AccessionTitle or Alias
ERP123107MHs BGA forensic
ERP123108Targeted insertion for human genome engineering
ERP123109Whole shotgun metagenomic sequencing from stool samples from calcium oxalate kidney stone formers and healthy control participants
ERP123112SNPs of bone morphogenetic protein 7 in the razor clam Sinonovacula constricta
ERP123113Whole-genome sequencing data generated for the remains of four Pleistocene wolf specimens from sites in Northeast Siberia.
ERP123121Dwarfism in Tibetan Terriers with an LHX3 mutation
ERP123124Resolving generic limits in Cyperaceae tribe Abildgaardieae using targeted sequencing
ERP123125This study contains raw paired-end fastq files and pre-processed alignment files (CRAMs) that have been used to study the effect of domestication in various water buffalo breeds
ERP123127Enrichment of hydrogen oxidizing bacteria from high temperature and salinity environments
ERP123128Genome sequences of Acinetobacter baumannii from multiple sources and studies
ERP123130Peg13 regulates sexual preference
ERP123132Illumina paired end reads of an adult beetle of Chrysochus auratus
ERP123138Cells of the adult human heart
ERP123139RNAseq of two contagious cancer cell lines in the Tasmanian devil, Devil Facial Tumour 1 (DFT1) and Devil Facial Tumour 2 (DFT2)
ERP123141Murine gut microbiome in response to antibiotic exposure and colonization with vancomycin resistant Enterococcus faecium
ERP123143Understanding the role of CXCL4 in the initiation and progression of bone marrow fibrosis
ERP123144Wesmaelius (Kimninsia) nervosus (Fabricius, 1793) (Neuroptera, Hemerobiidae) a new species of brown lacewing for the Portuguese fauna
ERP123146Longitudinal metagenomic analysis of the gut microbiome in preterm infants diagnosed with necrotising enterocolitis and matched controls
ERP123149Genomic investigation of hominine herpes simplexvirus evolution
ERP123156temperature effects on aquifer microbial communities
ERP123157scRNA-seq of mESC and mouse CD4+ cells using different buffers and enzymes
ERP123159Multi-taxa assessment of microplastics on soil microbiome - Fungi
ERP123160Diesel exhaust particles alter the composition and function of the gut microbiota upon chronic oral administration in mice
ERP12316316S rRNA gene sequencing to identify bacterial pathogens in blood from infective endocarditis patients
ERP123164Diesel exhaust particles alter the composition and function of the gut microbiota upon chronic oral administration in mice - (C57Bl/6)
ERP123166Post-meiotic expression of Mkk7 in mouse testis
ERP123168Guyana
ERP123169PhylogroupE
ERP123171Autosomal Genetics and Y-chromosome Haplogroup L1b-M317 Reveal Mount Lebanon Maronites as a Persistently Non-Emigrating Population
ERP123173SARS-CoV-2 genomes from late April in Stockholm, Sweden
ERP123180classIIextension-DR10
ERP123181Experimental infection supports the potential role of raccoon dogs (Nyctereutes procyonoides) as intermediate host for SARS-CoV-2
ERP123184CRISPR tools for zebrafish
ERP123189Gut microbes in Enshi black pigs
ERP123193Brachypodium distachyon epigenetic diversity (WGBS and RNA-Seq)
ERP123196Key role of IRX5 in human ventricular conduction
ERP123202Study of bacterial community in river sediments before and after effluents of Waste water treatment plants WWTP
ERP123206Directed evolution of microbial co-cultures for improved production of costly metabolites
ERP123207Identifying crossover locations in Arabidopsis thaliana sni1 Col-0 x Ct-1 F2 populations using genotyping-by-sequencing
ERP123212Population_structure_of_Mycobacterium_bovis_in_Southern_Brazil
ERP123213Comparative Subsequence Sets Analysis (CoSSA) is a robust approach to identify haplotype specific SNPs; mapping and pedigree analysis of a potato wart disease resistance gene Sen3
ERP123214SHAPE: Barley cv. Morex CLR assembly
ERP123215AnTIC: Uro-associated E. coli Genome Analysis
ERP123216Multi-taxa assessment of microplastics on soil microbiome - Prokaryotes
ERP123220Effect of Supplementation with Synbotic Ice Cream on the immune response, health in general and parameters related to the gut-brain axis in military submitted to field training
ERP123221Rapid size change associated with intra-island evolutionary radiation in extinct Caribbean “island-shrews”
ERP123222Motilimonas cestriensis (strain MKS20)
ERP123223ZIKV strain sequencing including African strains
ERP123225MNase sequencing of macronuclei from vegetative Paramecium tetraurelia
ERP123227Gut microbiome of virally-infected C57BL/6 mice
ERP123229Effect of Supplementation with Synbotic Ice Cream on the immune response, health in general and parameters related to the gut-brain axis in military submitted to field training
ERP123231HGSVC JAX Hi-C Data
ERP123232Gut Microbiomes of European Turkey and Veal Calf Herds
ERP123234Draft Genome Sequence of Fusarium equiseti K3, a fungal species isolated from Hexachlorocyclohexane (HCH) contaminated soil
ERP123235Isolation and identification of Predatory bacteria and study of its power of degradability on common burn wound infections
ERP123237In vivo reporter assays uncover changes in enhancer activity caused by type 2 diabetes associated SNPs
ERP123238Olive viruses in Albania
ERP123239Microbiome analysis and predicted relative metabolomic turnover suggests bacterial heme and selenium metabolism are altered in the gastrointestinal system of zebrafish (Danio rerio) exposed to the organochlorine dieldrin
ERP123241Premature atherosclerosis in a patient with hypertriglyceridemia
ERP123242In_vivo_CRISPR_activation_screen_to_identify_novel_membrane_proteins_enhancing_pulmonary_metastatic_colonisation
ERP123244Genetic etiologies of GnRH deficiency
ERP123247Antibiotic resistome in Swiss river streams
ERP123248Comparison of the genital microbiomes of pregnant Aboriginal and Non-aboriginal women
ERP123249WGS reveals a likely long-term prevalent status for a predominant Beijing strain in Colon, Panama
ERP123251Reprogramming of bone marrow myeloid progenitor cells in patients with severe coronary atherosclerosis
ERP123255Multi-taxa assessment of microplastics on soil microbiome - Cercozoa
ERP123256Single cell transcriptome profiling of the Atlantic cod immune system
ERP123257Delayed Establishment of Gut Microbiota in Infants Delivered by Cesarean Section
ERP123262Complete genome sequence of Microbacterium sp. strain Nx66, isolated from petrochemical contaminated waters of El Saf-Saf valley in Algeria
ERP123263Miseq Whole Genome Sequencing of Micobacterium Avium Paratuberculosis clone isolated in Emilia Romagna (Italy) within a single herd
ERP123264RNA samples in Ovary of Pigs
ERP123265Mycobacterium tuberculosis IHU, France
ERP123267RNA samples in Hypothalamus of Pigs
ERP123268No tangible effects of field-grown cisgenic potatoes on soil microbial communities
ERP123269Integrative computational analysis of the substantia nigra pars compacta and the locus coeruleus
ERP123273Effect of functional food ingredients on gut microbiota in a rodent diabetes model
ERP123275Quantitative trait locus analysis of parasitoid counteradaptation to symbiont-conferred resistance
ERP123277Heterogeneity of a dwarf phenotype in Dutch traditional chicken breeds revealed by genomic analyses
ERP123279Transcriptome Profiling of Human Monocyte-Derived Macrophages Upon CCL2 Neutralization Reveals an Association Between Activation of Innate Immune Pathways and Restriction of HIV-1
ERP123281RNA samples in Hypothalamus of Pigs
ERP123282RNA samples in Ovary of Pigs
ERP123283Core and accessory genome comparison of Australian and International Strains of O157 Shiga Toxin-Producing Escherichia coli.
ERP123287Impact of early empiric antibiotic use on the gut microbiota in very low birth weight preterm infants
ERP123288Food resource sharing of alder leaf beetle specialists as potential insect-plant interface for horizontal transmission of endosymbionts
ERP123293In situ structural analysis of SARS-CoV-2 spike reveals flexibility mediated by three hinges
ERP123294Metagenomic analysis of wastewater
ERP123295Proxy upload by EnteroBase (from database Escherichia/Shigella)
ERP123296Proxy upload by EnteroBase (from database Vibrio)
ERP123297Proxy upload by EnteroBase (from database Clostridioides)
ERP123298Proxy upload by EnteroBase (from database Moraxella)
ERP123299Proxy upload by EnteroBase (from database Yersinia)
ERP123300Proxy upload by EnteroBase (from database Helicobacter)
ERP1233011265_PK_MY_GRIGG
ERP123302RNA sequencing analysis showing the genes that are differentially regulated by ZNF528-WT or ZNF528-c.1282C>T
ERP123304ATR restrains DNA synthesis and mitotic catastrophe in response to CDC7 inhibition
ERP123305Aim of the study was the genetic characterization of the whole genome of twoLA-MRSA strains isolated in Greece
ERP123307Strand-seq data of HGSVC2 samples
ERP123311Alternative splicing analysis of HPO tissues during pubertal transition in gilts
ERP123315Whole-genome, sex-specific pooled sequencing of two Formica aquilonia x Formica polyctena hybrid lineages
ERP123320Sequencing of SARS-CoV-2 genomes from coronavirus infected patients from Poland
ERP123321Surfactin stimulated by root molecular patterns acts as a key driver of Bacillus-plant mutualistic interaction
ERP123322Microbial EPS production from various substrates
ERP123323Whole genome sequencing and assembly of Moricandia species
ERP123327Acomys russatus (golden spiny mouse)
ERP123328Onychomys torridus (southern grasshopper mouse)
ERP123329Genome-wide chromatin binding of ZNF528-WT and ZNF528-c.1282C>T in Saos-2 cells.
ERP123330Klebsiella phage vB_KaS-Benoit, whole genome
ERP123331chip seq
ERP123333Distinct lung microbiota associate with HIV-associated chronic lung disease in children
ERP123334Microbial Diversity in Environment of Aseptic Ward
ERP123335Microbial communities in maize rhizosphere
ERP123336chipseq data
ERP123338Characterization of the bacterial communities of triatomine genera, the insect vectors of Trypanosoma cruzi, the causative agent of Chagas disease.
ERP123339Molecular systematics of Crassiphycus and Hydropuntia (Gracilariales, Rhodophyta) with the description of poorly known taxa in the Western Atlantic Ocean
ERP123340Rhizosphere soil metagenome
ERP123342We PacBio sequenced eight serially-isolated pairs of Shigella flexneri isolates from an epidemic sub-lineage of MSM-associated S. flexneri 3a.
ERP123343Sequence-Function mapping of MKK1-ERK2 interactions reveals positive epistasis in the MKK1 D-domain
ERP123344Sequencing of ITS2 from American Anopheles punctipennis mosquitoes.
ERP123346Australian marsupial phylogeny with denovo assembly of target exons captured sequences.
ERP123347Effects of arbuscular mycorrhiza on transcriptome of fruits from a commercially used tomato cultivar grown in hydroponics
ERP123348Transcriptome and DNA (hydro)methylation in mouse hypothalamic arcuate nucleus in puberty onset.
ERP123351Sequencing of small RNAs from C. elegans MA lines to study Transposable Element Expression
ERP123355ChRO-seq on TeloHAEC cells before and after TNFa stimulation
ERP123356RNA-seq of the developing human eye (Day 41-44 of embryonic development) comparing gene expression in ventral optic fissure margins with dorsal optic cup
ERP123357RNA-Seq of developing mouse eye (E11.5 and E12.5) comparing optic fissure margins with dorsal optic cup
ERP123358RNA-seq of mouse alveolar macrophages from control and Influenza A virus infected animals
ERP123359High accuracy gene expression profiling of sorted cell subpopulations from breast cancer PDX model tissue
ERP123362RNA-seq of Streptococcus thermophilus N4L grown in two different yeast extracts
ERP123366Age patterning in the wild chimpanzee gut microbiota
ERP123367increasing pH to shape the chain elongation reactor microbiota
ERP123368The intestinal microbiome, weight and metabolic changes in women treated by adjuvant chemotherapy for breast and gynecological malignancies.
ERP123369Breast-milk derived potential probiotics as strategy for the management of childhood obesity
ERP123370virulence factors in Aeromonas veronii
ERP123371Study A small protein regulates cell division
ERP123375The IgA-Seq method is used to identify which commensal bacteria are bound by host IgA. This study provides a comprehensive investigation of the IgA-Seq method, describing a highly optimised protocol for IgA-Seq from gastrointestinal samples and new analytical techniques that improve the accuracy of quantification of taxon-level IgA binding estimates.
