Search Results ( 52 studies )

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#STUDYSUBMISSIONSTUDY_TITLESTUDY_TYPEORGANISM BASESSUBMITTEDCENTER_NAME
1 DRP004205 DRA005268 Induced genome evolution by transient DNA breaks Other Saccharomyces cerevisiae
Saccharomyces cerevisiae S288C
Saccharomyces cerevisiae SK1
61.1G 2016-10-31 UT-MDSLS
2 ERP000001 ERA000011 Population genomics of domestic and wild yeasts. Whole Genome Sequencing Saccharomyces cerevisiae S288C
Saccharomyces cerevisiae SK1
Saccharomyces cerevisiae W303
Saccharomyces paradoxus Q31.4
Saccharomyces paradoxus Q69.8
Saccharomyces paradoxus Q74.4
Saccharomyces paradoxus W7
Saccharomyces paradoxus Y55
Saccharomyces paradoxus Y8.1
Saccharomyces paradoxus Y8.5
Saccharomyces paradoxus Y9.6
Saccharomyces paradoxus Z1
1.9G SC
3 ERP001366 ERA144667
ERA149937
ERA1824920
ERA189207
ERA191057
ERA222816
ERA227062
ERA229173
ERA247603
ERA283712
ERA326702
ERA330373
ERA337202
ERA352201
ERA356859
ERA401022
ERA402057
ERA409483
ERA420022
ERA428758
ERA434981
ERA484760
ERA486599
Identification_of_mutational_spectra_in_fission_yeast_DNA_repair_and_chromatin_mutants__S_cerevisiae_ Whole Genome Sequencing Achromobacter sp. DRJS3
Alcaligenes sp. DRJS1
Alpheus cf. bouvieri CRH-2008
Alpheus cf. malleator CRH-2008
Ancylobacter aquaticus
Anisakis sp. HC-2005
Anisakis sp. MP-2005
Benthochromis horii
Blastomyces dermatitidis ER-3
Blastomyces gilchristii SLH14081
Candida albicans 1161
Candida tropicalis CBS 94
Cyprichromis coloratus
Homo sapiens
Kluyveromyces marxianus CBS 712
Lachancea thermotolerans CBS 6340
Lactobacillus gasseri MV-22
Linum grandiflorum
Lishizhenia
Mesorhizobium alhagi CCNWXJ12-2
Mesorhizobium robiniae
Mesorhizobium sp. CCNWAX25-1
Mesorhizobium sp. CCNWAX45-1
Mesorhizobium sp. CCNWXJ35-1
Mesorhizobium sp. CCNWYC116
Mesorhizobium sp. CCNWYC131
Millerozyma farinosa CBS 7064
Ogataea polymorpha CBS 4732
Ogataea polymorpha RB11
Pseudomonas sp. DRJS2
Rhizobium sp. CCNWXJ16-1
Rosa clinophylla
Rosa clinophylla var. clinophylla
Rosa clinophylla var. glabra
Saccharomyces cerevisiae
Saccharomyces cerevisiae S288C
Schizosaccharomyces pombe
Trichophyton rubrum CBS 118892
Trichophyton sp. IFM 41172
Uranotaenia unguiculata
Ustilago maydis FB1
Xenotilapia leptura
Xenotilapia melanogenys
Zygosaccharomyces rouxii CBS 732
fungal endophyte sp. D2-12A18-1
1.6T SC
4 ERP006949 ERA358085
ERA466460
ERA484783
ERA486631
ERA525888
ERA526660
ERA528928
ERA532392
ERA535258
ERA546308
ERA552099
ERA707839
PacBio_sequencing_of_yeast_strains Other Saccharomyces cerevisiae
Saccharomyces cerevisiae S288C
Saccharomyces cerevisiae SK1
Saccharomyces paradoxus
78.9G The Wellcome Trust Sanger Institute
5 ERP008906 ERA392218 Macrotene chromosomes provides insights to a new mechanism of high-order gene amplification in eukaryotes Other Saccharomyces cerevisiae S288C 37.4G Genopole Institut Pasteur
6 ERP009156 ERA398073 ChIP-seq of Abf1, TATA-binding protein, and RNA Polymerase II in wild type and abf1 temperature sensitive mutant yeast (Saccharomyces cerevisiae) Whole Genome Sequencing Saccharomyces cerevisiae S288C 5.2G Wadsworth Center, NY State Dept of Health
7 ERP009777 ERA417204 The complex pattern of epigenomic variation between natural yeast strains at single-nucleosome resolution Whole Genome Sequencing Saccharomyces cerevisiae S288C 42.6G LABORATOIRE DE BIOLOGIE MOLECULAIRE DE LA CELLULE
