Search Results ( 2016 studies )

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#STUDYSUBMISSIONSTUDY_TITLESTUDY_TYPEORGANISM BASESSUBMITTEDCENTER_NAME
1 ERP021848 ERA828785 High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1 Transcriptome Analysis Populus trichocarpa 248.2G Oregon State University
2 SRP026607 SRA092246 A comprehensive survey of degradation and 3' end modification of plant microRNAs by deep sequencing Transcriptome Analysis Populus trichocarpa 1.8G GEO
3 SRP028843 SRA097995 SND1 Transcription Factor-Directed Quantitative Functional Hierarchical Genetic Regulatory Network in Wood Formation in Populus trichocarpa Transcriptome Analysis Populus trichocarpa 7.4G GEO
4 SRP035471 SRA127951 Ptr-miR397a is a negative regulator of laccase genes affecting lignin content in Populus trichocarpa Transcriptome Analysis Populus trichocarpa 20.3G GEO
5 SRP036860 SRA137678 Transcriptome analyses of the Laccaria bicolor-Populus trichocarpa mycorrhiza development Other Laccaria bicolor
Populus trichocarpa
8G GEO
6 SRP038090 SRA140394 Single-base-resolution Methylomes of Populus trichocarpa Reveal the Association between DNA Methylation and Drought Tolerance Other Populus trichocarpa 33.5G GEO
7 SRP062556 SRA289550 FASTmC: predictive models for non-reference-based estimations of DNA methylation Other Brachypodium distachyon
Brassica oleracea
Erythranthe guttata
Populus trichocarpa
Sorghum bicolor
48.7G GEO
8 SRP066733 SRA313925 Transcriptome analyses of the Laccaria bicolor-Populus trichocarpa mycorrhiza Other Populus trichocarpa 20.6G GEO
9 SRP067451 SRA320230 Whole transcriptome Populus trichocarpa tissues transcriptome Other Populus trichocarpa 3.3T BioProject
10 SRP071226 SRA378986 RNAseq of xylem tissue of transgenic and wildtype Populus trichocarpa (NSF Plant Genome Research Program Project 0922391) Transcriptome Analysis Populus trichocarpa 697.5G GEO
11 SRP072040 SRA387743 RNAseq of drought treated Populus trichocarpa Transcriptome Analysis Populus trichocarpa 17.6G GEO
12 SRP072226 SRA393415 Widespread natural variation of DNA methylation within angiosperms Other Beta vulgaris
Brachypodium distachyon
Brassica rapa
Cannabis sativa
Citrus clementina
Cucumis sativus
Erythranthe guttata
Eucalyptus grandis
Eutrema salsugineum
Fragaria vesca
Lotus japonicus
Malus domestica
Manihot esculenta
Medicago truncatula
Panicum hallii
Panicum virgatum
Populus trichocarpa
Prunus persica
Ricinus communis
Setaria viridis
Sorghum bicolor
Theobroma cacao
Vitis vinifera
347.6G GEO
13 SRP072559 SRA401307 Populus trichocarpa DNase I hypersensitivity Whole Genome Sequencing Populus trichocarpa 5G BioProject
14 SRP072680 SRA401758 Populus trichocarpa Transcriptome or Gene expression Transcriptome Analysis Populus trichocarpa 22.9G BioProject
15 SRP074277 SRA422932 Genome-wide analysis of histone H3 lysine 9 acetylation in Populus trichocarpa under drought stress Other Populus trichocarpa 61.4G GEO
16 SRP074300 SRA422962 RNA-seq of major tissues and xylem cell types of Populus trichocarpa Transcriptome Analysis Populus trichocarpa 30.3G GEO
17 SRP103219 SRA552135 Differential gene expression analysis of drought responsive sense and antisense genes in Populus Transcriptome Analysis Populus trichocarpa 74.9G GEO
18 SRP104773 SRA556156 Populus trichocarpa 93-968 X deltoides ILL-101 F1 hybrid, Genotype 52-225 Standard Draft Genome genome sequencing Whole Genome Sequencing Populus trichocarpa 293.6G BioProject
19 SRP105577 SRA558072 Gene expression analysis of Populus trichocarpa Nisqually-1 - Stem - 015-H02 Other Populus trichocarpa 6.2G BioProject
20 SRP105578 SRA558072 Gene expression analysis of Populus trichocarpa Nisqually-1 - Stem - 015-I07 Other Populus trichocarpa 5.6G BioProject