Search Results ( 17 studies )

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#STUDYSUBMISSIONSTUDY_TITLESTUDY_TYPEORGANISM BASESSUBMITTEDCENTER_NAME
1 SRP004490 SRA026538
SRA191269
Plant genome sequencing data Whole Genome Sequencing Aegilops tauschii
Brassica oleracea var. italica
Cajanus cajan
Lemna gibba
Oryza sativa Indica Group
Oryza sativa Japonica Group
Prunus persica var. persica
Solanum pimpinellifolium
Theobroma cacao
Triticum monococcum
Triticum turgidum subsp. durum
Vitis rotundifolia
4.9T 2010-11-19 CSHL
2 SRP004925 SRA027322
SRA027323
SRA058777
SRA058778
SRA058779
SRA058780
SRA058781
SRA058782
SRA058783
SRA058784
SRA080040
SRA080065
SRA080386
SRA080387
SRA081721
SRA081722
SRA081733
SRA081734
SRA081735
SRA081736
SRA082615
Theobroma cacao Matina 1-6 genome sequencing project Other Theobroma cacao 127.5G 2010-12-16 Indiana University
3 SRP009436 SRA048198 Comparison of Theobroma cacao cultivars: Low coverage WGS approach Other Theobroma cacao
Theobroma grandiflorum
40.1G 2011-11-23 University of British Columbia
4 SRP018696 SRA066232 Transcript profiling of the biotrophic interaction between Theobroma cacao and the fungal pathogen Moniliophthora perniciosa Other Theobroma cacao 96.2G 2013-02-07 BioProject
5 SRP071585 SRA383911 Theobroma cacao Transcriptome or Gene expression Other Theobroma cacao 59.6G BioProject
6 SRP072226 SRA393415 Widespread natural variation of DNA methylation within angiosperms Other Beta vulgaris
Brachypodium distachyon
Brassica rapa
Cannabis sativa
Citrus clementina
Cucumis sativus
Erythranthe guttata
Eucalyptus grandis
Eutrema salsugineum
Fragaria vesca
Lotus japonicus
Malus domestica
Manihot esculenta
Medicago truncatula
Panicum hallii
Panicum virgatum
Populus trichocarpa
Prunus persica
Ricinus communis
Setaria viridis
Sorghum bicolor
Theobroma cacao
Vitis vinifera
347.6G GEO
7 SRP079155 SRA1049119
SRA442822
SRA583719
SRA894359
ARCAD-Comparative population genomics Other Capsicum annuum
Cenchrus americanus
Cenchrus compressus
Cenchrus polystachios
Coffea canephora
Coffea pseudozanguebariae
Digitaria exilis
Dioscorea abyssinica
Dioscorea alata
Dioscorea cayenensis subsp. rotundata
Dioscorea praehensilis
Dioscorea trifida
Elaeis guineensis
Eremopyrum bonaepartis
Herrania nitida
Mauritia flexuosa
Medicago marina
Medicago sativa
Musa acuminata
Musa acuminata subsp. burmannica
Musa acuminata subsp. burmannicoides
Musa acuminata subsp. malaccensis
Musa acuminata subsp. microcarpa
Musa acuminata subsp. siamea
Musa acuminata var. zebrina
Musa balbisiana
Musa banksii
Musa beccarii
Olea europaea subsp. cuspidata
Olea europaea subsp. europaea
Olea europaea var. sylvestris
Phillyrea angustifolia
Phoenix dactylifera
Solanum melongena
Solanum pimpinellifolium
Sorghum bicolor
Sorghum brachypodum
Taeniatherum caput-medusae
Theobroma cacao
Theobroma speciosum
Tricalysia congesta subsp. congesta
Triticum monococcum
Triticum monococcum subsp. aegilopoides
Vitis riparia
Vitis romanetii
Vitis vinifera
Vitis vinifera subsp. sylvestris
[Pennisetum] glaucum subsp. monodii
564.6G BioProject
8 SRP108018 SRA566466
SRA653233
SRA886689
FDA GenomeTrakrCP: cpDNA for botanical product identification Other Allium sativum
Aloysia citrodora
Althaea officinalis
Artemisia annua
Banisteriopsis caapi
Boswellia sacra
Citrus limon
Coffea arabica
Curcuma longa
Digitalis lanata
Dioscorea villosa
Echinacea angustifolia
Echinacea atrorubens
Echinacea laevigata
Echinacea pallida
Echinacea paradoxa
Echinacea purpurea
Echinacea sanguinea
Echinacea speciosa
Echinacea tennesseensis
Eleutherococcus senticosus
Eriobotrya japonica
Fragaria virginiana
Hydrastis canadensis
Illicium anisatum
Illicium floridanum
Illicium henryi
Illicium verum
Jasminum sambac
Jasminum tortuosum
Laurus nobilis
Magnolia biondii
Magnolia denudata
Magnolia officinalis subsp. biloba
Mitragyna speciosa
Pimenta dioica
Piper auritum
Piper nigrum
Prunus dulcis
Scutellaria lateriflora
Theobroma cacao
38G BioProject
9 SRP119502 SRA617723 Small RNA loci annotation in cacao, spinach and carrot Other Daucus carota
Spinacia oleracea
Theobroma cacao
3.6G GEO
10 SRP136974 SRA680264 Theobroma cacao Raw sequence reads Whole Genome Sequencing Theobroma cacao 9.5G BioProject
11 SRP148703 SRA708763
SRA711837
SRA711868
SRA711882
SRA711950
SRA712399
SRA712570
Theobroma cacao isolate:B | cultivar:Pound 7 Genome sequencing and assembly Whole Genome Sequencing Theobroma cacao 188.2G BioProject
12 SRP150924 SRA725307 Resistant and susceptible cacao varieties exhibit defense gene polymorphism and different responses to Phytophthora megakarya inoculation Transcriptome Analysis Theobroma cacao 143.8G GEO
13 SRP163257 SRA788427 Theobroma cacao breed:multiple breeds Genome sequencing Other Theobroma cacao 1.9T BioProject
14 SRP167324 SRA788427 Theobroma cacao reduced representation libraries Other Theobroma cacao 27G BioProject
15 SRP217924 SRA936635 Theobroma cacao Disease Resistance : Discovery and Functional Characterization of Genes Regulating Plant Immunity in Perennial Crops Other Theobroma cacao 1.9T BioProject
16 SRP248100 SRA1035538 Cocoa pod transcriptome analysis Other Theobroma cacao BioProject
17 SRP253670 SRA1058123 Theobroma cacao Raw sequence reads Other Theobroma cacao 61.7G BioProject