Dataset List

Datasets
Accession Title Dataset type Data objects Policy
JGAD00000000001 whole-exome sequencing data from 97 Japanese lung adenocarcinomapatients Random exome sequencing 191 JGAP00000000002
JGAD00000000002 whole genome data of SCA31 affected sample Whole genome shotgun sequencing 1 JGAP00000000001
JGAD00000000004 Exomes of 23 low-grade gliomas to their recurrences resected up to 11 years later. Random exome sequencing 23 JGAP00000000004
JGAD00000000005 Dataset for gene expression of human Th17 cells before and after activation. Whole genome shotgun sequencing 4 JGAP00000000001
JGAD00000000006 DNA methylation dynamics dataset during early human development. Methylation profiling by high-throughput sequencing 11 JGAP00000000001
JGAD00000000007 Exome data set of Hirschsprung disease Random exome sequencing 11 JGAP00000000001
JGAD00000000008 Exome data set of splenic epidermoid cyst Random chromosome sequencing 8 JGAP00000000001
JGAD00000000009 Whole exome sequences in multiple system atrophy Random exome sequencing 21 JGAP00000000001
JGAD00000000011 transcriptome analysis of coloreclal cancer Transcriptome profiling by high-throughput sequencing 32 JGAP00000000001
JGAD00000000012 Genotype data for Nagahama Cohort Genotyping by array 5259 JGAP00000000001
JGAD00000000013 Whole exome sequence analysis in amyotrophic lateral sclerosis Random exome sequencing 11 JGAP00000000001
JGAD00000000014 Whole exome sequence analysis in monozygotic twins discordant for bipolar disorder Random exome sequencing 6 JGAP00000000001
JGAD00000000015 Sequence analysis at HBV integrants and flanking host genomes Amplicon sequencing 10 JGAP00000000001
JGAD00000000016 Whole exome sequence analysis in hypertension (stage 3) Random exome sequencing 30 JGAP00000000001
JGAD00000000017 Bam files of BM Random exome sequencing 5 JGAP00000000004
JGAD00000000018 An imputation reference panel of Japanese Genotyping by array 0 JGAP00000000001
JGAD00000000021 Comprehensive analysis of PCNSL Random exome sequencing 112 JGAP00000000001
JGAD00000000022 Copy number analysis of ovarian cancer Genotyping by array 114 JGAP00000000004
JGAD00000000023 Whole-exome sequencing of MDS and related myeloid neoplasms Random exome sequencing 28 JGAP00000000004
JGAD00000000024 Exome analysis Random exome sequencing 1 JGAP00000000003
JGAD00000000025 TEST 1 Whole genome shotgun sequencing 22 JGAP00000000001
JGAD00000000026 Human hepatocytes, BS-Seq Methylation profiling by high-throughput sequencing 28 JGAP00000000001
JGAD00000000027 Human hepatocytes, ChIP-Seq Whole genome shotgun sequencing 56 JGAP00000000001
JGAD00000000028 Human hepatocytes, RNA-Seq Transcriptome profiling by high-throughput sequencing 8 JGAP00000000001
JGAD00000000032 Complihensive target re-sequencing of 39 sensorineural hearing loss patients. Amplicon sequencing 47 JGAP00000000001
JGAD00000000035 Exome data set of rheumatoid arthritis Random exome sequencing 39 JGAP00000000001
JGAD00000000036 Whole-exome sequencing of 16 paired tumor and normal samples of RMS and PPB Exome sequencing 51 JGAP00000000004
JGAD00000000037 Exome sequencing of SCLC 51 cases Random exome sequencing 102 JGAP00000000004
JGAD00000000038 Parent-of-origin dependent DNA methylation and gene expression in the human placenta Whole genome sequencing 88 JGAP00000000001
JGAD00000000039 GIST-001 and GIST-002 data Exome sequencing 8 JGAP00000000005
JGAD00000000040 Exome analysis of Japanese aggressive periodontitis patient Exome sequencing 43 JGAP00000000003
