Search Results ( 63 studies )

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#STUDYSUBMISSIONSTUDY_TITLESTUDY_TYPEORGANISM BASESSUBMITTEDCENTER_NAME
1 DRP004205 DRA005268 Induced genome evolution by transient DNA breaks Other Saccharomyces cerevisiae
Saccharomyces cerevisiae S288C
Saccharomyces cerevisiae SK1
61.1G 2016-10-31 UT-MDSLS
2 DRP005888 DRA007139
DRA008879
Genome-wide identification of genes targeted by RBP1 Other Saccharomyces cerevisiae
Saccharomyces cerevisiae S288C
61G 2018-07-26 TUAGRI
3 ERP000001 ERA000011 Population genomics of domestic and wild yeasts. Whole Genome Sequencing Saccharomyces cerevisiae S288C
Saccharomyces cerevisiae SK1
Saccharomyces cerevisiae W303
Saccharomyces paradoxus Q31.4
Saccharomyces paradoxus Q69.8
Saccharomyces paradoxus Q74.4
Saccharomyces paradoxus W7
Saccharomyces paradoxus Y55
Saccharomyces paradoxus Y8.1
Saccharomyces paradoxus Y8.5
Saccharomyces paradoxus Y9.6
Saccharomyces paradoxus Z1
1.9G SC
4 ERP001366 ERA144667
ERA149937
ERA1824920
ERA189207
ERA191057
ERA222816
ERA227062
ERA229173
ERA247603
ERA283712
ERA326702
ERA330373
ERA337202
ERA352201
ERA356859
ERA401022
ERA402057
ERA409483
ERA420022
ERA428758
ERA434981
ERA484760
ERA486599
Identification_of_mutational_spectra_in_fission_yeast_DNA_repair_and_chromatin_mutants__S_cerevisiae_ Whole Genome Sequencing Achromobacter sp. DRJS3
Alcaligenes sp. DRJS1
Alpheus cf. bouvieri CRH-2008
Alpheus cf. malleator CRH-2008
Ancylobacter aquaticus
Anisakis sp. HC-2005
Anisakis sp. MP-2005
Benthochromis horii
Blastomyces dermatitidis ER-3
Blastomyces gilchristii SLH14081
Candida albicans 1161
Candida tropicalis CBS 94
Cyprichromis coloratus
Homo sapiens
Kluyveromyces marxianus CBS 712
Lachancea thermotolerans CBS 6340
Lactobacillus gasseri MV-22
Linum grandiflorum
Lishizhenia
Mesorhizobium alhagi CCNWXJ12-2
Mesorhizobium robiniae
Mesorhizobium sp. CCNWAX25-1
Mesorhizobium sp. CCNWAX45-1
Mesorhizobium sp. CCNWXJ35-1
Mesorhizobium sp. CCNWYC116
Mesorhizobium sp. CCNWYC131
Millerozyma farinosa CBS 7064
Ogataea polymorpha CBS 4732
Ogataea polymorpha RB11
Pseudomonas sp. DRJS2
Rhizobium sp. CCNWXJ16-1
Rosa clinophylla
Rosa clinophylla var. clinophylla
Rosa clinophylla var. glabra
Saccharomyces cerevisiae
Saccharomyces cerevisiae S288C
Schizosaccharomyces pombe
Trichophyton rubrum CBS 118892
Trichophyton sp. IFM 41172
Uranotaenia unguiculata
Ustilago maydis FB1
Xenotilapia leptura
Xenotilapia melanogenys
Zygosaccharomyces rouxii CBS 732
fungal endophyte sp. D2-12A18-1
1.6T SC
5 ERP006949 ERA358085
ERA466460
ERA484783
ERA486631
ERA525888
ERA526660
ERA528928
ERA532392
ERA535258
ERA546308
ERA552099
ERA707839
PacBio_sequencing_of_yeast_strains Other Saccharomyces cerevisiae
Saccharomyces cerevisiae S288C
Saccharomyces cerevisiae SK1
Saccharomyces paradoxus
78.9G The Wellcome Trust Sanger Institute
6 ERP008906 ERA392218 Macrotene chromosomes provides insights to a new mechanism of high-order gene amplification in eukaryotes Other Saccharomyces cerevisiae S288C 37.4G Genopole Institut Pasteur
7 ERP009156 ERA398073 ChIP-seq of Abf1, TATA-binding protein, and RNA Polymerase II in wild type and abf1 temperature sensitive mutant yeast (Saccharomyces cerevisiae) Whole Genome Sequencing Saccharomyces cerevisiae S288C 5.2G Wadsworth Center, NY State Dept of Health
