# | STUDY | SUBMISSION | STUDY_TITLE | STUDY_TYPE | ORGANISM | BASES | SUBMITTED | CENTER_NAME |
---|---|---|---|---|---|---|---|---|
1 | ERP021848 | ERA828785 | High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1 | Transcriptome Analysis | Populus trichocarpa | 248.2G | Oregon State University | |
2 | SRP026607 | SRA092246 | A comprehensive survey of degradation and 3' end modification of plant microRNAs by deep sequencing | Transcriptome Analysis | Populus trichocarpa | 1.8G | GEO | |
3 | SRP028843 | SRA097995 | SND1 Transcription Factor-Directed Quantitative Functional Hierarchical Genetic Regulatory Network in Wood Formation in Populus trichocarpa | Transcriptome Analysis | Populus trichocarpa | 7.4G | GEO | |
4 | SRP035471 | SRA127951 | Ptr-miR397a is a negative regulator of laccase genes affecting lignin content in Populus trichocarpa | Transcriptome Analysis | Populus trichocarpa | 20.3G | GEO | |
5 | SRP036860 | SRA137678 | Transcriptome analyses of the Laccaria bicolor-Populus trichocarpa mycorrhiza development | Other |
Laccaria bicolor Populus trichocarpa |
8G | GEO | |
6 | SRP038090 | SRA140394 | Single-base-resolution Methylomes of Populus trichocarpa Reveal the Association between DNA Methylation and Drought Tolerance | Other | Populus trichocarpa | 33.5G | GEO | |
7 | SRP062556 | SRA289550 | FASTmC: predictive models for non-reference-based estimations of DNA methylation | Other |
Brachypodium distachyon Brassica oleracea Erythranthe guttata Populus trichocarpa Sorghum bicolor |
48.7G | GEO | |
8 | SRP066733 | SRA313925 | Transcriptome analyses of the Laccaria bicolor-Populus trichocarpa mycorrhiza | Other | Populus trichocarpa | 20.6G | GEO | |
9 | SRP067451 | SRA320230 | Whole transcriptome Populus trichocarpa tissues transcriptome | Other | Populus trichocarpa | 3.3T | BioProject | |
10 | SRP071226 | SRA378986 | RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) | Transcriptome Analysis | Populus trichocarpa | 697.5G | GEO | |
11 | SRP072040 | SRA387743 | RNAseq of drought treated Populus trichocarpa | Transcriptome Analysis | Populus trichocarpa | 17.6G | GEO | |
12 | SRP072226 | SRA393415 | Widespread natural variation of DNA methylation within angiosperms | Other |
Beta vulgaris Brachypodium distachyon Brassica rapa Cannabis sativa Citrus clementina Cucumis sativus Erythranthe guttata Eucalyptus grandis Eutrema salsugineum Fragaria vesca Lotus japonicus Malus domestica Manihot esculenta Medicago truncatula Panicum hallii Panicum virgatum Populus trichocarpa Prunus persica Ricinus communis Setaria viridis Sorghum bicolor Theobroma cacao Vitis vinifera |
347.6G | GEO | |
13 | SRP072559 | SRA401307 | Populus trichocarpa DNase I hypersensitivity | Whole Genome Sequencing | Populus trichocarpa | 5G | BioProject | |
14 | SRP072680 | SRA401758 | Populus trichocarpa Transcriptome or Gene expression | Transcriptome Analysis | Populus trichocarpa | 22.9G | BioProject | |
15 | SRP074277 | SRA422932 | Genome-wide analysis of histone H3 lysine 9 acetylation in Populus trichocarpa under drought stress | Other | Populus trichocarpa | 61.4G | GEO | |
16 | SRP074300 | SRA422962 | RNA-seq of major tissues and xylem cell types of Populus trichocarpa | Transcriptome Analysis | Populus trichocarpa | 30.3G | GEO | |
17 | SRP103219 | SRA552135 | Differential gene expression analysis of drought responsive sense and antisense genes in Populus | Transcriptome Analysis | Populus trichocarpa | 74.9G | GEO | |
18 | SRP104773 | SRA556156 | Populus trichocarpa 93-968 X deltoides ILL-101 F1 hybrid, Genotype 52-225 Standard Draft Genome genome sequencing | Whole Genome Sequencing | Populus trichocarpa | 293.6G | BioProject | |
19 | SRP105577 | SRA558072 | Gene expression analysis of Populus trichocarpa Nisqually-1 - Stem - 015-H02 | Other | Populus trichocarpa | 6.2G | BioProject | |
20 | SRP105578 | SRA558072 | Gene expression analysis of Populus trichocarpa Nisqually-1 - Stem - 015-I07 | Other | Populus trichocarpa | 5.6G | BioProject |