JGAD00000000041 Whole exome sequence analysis in alternating hemiplegia of childhood Exome sequencing 11 JGAP00000000001
JGAD00000000042 Brain MRI and CRF from Normal individuals Phenotype information 168 JGAP00000000003
JGAD00000000043 Brain MRI and CRF from Schizophrenia individuals Phenotype information 46 JGAP00000000003
JGAD00000000044 Brain MRI and CRF from Depression individuals Phenotype information 10 JGAP00000000003
JGAD00000000045 Brain MRI and CRF from Bipolar disorder individuals Phenotype information 2 JGAP00000000003
JGAD00000000046 Affymetrix SNP array data for neuroblastoma Genotyping by array 522 JGAP00000000001
JGAD00000000047 Fastq files of ALL RNA-Seq Transcriptome profiling by high-throughput sequencing 116 JGAP00000000004
JGAD00000000051 Dataset of J-ADNI Phenotype information 881 JGAP00000000001
JGAD00000000052 Research of factors related to diagnosis, progression, prognosis and treatment of hepato-biliary-pancreatic malignancies Exome sequencing 117 JGAP00000000004
JGAD00000000053 Transcriptome of HBV positive blood Transcriptome profiling by high-throughput sequencing 8 JGAP00000000001
JGAD00000000054 TEST2 Whole genome sequencing 100 JGAP00000000001
JGAD00000000057 SNP genotyping data of 2 siblings with multiple primary lung cancer Genotyping by array 2 JGAP00000000001
JGAD00000000059 Human non-alcoholic fatty liver disease, RNA-Seq, DNA methylation analysis 60 JGAP00000000001
JGAD00000000060 Human colorectal carcinoma, Whole Exome-Seq Exome sequencing 84 JGAP00000000001
JGAD00000000061 Clinic, genetic and survey dataset Study summary information 0 JGAP00000000001
JGAD00000000062 Exome analysis of 38 Japanese malignant mesothelioma patients Exome sequencing 76 JGAP00000000004
JGAD00000000064 RNA expression profiling of neuromuscular diseases and viral diseases Transcriptome profiling by high-throughput sequencing 12 JGAP00000000001
JGAD00000000065 Amplicon sequencing of lung adenocarcinoma Amplicon sequencing 7 JGAP00000000001
JGAD00000000070 CAGE analysis for non-small cell lung carcinoma Transcriptome profiling by high-throughput sequencing 97 JGAP00000000001
JGAD00000000073 Epigenomic analysis of the human placenta and endometrium constituting the fetal-maternal interface Histone modification profiling by high-throughput sequencing 214 JGAP00000000001
JGAD00000000075 Exome sequencing of cancerous tissues of the primary and recurrence tumors from the same patient with recurrent/metastatic breast cancer Exome sequencing 175 JGAP00000000004
JGAD00000000076 Exome sequencing of cancerous tissues from the patient with ovarian clear cell carcinoma Exome sequencing 110 JGAP00000000004
JGAD00000000077 RNA-seq analysis of BMP-stimulated glioma initiating cells Transcriptome profiling by high-throughput sequencing 4 JGAP00000000001
JGAD00000000078 Normal human absorptive epithelial cells purified from colorectal partial resection specimens, BS-Seq Methylation profiling by high-throughput sequencing 12 JGAP00000000001
JGAD00000000079 Normal human absorptive epithelial cells purified from colorectal partial resection specimens, ChIP-Seq Histone modification profiling by high-throughput sequencing 84 JGAP00000000001
JGAD00000000080 Normal human absorptive epithelial cells purified from colorectal partial resection specimens, RNA-Seq Transcriptome profiling by high-throughput sequencing 12 JGAP00000000001
JGAD00000000085 FPKM 0 JGAP00000000001
JGAD00000000086 Exome sequencing of cancerous tissues of the primary and recurrence tumors from the same patient with recurrent/metastatic gastric cancer Exome sequencing 214 JGAP00000000004
