Search Results ( 84 studies )

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#STUDYSUBMISSIONSTUDY_TITLESTUDY_TYPEORGANISM BASESSUBMITTEDCENTER_NAME
1 DRP003337 DRA005261
DRA007724
C1 CAGE quantification of single-cell gene expression during TGF-beta stimulation of A549 cells (main timecourse data). Other Homo sapiens
Mus musculus
mixed sample
94.2G 2016-11-11 RIKEN_CLST_DGT
2 SRP046066 SRA181227 Use of chimpanzee RNA as a spike-in standard for human transcriptome analysis Other Homo sapiens
Pan troglodytes
mixed sample
268G BioProject
3 SRP050537 SRA208185
SRA213896
Anopheles coluzzii whole-genome sequence, and multiplexed shotgun genotyping reads of An. coluzzii, An. merus, and backcross progeny Other Anopheles coluzzii
Anopheles merus x Anopheles coluzzii
mixed sample
87.4G BioProject
4 SRP050565 SRA209052
SRA209068
SRA209069
SRA209070
SRA209074
Pooling of different fish and amphibian species Genome sequencing Other Teleostei
mixed sample
5.6G BioProject
5 SRP055456 SRA244008 Double-digest RAD Sequencing using Ion Proton semiconductor platform (ddRADseq-ion) with non-model organisms Other Coregonus lavaretus
Salvelinus alpinus
Zootoca vivipara
mixed sample
73.7G BioProject
6 SRP055839 SRA245462 DNA metabarcoding of insects and allies: An evaluation of primers and pipelines Other mixed sample 327.8M BioProject
7 SRP056667 SRA248941 Homo sapiens fecal metagenome Raw sequence reads Metagenomics human gut metagenome
mixed sample
synthetic construct
13.2G BioProject
8 SRP060223 SRA274837
SRA275245
SRA275247
SRA275248
SRA275249
SRA275250
Transcriptome profiling of wheat glumes in wild emmer, hulled landraces, and modern cultivars Other Triticum dicoccoides
Triticum turgidum subsp. durum
mixed sample
29.8G BioProject
9 SRP061419 SRA275718
SRA770422
Lysiphlebus fabarum Transcriptome or Gene expression Transcriptome Analysis Lysiphlebus fabarum
mixed sample
77G BioProject
10 SRP061993 SRA281781 Transcriptome data from adult Drosophila ananassae and its Wolbachia endosymbiont raw sequence reads Other mixed sample 15.7G BioProject
11 SRP064204 SRA301031 human, salmonella, pseudomonas, staphylococcus, clostridium raw sequence reads Other mixed sample 9G BioProject
12 SRP064913 SRA304507
SRA539272
Library preparation methodology can influence genomic and functional predictions in human microbiome research Metagenomics human gut metagenome
mixed sample
synthetic metagenome
416.5G BioProject
13 SRP067878 SRA323071 High-throughput differential expression profiling of single cells using MASC-seq Other Homo sapiens
Mus musculus
mixed sample
694.6G BioProject
14 SRP071199 SRA378414 Dual RNA-sequencing of host and pathogen during Plasmodium berghei infection of hepatocytes in vitro Other Homo sapiens
Plasmodium berghei
mixed sample
8.4G GEO
15 SRP076629 SRA434235 NADC mock bacterial community Other mixed sample 143M BioProject
16 SRP079117 SRA442765
SRA442793
Ramalina farinacea Metagenome Whole Genome Sequencing Trebouxia asymmetrica
Trebouxia jamesii
Trebouxia sp. TR9
lichen metagenome
mixed sample
BioProject
17 SRP080721 SRA447224 Interaction between the biocontrol agent Lysobacter capsici AZ78 and the phytopathgenic oomycete Phytophthora infestans. Other Lysobacter capsici
Phytophthora infestans
mixed sample
BioProject
18 SRP090003 SRA472787 Mixture of 8 species: Escherichia coli MG1655, Bacteroides caccae ATCC 43185, Bacteroides ovatus ATCC 8483, Bacteroides thetaiotaomicron VPI-5482, Bacteroides vulgatus ATCC 8492, Collinsella aerofaciens ATCC 25986, Clostridium bolteae ATCC BAA-613, a Other mixed sample 13.3G BioProject
19 SRP090474 SRA480119 Swiftia simplex and Primnoa pacifica RAD Sequencing Other mixed sample 17.4G BioProject
20 SRP090676 SRA481114 Compared analysis mRNA expression profiles in Ptychobarbus dipogon and Schizothorax oconnori Other mixed sample 8.6G BioProject