Experiment Detail
| Title | NextSeq 500 paired end sequencing; C. elegans mitotic zone RNA-seq |
| Design Description | C. elegans mitotic zone RNA-seq |
| Organism | Caenorhabditis elegans |
Library Description
| Name | Sample 5_p |
| Strategy | RNA-Seq |
| Source | TRANSCRIPTOMIC |
| Selection | cDNA |
| Layout | PAIRED |
| Orientation | |
| Nominal Length | 200 |
| Nominal Sdev | 50 |
| Construction Protocol | Collect N2 hermaphrodites at L4 + 4 days Dissection of individual mitotic zones of C. elegans hermaphroditic gonadal arms Construct library |
Platform
| Platform | ILLUMINA |
| Instrument Model | NextSeq 500 |
Processing
| Base Calls | |
|---|---|
| Sequence Space | |
| Base Caller | |
Spot Information
| Number of Reads per Spots | 0 |
| Spot Length | 82 |
Read Spec
| Read Index 0 | |
|---|---|
| Read Label | |
| Read Class | Application Read |
| Read Type | Forward |
| Base Coord | 1 |
| Read Index 1 | |
| Read Label | |
| Read Class | Application Read |
| Read Type | Reverse |
| Base Coord | 42 |
Navigation
|
Submission | ERA688087 |
 FTP
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Study | ERP016796 | ||
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Sample | ERS1288037 | ||
|
Run | ERR1562484 |
FASTQ
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SRA
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