8 ERP010529 ERA440887 We developed inducible synthetic gene circuits that generate varying degrees of expression stochasticity of an antifungal resistance gene. We initiated laboratory evolutionary experiments by exposing the cells to gradually increasing antifungal stress. From the final day of evolution, we randomly selected 4-4 independently evolved clones, to get an insight into the molecular mechanisms of evolved fluconazole resistance and its dependence on phenotypic heterogeneity. Other Saccharomyces cerevisiae S288C 9.7G iBiMED - Institute of Biomedicine
9 ERP020876 ERA786994 The yeast osmostress response is carbon source dependent Transcriptome Analysis Saccharomyces cerevisiae S288C Chalmers University of Technology, Department of Biology and Biological Engineering
10 ERP021971 ERA846167
ERA886715
ONT_and_MiSeq_sequencing_of_yeast_strains Whole Genome Sequencing Saccharomyces cerevisiae S288C
Saccharomyces cerevisiae SK1
Saccharomyces paradoxus
The Wellcome Trust Sanger Institute
11 ERP106991 ERA1217777 SLIC-CAGE (Super-Low Input Carrier-CAGE) development: comparison with Saccharomyces cerevisiae nAnTi-CAGE and nanoCAGE libraries and validation of SLIC-CAGE on Mus musculus total RNA Transcriptome Analysis Mus musculus
Saccharomyces cerevisiae S288C
Institute of Clinical Sciences, Faculty of Medicine, Imperial College London and MRC London Institute of Medical Sciences,
12 ERP110140 ERA1553140 Analyses of Rad2, Mediator and RNA Polymerase II in different yeast mutant context. Whole Genome Sequencing Saccharomyces cerevisiae S288C Institute for Integrative Biology of the Cell (I2BC), CEA, CNRS, Univ. Paris Sud, University Paris Saclay, F-91198 Gif-sur-Yvette cedex, France;
13 ERP115048 ERA1880959 MNase-Seq of isolated mono-nucleosomes from strains W303 (wild-type) and htz1?. Other Saccharomyces cerevisiae S288C Francis Crick Institute
14 SRP007476 SRA040058 Nucleosomes regulate base-specific mutations in eukaryotes Whole Genome Sequencing Saccharomyces cerevisiae
Saccharomyces cerevisiae S288C
5.8G 2011-07-15 Sun Yat-sen University
15 SRP007842 SRA045006 Nucleosome occupancy dynamics in yeast BY4741 responding to 0.4mM H2O2 over time (0-60 min) Other Saccharomyces cerevisiae S288C 6.1G 2011-08-17 GEO
16 SRP008309 SRA044886 Comprehensive Genome-wide Protein-DNA Interactions Detected at Single Nucleotide Resolution Whole Genome Sequencing Homo sapiens
Saccharomyces cerevisiae S288C
12G 2011-08-11 Pennsylvania State University
17 SRP008736 SRA046756 Cross species differential gene expression Other Saccharomyces cerevisiae S288C
Saccharomyces mikatae IFO 1815
Saccharomyces paradoxus NRRL Y-17217
Saccharomyces uvarum MCYC 623
10.2G 2011-10-06 GEO
18 SRP009377 SRA048128 Decapping of long non-coding RNAs regulates inducible genes Transcriptome Analysis Saccharomyces cerevisiae S288C 7.2G 2011-11-17 Case Western Reserve University
19 SRP009873 SRA048710 GC-Content Normalization for RNA-Seq Data Transcriptome Analysis Saccharomyces cerevisiae S288C 5.3G 2011-12-16 Stanford University
20 SRP010134 SRA046523 Genome-wide structure and organization of eukaryotic pre-initiation complexes Whole Genome Sequencing Saccharomyces cerevisiae S288C 9.1G 2011-10-02 Pennsylvania State University