FASTQExperiment Detail
| Title | Illumina HiSeq 3000 sequencing of SAMD00089536 |
| Design Description | |
| Organism | Nitrospira japonica |
Library Description
| Name | AHL productive E.coli sup. 3 |
| Strategy | ssRNA-seq |
| Source | TRANSCRIPTOMIC |
| Selection | Inverse rRNA |
| Layout | SINGLE |
| Construction Protocol | The ribosomal RNA was removed by using RiboZero Epidemiology. The sequence library was prepared according to the Agilent SureSelect Strand Specific RNA Prep Kit protocol (skip the PolyA selection step). |
Platform
| Platform | ILLUMINA |
| Instrument Model | Illumina HiSeq 3000 |
Processing
| Base Calls | |
|---|---|
| Sequence Space | |
| Base Caller | |
Spot Information
| Number of Reads per Spots | 0 |
| Spot Length | 36 |
Read Spec
| Read Index 0 | |
|---|---|
| Read Label | |
| Read Class | Application Read |
| Read Type | Forward |
| Base Coord | 1 |