JGAD00000000087 Exome sequencing of cancerous tissues of the primary and recurrence tumors from the same patient with recurrent/metastatic B cell lymphoma. Exome sequencing 70 JGAP00000000004
JGAD00000000088 Pancreatoblastoma 47 JGAP00000000004
JGAD00000000089 Exome sequencing of cancerous tissues, cell lines and CTOS derived from the patient with colorectal, lung and cervical small cell cancer. Exome sequencing 34 JGAP00000000004
JGAD00000000090 Pediatric T-ALL Transcriptome profiling by high-throughput sequencing 123 JGAP00000000001
JGAD00000000091 Exome sequencing of cancerous tissues of the primary and recurrence tumors from the same patient with recurrent/metastatic colorectal cancer Exome sequencing 297 JGAP00000000004
JGAD00000000092 intratumor heterogeneity in colorectal adenoma and carcinoma Exome sequencing 63 JGAP00000000001
JGAD00000000093 POU4F3 mutation screening in Japanese hearing loss patients. 21 JGAP00000000001
JGAD00000000094 Exome analysis in patients with aplastic anemia with uniparental disomy in 6p Exome sequencing 15 JGAP00000000001
JGAD00000000095 Bam and fastq files of TNBC Whole genome sequencing 159 JGAP00000000001
JGAD00000000096 WGS of glioma initiating cells Whole genome sequencing 1 JGAP00000000001
JGAD00000000098 Targeted exome sequencing in patients with primary immunodeficiency disease Exome sequencing 4 JGAP00000000009
JGAD00000000099 mutation analysys of Gorlin syndrome Exome sequencing 5 JGAP00000000001
JGAD00000000101 Covariates Phenotype information 0 JGAP00000000001
JGAD00000000102 Genotype Genotyping by array 0 JGAP00000000001
JGAD00000000104 Amplicon Sequencing of IgVH, IgVK/L, TCRalpha, TCRbeta Amplicon sequencing 240 JGAP00000000001
JGAD00000000105 Transcriptome sequencing Transcriptome profiling by high-throughput sequencing 0 JGAP00000000001
JGAD00000000106 Exome of 32 oligodendroglioma and matched-normal from 16 patients Exome sequencing 96 JGAP00000000004
JGAD00000000107 RNAseq of 27 oligodendroglioma Transcriptome profiling by high-throughput sequencing 54 JGAP00000000004
JGAD00000000108 DNA-methylation array of 30 oligodendroglioma 0 JGAP00000000004
JGAD00000000109 Exome sequencing of cancerous tissues of the primary and recurrence tumors from the same patient with recurrent ovarian cancer Exome sequencing 148 JGAP00000000004
JGAD00000000110 Bam files of JMULK Exome sequencing 86 JGAP00000000003
JGAD00000000111 Fastq files of JMULK Transcriptome profiling by high-throughput sequencing 43 JGAP00000000003
JGAD00000000112 Exome of 17 Diffuse Cerebellar glioma and matched-normal from peripheral blood Exome sequencing 68 JGAP00000000004
JGAD00000000113 RNAseq of 14 Diffuse Cerebellar glioma and 8 Cerebral Glioblastoma Transcriptome profiling by high-throughput sequencing 44 JGAP00000000004
JGAD00000000114 DNA-methylation array of 17 Diffuse Cerebellar glioma and 14 Thalamic glioma 0 JGAP00000000004
JGAD00000000115 Epigenomic analysis of the human placenta 41 JGAP00000000001
JGAD00000000116 Targeted NGS of malignant mesothelioma and WGS of malignant mesothelioma Whole genome sequencing 135 JGAP00000000008
JGAD00000000117 Genome sequencing of biliary tract cancers (Whole Genome Sequencing) Whole genome sequencing 46 JGAP00000000001
JGAD00000000118 Genome sequencing of biliary tract cancers (Exome Sequencing) Exome sequencing 266 JGAP00000000001
JGAD00000000120 genome-wide DNA methylation analysis of panic disorder 0 JGAP00000000001
JGAD00000000121 Epigenomic analysis of human trophoblast stem cells 31 JGAP00000000001