8 ERP009777 ERA417204 The complex pattern of epigenomic variation between natural yeast strains at single-nucleosome resolution Whole Genome Sequencing Saccharomyces cerevisiae S288C 42.6G LABORATOIRE DE BIOLOGIE MOLECULAIRE DE LA CELLULE
9 ERP010529 ERA440887 We developed inducible synthetic gene circuits that generate varying degrees of expression stochasticity of an antifungal resistance gene. We initiated laboratory evolutionary experiments by exposing the cells to gradually increasing antifungal stress. From the final day of evolution, we randomly selected 4-4 independently evolved clones, to get an insight into the molecular mechanisms of evolved fluconazole resistance and its dependence on phenotypic heterogeneity. Other Saccharomyces cerevisiae S288C 12.4G iBiMED - Institute of Biomedicine
10 ERP020876 ERA786994 The yeast osmostress response is carbon source dependent Transcriptome Analysis Saccharomyces cerevisiae S288C 41.1G Chalmers University of Technology, Department of Biology and Biological Engineering
11 ERP021971 ERA846167
ERA886715
ONT_and_MiSeq_sequencing_of_yeast_strains Whole Genome Sequencing Saccharomyces cerevisiae S288C
Saccharomyces cerevisiae SK1
Saccharomyces paradoxus
6.8G The Wellcome Trust Sanger Institute
12 ERP106991 ERA1217777 SLIC-CAGE (Super-Low Input Carrier-CAGE) development: comparison with Saccharomyces cerevisiae nAnTi-CAGE and nanoCAGE libraries and validation of SLIC-CAGE on Mus musculus total RNA Transcriptome Analysis Mus musculus
Saccharomyces cerevisiae S288C
8.6G Institute of Clinical Sciences, Faculty of Medicine, Imperial College London and MRC London Institute of Medical Sciences,
13 ERP110140 ERA1553140 Analyses of Rad2, Mediator and RNA Polymerase II in different yeast mutant context. Whole Genome Sequencing Saccharomyces cerevisiae S288C 32.1G Institute for Integrative Biology of the Cell (I2BC), CEA, CNRS, Univ. Paris Sud, University Paris Saclay, F-91198 Gif-sur-Yvette cedex, France;
14 ERP115048 ERA1880959 MNase-Seq of isolated mono-nucleosomes from strains W303 (wild-type) and htz1?. Other Saccharomyces cerevisiae S288C 188.2G Francis Crick Institute
15 ERP118673 ERA2300718 Differential efficacies of Cas nucleases on microsatellites involved in human disorders and associated off-target mutations Other Saccharomyces cerevisiae S288C Institut Pasteur
16 ERP119562 ERA2351818 RNAseq analysis of Saccharomyces cerevisiae ethanol fermentation with oxygen sparging during the fermentation phase provided by either microbubbles or regular bubbles Transcriptome Analysis Saccharomyces cerevisiae S288C UNIVERSITY OF SHEFFIELD
17 ERP121621 ERA2583033 ChIP-seq analysis of yeast Ty1 integrase reveal the role of the AC40 interacting domain in the recruitment at both Pol I and Pol III-transcribed genes Whole Genome Sequencing Saccharomyces cerevisiae S288C 3G Institut de Recherche Saint-Louis U944 UMR7212
18 ERP122160 ERA2668119 Sequencing of yeast phosphomutants Other Saccharomyces cerevisiae S288C EMBL-EBI
19 SRP007476 SRA040058 Nucleosomes regulate base-specific mutations in eukaryotes Whole Genome Sequencing Saccharomyces cerevisiae
Saccharomyces cerevisiae S288C
5.8G 2011-07-15 Sun Yat-sen University
20 SRP007842 SRA045006 Nucleosome occupancy dynamics in yeast BY4741 responding to 0.4mM H2O2 over time (0-60 min) Other Saccharomyces cerevisiae S288C 6.1G 2011-08-17 GEO