ERP123376Transcriptome and DNA (hydro)methylation in mouse hypothalamic arcuate nucleus in puberty onset
ERP123377Universal antimicrobial resistance detection from clinical bacterial isolates using proteomics
ERP123379De-novo assembly and SV analysis of a 115-year-old Dutch cognitively healthy woman
ERP123380High throughput sequencing provides exact genomic locations of inducible prophages and accurate phage-to-host ratios in gut microbial strains
ERP123382NGS data of Listeria monocytogenes surveillance in Belgium
ERP123383Taxonomic, functional and ecological inventory of 67 full-scale biogas digesters
ERP123385Motilimonas eburnea
ERP123386Swine leukocyte antigen diversity of Kenyan domestic pigs and warthogs
ERP123388Microbial communities in urban recreational surface waters in Bogotá, Colombia using Next Generation Sequencing
ERP123390Targeting EHMT1/2 sensitizes colorectal cancer to pan-HDAC inhibitors
ERP123397Bacterial communities of arthroplasty patients before and after decolonisation treatments: Analysis by targeted 16S rRNA and staphylococcal-specific gene sequencing
ERP123399Reference-free reconstruction and quantification of transcriptomes from Nanopore long-read sequencing
ERP123400The application of Gramine shapes the bacterial communities thriving at the barley root-soil interface
ERP123401Mycobacterium tuberculosis Genetic Network in Lima
ERP123403Xylophagaidae marker genes
ERP123405RNA-seq analysis of a mutualistic association between perennial ryegrass (Lolium perenne) and its fungal endophyte Epichloë festucae var. lolii.
ERP123408Genome-wide association study reveals genes associated with the absence of intermuscular bones in tambaqui (Colossoma macropomum)"
ERP123409Unprocessed Illumina MiSeq 2x250 sequence from viral-like particle preparations from children enrolled in an oral Rotarix study.
ERP123410novel in-situ microbial enrichment
ERP123413Bluetongue Virus MNG1/2018 segment 1-10 complete genome
ERP123414Deep whole-genome sequencing of SARS-CoV-2 patient samples from Austria.
ERP123415Bluetongue Virus MNG2/2016 segment 1-10 complete genome
ERP123416Bluetongue Virus MNG3/2016 segment 1-10 complete genome
ERP123418New ITS2 amplicons of soil fungi
ERP123419Parallel gene expression evolution in natural and laboratory evolved populations
ERP123420Collection of reference strains for sero- and virulence typing of E. coli
ERP123422Analysis of genetic diversity in cetacean morbilliviruses
ERP123423Campylobacter jejuni from canine and bovine cases of campylobacteriosis express high antimicrobial resistance rates against (fluoro)quinolones and tetracyclines
ERP123424PfCSP in Senegal
ERP123425Gene expression changes in mouse dendritic cell line DC2.4 infected with mouse cytomegalovirus (MCMV) at 3 and 18 hours post-infection
ERP123426UK Industrial Anaerobic Digestors
ERP123432Landoltia punctata shotgun WGS sequencing, clone 7260
ERP123433DZIF study R-Net Klebsiella pneumoniae
ERP123434Hereditary sensory and autonomic neuropathy in a family of mixed breed dogs is associated with a novel FAM134B (RETREG1) mutation
ERP123435Identification of a Mutation in NDP Associated With X-Linked Retinal Dysplasia in the English Cocker Spaniel
ERP123437A new Pseudomonas species, isolated from charcoal
ERP123438Genomic novelty and process-level convergence in adaptation to whole genome duplication
ERP123440E. faecium bacteriophages and bacteriophage resistant E. faecium strains
ERP123442We analyze the genetic composition,demographic history and natural selection in Peruvian Natives from Andes and Amazon
ERP123443De novo assembly of Tibetan semi-wild wheat Zang1817 genome
ERP123444Dissecting the role of the Tumor Suppressor UTX in cancer development
ERP123445Complex Internal Microstructure of Feather Follicles on Chicken Skin Promoted the Bacterial Cross-contamination of Carcass during the Slaughtering Process
ERP123447Crocidura russula in Italy
ERP123448ESOPHAGEAL MICROBIOME IN ACTIVE EOSINOPHILIC ESOPHAGITIS AND CHANGES INDUCED BY DIFFERENT THERAPIES
ERP123449The pangenome analysis of the soil-borne fungal phytopathogen Rhizoctonia solani and development of a comprehensive web resource
ERP123451RAD-seq of AMPRIL (Arabidopsis multiparent RIL population)
ERP123455Morphogenesis of phototrophic biofilms is controlled by hydraulic constraints and enabled by architectural plasticity
ERP123456SARS-CoV-2 phylogeny during the early outbreak in the Basel area, Switzerland: import and spread dominated by a single B.1 lineage variant (C15324T)
ERP123462Effects of 16O Charged-Particle Irradiation on Cognition, Hippocampal Morphology and Mutagenesis in Female Mice
ERP123463The effect of probiotics supplementation on gut microbiota after Helicobacter pylori eradication: a multicenter, randomised controlled trial
ERP123464Fitness effects for Ace insecticide resistance mutations are determined by ambient temperature
ERP123465The Epidome - A species-specific approach to assess the population structure and heterogeneity of Staphylococcus epidermidis colonization and infection
ERP123467This is a metagenetic study on Nyons table olives bacterial communities
ERP123468This is a metagenomic study on Nyons table olive fungal communities
ERP123469Quantifying sequencing error and effective sequencing depth of liquid biopsy NGS with unique molecular identifier error correction
ERP123470DELETE THIS
ERP123471mRNA sequencing of Coffea leaves exposed and not exposed to hexanoic acid
ERP123472RNAseq of A/J mice spiral ganglion derived neurospheres vs differentiated auditory neurons
ERP123477EMG produced TPA metagenomics assembly of PRJEB8094 data set (The initial state of the human gut microbiome determines its reshaping by antibiotics).
ERP123480WGS of quinoa genotypes
ERP123482Assessing the Phylogeographic Distribution of Candidatus Cardinium hertigii in Culicoides
ERP123484Isolation and characterization of nitrate-reducing bacteria as potential probiotics for oral and systemic health
ERP123485The impact of helminth infection on the mucosal and luminal GI microbiota of the horse
ERP123487RNA sequencing from mouse, pig and human precision cut lung slices (PCLS)
ERP123488A 16S amplicon survey of activated sludge plants in the English Midlands.
ERP123489A survey of anaerobic digesters treating sludge from wastewater treatment plants in on in Northwest England.
ERP123490A selection of Norwegian soil samples sequenced to obtain data to fit a diversity model
ERP123497Metalimnetic chlorophyll maxima in Lake Kinneret - Chlorobium revisited
ERP123498Sequencing data for 29 African cattle from Senegal and Burkina Faso generated with Illumina HiSeq X Ten
ERP123500Microbial community composition of intertidal sediments within the discharge area of a shallow subterranen estuary
ERP123506Pristionchus pacificus transcriptome
ERP123507The potency of gepotidacin and zoliflodacin in fluoroquinolone-resistant Escherichia coli upon tolC inactivation.
ERP123508Favipiravir-resistant influenza A virus shows potential for transmission
ERP123509Visual mate preference evolution during butterfly speciation is linked to neural processing genes
ERP123511Single cell RNA sequencing of paired non small cell lung carcinoma tissue and peripheral blood from 5 donors
ERP123513Extreme enrichment of VNTR-associated polymorphicity in human subtelomeres: genes with most VNTRs are predominantly expressed in the brain
ERP123515Re-assembly of 19th-century smallpox vaccine genomes reveals the contemporaneous use of horsepox and horsepox-related viruses in the United States
ERP123516Analysis of Klebsiella spp in wastewater from a hospital drain and WWTP influent in South West England.
ERP123518Potato virus X
ERP123520RNA-Seq of mouse lung vaccinated with subcutaneous BCG and two novel tuberculosis mucosal boosting nanovaccines
ERP123521Single cell transcriptional profile of third instar larval wing discs in Drosophila
ERP123526RNA-seq of Drosophila simulans and Drosophila mauritiana developing male genitalia
ERP123531The dynamic changes of gut microbiota during the perinatal period in sows
ERP123536RNA-seq of human hypertrophic scar fibroblast cell treated with pcolce siRNA against untreated controls
ERP123537RNA-seq of human hypertrophic scar fibroblast cell treated with fkbp10 siRNA against untreated controls
ERP123542An integrated multi-omics protocol for swine feces reveals congruent longitudinal dynamics in microbiome structure and function
ERP123545Characterization of the fecal microbiota of healthy horses
ERP123546Epidemiology of chikungunya virus across neglected regions of Indonesia
ERP123548Genome evolution under sexual and asexual reproduction (Mite genomes)
ERP123550Deletion of miRNA-22 induces cardiac hypertrophy in females but attenuates obesogenic diet-mediated metabolic disorders
ERP123553Sequencing of two Syndiniales dinoflagellate species, Amoebophrya spp. A25 and A120
ERP123555Synthesis and characterization of peptides derived from spider venom: towards the development of new antimicrobials.
ERP123558Targeted sequence capture of Orientia tsutsugamushi DNA from chiggers and humans
ERP123560Urinary microbiota and bladder cancer
ERP123561EMG produced TPA metagenomics assembly of PRJEB34410 data set (Secrets of the hospital underbelly: abundance of antimicrobial resistance genes in hospital wastewater reflects hospital antimicrobial use and inpatient length of stay).
ERP123562scATAC-seq of mouse Plasmodium-specific CD4+ T cells
ERP123564EMG produced TPA metagenomics assembly of PRJEB15448 data set (The influence of chitin addition on the lettuce rhizosphere microbiome).
ERP123565Brucella suis biovar 2 isolates from free-ranging wild boars in canton Bern
ERP123566Assembly of Triticum aestivum cv. 'Norin61' as part of the 10+ Wheat Genomes Project.
ERP123567RNA-seq analysis of substates of human pluripotent stem cells with mesoderm bias and early differentiating cells towards the mesoderm lineage
ERP123569Single-cell transcriptome of cerebral organoids with and without methanol fixation
ERP123571We used bioinformatics tools to mine the T. harzianum genome for potential genomics, transcriptomics, and exoproteomics data and coexpression networks.
ERP123572Proxy upload by EnteroBase (from database Salmonella)
ERP123573Tomato spotted wilt virus
ERP123575Bovine IAARD
ERP123580Whole genome sequencing of samples suspected to be Mycobacterium chimaera from clinical samples and from water samples originating from Heating-Cooling Units in medical centers in Israel.
ERP123581In this study, we performed infection studies of murine precision cut lung slices (PCLS) with live or heat-killed P. aeruginosa, in order to investigate the role of viability for induction of an innate immune response.
ERP123587Divergence and Remarkable Diversity of the Y Chromosome in Guppies
ERP123588Reduced Representation Bisulfite Sequencing of hearts of Cobb Broiler chicks collected at 6hr post-hatch and incubated at different egg shell temperatures and CO2 concentrations.
ERP123589[Smart-seq2] scRNA-seq of mouse Plasmodium-specific CD4+ T cells
ERP123590Adaptation of Acidithiobacillus spp. co-culture to arsenopyrite
ERP123592Englacial water can slowly freeze in the englacial channels where the slow freezing excludes air bubbles giving the ice a clear aspect. This ice is then uplifted to the surface ablation zone of the glacier by glacial ice movements and can therefore be seen on the glacier surface in the form of clear ice bands. We employed an indirect method to sample englacial water by coring these ice bands. We studied 62 ice samples collected from clear-ice bands (i.e. frozen englacial water) and cloudy ice (i.e. meteoric deposition) in the Storglaciären (Sweden). We characterized microbial communities found inside the different ice types through the sequencing of the 16S rRNA hypervariable V3-V4 region of Bacteria and Archaea, sequenced using Illumina MiSeq platform (2x300 bp) with Pro341F and Pro805R primers.
ERP123597Later Stone Age human hair from Vaalkrans Shelter, Cape Floristic Region of South Africa, reveals genetic affinity to Khoe groups
ERP123599Extended-spectrum beta-lactamase Enterobacteriaceae (ESBL-E): a community-based cross-sectional study, the Netherlands, 2014 to 2016
ERP123600Transient in vivo base editing with no detectable DNA off-target mutations
ERP123601Draft genome sequences of manganese-oxidizing bacteria
ERP123602Comparative analysis of clonal evolution among patients with right-sided colon cancer, left-sided colon cancer and rectal cancer
ERP123604African swine fever virus (ASFV) strain Arm/07/CBM clones 1 and 3
ERP123605Assembly of an African swine fever virus (ASFV) strain Arm/07/CBM/c4
ERP123606Diversification and selection pattern of CYP6B genes in Japanese Papilio butterflies and their association with host plant spectra
ERP123608Study of Anaerobic Digester granules communities.
ERP123611Genome wide association studies in multiple spinach breeding populations refine downy mildew race 13 resistance genes
ERP123615Sequence, assembly and annotation of Bayer Crop Science’s maize inbred line LH244
ERP123616We employed a deep 16S amplicon sequencing approach to evaluate the diversity of six sediments deep-sea in the Colombian Southern Caribbean
ERP123617AOA in low pH soils
ERP123618Bursaphelenchus xylophilus complete genome
ERP123619Bursaphelenchus okinawaensis genome sequencing
ERP123620x
ERP123621Here, we seek to address if an asthmatic host environment is associated with an increased emergence of influenza virus variants.
ERP123622vibrio parahaemolyticus RNA-seq
ERP123623Here, we seek to address if an asthmatic host environment is associated with an increased emergence of influenza virus variants.
