Experiment Detail
| Title | Illumina HiSeq 2000 sequencing; Whole transcriptome profiling of 63 breast cancer tumours |
| Design Description | Whole transcriptome profiling of 63 breast cancer tumours |
| Organism | Homo sapiens |
Library Description
| Name | C30_s |
| Strategy | RNA-Seq |
| Source | TRANSCRIPTOMIC |
| Selection | RANDOM |
| Layout | SINGLE |
| Construction Protocol | Fresh frozen breast tissue samples were obtained from women who had surgery at the Huntsman Cancer Hospital from 2009-2012 RNA libraries were made with the Illumina TruSeq Stranded mRNA Sample Preparation kit with oligo dT selection according to the manufacturer's protocol |
Platform
| Platform | ILLUMINA |
| Instrument Model | Illumina HiSeq 2000 |
Processing
| Base Calls | |
|---|---|
| Sequence Space | |
| Base Caller | |
Spot Information
| Number of Reads per Spots | 0 |
| Spot Length | 0 |
Read Spec
Navigation
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Submission | ERA688090 |
 FTP
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Study | ERP016798 | ||
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Sample | ERS1288075 | ||
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Run | ERR1562522 |
FASTQ
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SRA
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