inoculated with microbial communities from extreme environments.). |
| ERP124960 | Retrospective surveillance of necrotising typhlitis associated with Brachyspira spp. in British rhea |
| ERP124961 | Interaction of intestinal bacteria with human rotavirus during infection in children |
| ERP124964 | Whole-genome resequencing confirms reproductive isolation between sympatric demes of brown trout (Salmo trutta) detected with allozymes |
| ERP124965 | Klebsiella pneumoniae genome sequencing |
| ERP124967 | Cellular and extracellular vesicle RNA sequence for E-cadherin-RFP EMT reporter system expressing mouse breast cancer cell line Py2T during EMT/MET |
| ERP124970 | African Leopard - Population Genomics |
| ERP124971 | Transcriptome analysis of 3D model of blood-brain barrier exposed to Borrelia garini |
| ERP124972 | RNA-seq of mouse small intestinal organoids treated with interferon-gamma |
| ERP124975 | Genomic insights of the globally disseminated multidrug-resistant K. pneumoniae Clonal Group 147 |
| ERP124979 | Biannual administrations of azithromycin and the gastrointestinal microbiome of Malawian children: A nested cohort study within a randomized controlled trial |
| ERP124981 | Heterogeneous hunter-gatherer and steppe-related ancestries in Late Neolithic and Bell Beaker genomes from present-day France |
| ERP125025 | RNA-seq of mouse small intestinal epithelial cells sorted from duodenum, jejunum and ileum |
| ERP125026 | Transcriptome analysis of 3D model of blood-brain barrier exposed to West Nile virus (WNV) |
| ERP125027 | Comparative whole-exome and UTR sequencing of non-muscle invasive urothelial carcinomas and metachronous muscle invasive urothelial carcinomas of the urinary bladder. |
| ERP125031 | mutational analysis of exostosin 1 mutations in Jordanian patients with heredietary Osteochondroma |
| ERP125033 | EMG produced TPA metagenomics assembly of PRJNA528468 data set (CH09 Metavirome). |
| ERP125034 | Meningococcal ST-4821 complex – western clade, sexual transmission, antibiotic susceptibility, vaccine coverage |
| ERP125035 | Whole genome sequence-based surveillance of Streptococcus agalactiae group B strains in Portugal |
| ERP125039 | Effects of Mesobiliverdin IX-Enriched Microalgae Feed on Gut Health and Microbiota of Broilers |
| ERP125043 | No alteration of gut microbiota in patients with myasthenia gravis compared to control patients: results from the MYBIOM trial |
| ERP125044 | The enhancing effects of bacterial community on phosphorus retaining in sediment |
| ERP125046 | WGS of Neisseria meningitidis |
| ERP125047 | Differential degradation of RNA species by autophagy related pathways in plants |
| ERP125049 | Effects of Mesobiliverdin IX alpha-Enriched Microalgae Feed on Gut Health and Microbiota of Broilers |
| ERP125052 | Transcriptome analysis of 3D model of blood-brain barrier exposed to tick-borne encephalitis virus (TBEV) |
| ERP125056 | Genomic shotgun sequences of Trypanosoma brucei brucei from Uganda |
| ERP125062 | Bulk RNA-seq analysis of Btk-deficient leukemia |
| ERP125065 | 16S rRNA sequencing of samples from universal stool bank donors |
| ERP125068 | Equine FAANG ATAC-seq Pilot |
| ERP125069 | Root-associated mycobiomes of common temperate plants (Calluna vulgaris and Holcus lanatus) are strongly affected by winter climate conditions. |
| ERP125070 | Ancient Mammalian and Plant DNA from Late Quaternary Stalagmite Layers at Solkota Cave, Georgia |
| ERP125076 | Description of the farmed Atlantic salmon gill microbiome during an Amoebic Gill Disease episode along the West Coast of Ireland |
| ERP125077 | Influence of the amoebic gill disease on the Atlantic salmon (Salmo salar L.) gill microbiome in a laboratory scale trial: bacterial immigration from the surrounding water. |
| ERP125079 | Repeated hybridisation increased diversity in the door snail complex Charpentieria itala in the Southern Alps |
| ERP125084 | Sample od DVMO Brasil, with new allele HLA-DRB1*03. |
| ERP125088 | Peromyscus maniculatus Genetic Variant Analysis |
| ERP125089 | EMG produced TPA metagenomics assembly of PRJNA339844 data set (subsurface metagenome Metagenome). |
| ERP125090 | The history of maize domestication and adaptation as revealed by a genome-wide survey of SNP |
| ERP125093 | Comparative study of different approaches to use MinION on a routine basis of infection diagnosis |