ERP123627Transcriptome analysis of Beijerinckiaceae bacterium RH AL1 grown with pyruvate as the carbon source in response to lanthanum supplementation
ERP123628Identification of Disease- and Headache-Specific Mediators and Pathways in Migraine Using Blood Transcriptomics
ERP123630Carbapenemase IncF-borne blaNDM-5 gene in the E. coli ST167 high-risk clone from canine clinical infection, Italy
ERP123631In vivo CRISPR/Cas9 screen to identify candidate therapeutic gene targets to enhance docetaxel efficacy in prostate cancer
ERP123632RNA-seq analysis of TCEAL1 knock down with/without docetaxel treatment to enhance docetaxel efficacy in prostate cancer
ERP123633RNA-seq of human patient-derived xenograft pancreatic cancer PancA6L cells cultured for 14 days with Galactose versus PancA6L cells cultured for 14 days with Glucose
ERP123634Snake Species Identification by PCR Amplification and Sequence Analysis of Mitochondrial DNA from Bite-Site Swabs
ERP123635Whole-genome sequencing of Pseudomonas sp. FEN, a siderophore-producing pseudomonad
ERP123636Mutation mapping and identification for NMD mutants from EMS screen by whole genomic DNA sequencing
ERP123638HSV-2 strain MS genome sequencing using both Illumina and PacBio technologies
ERP123639Inherited diseases in cattle
ERP123649Baterial motility
ERP123650Salmonella Newport outbreak in France August 2020
ERP123651Salmonella 1,4,[5],12:i:- (monophasic) outbreak in France August 2020
ERP123652Diet composition of krill and salps in the Southern Ocean
ERP123654miRNA synergism, combination of pro-neurogenic miRNAs as a more effective strategy to target neural derived tumors
ERP123655GENOMIC STEPPE ANCESTRY IN SKELETONS FROM THE NEOLITHIC SINGLE GRAVE CULTURE IN DENMARK
ERP123658The uropygial gland microbiome of house sparrows with malaria infection
ERP123659Discovering inhibitor tolerant cellobiohydrolases and lytic polysaccharide mono-oxidases from endophytic fungi
ERP123660Microbiomes of a specialist caterpillar are consistent across different habitats but also resemble the local soil microbial communities
ERP123661Comparative analysis of genetic determinants encoding cadmium, arsenic and benzalkonium chloride resistance in Listeria monocytogenes of human, food and environmental origin
ERP123675Complete genome sequences of 12 quinolone-resistant Escherichia coli containing qnrS1 based on hybrid assemblies
ERP123677Mutation rates in C. riparius after exposure to cadmium
ERP123686scRNA-seq of human fetal lung and intestine tissue
ERP123687RNA-seq reads from developing wings of the field cricket Teleogryllus oceanicus
ERP12368810x single cell gene expression and V(D)J immune profiling of T cells from the blood, synovial fluid and synovial tissue in psoriatic arthritis patients
ERP123691Broiler Marker Assisted Selection project
ERP12369216S amplicon sequencing of microbiome samples from Nile tilapia.
ERP123696NGS data of Shigella surveillance in Belgium
ERP123700Development of a phenotyping platform for the characterization of zebrafish autism models.
ERP123701Molecular characterization on Ongole Crossbreeds of Cattle in Indonesia
ERP123702Illumina and Nanopore whole-genome sequencing data from ESBL-positive Escherichia coli collected in the COMBAT study
ERP123703intestinal microbiota
ERP123705Case report of a human pneumonia due to Legionella sainthelensi
ERP123709Three phases of ancient migration shaped the ancestry of human populations in Vanuatu
ERP123714Risk Factors for Gut Microbial Dysbiosis in Hospitalized Children
ERP123717Physical activity shapes the intestinal microbiome and immunity of healthy mice but has no protective effects against colitis in Muc2-/- mice
ERP123720Habitat conditions reflect compositional differences in microbiome among Caribbean sea urchins
ERP12372216S rRNA gene sequence of Starkeya veronica
ERP123723Escherichia coli causing recurrent urinary tract infections: Comparison to non-recurrent isolates and genomic adaptation in recurrent infections
ERP123724Resource diversity and nutritional quality in solitary bees
ERP123725Use of (e)DNA and barcoding techniques for screening of (potentially) invasive alien species.
ERP123726Genomes of Listeria monocytogenes eslB deletion and complementation strains were sequenced to identify potential alterations as compared to the L. monocytogenes wildtype strain 10403S.
ERP123727Amaizing Dent Genotyping
ERP123728Chromosome-level assembly of A. thaliana accession Cdm-0 (AT9943) using PacBio sequencing
ERP123730Glycans as immune-checkpoints in cancer: removal of branched N-glycans prevents colorectal cancer progression through increasing immune recognition and anti-tumor immune response
ERP123731Chicken splenic conventional dendritic cell and macrophage subsets can be identified by differential expression of CSF1R and CD11d using the CSF1R-reporter transgenic chickens
ERP123733E.coli
ERP123734A potential role for stress-induced microbial alterations in IgA-associated irritable bowel syndrome with diarrhea
ERP123735Klebsiella phage vB_KvM-Eowyn
ERP123736Klebsiella phage vB_KppS-Raw
ERP123739Ultra-deep search for novel viruses
ERP123740Telomere-to-telomere assembly of the genome of an individual Oikopleura dioica from Okinawa using Nanopore-based sequencing
ERP123741Heliconius numata individual whole genome shotgun sequencing dataset
ERP123742Molecular epidemiology of SARS-CoV-2 in Hungary
ERP123743Early diagnosis of brain abscess using real-time electron microscopy and metagenomics.
ERP123747RNA seq in U-937 cells wildtype clones and rs2431697 region deletion clones
ERP123749RNA-seq of small intestinal macrophages, neutrophils, CD103-CD11b+cDC and cryptopatch and ILF associated mononuclear phagocytes (CIA-MPh)
ERP123750Vancomycin resistant Enterococci among COVID-19 patients
ERP123751MinION long read sequencing of selected clones from the bMQ BAC library
ERP123752Klebsiella phage vB_KppS-Eggy
ERP123753Klebsiella phage vB_KppS-Pokey, whole genome
ERP123754Klebsiella phage vB_KppS-Ant, whole genome
ERP123755Whole genome sequencing of K. pneumoniae isolated from the marine environment
ERP123756ChIP-seq to investigate the role of FliA-transcribed protein coding genes in Salmonella Typhimurium
ERP123758RNA-seq to investigate the role of FliA-transcribed protein coding genes in Salmonella Typhimurium
ERP123761RNA-seq in MCF-7 cells which had been exposed to arsenic
ERP123762The complete genome sequence of the hyperthermophillic archaeon Thermococcus sp. IRI35c.
ERP123771Klebsiella phage vB_KaS-Gatomon, whole genome
ERP123772Klebsiella phage vB_KaS-Ahsoka, whole genome
ERP123773Klebsiella phage vB_KppS-Samwise, whole genome
ERP123774Klebsiella phage vB_KpP-Yoda, whole genome
ERP123775Klebsiella phage vB_KpP-Goliath, whole genome
ERP123776Klebsiella phage vB_KpP-Screen, whole genome
ERP123777Klebsiella phage vB_KaS-Veronica, whole genome
ERP123778Klebsiella phage vB_KppS-Totoro, whole genome
ERP123779Klebsiella phage vB_KppS-Ponyo, whole genome
ERP123780Klebsiella phage vB_KppS-Jiji, whole genome
ERP123781Klebsiella phage vB_KppS-Storm, whole genome
ERP123782Klebsiella phage vB_KppS-Anoxic, whole genome
ERP123783Klebsiella phage vB_KqM-LilBean, whole genome
ERP123784Klebsiella phage vB_KqM-Bilbo, whole genome
ERP123785Klebsiella phage vB_KqM-Westerburg, whole genome
ERP123786Klebsiella phage vB_KoM-Liquor, whole genome
ERP123787Klebsiella phage vB_KpM-Milk, whole genome
ERP123788Klebsiella phage vB_KoM-Pickle, whole genome
ERP123789Klebsiella phage vB_KpM-Mild, whole genome
ERP123790Klebsiella phage vB_KpM-KalD, whole genome
ERP123791Klebsiella phage vB_KoM-MeTiny, whole genome
ERP123792Klebsiella phage vB_KpM-SoFaint, whole genome
ERP123793Klebsiella phage vB_KoM-Flushed, whole genome
ERP123794Klebsiella phage vB_KpM-Wobble, whole genome
ERP123797ATAC-seq in human CD4+T cells, CD8+T cells, CD19+B cells and CD14+ monocytes
ERP123798Whole genome sequencing of teak (Tectona grandis L. f.) in Thailand
ERP123799This study presents, for the first time, the impact of acrolein, a highly reactive and toxic compound, whose formation is likely a common feature of human gut microbiota, on model intestinal microbial communities.
ERP123800Latvian SARS-CoV-2 isolate genetic diveristy
ERP123801IN VITRO EVOLUTION OF BACTERIAL POPULATIONS WITH SINGLE CELL SEQUENCING
ERP123802Leaf microbiota and drought stress in forest trees
ERP123803Whole genome sequencing of Bacillus sp. EAR8
ERP123805Trajectory_and_Uniqueness_of_Mutational_Signatures_in_Yeast_Mutators
ERP123807Enterobacter colonization and infection in a single NICU center: retrospective investigation of implemented preventive measures after an outbreak
ERP123810Replication of plasmids without Ori into Thermococcus barophilus suggest utilization of recombination-dependent replication
ERP123812RNA-seq analysis of primary, processed and total RNAs of an E. coli wt and a mutant inactivated for RNase III
ERP123813Alterations in gut microbiome in cirrhosis as assessed by quantitative metagenomics. Relationship with acute-on-chronic liver failure and mortality and prognosis.
ERP123814farakka1
ERP123815RNA-Seq of influenza A/Puerto Rico/8/1934 (H1N1) virus infected MRC5, WI-38 VA-13, A549 and HEK293FT human cells
ERP123816The effect of an early-life probiotic supply on piglets fecal microbiota and growth performance until weaning
ERP123822Host range of SXT/R391 elements determined by EpicPCR in Meurthe River water sampled in Malzeville City (FRANCE).
ERP123823Investigation of the diversity of Listeria monocytogeneses CC121 related to the finding of a ST strain in a dolphin brain
ERP123826A modular system regulates specialized metabolite pathway branch choice in the medicinal plant Catharanthus roseus.
ERP123827A modular system regulates specialized metabolite pathway branch choice in the medicinal plant Catharanthus roseus
ERP123828Temporal response of soil bacterial communities to application of organic and inorganic phosphate based fertilisers under of Vicia faba L cultivation
ERP123829A modular system regulates specialized metabolite pathway branch choice in the medicinal plant Catharanthus roseus
ERP123830Single-cell mRNA-seq from a healthy skeletal muscle cell derived from human induced pluripotent stem cell
ERP123831Genomic characterisation of Escherichia coli isolates from drinking water systems in rural Kenya
ERP123832QUANTSEQ 3' sequencing of protrusions and cell bodies of control (NT) or LARP6 siRNA (LARP6 KD) transfected MDA-MB231 breast cancer cells
ERP123833RNA-seq of murine Th1 and Th2 cells differentiated for 24hr with or without the presence of actin and EZH2 inhibitors
ERP123834Chip-seq of EZH2 and VAV1 in 24hr differentiated Th1 and Th2 cells with or without EZH2 or Actin polymerization inhibitors
ERP123836Data from Jose Cerca's PhD at the University of Oslo
ERP123837Using_scRNA_seq_to_examine_transcriptional_variation_in_the_malaria_parasite_ookinete_stage
ERP123838The Vaginal Microbiota and Innate Immunity After Local Excisional Treatment for Cervical Intraepithelial Neoplasia
ERP123839Whole genome sequencing from Ovarian Cancer Cell lines
ERP123842Single cell RNA sequencing of small intestinal dendritic cells from C57BL/6, RORgt-/- and RORgt-Cre x Ltb-flox mice
ERP123846Variation of temperature and carbon sources to isolate thermophilic, thermotolerant and heat-resistant fungi from compost and soil
ERP123855Prediction of Antimicrobial Resistance in clinical Campylobacter jejuni Isolates from Whole-Genome Sequencing Data
ERP123856Metagenomic analysis of respiratory samples from a COVID-19 ICU patient
ERP123858Gut microbiome variation modulates the effects of dietary fiber on host metabolism
ERP123859STOTEN 2
ERP123860Transposon-insertion sequencing in a clinical isolate of Legionella pneumophila to identify essential genes and determinants of natural transformation
ERP123862serial dilutions of mock community to assess contaminant and spurious assignment of taxa
ERP123863Adaptive mutations associated with oxacillin treatment failure in Staphylococcus aureus infections
ERP123864evolution of key genes related to flavonoids in Apiaceae
ERP123866Taxonomic study of Gulosibacter sp. 401352-2018
ERP123867SNPs of Bone morphogenetic protein 2 (BMP2) in the razor clam Sinonovacula constricta
ERP123869Describing variability in the tyrosinase (TYR) gene, the albino coat colour locus, in domestic and wild European rabbits
ERP123873Prova_fasta
ERP123874Genomic insights into adaptations of TMA-utilizing methanogens to diverse habitats including the human gut
ERP123875CRISPR-Cas9 mediated editing of the CD46 gene in primary human B cells prior to their infection with Epstein-Barr virus (EBV) – analysis of CD46 transcripts after 24 hours
ERP123877HYDROGEN AS A CO-ELECTRON DONOR FOR CHAIN ELONGATION WITH COMPLEX COMMUNITIES
ERP123878The human gastrointestinal tract through space and time- Fetal VDJ
ERP123879Exome sequencing of lymphoma tumors developed in PPM1D transgenic mouse model after irradiation
ERP123881Microbial community traits of the amphibian skin microbiota as predictors of fungal disease risk
ERP123882Paramecium tetraurelia PacBio RSII sequencing T50 stage
ERP123883The human gastrointestinal tract through space and time- Fetal GEX
ERP123884Metagenome-assembled genomes (MAGs) from the yak faecal microbiota
ERP123886Nanopore sequence data for 12 quinolone-resistant Escherichia coli containing qnrS1
ERP123891The human gastrointestinal tract through space and time- Adult GEX
ERP123894RNAseq comparison of the J and N (Taconic) substrains of C57BL/6 reveals substantial differences in endogenous Murine Leukemia Virus expression
ERP123896Interinstitutional effort to sequence SARS-CoV-2 circulating genomes in Ireland during the Covid-19 global pandemic.