JGAD00000000122 Bam, fastq and array files of CRC 407 JGAP00000000001
JGAD00000000123 BBJ_OE13 Genotyping by array 0 JGAP00000000001
JGAD00000000124 BMI_phenotype Phenotype information 0 JGAP00000000001
JGAD00000000125 Exome of 29 BHD-associated kidney cancer Exome sequencing 44 JGAP00000000004
JGAD00000000129 Transcriptome dataset Transcriptome profiling by high-throughput sequencing 64 JGAP00000000001
JGAD00000000130 intensity data and genotype data (Genome-Wide Human SNP Array 6.0) Genotyping by array 0 JGAP00000000001
JGAD00000000131 intensity data and genotype data (Axiom Genome-Wide ASI 1 Array) Genotyping by array 0 JGAP00000000001
JGAD00000000134 WFS1 mutation screening in Japanese hearing loss patients. 24 JGAP00000000001
JGAD00000000135 CAGE analysis for endometrial carcinoma, and TACC2 isoforms in endometrial carcinoma Transcriptome profiling by high-throughput sequencing 15 JGAP00000000001
JGAD00000000136 Neuronal methylome 0 JGAP00000000001
JGAD00000000137 Genotype count for the NAFLD GWAS 0 JGAP00000000001
JGAD00000000138 Innate myeloid cells in Crohn?s disease Transcriptome profiling by high-throughput sequencing 21 JGAP00000000001
JGAD00000000140 Exome analysis Exome sequencing 3 JGAP00000000001
JGAD00000000142 ChIP-Seq data of CHARGE patient iPSCs derived neuroepithelial cells. Histone modification profiling by high-throughput sequencing 8 JGAP00000000001
JGAD00000000143 Transcriptome analysis of Williams syndrome 14 JGAP00000000003
JGAD00000000144 TC_phenotype Phenotype information 0 JGAP00000000001
JGAD00000000145 HDL-C_phenotype Phenotype information 0 JGAP00000000001
JGAD00000000146 LDL-C_phenotype Phenotype information 0 JGAP00000000001
JGAD00000000147 TG_phenotype Phenotype information 0 JGAP00000000001
JGAD00000000148 BS_phenotype Phenotype information 0 JGAP00000000001
JGAD00000000149 HbA1c_phenotype Phenotype information 0 JGAP00000000001
JGAD00000000150 TP_phenotype Phenotype information 0 JGAP00000000001
JGAD00000000151 Alb_phenotype Phenotype information 0 JGAP00000000001
JGAD00000000152 NAP_phenotype Phenotype information 0 JGAP00000000001
JGAD00000000153 AG_phenotype Phenotype information 0 JGAP00000000001
JGAD00000000154 BUN_phenotype Phenotype information 0 JGAP00000000001
JGAD00000000155 sCr_phenotype Phenotype information 0 JGAP00000000001
JGAD00000000156 eGFR_phenotype Phenotype information 0 JGAP00000000001
JGAD00000000157 UA_phenotype Phenotype information 0 JGAP00000000001
JGAD00000000158 Na_phenotype Phenotype information 0 JGAP00000000001
JGAD00000000159 K_phenotype Phenotype information 0 JGAP00000000001
JGAD00000000160 Cl_phenotype Phenotype information 0 JGAP00000000001
JGAD00000000161 Ca_phenotype Phenotype information 0 JGAP00000000001
JGAD00000000162 P_phenotype Phenotype information 0 JGAP00000000001
JGAD00000000163 TBil_phenotype Phenotype information 0 JGAP00000000001
JGAD00000000164 ZTT_phenotype Phenotype information 0 JGAP00000000001
JGAD00000000165 AST_phenotype Phenotype information 0 JGAP00000000001
JGAD00000000166 ALT_phenotype Phenotype information 0 JGAP00000000001
JGAD00000000167 ALP_phenotype Phenotype information 0 JGAP00000000001
JGAD00000000168 GGT_phenotype Phenotype information 0 JGAP00000000001
JGAD00000000169 APTT_phenotype Phenotype information 0 JGAP00000000001
JGAD00000000170 PT_phenotype Phenotype information 0 JGAP00000000001
JGAD00000000171 Fbg_phenotype Phenotype information 0 JGAP00000000001
JGAD00000000172 CK_phenotype Phenotype information 0 JGAP00000000001
