Search Results ( 51 studies )

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#STUDYSUBMISSIONSTUDY_TITLESTUDY_TYPEORGANISM BASESSUBMITTEDCENTER_NAME
1 DRP001124 DRA001077 Prevalence of hepatitis C virus subgenotypes 1a and 1b in Japanese patients: ultra-deep sequencing analysis of HCV NS5B genotype-specific region Other Hepacivirus C 29.2M 2013-07-12 CHIBA_U
2 DRP002604 DRA002750 MiSeq analysis on the RT-PCR amplicon of HCV from human sera. Other Hepacivirus C
Hepatitis C virus genotype 1
Hepatitis C virus subtype 1a
Hepatitis C virus subtype 1b
Hepatitis C virus subtype 2a
Hepatitis C virus subtype 2b
6.3G 2014-11-20 UT_MED
3 DRP004136 DRA005147 Evolution of drug-resistant hepatitis C virus clones during direct-acting antiviral therapy. Other Hepacivirus C 1.7G 2016-09-23 KYOTO_GM
4 ERP000373 ERA177409
ERA179185
ERA189982
ERA201066
ERA202177
ERA229167
ERA234352
ERA279243
Viral_discovery Metagenomics Canis lupus familiaris
Hepacivirus C
Homo sapiens
unidentified
3.3T SC
5 ERP001099 ERA123500
ERA163285
RNA_Virus_Capture_and_Deep_Sequencing Whole Genome Sequencing Hepacivirus C
Homo sapiens
Human immunodeficiency virus 1
8.5G SC
6 ERP001566 ERA142934
ERA204856
Deep sequencing reveals mutagenic effects of ribavirin during monotherapy of HCV genotype 1-infected patients Whole Genome Sequencing Hepacivirus C 2.3G MPI-INF
7 ERP002219 ERA194176 A primer-free whole genomic sequencing approach for single stranded RNA viruses in faecal and blood samples Whole Genome Sequencing Hepacivirus C
Norovirus
38.4G UNIVERISTY OF OXFORD
8 ERP003910 ERA250804 Next Generation Sequencing Redefines Reinfection and Relapse in Acute HCV Patients Urging a Review of Current Guidelines of Management of HCV Infection Population Genomics Hepacivirus C 53.3M BAH-GU
9 ERP005466 ERA2392524
ERA2422021
ERA326709
ERA330386
ERA335055
ERA337211
ERA366272
ERA370018
ERA388476
ERA410937
ERA411686
ERA414370
ERA417514
ERA428767
ERA432336
ERA433997
ERA434988
ERA436686
ERA439859
ERA441201
ERA441507
ERA445383
ERA446945
ICONIC Whole Genome Sequencing HIV-1 unknown group
Hepacivirus C
Human immunodeficiency virus 1
Influenza A virus
Influenza B virus
unidentified influenza virus
360.5G The Wellcome Trust Sanger Institute
10 ERP006744 ERA401034
ERA458154
The_genetic_diversity_and_phylogeography_of_hepatitis_C_virus__HCV__within_the_liver Whole Genome Sequencing Hepacivirus C 22.3G SC
11 ERP008724 ERA433999
ERA434994
ERA436692
ERA439869
ERA619838
HCV_sureselect Other Hepacivirus C 687.9G SC
12 ERP009483 ERA408631 HCV Study using NGS Other Hepacivirus C 12.2M THE UNIVERSITY OF NEW SOUTH WALES
13 ERP010426 ERA436150 ve-SEQ: Robust, unbiased enrichment for streamlined detection and whole-genome sequencing of HCV and other highly diverse pathogens Metagenomics Hepacivirus C 3G WELLCOME TRUST CENTRE FOR HUMAN GENETICS, UNIVERSITY OF OXFORD
14 ERP013200 ERA535269 Comparison of next generation sequencing technologies for the comprehensive assessment of full-length hepatitis C viral genomes Other Hepacivirus C WELLCOME TRUST CENTRE FOR HUMAN GENETICS, UNIVERSITY OF OXFORD
15 SRP000889 SRA008641
SRA008883
Comparative Genomics of Hepatitis C virus for Broad Institute Viral Genomics Initiative Other Hepacivirus C
Hepatitis C virus genotype 4
Hepatitis C virus subtype 1e
Hepatitis C virus subtype 2c
Hepatitis C virus subtype 2f
Hepatitis C virus subtype 2k
Hepatitis C virus subtype 2m
Hepatitis C virus subtype 3b
Hepatitis C virus subtype 3i
Hepatitis C virus subtype 4L
Hepatitis C virus subtype 4g
Hepatitis C virus subtype 4m
Hepatitis C virus subtype 4n
Hepatitis C virus subtype 4o
Hepatitis C virus subtype 4r
315.1M BI
16 SRP002438 SRA012580 HCV transmission bottlenecks analyzed by deep sequencing Other Hepacivirus C 43.7M 2010-04-26 University of Pennsylvania
17 SRP014156 SRA054409 Hepatitis C virus strain:plasma Genome sequencing Whole Genome Sequencing Hepacivirus C 310.2M BioProject
18 SRP034655 SRA122030 Viral HCV quasispecies sample harbouring a large deletion. Other Hepacivirus C 278.1M BioProject
19 SRP037575 SRA137682 High-throughput sequencing analysis of post-liver transplantation HCV E2 glycoprotein evolution in the presence and absence of neutralizing monoclonal antibody Other Hepacivirus C 36.6G BioProject
20 SRP037740 SRA139555 Genetic footprinting of 15-nucleotide insertion library in hepatitis C virus genome by next-generation sequencing Other Hepacivirus C 1.2G BioProject