ERP123897Carnobacterium maltaromaticum assembles
ERP123898The human gastrointestinal tract through space and time- Adult VDJ
ERP123904RNA-seq of U937 cells treated with AICAr
ERP123906Methylation profiling of C.elegans to identify CEH-60/PBX binding sites
ERP123908Transcriptome and translatome of cardiomyocytes exposed to hypoxia in vivo and in vitro
ERP123910Bacterial communities associated with three terrestrial orchid species as revealed by 16S rRNA gene metabarcoding
ERP123911Molecular identification of Sarcocystis wobeseri in the white-tailed sea eagle (Haliaeetus albicilla)
ERP123912Expression Analysis of Prrx1-profienct and Prrx1-deficient pancreatic fibroblasts cultured in 2D and 3D
ERP123913Multidimensional chromatin profiling of zebrafish and human pancreas to uncover and validate disease-related enhancers
ERP123914Culturing 2.7 million-year-old bacteria carrying resistance genes and comparative genomics with modern isolates.
ERP123915Arctic seasonal ice zone ecology
ERP123918Sediment metatranscriptomes
ERP123921RNAseq-based Transcriptional Profiling of Adult Male Rat Liver and/or Kidney following 90 Day Dietary Exposure to Fenpicoxamid, Pronamide, Sulfoxaflor, or Triclopyr Acid
ERP123922Quantification of the adaptive power of integron shuffling through experimental evolution in P.aeruginosa PAO1
ERP123923Transcriptome Sequencing of H. volcanii with CRISPRi knockout of endA and wt.
ERP123924Mutational analysis of a myelodysplasia cutis case
ERP123927Evolution of the bacterium Serratia marcescens under several experimental temperature treatments (fluctuating and constant temperatures)
ERP123928RNA-Seq of anagen pilosebaceous units (PUs) isolated from occipital and vertex scalp regions of 10 Hamilton grade IV male androgenetic alopecia (AGA) volunteers
ERP123929RNAseq of murine CT26 cell line -WT and gal-9-KO - in vitro
ERP123930RNAseq of murine MB49 cell line - WT and gal-9-KO - in vitro
ERP123931A pilot study to estimate the carrier frequency of common genetic disorders in North India
ERP123932An irritable bowel syndrome subtype defined by species-specific alterations in faecal microbiota.
ERP123934Successive plant growth amplifies genotype-specific assembly of the tomato rhizosphere microbiome
ERP123935Single-cell RNAseq of phenotypically defined human B cell subsets
ERP123936Mouth and gut microbiome of Nile tilapia
ERP123937Fractionation of different lignocelullose by Streptomyces coelicolor A3(2) and production of secondary metabolites
ERP123939Whole genome sequencing of Colossoma macropomum (Characiformes: Characidae): an important Amazon finfish for aquaculture in South America.
ERP123941Soil microbial community’s diversity rehabilitation in Colombian Coal Mine Spoil Dump: a metagenomic survey unravels its metabolic potential
ERP123942Evolution of Staphylococcus aureus ST45
ERP123945WAS enhance organohalides respiration
ERP123947Lawsonella clevelandensis Case Report
ERP123951Impact of yeast-derived ß-glucans on the porcine gut microbiota and immune system in early life
ERP123955Bioaugmentation of Paenarthrobacter enhanced the degradation efficiency of atrazine residue in soil
ERP123956turf algal associated bacterial communities
ERP123958Reference-free reconstruction and quantification of transcriptomes from Nanopore long-read sequencing (signal files)
ERP123960Ancient DNA reveals monozygotic newborn twins from the Upper Palaeolithic
ERP123961Gulosibacter hominis sp. nov: a novel species from human clinical samples
ERP123962Effect of temperature on acetate mineralization kinetics and microbial community composition in a hydrocarbon-affected microbial community during a shift from microoxic to sulfidogenic conditions
ERP123963RNA sequencing of native and ex vivo cultured murine tail tendon fascicles
ERP123964Example raw data to cover the strain diversity of M. bovis commonly isolated in the UK
ERP123967mRNA transcriptional profiles in Streptococcus thermophilus wild-type strain LMD-9 and 3 mutants deleted for the pptAB, eep and amiCDE genes.
ERP123970Whole genome sequencing of natural populations of the grass Brachypodium distachyon, collected in Italy and France
ERP123972To delineate mutational landscape of patients with myelofibrosis
ERP123974RNA-seq of variable heavy and light IgG fragments of CD19(+)CD24(high)CD38(high) subpopulation isolated from peripheral blood of patients with multiple sclerosis and healthy donors.
ERP123975The specific microbial biodiversity linked to a certain vineyard location has been reported to be a crucial aspect in the concept of wine-terroir together with edaphic, climatic and human factors. These biogeographical patterns referred as the microbial-terroir. In this work, we applied an HTS amplicon library approach to conduct a global survey of the soil microbial communities of vineyards. We analyzed 200 soil vineyards worldwide, in four continents trying to settle the basis for the development of a vineyard-soil-microbiome map to represent the microbial-wine-terroir on a global scale. We highlighted that this link exists at different scales; among continents, states, and between different wine-regions within the same country. Geography has a strong effect on microbial communities composition at a global scale, which is also maintained at a country scale. Also, for the very first time, we describe the microbial community of a new and northern winemaker regions such as Denmark, that can be of great interest for viticulture adaptation in a context of climate change. Finally, we developed a predictive model, based on random forest analyses, to discriminate between microbial patterns to identify the geographical source of the samples with reasonable precision.
ERP123976Variants of INDEL in gastric cancer
ERP123977Molecular repertoire of Deinococcus radiodurans after 1 year of exposure outside the International Space Station within the Tanpopo mission
ERP123979Whole mitochondrial DNA sequencing from 92 matched-paired peripheral blood and breast tumors.
ERP123984Dysbiotic Lesional Microbiome with Filaggrin Missense Variants Associate with Atopic Dermatitis in India
ERP123985Complete genome of Enterobacter cancerogenus sp. UPC1, isolated from a crude-oil-degrading consortium
ERP123986Complete genome of Citrobacter freundii sp. PSV, isolated from a crude-oil-degrading consortium
ERP123987Complete genome of Serratia sp. Tan611, isolated from a crude-oil-degrading consortium
ERP123989Complete genome of Agreia sp. COWG isolated from an acid mine drainage
ERP123990Phylogenetic signatures of ecological divergence and leapfrog adaptive radiation in Espeletia
ERP123993DISCOVERY OF NOVEL TARGETS IN A CRPS MOUSE MODEL BY TRANSCRIPTOMICS: TNF AND JAK-STAT PATHWAYS
ERP123996Genetic diversity analysis of lettuce using genotyping-by-sequencing
ERP123997Molecular Diagnostics of Genetic Myopathy in Indian Subcontinent using Exome sequencing
ERP123999Rapid identification of Vibrio species belonging to the Harveyi clade by MALDI-TOF MS profiling using main spectral profile database implemented with an in-house database: Luvibase
ERP124000Phylogenomics and species delimitation for effective conservation of manta and devil rays
ERP124001Genome-wide sequencing of 20 Leishmania gene mutants as part of a wider study to define protein kinases with life cycle transition roles
ERP124003Rapid and reproducible Differentiation of hematopoietic and T cell progenitors from pluripotent stem cells
ERP124004Sequencing of haematopoietic stem and progenitor cell clones from Aldh2-/- Adh5-/- mice
ERP124005Dissecting the protein and transcriptional responses of human immune cells to T cell and monocyte specific activation
ERP124007Identification of viruses infecting plants and fungi
ERP124009Psychrophilic species of the genus Psychrobacter are likely descendants of pathobionts
ERP124011Post-medieval Latvian oral microbiome in the context of modern dental calculus and modern dental plaque microbial profiles.
ERP124014Streptomyces sp. KY70 and KY75 strains have been isolated from soil of the Kherzet Youcef Pb/Zn former mine, in Ain Azel (Sétif), Algeria.
ERP124016Investigation of a superspreading event preceding a large meat processing plant-related SARS-Coronavirus 2 outbreak in Germany
ERP124017Whole-genome sequencing investigation of a large nosocomial outbreak caused by ST131 H30Rx KPC-producing Escherichia coli in Italy
ERP124018New species of coelomycetous
ERP124019The spread of the plasmid RP4 in a microbial community is dependent on the particular donor strain
ERP1240254C-Seq identify the interaction between miR-146a promoter and rs2431697-containing region
ERP124027SARS-CoV-2 spike cleavage and transmission
ERP124030Single cell sequencing analysis of senescence in Mus musculus prostate cancer models
ERP124034Test of anti-tumour polymer in mice
ERP124037Single Molecule Real-Time DNA sequencing of HLA genes
ERP124038Introgression in the Daphnia longispina species complex
ERP124040Evolution_and_lineage_dynamics_of_a_transmissible_cancer_in_Tasmanian_devils
ERP124042TGS full length class II
ERP124043Long-reads assembly and annotation of the Brassica napus reference genome, Darmor-bzh
ERP124044Long-read-sequenced reference genomes of the seven major lineages of enterotoxigenic Escherichia coli (ETEC) circulating in modern time
ERP124049Trypanosoma brucei VSG Switching - CRISPR/Cas9
ERP124060A novel KEL*02.03 with c.1414-1G>T SNV found in the Polish family leading to Ko_null phenotype
ERP124063European seabass and gilthead seabream population pools used for SNP discovery for the development of the 60K combined-species MedFish SNP array
ERP124065Gestational diabetes influences offspring's gut microbiota
ERP124066Amsterdam canal sediment, water, and biofilm 16S rRNA gene amplicon sequencing
ERP124069Staygreen trait mapping
ERP124071Ecology of Carnobacterium maltaromaticum
ERP124073Oryza sativa LIGULELESS 2s determine lamina joint positioning and differentiation by inhibiting auxin signaling
ERP124074Transfer of environmental microbes to the skin and respiratory tract of humans after urban green space exposure
ERP124075Fiber derived microbial metabolites protect against maladaptive repair in AKI through G-protein coupled receptors and HDAC inhibition
ERP124076Hereby, we report a confirmed case of intrauterine SARS-CoV-2 transmission with rapid placental dysfunction and fetal distress.
ERP124077Soil bacterial community in potato tuberosphere following repeated applications of a common scab suppressive antagonist
ERP124081The Vaginal Microbiota and Innate Immunity After Local Excisional Treatment for Cervical Intraepithelial Neoplasia
ERP124082URT1-mediated uridylation shapes poly(A) tails in Arabidopsis
ERP124084Bovine-TB WGS Validation
ERP124087A two-day 12h-day/12h-night transcriptome for the benthic diatom Seminavis robusta
ERP124088Deep sequencing and phylogenetic analysis of SARScov2 strains circulating in North Italy from February to April 2020
ERP124091Terrestrial Inputs Shape Coastal Microbial Communities in a High Arctic Fjord (Isfjorden, Svalbard)
ERP124092Oryza sativa LIGULELESS 2s determine lamina joint positioning and differentiation by inhibiting auxin signaling
ERP124093Dissecting the protein and transcriptional responses of human immune cells to T cell and monocyte specific activation
ERP124104Genomics of museum samples reveal the evidence for recent effective population size increase in monarch butterflies.
ERP124109VESTIGIAL-LIKE 1 IS A SHARED TARGETABLE CANCER-PLACENTA ANTIGEN EXPRESSED BY PANCREATIC AND BASAL-LIKE BREAST CANCERS
ERP124110Chromosome-scale assembly and analysis of biomass crop Miscanthus lutarioriparius genome
ERP124112Investigating major recurring Campylobacter jejuni lineages in Luxembourg
ERP124114Invasion of the beauty rat snake, Elaphe taeniura Cope, 1861 in Belgium
ERP124115Study of bacterial communities along a permafrost core in a rock glacier of the Ortler-Ortles Alps
ERP124116Multi-species RELA ChIP-seq of mammalian aortic endothelial cells before and after TNFa stimulation
ERP124117ChIP-seq of histone marks (H3K27me1, H3K27me3, H3K9me2) and of the H2A.W histone variant in Arabidopsis pol2a mutants.
ERP124118Microbiome analysis to develop Gardnerella vaginalis abundance threshold to profile and detect potential STI pathogens
ERP124121Study of fungal communities along a permafrost core in a rock glacier of the Ortler-Ortles Alps
ERP124123The pangenome analysis of the soil-borne fungal phytopathogen Rhizoctonia solani and development of a comprehensive web resource: RsolaniDB
ERP124124RNA-seq of MG1655 wt and MG1655 delta-phoB strains grown in MOPS media with low phosphate (0.2 mM)
ERP124125Ezh2 chip-seq of Th1 and Th2 cells during the first 48 hours of cell differentiation.