JGAD00000000173 LDH_phenotype Phenotype information 0 JGAP00000000001
JGAD00000000174 CRP_phenotype Phenotype information 0 JGAP00000000001
JGAD00000000175 WBC_phenotype Phenotype information 0 JGAP00000000001
JGAD00000000176 Neutro_phenotype Phenotype information 0 JGAP00000000001
JGAD00000000177 Eosino_phenotype Phenotype information 0 JGAP00000000001
JGAD00000000178 Baso_phenotype Phenotype information 0 JGAP00000000001
JGAD00000000179 Mono_phenotype Phenotype information 0 JGAP00000000001
JGAD00000000180 Lym_phenotype Phenotype information 0 JGAP00000000001
JGAD00000000181 RBC_phenotype Phenotype information 0 JGAP00000000001
JGAD00000000182 Hb_phenotype Phenotype information 0 JGAP00000000001
JGAD00000000183 Ht_phenotype Phenotype information 0 JGAP00000000001
JGAD00000000184 MCV_phenotype Phenotype information 0 JGAP00000000001
JGAD00000000185 MCH_phenotype Phenotype information 0 JGAP00000000001
JGAD00000000186 MCHC_phenotype Phenotype information 0 JGAP00000000001
JGAD00000000187 Plt_phenotype Phenotype information 0 JGAP00000000001
JGAD00000000188 SBP_phenotype Phenotype information 0 JGAP00000000001
JGAD00000000189 DBP_phenotype Phenotype information 0 JGAP00000000001
JGAD00000000190 MAP_phenotype Phenotype information 0 JGAP00000000001
JGAD00000000191 PP_phenotype Phenotype information 0 JGAP00000000001
JGAD00000000192 IVS_phenotype Phenotype information 0 JGAP00000000001
JGAD00000000193 PW_phenotype Phenotype information 0 JGAP00000000001
JGAD00000000194 LVDd_phenotype Phenotype information 0 JGAP00000000001
JGAD00000000195 LVDs_phenotype Phenotype information 0 JGAP00000000001
JGAD00000000196 LVM_phenotype Phenotype information 0 JGAP00000000001
JGAD00000000197 LVMI_phenotype Phenotype information 0 JGAP00000000001
JGAD00000000198 RWT_phenotype Phenotype information 0 JGAP00000000001
JGAD00000000199 FS_phenotype Phenotype information 0 JGAP00000000001
JGAD00000000200 EF_phenotype Phenotype information 0 JGAP00000000001
JGAD00000000201 EA_phenotype Phenotype information 0 JGAP00000000001
JGAD00000000204 Treg cells in head and neck cancer Transcriptome profiling by high-throughput sequencing 15 JGAP00000000001
JGAD00000000205 iPSC from RALD patient Exome sequencing 2 JGAP00000000001
JGAD00000000206 Whole genome sequencing and mutation rate analysis of Vietnamese trios with paternal dioxin exposure Whole genome sequencing 38 JGAP00000000001
JGAD00000000207 Pediatric T-ALL DNA methylation 0 JGAP00000000001
JGAD00000000209 Target sequencing 30835 JGAP00000000001
JGAD00000000210 Amplicon Sequencing of IgVH Amplicon sequencing 120 JGAP00000000001
JGAD00000000213 Re-sequencing of CSAD region in 32 Japanese type 1 diabetes patients 32 JGAP00000000001
JGAD00000000215 Exome of 36 low-grade gliomas and matched-normal from peripheral blood. Exome sequencing 108 JGAP00000000004
JGAD00000000216 RNAseq of 31 low-grade gliomas. Transcriptome profiling by high-throughput sequencing 62 JGAP00000000004
JGAD00000000217 DNA-methylation array of 113 low-grade gliomas. 0 JGAP00000000004
JGAD00000000218 Exome of 8 pair of primary-recurrent gliomas. Exome sequencing 48 JGAP00000000004
JGAD00000000219 RNAseq of 8 recurrent gliomas. Transcriptome profiling by high-throughput sequencing 16 JGAP00000000004
JGAD00000000220 BBJ Whole Genome Sequencing Whole genome sequencing 1026 JGAP00000000001
JGAD00000000223 gene expression of primary renal cell carcinoma Transcriptome profiling by high-throughput sequencing 43 JGAP00000000008
JGAD00000000224 gene expression of metastasis rena lcell carcinoma Transcriptome profiling by high-throughput sequencing 21 JGAP00000000008
