Search Results ( 62 studies )

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#STUDYSUBMISSIONSTUDY_TITLESTUDY_TYPEORGANISM BASESSUBMITTEDCENTER_NAME
1 ERP109171 ERA1508380 Cassava genomes assembled with single-molecule long reads, optical and Hi-C maps reveal narrow genetic diversity and mono-allelic expression Other Manihot esculenta 114.7G FUNCTIONAL GENOMICS CENTER ZURICH
2 SRP006804 SRA036852 Cassava genome sequencing by DOE Joint Genome Institute Whole Genome Sequencing Manihot esculenta 12G 2011-05-17 JGI
3 SRP006810 SRA036909 Cassava sRNA libraries from non-infected and infected tissues with Xanthomonas axonopodis. pv manihotis Transcriptome Analysis Manihot esculenta 1.9G 2011-05-19 GEO
4 SRP023110 SRA081974 Digital gene expression analysis of ACMV-infected cassava Transcriptome Analysis Manihot esculenta 256.5M GEO
5 SRP028613 SRA082655 Manihot esculenta Transcriptome or Gene expression Transcriptome Analysis Manihot esculenta
Manihot esculenta x Manihot glaziovii
Manihot glaziovii
1.6G BioProject
6 SRP032782 SRA110564 Moderate stress acclimation provides immunity to stress by rewiring regulatory networks and inducing genes with protective functions in Cassava Transcriptome Analysis Manihot esculenta 1.3G GEO
7 SRP032783 SRA110565 Endogenous small-noncoding RNAs and their roles in cold response and stress acclimation in Cassava Other Manihot esculenta
Ricinus communis
1.4G GEO
8 SRP034526 SRA117611 Cassava responses to Pathogenic and non-pathogenic Xanthomonas axonopodis pv manihotis Transcriptome Analysis Manihot esculenta 20.2G GEO
9 SRP040814 SRA150772 Transcriptional response of virus-infected cassava and identification of putative sources of resistance for cassava brown streak disease Transcriptome Analysis Manihot esculenta 10.3G GEO
10 SRP041115 SRA157410
SRA158439
SRA159641
SRA159650
SRA159651
SRA159652
SRA159653
SRA159657
SRA159658
SRA159659
SRA159660
SRA159661
SRA159662
SRA159663
SRA159664
SRA159665
SRA159667
SRA159668
SRA159669
SRA307753
Cassava WGS sequencing Other Manihot esculenta
Manihot esculenta subsp. flabellifolia
Manihot esculenta x Manihot glaziovii
Manihot glaziovii
Manihot pseudoglaziovii
4T BioProject
11 SRP041383 SRA159225
SRA176462
Manihot Esculenta Genome sequencing Other Manihot esculenta 224.5G BioProject
12 SRP041770 SRA162032
SRA297529
Cassava Genome re-sequencing Whole Genome Sequencing Manihot esculenta
Manihot esculenta subsp. flabellifolia
51.9G BioProject
13 SRP042139 SRA166489 Manihot esculenta strain:W14,KU50,Arg7 Transcriptome or Gene expression Transcriptome Analysis Manihot esculenta
Manihot esculenta subsp. flabellifolia
18.7G BioProject
14 SRP044690 SRA176199 Manihot esculenta strain:T200 and TME3 Random survey Other Manihot esculenta 15.5G BioProject
15 SRP045199 SRA160582 TAL effector induced gene expression changes in Cassava Other Manihot esculenta
Manihot esculenta subsp. esculenta
134.8G BioProject
16 SRP045771 SRA180302 Potential functions of microRNAs in starch metabolism and development revealed by miRNA transcriptome profiling of cassava cultivars and their wild progenitor Other Manihot esculenta
Manihot esculenta subsp. flabellifolia
6.4G GEO
17 SRP048573 SRA188341 Manihot esculenta Transcriptome or Gene expression Other Manihot esculenta 13.9G BioProject
18 SRP048575 SRA188343 Manihot esculenta strain:ku50 Transcriptome or Gene expression Other Manihot esculenta 17.8G BioProject
19 SRP050325 SRA205332 Manihot esculenta Transcriptome or Gene expression Transcriptome Analysis Manihot esculenta
Manihot esculenta subsp. peruviana
1.1G BioProject
20 SRP051207 SRA213926 Manihot esculenta subsp. esculenta Targeted Locus (Loci) Other Manihot esculenta 879.9G BioProject