ERP124126Food waste acidogenic fermentation reactor microbiota
ERP124128Comparative analysis of RNA-seq data from human ALT+ cell lines treated with NR2F2 siRNA
ERP124130Genome sequencing of a clinical isolate of Mycobacterium microti
ERP124131RNA-seq of human neuroblastoma cell lines treated with ALKAL2 and/or lorlatinib
ERP124132Donor-derived vancomycin-resistant enterococci transmission and bloodstream infection after intestinal transplantation
ERP124133we have performed a transcriptomic analysis to compare the differentially expressed genes between oxytetracycline (OXY) susceptible and resistant strains of A. hydrophila.
ERP124136A_single_cell_atlas_of_the_Plasmodium_falciparum_journey_through_the_mosquito
ERP124142Relative gene expression of two transgenic moss (P.pantens) lines.
ERP124143TCR repertoire profiling of T cells expressing NK-cell markers
ERP124146Genome sequencing and comparison of representatives of Pseudomonas aeruginosa clone ST235 strains
ERP124147Dynamics of Extended-spectrum cephalosporin-resistant E. coli in pig farms: a longitudinal study
ERP124148Genome comparison of Pseudomonas aerugnosa clone ST253 (clone PA14) strain
ERP124150Ingestion of probiotic (Lactobacillus helveticus and Bifidobacterium longum) alters intestinal microbial structure and behavioral expression following social defeat stress.
ERP124151Genome sequencing of Mycobacterium microti strains
ERP124152Determination of Genomic Markers to Conduct Parentage, Differentiate Wood and Plains Bison Sub-species, and Measure Cattle Introgression in Canadian Bison
ERP124157Bacterial and micro-eukaryotic communities of Arctic thermokarst ponds (Siberia)
ERP124158Microbiome in acute exacerbation and stable phase of COPD: a descriptive and comparative study of 16s rRNA sequencing and metagenomic sequencing
ERP124167Genome sequencing of SARS-CoV-2 isolated
ERP124171RNA-seq of FFPE-macrodissected HGSOC tissues and solid and ascites-derived HGSOC 2D cultures
ERP124177Adenine auxotrophic strains are widely used, but their response to purine starvation is not studied in detail. We report effects harnessed by purine or nitrogen starvation in purine synthesis ade8 knockout in CEN.PK2-1D strain.
ERP124181ChIP-seq in sheep alveolar macrophages
ERP124182monophasic salmonella virchow
ERP124186The chloroplast genome were assembled and annotated for solanum pimpinellifolium
ERP124187A standardized reference scheme for cgMLST on P. larvae.
ERP124188Differences in the gut microbial composition of divergently selected laying hen lines does not affect feather pecking and agonistic behavior
ERP124189Genetic characterization of the first African swine fever virus isolate from Germany, 2020
ERP124190Increased copy number couples the evolution of plasmid horizontal transmission and antibiotic resistance.
ERP124192Acidithrix sp. C25 was a representative iron snow strain and studies of chemical communication and interspecies aggregation mechanism between Acidithrix sp. C25 and Acidiphilium sp. C61 were conducted. Here we sequenced the whole genome of Acidithrix sp. C25 to broaden our knowledge of its metabolic activities in iron snow microbiome.
ERP124194Fungal planet description sheets - Dec 2020
ERP124195Lifestyles of lake Erken model communities
ERP124198Transcription Termination and Antitermination of Bacterial CRISPR Arrays
ERP124199Acidocella sp. C78 was a representative iron snow strain. Here we sequenced the whole genome of Acidocella sp. C78 to reveal its metabolic activities in iron snow microbiome.
ERP124200This study contains the Illumina paired-end sequencing data of a polled Fleckvieh bull.
ERP124201Bacterial community dynamics varies with soil management and irrigation practices in grapevines (Vitis vinifera L.)
ERP124203Re-sequencing of Klebsiella pneumoniae RH201207
ERP124204We describe a Lactobacillus paracasei IBR07 (Lacticaseibacillus paracasei) isolated from autochthonous microbiota present in a regional feed product. This strain can resist and persist at low pH and is considered safe for animal feed. The identification of species that can improve the final quality (sensorial and nutritional) of fermented feed constitutes a biotechnological challenge to increase animal production.
ERP124207Ultraviolet radiation drives DNA damage in a subset of mucosal melanomas
ERP124211Brevibacterium phoceense
ERP124212Study of gut microbiota in Schistosoma mansoni-infected WT and HMA mice
ERP124213Environmental regulation of PndbA, an auto-inducible promoter for two-stage industrial biotechnology in cyanobacteria
ERP124215Transposable element expression at unique loci in single cells with CELLO-seq
ERP124217KTRG--B49 samples were collected fromm plants under cold for 4 Clesius 1h,3h,6h,and -2 Clesius 2h ,-4 Clesius 1h,recovery 1day.
ERP124221Dual RNAseq analyses at soma and germline levels reveal evolutionary innovations in the elephantiasis-agent Brugia malayi, and adaptation of its Wolbachia endosymbionts
ERP124222Human stool preservation impacts taxonomic profiles in 16S metagenomics studies.
ERP124224Harmonization of whole genome sequencing for outbreak surveillance of Enterobacteriaceae and Enterococci.
ERP124225Nitrate-enrichment structures phytoplankton communities in the shallow eastern Mediterranean coastal waters
ERP124227PRESENCE, PROLIFERATION AND DISTRIBUTION OF BACTERIAL METALDEHYDE-DEGRADING GENES IN SOILS FROM NORTHERN ENGLAND
ERP124228Genetic map construction of a diploid blueberry mapping population
ERP124229Genome 3D structure in pig fetal muscle from Hi-C assays of Chromatin Conformation Capture
ERP124232Evolution_and_lineage_dynamics_of_a_transmissible_cancer_in_Tasmanian_devils___Targeted
ERP124233Hordeum vulgare subsp. vulgare cultivar 'Morex' assembly (CSS reads with Falcon)
ERP124234Hordeum vulgare subsp. vulgare cultivar 'Morex' assembly (CSS reads with Hi-Canu)
ERP124235Hordeum vulgare subsp. vulgare cultivar 'Morex' assembly (CLR reads with wtdbg2)
ERP124236Hordeum vulgare subsp. vulgare cultivar 'Morex' assembly (CLR reads with MECAT)
ERP124237Hordeum vulgare subsp. vulgare cultivar 'Morex' assembly (ONT reads with Smart denovo)
ERP124238Hordeum vulgare subsp. vulgare cultivar 'Morex' assembly (Hybrid assembly with Wengan)
ERP124239Hordeum vulgare subsp. vulgare cultivar 'Morex' assembly (Short read assembly with TRITEX)
ERP124240PacBio CCS reads for the barley cv. 'Morex' V3 assembly.
ERP124241Oxford Nanopore reads raw data for the barley cv. 'Morex' V3 assembly.
ERP124242Hordeum vulgare subsp. vulgare cultivar 'Morex' assembly (MorexV3)
ERP124243The intestinal virome in irritable bowel syndrome
ERP124246Provision of a Sorghum bicolor Multiparent Mapping Population Emphasizing Carbon-Partitioning Dynamics
ERP124248scospondin mutant embryos
ERP124249REMOVAL OF ENVIRONMENTALLY RELEVANT CONCENTRATIONS OF THE PESTICIDE METALDEHYDE FROM WATER IN BIOAUGMENTED PILOT-SCALE SLOW SAND FILTERS
ERP124252ChIP-seq of histone H3 and H3K9me2 in WT and dbl2 mutant fission yeast
ERP124253RNA-seq analysis of gene expression in macrophages progenitors from the yolk sac of murine embryos at embryonic days 9 and 10, and the modifications resulting from a defective expression of the transcription factor Lyl-1
ERP124254Gut microbiota profiles in diarrheic patients with co-occurrence of Clostridioides difficile and Blastocystis
ERP12425516s rRNA sequencing analyze the gut microbiota commposition in NAFLD model rats
ERP124259Whole genome sequencing to investigate a novel mandbulofacial deformity in Hereford cattle
ERP124261Yersinia ruckeri is the causative agent of enteric redmouth disease (ERM) which causes economically significant losses in farmed salmonids, especially Atlantic salmon (Salmo salar) and rainbow trout (Oncorhynchus mykiss, Walbaum). However, very little is known about the genetic relationships of isolates responsible for disease in these two host species or about factors responsible for disease. Phylogenetic analyses of 16 representative isolates based on the nucleotide sequences of 19 housekeeping genes suggests that Atlantic salmon and rainbow trout isolates represent distinct host-specific lineages. There is evidence of intragenic recombination present within these 19 genes suggestive of horizontal recombination between isolates. Comparative nucleotide sequence analysis of the key outer membrane protein genes ompA and ompF revealed that the corresponding gene trees were both non-congruent with respect to the housekeeping gene phylogenies suggesting that horizontal gene transfer has influenced the evolution of both these surface protein-encoding genes. Analysis of inferred amino acid sequence variation in OmpA identified a single variant, OmpA.1, in serotype O1 and O8 isolates (the typical pathogenic strains in rainbow trout and Atlantic salmon, respectively) that was different from that in isolates of other serotypes. In particular, the amino acid sequence of surface-exposed loop 3 was very different to that of other isolates. These findings suggest that positive selection has likely influenced the presence of OmpA.1 in these isolates and that loop 3 may have an important role in a function of OmpA related to virulence. Amino acid sequence variation of OmpF was greater than that of OmpA and was similarly restricted mainly to the surface-exposed loops. Two OmpF variants, OmpF.1 and OmpF.2, were associated with pathogenic rainbow trout and Atlantic salmon isolates, respectively. These OmpF proteins had very similar amino acid sequences suggesting that positive evolutionary pressure has also favoured the selection of these variants in pathogenic strains infecting both species.
ERP124263Identifying crossover locations in an Arabidopsis thaliana meiMIGS-PPX1-PPX2 Col x Ler F2 population using genotyping by sequencing
ERP124264RNA seq of prostate gland from WT, PTEN pc -/- and PTEN pc-/-;P53 -/- mice
ERP124265Identification of pro-fibrotic macrophages populations by scRNA-seq in West Highland white terriers affected with canine idiopathic pulmonary fibrosis
ERP124266Polysome profiling analysis of myeloid progenitors of control mice or mice conditionally deficient for Elp3 in the hematopoietic system
ERP124267Differential gene expression in WT mice and mice lacking PTPN2 in T cells
ERP124268Ancient DNA preserved in small bone fragments from the P.W. Lund Collection
ERP124272Two different approaches of microbial community structure characterization in riverine epilithic biofilms under multiple stressors conditions: developing molecular indicators.
ERP124276ChIP-seq of FOXK2 in human embryonic stem cells H1 ESC, and the differentiated mesendoderm cells and and NPC cells
ERP124281Endophytic fungal microbiome of wheat
ERP124282nuntu mtnjgyuy
ERP124283gut metagenome of HC, IBS, DEP and COMO
ERP124290RNA-seq of TH-MYCN driven neuroblastoma mice +/- ALK F1178S mutation and +/- ALKAL2 overexpression
ERP12429116S rRNA sequences associated with the moss Racomitrium lanuginosum
ERP124292LARP iCLIP in MDAMB231 cell lines
ERP124293METHYLGLYOXAL INDUCES SIGNALLING TO PROMOTE THE EARLY DEVELOPMENT OF MAIZE DURING LOW TEMPERATURE CONDITIONS
ERP124294Acute alcohol injury
ERP124296scRNA-seq of human fetal intestine tissue
ERP124297Fecal Microbiota Transplantation Controls Murine Chronic Intestinal Inflammation by Modulating Immune Cell Functions and Gut Microbiota Composition
ERP124300UploadKongBo
ERP124304Two new species of the Cocconeis placentula group from Korea
ERP124307The invasive parthenogenetic marbled crayfish Procambarus virginalis Lyko, 2017 gets foothold in Belgium.
ERP124308The aim of our study is therefore to evaluate the emergence of CC152 MRSA PVL+ clone in the community and to understand its evolution in France.
ERP124309Austrian raw-milk hard-cheese ripening involves successional dynamics of non-inoculated bacteria and fungi
ERP124310Effects of tributyrin on gut microbiota shifts related to performances of weaning piglets
ERP124316Integrated RNA and DNA sequencing of endocrine resistant breast cancer
ERP124317Viral metagenomics on fecal samples from Magellanic penguins
ERP124318Microbial composition of Kefir- UDI strain using shotgun and amplicons metagenomics
ERP124321In this study, we report the first case of recurrent PJL caused by the same L. monocytogenes strain three years and three months after the first infection. L. monocytogenes.
ERP124323Within the aim of advancing precision oncology, we have generated a collection of patient-derived xenografts (PDX) characterized at the molecular level, and a preclinical model of colon cancer metastasis to evaluate drug-response and tumor progression.
ERP124325Power of the crowd: substrate-dependent impact of black soldier fly larvae on bacterial community composition in substrate and larval gut
ERP124327WES and RNAseq of neuroblastoma cell lines.
ERP124328WES and mRNAseq of neuroblastoma cell lines.
ERP124329EMG produced TPA metagenomics assembly of PRJEB15404 data set (Plastic Metagenome Study).