JGAD00000000225 gene expression of metastasis renal cell carcinoma_2 Transcriptome profiling by high-throughput sequencing 3 JGAP00000000008
JGAD00000000226 Genetic and transcriptional landscape of plasma cells in POEMS syndrome 76 JGAP00000000001
JGAD00000000228 Whole Genome Sequencing analysis of Japanese liver cancer (WGS) Whole genome sequencing 590 JGAP00000000001
JGAD00000000229 Whole Genome Sequencing analysis of Japanese liver cancer (RNA-Seq) Transcriptome profiling by high-throughput sequencing 439 JGAP00000000001
JGAD00000000231 Gene expression analysis for nasal polyps 0 JGAP00000000001
JGAD00000000233 Whole genome sequencing analysis of esophageal squamous cell carcinoma Whole genome sequencing 44 JGAP00000000001
JGAD00000000236 Exome sequencing of cancerous tissues of the primary tumors from the patient with corolectal cancer Exome sequencing 116 JGAP00000000001
JGAD00000000237 3.5KJPNv2, an allele frequency panel of 3,552 Japanese individuals. The un-restricted access data ?hum0015.v3.3.5kjpnv2.v1? are available at the NBDC site https://humandbs.biosciencedbc.jp/en/hum0015-v3. This study does not contain any controlled-access dataset. Genomic variant calling 0 JGAP00000000001
JGAD00000000238 Summary statistics of GWASs of Japanese skin type in Japanese population Study summary information 0 JGAP00000000001
JGAD00000000240 Bam of familial MDS, Two patients Exome sequencing 4 JGAP00000000001
JGAD00000000242 Fastq of Todai OncoPanel 801 JGAP00000000001
JGAD00000000244 OTOF mutation screening in Japanese hearing loss patients. 42 JGAP00000000001
JGAD00000000247 Exome bam files of uterine adenomyosis 229 JGAP00000000001
JGAD00000000249 C-MACH RRBS 40 JGAP00000000001
JGAD00000000250 Exome/Target capture sequencing of uterine and ovarian carcinosarcoma 428 JGAP00000000001
JGAD00000000254 Exome sequencing of endometrial hyperplasia and carcinoma. 187 JGAP00000000001
JGAD00000000257 Whole exome sequencing and RNA Sequencing data from Dedifferentiated liposarcoma. 92 JGAP00000000001
JGAD00000000258 Whole exome sequencing and RNA Sequencing data from Tenosynovial giant cell tumor. 106 JGAP00000000001
JGAD00000000259 Bam, somatic mutation and CNV files of primary central nervous system lymphoma 7 JGAP00000000001
JGAD00000000260 Bam and fastq files of OCUM-8 and OCUM-9 4 JGAP00000000001
JGAD00000000261 Genomic DNA from whole blood of human sample RK067 Whole genome sequencing 1 JGAP00000000001
JGAD00000000263 RNA-seq analysis of BMP-stimulated glioma initiating cells Transcriptome profiling by high-throughput sequencing 6 JGAP00000000001
JGAD00000000264 Multi?institutional study on molcular pathogenesis of bone and soft tissue tumors by genome and proteome analyses 106 JGAP00000000001
JGAD00000000272 Target capture sequencing data from two ROS1-rearranged cancer patients 2 JGAP00000000001
JGAD00000000274 CLDN14 mutation identifed from Japanese sensorineural hearing loss patient. 1 JGAP00000000001
JGAD00000000275 Mutational Spectrums and Clinical Features of Patients with LOXHD1 Variants Identified in a 8,074 Hearing Loss Patient Cohort. 28 JGAP00000000001
JGAD00000000277 Viral integration analysis of hepatocellular carcinoma using virus capture sequence. 373 JGAP00000000001
JGAD00000000288 Target sequencing 20002 JGAP00000000001
JGAD00000000290 Metagenome shotgun sequencing of Japanese population Whole genome sequencing 95 JGAP00000000001
JGAD00000000292 Methylome and transcriptome profiling of CHM-derived TS cells 8 JGAP00000000001