ERP124332Metagenetic analysis of fungal communities of spoiled and control black olives fermentations and its potential fungal sources in raw materials and process environment.
ERP124333Metagenetic analysis of bacterial communities of spoiled and control black olives fermentations and its potential microbial sources in raw materials and process environment.
ERP124334DNA metabarcoding reveals broad presence of plant pathogenic oomycetes in soil from internationally traded plants
ERP124335Phytophthora ITS1 amplicon Illumina MiSeq sequencing in Andean Patagonia forest soils.
ERP124336Reconstruction of historic phylogeography of Ostrea edulis of the late 19th century.
ERP124337Moose genomics and demography
ERP124341Metagenomic raw data (reads in FASTQ format) from 24 environmental samples of sewage sludge and cattle slurry subjected to the methane fermentation process
ERP124342RNA-seq of human embryonic stem cells H1 ESC cells and the differentiated NPC cells with FOXK1/2 and SIN3A knock down and the control condition.
ERP124343Gene-based Association Analysis Suggests Association of HTR2A with Antidepressant Treatment-response in Depressed Patients
ERP124347Sequence data for A robust phylogenomic framework for the calamoid palms
ERP124348Assembly patterns of the rhizosphere microbiome along the longitudinal root axis of maize (Zea mays L.)
ERP124350Functional genomic screens in human cells to identify host factors for SARS-CoV-2 and common cold coronaviruses
ERP124352Influence of variability in obesity-linked CNS genes on the onset and evolution of eating disorders
ERP124353RNA-Seq of cultivated (i) bulk human thymic epithelial cells (hTECs) (ii) cortical hTECs (iii) medullary hTECs (iv) human thymic interstitial cells (hTICs)
ERP124356Genetic ancestry changes in Stone to Bronze Age transition in the East European plain
ERP124359Acanthopagrus latus (yellowfin sea bream)
ERP124360Acanthopagrus latus (yellowfin sea bream)
ERP124362Microbial communities associated with Arabidopsis roots and rhizoplane subjected to a severe drought event and impact of a consortium on alleviating that stress.
ERP124365Study of the impact of the Arabidopsis thaliana radA mutant on cpDNA
ERP124366Ancient DNA from Guam and the Peopling of the Pacific
ERP124367Human adenoviruses (HAdV) associated with pediatric patients in Bern, Switzerland
ERP12436916s metagenomes from San Francisco stream (Argentina)
ERP124370Whole-genome sequencing of SARS-CoV-2 from Covid-19 patients from Belgium
ERP124371Trimethoprim-resistant methicillin-resistant Staphylococcus aureus ST5
ERP124372RNA-seq of yeast cells with mutations of the Rpb4 E19-22 motif
ERP124374EMG produced TPA metagenomics assembly of PRJNA78025 data set (Human Oral Subgingival Plaque Microbiome).
ERP124379Microbial modulation via dietary supplementation of quebracho and chestnut tannins in weaning piglets.
ERP124380WGS of Pasteurellaceae isolated from calves in Denmark
ERP124383Molecular Profile of Colorectal Cancer in Nigeria
ERP124388Bacterial and Archaeal community from two contrasting fjords from Chilean Patagonia.
ERP124390Assembly and longitudinal analysis of childhood gut microbiomes from the TEDDY project
ERP124393Gut Microbiome Profiling of a Rural and Urban South African Cohort Reveals Biomarkers of a Population in Lifestyle Transition
ERP124396Whole-genome sequencing of Paraburkholderia type and reference strains
ERP124398Bioaccessibily and effect on intestinal microbiota of tyrosols from Olea europaea
ERP124399Tissue-dependent transcriptomic and bacterial associations in primary sclerosing cholangitis-associated IBD
ERP124400One Day in Denmark 2018 point prevalence survey on fungi
ERP124401Investigation of the PAR gene conservation in Taraxacum germplasms
ERP124403In vitro evolution of caspofungin resistance in Candida auris
ERP124404pancreatic cancer
ERP124406The complete mitochondrial genome of the lipid-producing yeast Rhodotorula toruloides
ERP124409RNA-seq for WT and WT+Nitrite/Nitrate vibrio parahaemolyticus.
ERP12441625 SARS-CoV-2 sequenced Romanian viral strains, from the first two months of the pandemic
ERP124418Rediscovery_and_Genomic_Epidemiology_of_Yaws_in_Liberia
ERP124419The microbial pathology of asthma
ERP124420Failures of nerve regeneration caused by aging or chronic denervation are rescued by restoring Schwann cell c-Jun
ERP124421heterorhabditis bacteriophora
ERP124423LINE-1 DNA methylation levels in DPPA3 KO overexpressing DPPA3 mutants
ERP124434The influence of alfalfa-switchgrass intercropping on microbial community structure and function
ERP124435The role of the periplasmic chaperones SurA, Skp and DegP for fitness, outer membrane integrity and virulence of Acinetobacter baumannii AB5075: same-same, but different?
ERP124437Shotgun metagenomics sequences of gut microbiome from obese rats treated with a panel of weight loss drugs
ERP124438Amplicon bisulfite sequencing of LINE-1 elements in TET catalytic mutants and DPPA3 KO ESCs rescued by doxycylin induced overexpression
ERP124440RNA-seq of prostate cancer Patient-Derived Xenografts derived from primary and metastatic tumors at different stages of progression
ERP124441RNA-Seq analysis of resting and activated mouse Tregs
ERP124442Deciphering the cross-talk between host and pathogen during intracellular persistence of Staphylococcus aureus within mast cells
ERP124443Ethylene perception modulates tomato pollen tube growth by altering calcium signaling and cell wall remodeling
ERP124444Genomic epidemiological study of risk factors associated with MDR-TB transmission in Cameroon
ERP124447Sodium butyrate supplementation and its influence in cecal microbial modulation
ERP124449Candidate genes for age at menarche are associated with uterine leiomyoma
ERP124450Targeted bisulfite sequencing of colon mucosa from healthy women
ERP124451Transcription profiling by RNA sequencing of MelanA- and caIKK-treated monocyte-derived dendritic cells
ERP124452Tissue-dependent transcriptional and bacterial associations in primary sclerosing cholangitis-associated inflammatory bowel disease
ERP124454Differential gene expression in two populations of the wood white butterfly (Leptidea sinapis) from Catalonia and Sweden reared on different host plants, Lotus dorycnium and Lotus corniculatus
ERP124455Assessment of Biolog EcoplateTM method for functional metabolic diversity of the pig fecal microbiota
ERP124459Combined CDK4/6 and MEK inhibition in refractory CDKN2A and NRAS mutant melanoma
ERP124461MtDNA sequences from Sala II and Sala I Neandertals (Slovakia)
ERP124462RNAseq characterisation of iPSC-derived monocytes, macrophages and dendritic cells and their their primary blood derived counterparts
ERP124468Disentangling corn root mycobiome in relation to soil physicochemical factors and plant productivity
ERP124470Alterations in gut microbiota do not play a causal role in diet-independent weight gain caused by ovariectomy
ERP124471Obesity-related Metabolome and Gut Microbiota Profiles of Juvenile Gottingen Minipigs Long-term Intake of Fructose and Resistant Starch
ERP124472Gut microbiota-specific IgA+ B cells traffic to the CNS in active multiple sclerosis
ERP124478Analysis of the oral microbiota composition during four weeks of commercial heliox saturation diving to 200 meters by 16S RNA sequencing
ERP124484Genome of the oleaginous yeast Rhodotorula toruloides CBS 14 assembled by a combined approach of long- and short read sequencing
ERP124486Illumina sequencing analysis of mutagenicity of EvoluGene
ERP124487Russian Chickens
ERP124488Azithromycin_resistant_Salmonella_Typhi_in_Chandigarh__India
ERP124494Campylobacter isolates variable, Sweden
ERP124497Metagenome analysis of fecal microbiota from antibiotic treated mice that presented different susceptibility to VRE infection
ERP124498In situ incubation in the deep continental subsurface
ERP124499Relative contributions of egg-associated and substrate-associated microorganisms to Black Soldier Fly larval performance and microbiota
ERP124500Amplicon sequence of sewage sludge, sewage sludge amended soils and sewage sludge unamended soils
ERP124503Shotgun metagenomics of total DNA isolated from intestinal content of wild and domestic animals
ERP124506monophasic variant of Salmonella Typhimurium outbreak in France 2020
ERP124510Retrospective analysis of carbapenem-resistant Acinetobacter baumannii over 6.5-year-period in a single hospital
ERP124513Study coverage of the Arabidopsis thaliana radA mutant on cpDNA
ERP124514Study recombination of the Arabidopsis thaliana radA mutant on cpDNA
ERP124515Microbiology and genomics of Acinetobacter baumannii causing neonatal sepsis in a major children's hospital in Vietnam in 2018
ERP124518EMG produced TPA metagenomics assembly of PRJNA542280 data set (Oral Microbiome in Fanconi Anemia).
ERP124519EMG produced TPA metagenomics assembly of PRJNA531081 data set (Sediment Metagenome of River Yamuna (Wazaribad , New Delhi s1)).
ERP124520EMG produced TPA metagenomics assembly of PRJNA529797 data set (Sediment Microbiome of River Ganga (Jana village , Kanpur s3)).
ERP124521EMG produced TPA metagenomics assembly of PRJNA529749 data set (Sediment Microbiome of River Ganga (Nawabganj, Kanpur s1)).
ERP124522EMG produced TPA metagenomics assembly of PRJNA531144 data set (Sediment Microbiome of River Ganga (Lalbag,Murshidabad, west Bangal F3)).
ERP124523EMG produced TPA metagenomics assembly of PRJNA531106 data set (Sediment Microbiome of River Ganga (Paharghati Dhulian, west Bengal F2)).
ERP124524EMG produced TPA metagenomics assembly of PRJNA531084 data set (Sediment Microbiome of River Ganga (Below Farakka bridge, west Bengal F1)).
ERP124526EMG produced TPA metagenomics assembly of PRJNA531097 data set (Sediment Metagenome of River Yamuna (Faizupur Khadar , New Delhi s3)).
ERP124527EMG produced TPA metagenomics assembly of PRJNA529770 data set (Sediment Microbiome of River Ganga (Jajmau, Kanpur s2)).
ERP124531Salmonella enterica serovar I.4,5,12:i:- outbreak associated with consumption of horse meat, France
ERP124534Metagenome analysis of fecal microbiota from mice to test the protective effect of ProBac
ERP124535starter culture-initiated cocoa fermentations followed up trough metagenetics
ERP124536CRISPRi-knockdowns of enzymes identify mechanisms that enable metabolic robustness in E. coli
ERP124537Campylobacter outbreak Sweden 2020
ERP124538EMG produced TPA metagenomics assembly of PRJNA531090 data set (Sediment Metagenome of River Yamuna (Okhla Barrage, New Delhi s2)).
ERP124539Bacteriplankton from Patagoinan shallow lakes
ERP124541Loci associated with antibody response in feral swine (Sus scrofa) infected with Brucella suis
ERP124542Whole genome sequencing of several lesser white-fronted goose (Anser erythropus) from diverse locations.
ERP124543Metatranscriptomic analysis of fecal microbiota from mice to identify the mechanism by which ProBac inhibits VRE colonization
ERP124544The samples here include 4 different V. minor tissue types and experimental conditions sequenced on the Illumina HiSeq2500
ERP124548American Foulbrood disease agent, Paenibacillus larvae, genomic variability in Europe
ERP124549AST and genomic analysis of 42 S. aureus isolates collected at Fort Portal Regional Referral Hospital, by the hospital microbiology laboratory between 2017 and 2019; primarily derived from skin wounds or suspected urinary tract or bloodstream infections.
ERP124551Bacterioplankton from Patagonian reservoirs
ERP124560RNA-seq of zebrafish adult MCU mutant hearts
ERP124561Genome sequencing of commensal bacteria included in the protective mix ProBac
ERP124562TCR Amplicon sequencing of the C57Bl/6 CD4+ splenic repertoires induced during a P. chabaudi infection
ERP124564GENETIC EVALUATION IN CHILDREN WITH EYE ANOMALIES ASSOCIATED WITH CONGENITAL ZIKA SYNDROME
ERP124566Histone H3 distribution in A. thaliana low rDNA copy line vs WT
ERP124567Detection of differential RNA modifications from direct RNA sequencing of human cell lines
ERP124568Genetic analyses of mtDNA (cytochrome-b) of Siberian chipmunks introduced to Europe
ERP124570EMG produced TPA metagenomics assembly of PRJEB14491 data set (metagenomic Shotgun analysis of cecum microbiome of poultry).
ERP124574Genome-wide plasma cell-free DNA methylation profiling in pancreatic cancer patients using MeDIP-seq
ERP124575Histone H3 distribution in A. thaliana low rDNA copy line vs WT
ERP124577Impact of a probiotic soy beverage supplemented with acerola by-product on gut microbiota from lean and obese subjects assessed in a dynamic in vitro model of the human colon (TIM-2)
ERP124581Invasive freshwater snails form novel microbial relationships
ERP124582Evolution of diversity explains the impact of pre-adaptation of a focal species on the structure of a natural microbial community.
ERP124583Comparative genome analysis of 33 Chlamydia strains reveals characteristic features of Chlamydia psittaci and closely related species
ERP124584Treponema_Pallidum_genomic_diversity_within_and_between_patients_in_Ghana
ERP124586Characterization of prokaryotic and microeukaryotic microbiomes of larval pools of mosquitoes sampled in three different countries (Kenya, Guinea Conakry and Burkina Faso) and in laboratory maintained Anopheles lineages.
ERP124589Providing a snapshot of somatic variation for the patient-derived xenograft cancer models distributed by The Jackson Laboratory.
ERP124592Staphylococcus aureus reservoirs in renal medicine study
ERP124595Bacterial gut microbiota composition of Indonesian schoolchildren from urban Makassar - follow-up
ERP124597A universal protocol for isolating retinal ON bipolar cells across species via fluorescence-activated cell sorting - RNAseq of cell populations
ERP124601Metabolic alterations of liver Connexin-43 knockout in mice
ERP124602Transcriptome sequencing of seeds of three rice lines of Kasalath with different anti-aging ability guided by miR164c
ERP124604MicroRNA expression profile in Newcastle disease virus-infected HeLa cells
ERP124606Small RNA-sequencing in plasma of acute stroke code patients
ERP124607Rapid Scanning Electron Microscopy Detection and Sequencing of SARS-CoV-2 and Other Respiratory Viruses
ERP124608Chromosome-level assembly of the Atlantic silverside genome reveals extreme levels of sequence diversity and structural genetic variation
ERP124610DNA extraction comparison testing 2019-2020
ERP124611GENETIC DIVERSITY OF TWO SPECIES ELEUTHEROCOCCUS MAXIM. ON THE NORTHERN LIMITS OF THEIR DISTRIBUTION
ERP124612Comparative hormonal and expression analyses of two barley genotypes with contrasting drought tolerance.
ERP124614RNA-seq analysis of V. minor leaves and roots grown in different light conditions
ERP124615Biogeography of Microorganisms in Kindergarten Reveals Higher Pathogenic Burden in Children Hands.
ERP124617A retrospective analysis of Staphylococci species causing neonatal sepsis in low- and middle- income countries
ERP124618Effect of kefir on soybean isoflavone aglycones content in soymilk kefir
ERP124621RNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
ERP124622RRBP1 rewires Cisplatin resistance in Oral Squamous Cell Carcinoma by regulating YAP-1
ERP124623Single-cell 5' Gene Expression and V(D)J Amplification (10X Genomics) of splenic CD4+ T cells from Plasmodium chabaudi infected mice
ERP124624Long-range sequencing of genomic DNA from rice-infecting Magnaporthe oryzae isolates from Italy
ERP124625Surgical Menopause and Estrogen Therapy Differently Modulate Changes in Gut Microbiota, Obesity Markers, and Cognitive Health
ERP124627RNA-Seq, dRNA-Seq and Term-Seq of Streptomyces griseus NBRC13350 and Term-Seq of Streptomyces coelicolor M145
ERP124630TGS of HLA-E gene
ERP124632Whole genome sequencing of Brucella from Ethiopia
ERP124633Whole genome sequencing of 183 Chinese, Malay and Indian patients from Singapore was conducted to identify genetic variants associated with atorvastatin induced myalgia. Variants that were highly associated with myalgia were identified and incorporated into machine learning models.
ERP124634Effect of CFB2 depletion in Trypanosoma brucei
ERP124638Microbiome of Ts65Dn (Down Syndrome model) and WT mice on control and high-fat diet
ERP124639RNAseq of biopsies of RA patients treated with anti-IL17
ERP124641The cellular and molecular pathways affected by IL-12p40/IL-23p40 blockade with ustekinumab in the synovium of psoriatic arthritis (PsA) patients.
ERP124642Unexpected Mycoplasma hominis infection in two renal transplant recipients traced back to the same donor by whole genome sequencing
ERP124643Leishmania cosmid library screen with DNDi6148
ERP124645BIOME-Preserve: A Novel Microbiome Transport Medium for Culture Recovery
ERP124649Predictive biomarkers for responsiveness to FOLFOX in gastric cancers based on integrative profiling of patient-derived xenografts
ERP124650Phylogenetic relationships between the subgenera Phacoxytropis and Tragacanthoxytropis of the genus Oxytropis based on chloroplast DNA and ITS nrDNA sequence data
ERP124654The carboxylesterase family in salmon lice (Lepeophtheirus salmonis) and its role in drug resistance
ERP124655Combating antimicrobial resistance in the Norwegian food production chain, NextSeq dataset
ERP124656CAZymes in Maribacter dokdonensis 62-1
ERP124658Transcriptome profiling of Lolium and Festuca spp leaf and root under drought conditions
ERP124659The emergence of a novel disease in the already declining population of the white-winged snowfinch is of high concern and asks for future monitoring of host and pathogen
ERP124660The sequences are from a laboratory experiment, where we tested how a legacy of freezing-thawing and drying-rewetting cycle affect the microbial community and its response to an additional fluctuation.
ERP124661Microbiome of medicinal plants
ERP124663Diet induces parallel changes to the gut microbiota and problem solving performance in a wild bird
ERP124666Combating antimicrobial resistance in the Norwegian food production chain, HiseqX dataset
ERP124667Shotgun sequencing of whole adult Comal Springs Riffle Beetle
ERP124668JPL Spacecraft Assembly Facility Spore to VO
ERP124670Deployment of heated panels in the Menai Strait: applications to a temperate ecosystem and community analysis of a short-term deployment
ERP124672The complete mitochondrial genome of the strawberry aphid Chaetosiphon fragaefolii Cockerell, 1901 (Hemiptera: Aphididae) from California, USA
ERP12467316S rRNA amplicon sequence of ileal mucosa bacteria in broiler chickens challenged with NE
ERP124674Shotgun metagenomic sequencing of the fecal microbiome to predict response to frontline high-dose steroids in patients with lower gastrointestinal acute graft-versus-host disease
ERP124678Genotyping of Francisella tularensis subsp. holarctica from hares in Germany
ERP124679PROVIT: Supplementary probiotic treatment and vitamin B7 in depression - a randomized controlled trial
ERP124680Soil stabilisation for DNA metabarcoding of plants and fungi Implications for sampling at remote locations or via third-parties
ERP124684Combating antimicrobial resistance in the Norwegian food production chain, Hiseq2500 dataset
ERP124685Sorghum Whole-genome GBS SNP Genotyping
ERP124690Genome sequencing of SARS-CoV-2 isolated in Malaysia
ERP124691periscope: sub-genomic RNA identification in SARS-CoV-2 Genomic Sequencing Data
ERP124692Tissue-Specific Transcriptome Analysis Reveals Lignocellulose Synthesis Regulation in Elephant Grass
ERP124693Molecular epidemiology and antimicrobial resistance in clinical Clostridioides difficile isolates from Thailand during 2017-2018
ERP124694Biogeography of Microorganisms in Kindergarten Reveals Higher Pathogenic Bacteria Proportion on Children Hands than Daily Items
ERP124695Long-read sequencing data and hybrid assemblies associated to the study Enterococcus_faecalis_global_phylogeny-sc-5337
ERP124698Genomic characterization of Achromobacter spp. isolates from chronic and occasional lung infection in cystic fibrosis patients
ERP124699Microbiota-root-shoot axis modulation by MYC2 alleviates light 1limitation stress in Arabidopsis, Bacterial Data
ERP124700Microbiota-root-shoot axis modulation by MYC2 alleviates light 1limitation stress in Arabidopsis, Fungal data
ERP124701Microbiota-root-shoot axis modulation by MYC2 alleviates light 1limitation stress in Arabidopsis, Oomycetal data
ERP124702Epidemiological population analysis of Neisseria gonorrhoeae isolates from 2014-2019 from Amsterdam, the Netherlands
ERP124704Multi-marker DNA metabarcoding reflects tardigrade diversity in different habitats
ERP124706RNA-seq of Oryza sativa L. Dongjin and Iksan 526 seeds at 20 days after heading
ERP124707RNA-seq of Trypanosoma brucei brucei ZC3H22 RNAi depletion in procyclic forms
ERP124708Asymmetric chromosome segregation and cell division in DNA damage-induced bacterial filaments
ERP124709Genome-resolved metagenomics suggests a mutualistic relationship between Mycoplasma and salmonid hosts
ERP124710Wadeable stream benthic algae samples collected during annual surveys. DNA sequenced to compare DNA and morphology-based taxonomy.
ERP124712Effects of AGP Alternatives on broilers under a NE challenge
ERP124714We investigated the effect of short vs long antibiotic treatments on gut microbiota of patients with Gram-negative bacteremia by whole metagenome shotgun sequencing.
ERP124715Antimicrobial resistance E_coli in a high artic reindeer subspecies
ERP124716Large-scale variation in SNP density within the laboratory axolotl (Ambystoma mexicanum)
ERP124717RNA-seq of H2afj-ko and isogenic WT C57/Bl6-N mouse embryonic fibroblasts in proliferation and after etoposide-induced senescence.
ERP124720Community shift of a mixed culture during benzene degradation under nitrate reducing conditions
ERP124721Evaluating the microbial context of SARS-CoV-2 in patients and the hospital built environment
ERP124722Combating antimicrobial resistance in the Norwegian food production chain, HiSeq2500 rapid run dataset
ERP124723Asymmetric coalescence of seed and soil microbiota
ERP124724EPIS Submission on 3 German C. jejuni clusters
ERP124725Single-cell atlas of the first intra-mammalian developmental stage of the human parasite Schistosoma mansoni
ERP124727The evolution of phenotypic plasticity in response to temperature stress
ERP124728KPC containing IncF plasmid genetic diversity between epidemiologically related and unrelated Enterobacteriaceae.
ERP124730Part of a global study of the evolution and spread of ST-1901. See the paper "Antibiotic treatment regimes as a driver of the global population dynamics of a major gonorrhea lineage", accepted in Mol Biol Evol for more info including additional isolates from other study accessions.
ERP124733Molecular identification (ITS2 barcoding) of the mosquitoes of the Maculipennis complex in northern Italy
ERP124736Barcoding of Anopheles labranchiae
ERP124737NGS data for Salmonella Surveillance in Belgium
ERP124738MBA DToL legacy data
ERP124739Compost spatial heterogeneity promotes evolutionary diversification of a bacterium. Published in Journal of Evolutionary Biology. van Houte 2020.
ERP124743Identifying microbial and physicochemical risks affecting the quality of potable water supplied by selected shallow groundwater wells in Finland
ERP124744Flooding but not phosphorus availabilities controls the intensity of indigenous arbuscular mycorrhizal colonization in lowland indica rice
ERP124747RNA-seq of small RNAs in WI-38hTERT/sh3-H2AFJ and WI-38hTERT/sh-NT fibroblasts in proliferation and etoposide-induced senescence
ERP124748Assembly of L. sativa mtDNA combining Illumina MiSeq paired-end reads and Pacbio SMRT reads
ERP124749RNA-seq of SARS-CoV-2-infected human primary hepatocyte-derived spheroids upon interferon a2 and baricitinib treatment
ERP124750Responses of Pseudomonas aeruginosa to last resort antibiotics monitored by transcriptome and translatome analyses
ERP12475116S rRNA lung microbiota study in mechanically ventilated patient: a pilot study
ERP124752Responses of Pseudomonas aeruginosa to last resort antibiotics monitored by transcriptome and translatome analyses
ERP124753VirION2: a short- and long-read sequencing and informatics workflow to study the genomic diversity of viruses in nature
ERP124754A study focusing on the characterization of the microbiota of larvae and adults of the Asian tiger mosquito, Aedes albopictus, and on the relative impact of the breeding site water in shaping the bacterial communities.
ERP124761Low coverage shotgun sequencing of woolly mammoth and ancient canid samples.
ERP124763Metagenomes of a contaminated urban lake
ERP124767Response of Salivary Microbiota to Caries Preventative Treatment in Australian Indigenous Children
ERP124768Genomics, proteomics and phenotypic analysis in 190 strains of E. coli (70) and K. pneumoniae (120) for investigating antimicrobial resistance.
ERP124771Definition of the insertion profile of Ifp2 transposons containing a NeoR using G401 cells expressing PGBD5 Hs524 using LAM-PCR.
ERP124772Patients exposed to vancomycin resistant enterococci (VRE) during in-hospital outbreaks in a low endemic setting: who is at risk for acquisition? Report of three outbreaks with VRE in Switzerland, 2018-2019
ERP124774TbSAP is a novel chromatin protein repressing metacyclic Variant Surface Glycoprotein expression sites in bloodstream form Trypanosoma brucei
ERP124775RNaseq of two human LUAD cell lines with knockout of STK11, KEAP1, both genes or no genes.
ERP124778RNA-seq of rRNA-depleted total RNAs in WI-38hTERT/sh3-H2AFJ and WI-38hTERT/sh-NT fibroblasts in proliferation and etoposide-induced senescence.
ERP124779Definition of the insertion profile of Tcr-pble transposons containing a NeoR using G401 cells expressing PGBD5 Hs524 using LAM-PCR.
ERP124780Definition using LAM-PCR of the insertion profile of IFP2 transposons containing a NeoR using the wild type CRD-less PB transposase (1-558) N-terminally fused with a SV40 NLS
ERP124781RNA-seq of Huh7 cell after G6PD enzyme activity inhibitor RRx-1 treated with 20µM concentrations for 24h
ERP124784Comparison of Tn-seq of Escherichia coli using B-2163 and MFDpir as donor strains.
ERP124785An innovative pilot experiment to assess the efficiency of pharmaceutical plant wastewater treatment and the resulting decrease in effluent toxicity to periphytic microbial biofilms
ERP124786Alteration of gut microbiota in carbapenem-resistant Enterobacteriaceae carriers during fecal microbiota transplantation according to decolonization periods
ERP124789UI-680 - S. Bovismorbificans outbreak
ERP124791Assembly of mtDNA from wild lettuce species (L. saligna, L. serriola & L. virosa)
ERP124793ChIP-seq of RNA polymerase II from WI-38hTERT/sh3-H2AFJ and WI-38hTERT/sh-NT fibroblasts in proliferation and etoposide-induced senescence.
ERP124794ChIP-seq of H3-K4me3 from WI-38hTERT/sh3-H2AFJ and WI-38hTERT/sh-NT fibroblasts in proliferation and etoposide-induced senescence.
ERP124796Little parallelism in genomic signatures of local adaptation in two sympatric, cryptic sister species
ERP124797RNA-Seq of Oryza sativa Dongjin (rice) wild type and gori mutant anthers
ERP124798Infections of A. thaliana with SynComs of Pseudomonas (PathoCom, CommenCom, MixedCom)
ERP124800Genomic alterations associated with drug vulnerabilities and prognosis in adenocarcinoma at the gastroesophageal junction
ERP124803RNA-seq of human donors with severe type 1 interferonopathy due to germline STAT2 gain-of-function
ERP124805Polyporus tubaeformis (Basidiomycota, Polyporaceae) documented from the Czech Republic, Slovakia and Ukraine
ERP124807Bionano data used for the Human Genome Structural Variation Consortium analyses
ERP124809CTCF ChIP-seq for equine FAANG project
ERP124810E.coli polysome profiling for WT and TrmH strains
ERP124817HEK293 cells transfected with polychromatic reporter constructs (pJD49 or pKB01) and respective inducer (PIT, ET or tTA) to identify/confirm the splicing patterns obtained.
ERP124820Exome sequencing Angelman trio
ERP124822Co-inoculations with rhizobia and arbuscular mycorrhizal fungi alters mycorrhizal composition and lead to synergistic growth effects in cowpea that are fungal species-dependent
ERP124823Dissecting esophageal squamous-cell carcinoma ecosystem by single-cell transcriptomic analysis
ERP124824RBGE DToL legacy data
ERP124826C*01:02 new
ERP124829Study of bacterial diversity associated with Rubus ulmifolius
ERP124834Deciphering the cross-talk between host and pathogen during intracellular persistence of Staphylococcus aureus within mast cells
ERP124836Analysis of human fecal metagenomes from adults and infants, to investigate strain persistance, dispersal and purifying selection of bacterial strains.
ERP124838Broiler gut metagenome
ERP124839Genotyping by sequencing of caraway (Carum carvi)
ERP124841OXF DToL legacy data
ERP124844NHM DToL legacy data
ERP124845KEW DToL legacy data
ERP124846SAN DToL legacy data
ERP124851Genomic variants associating with canine hip dysplasia
ERP124854Polyphasic taxonomy lead to new members of the family Cytophagaceae
ERP124857A chromosome-scale assembly of allotetraploid Brassica juncea (AABB) elucidates comparative architecture of the A and B genomes
ERP124858We showed that M. ulcerans-specific DNA sequences were detected on the unbreached skin of 6/52 (11.5%) asymptomatic farmers living in Sindou versus 0/52 (0%) of those living in the non-endemic region of Tenkodogo. Then, we cultured the skin microbiota of asymptomatic M. ulcerans carriers and negative control individuals, all living in the region of Sindou. A total of 84 different bacterial and fungal species were isolated, 21 from M. ulcerans-negative skin samples, 31 from M. ulcerans-positive samples and 32 from both. More specifically, Actinobacteria, Aspergillus niger and Aspergillus flavus were significantly associated with M. ulcerans skin carriage.
ERP124862RNA-seq of biopsies from the bowels of patients with Ulcerative Colitis classified as healed versus non-healed according to different classification scores
ERP124863Mycobacterium Tuberculosis sequencing
ERP124864Population genomics of murine Staphylococcus aureus
ERP124865New members of the family Cytophagaceae
ERP124866Functional potential of plastic-associated microorganisms
ERP124867NHM manifest 20201105
ERP124868Sanger DToL manifest
ERP124870Description of a new species of Aureopterix from the Bach-Ma National Park, VIetnam
ERP124872In this work, we present an improved version of the scheme that is based on the same genes and MLST database as Bom's MLST scheme, but with newly designed primers for nested-1 and nested-2 steps under stringent conditions. Furthermore, we introduce a third primer set for the sequencing step, which considerably improves the performance of the assay.
ERP124873eDNA metabarcoding reveals dietary niche overlap among herbivores in an Indian wildlife sanctuary
ERP124875Purified human tRNAPhe analyzed by deep sequencing
ERP124876Factors shaping bark beetle associated fungal assembleges
ERP124878antibiotics
ERP124881Dynamics of extended-spectrum beta-lactamase-producing Enterobacterales colonization in long-term carriers following travel abroad
ERP124884High-throughput RNA sequencing of trophoblast-like cells conversion from human embryonic stem cells by BMP4
ERP124886Brucella abortus ChipSeq analysis of BvrR
ERP124887Characterization of the novel Kotalahti bat lyssavirus
ERP124889RBGE_0002
ERP124890MBA_0003
ERP124891MicroRNAs regulate metabolic phenotypes during Multicellular Tumor Spheroids progression
ERP124892Whole genome sequencing of three samples of Capsella bursa-pastoris in North Italy
ERP124894oral metagenome
ERP124895SARS-CoV-2 genome sequences collected in Bern, Switzerland
ERP124897A collection of Candida albicans aneuploid strains
ERP124898ToL_Meiofauna_R_D
ERP124900Wheat genetic variation map 1.0Â
ERP124902EMG produced TPA metagenomics assembly of PRJNA419239 data set (Microbial communities in two hot springs sediments derived from the Kamchatka peninsula).
ERP124904Tn-seq of Vibrio cholerae in presence of 0.2% of L-arabinose
ERP124906Effects of expressing fungal glucuronoyl esterase in aspen on transcriptome in different tissues
ERP124910A taxon-wise insight into rock weathering and nitrogen fixation functional profiles of proglacial systems
ERP124911Selection for virulence against resistance in the potato cyst nematode Globodera pallida.
ERP124914Identification of Leukemia-associated mutations in AML patients
ERP124917organic carbon, predator, resistance and resilience, community stability, urban river, aquatic microbial community
ERP124920First report of European mountain ash ringspot-associated virus in serviceberry (Amelanchier spp.) in Sweden
ERP124921EMG produced TPA metagenomics assembly of PRJEB19090 data set (Potential and active functions in the gut microbiota of a healthy human cohort).
ERP124922Effect of Spent Coffee grounds on rumen bacterial population
ERP124925Changes in Pdgfra-positive mesenchymal progenitors during muscle regeneration under normal and obese condition.
ERP124926Origin and evolutionary history of Pyricularia oryzae fungal pathogens infecting maize and barnyard grass in Iran
ERP124928scRNA-seq of human fetal duodenal enteroids grown in EGF and/or NRG1
ERP124929Land use in urban areas impacts the composition of soil bacterial communities involved in nitrogen cycling: A case study form Lefkosia (Nicosia) Cyprus
ERP124930Swedish meningococcal carriage study performed in 2018-2019.
ERP124932EMG produced TPA metagenomics assembly of PRJNA335670 data set (Metagenomic Sequencing of Hot Springs from Central India).
ERP124933EMG produced TPA metagenomics assembly of PRJDB7293 data set (Metagenomic analysis of Kirishima hot springs).
ERP124935Cetacean Morbilli virus H gene sequence and phylogenetic analysis
ERP124942Reducing the Impacts of Biofouling in RO Membrane Systems through In Situ Low Fluence Irradiation Employing UVC-LEDs (doi: 10.3390/membranes10120415)
ERP124943Solvent tolerant bacteria from hydrocarbon contaminated habitats
ERP124944Local immune response to dietary antigens triggered by bacterial infection leads to food-induced abdominal pain
ERP124946Circadian rhythm of the fecal microbiota in laying hens
ERP124947As an important part of biological rhythm, circadian rhythm plays a crucial role in the microbiota composition of laying hens. The purpose of this experiment was to investigate the circadian rhythm of fecal microbiota in laying hens.
ERP124949A metabarcoding comparison of taxonomic richness and composition between the water column and the benthic boundary layer.
ERP124953Genome-wide relatedness shapes predatory behavior of Pristionchus pacificus
ERP124954Utilisation of next generation sequencing technology to support meat safety and shelf life extension
ERP124955PopGen 16S rRNA gene skin 2020
ERP124956SARS-CoV-2 was grown by inoculation of VeroE6 cells with 200 µl nasopharyngeal swab of a COVID-19 patient.
ERP124958EMG produced TPA metagenomics assembly of PRJNA649273 data set (Kidney stone patient microbiome).
ERP124959EMG produced TPA metagenomics assembly of PRJNA311332 data set (Bacteria isolated from carboxylate platform fermentations inoculated with microbial communities from extreme environments.).
ERP124960Retrospective surveillance of necrotising typhlitis associated with Brachyspira spp. in British rhea
ERP124961Interaction of intestinal bacteria with human rotavirus during infection in children
ERP124964Whole-genome resequencing confirms reproductive isolation between sympatric demes of brown trout (Salmo trutta) detected with allozymes
ERP124965Klebsiella pneumoniae genome sequencing
ERP124967Cellular and extracellular vesicle RNA sequence for E-cadherin-RFP EMT reporter system expressing mouse breast cancer cell line Py2T during EMT/MET
ERP124970African Leopard - Population Genomics
ERP124971Transcriptome analysis of 3D model of blood-brain barrier exposed to Borrelia garini
ERP124972RNA-seq of mouse small intestinal organoids treated with interferon-gamma
ERP124975Genomic insights of the globally disseminated multidrug-resistant K. pneumoniae Clonal Group 147
ERP124979Biannual administrations of azithromycin and the gastrointestinal microbiome of Malawian children: A nested cohort study within a randomized controlled trial
ERP124981Heterogeneous hunter-gatherer and steppe-related ancestries in Late Neolithic and Bell Beaker genomes from present-day France
ERP125025RNA-seq of mouse small intestinal epithelial cells sorted from duodenum, jejunum and ileum
ERP125026Transcriptome analysis of 3D model of blood-brain barrier exposed to West Nile virus (WNV)
ERP125027Comparative whole-exome and UTR sequencing of non-muscle invasive urothelial carcinomas and metachronous muscle invasive urothelial carcinomas of the urinary bladder.
ERP125031mutational analysis of exostosin 1 mutations in Jordanian patients with heredietary Osteochondroma
ERP125033EMG produced TPA metagenomics assembly of PRJNA528468 data set (CH09 Metavirome).
ERP125034Meningococcal ST-4821 complex – western clade, sexual transmission, antibiotic susceptibility, vaccine coverage
ERP125035Whole genome sequence-based surveillance of Streptococcus agalactiae group B strains in Portugal
ERP125039Effects of Mesobiliverdin IX-Enriched Microalgae Feed on Gut Health and Microbiota of Broilers
ERP125043No alteration of gut microbiota in patients with myasthenia gravis compared to control patients: results from the MYBIOM trial
ERP125044The enhancing effects of bacterial community on phosphorus retaining in sediment
ERP125046WGS of Neisseria meningitidis
ERP125047Differential degradation of RNA species by autophagy related pathways in plants
ERP125049Effects of Mesobiliverdin IX alpha-Enriched Microalgae Feed on Gut Health and Microbiota of Broilers
ERP125052Transcriptome analysis of 3D model of blood-brain barrier exposed to tick-borne encephalitis virus (TBEV)
ERP125056Genomic shotgun sequences of Trypanosoma brucei brucei from Uganda
ERP125062Bulk RNA-seq analysis of Btk-deficient leukemia
ERP12506516S rRNA sequencing of samples from universal stool bank donors
ERP125068Equine FAANG ATAC-seq Pilot
ERP125069Root-associated mycobiomes of common temperate plants (Calluna vulgaris and Holcus lanatus) are strongly affected by winter climate conditions.
ERP125070Ancient Mammalian and Plant DNA from Late Quaternary Stalagmite Layers at Solkota Cave, Georgia
ERP125076Description of the farmed Atlantic salmon gill microbiome during an Amoebic Gill Disease episode along the West Coast of Ireland
ERP125077Influence of the amoebic gill disease on the Atlantic salmon (Salmo salar L.) gill microbiome in a laboratory scale trial: bacterial immigration from the surrounding water.
ERP125079Repeated hybridisation increased diversity in the door snail complex Charpentieria itala in the Southern Alps
ERP125084Sample od DVMO Brasil, with new allele HLA-DRB1*03.
ERP125088Peromyscus maniculatus Genetic Variant Analysis
ERP125089EMG produced TPA metagenomics assembly of PRJNA339844 data set (subsurface metagenome Metagenome).
ERP125090The history of maize domestication and adaptation as revealed by a genome-wide survey of SNP
ERP125093Comparative study of different approaches to use MinION on a routine basis of infection diagnosis