Study: JGAS00000000060

Identifier

AccessionJGAS00000000060

Description

TitleInvestigating genomic intratumor heterogeneity in colorectal carcinoma
AbstractTo investigateintertumor heterogeneity of colorecatal carcinoma, we profiled the genome and epigenome in multiple regions within each of nine colorectal tumors.
Study Type 1
Study TypeCase-Control
Study Type 2
Study TypeCase Set
Study Type 3
Study TypeTumor vs. Matched-Normal

Grant

Grant 1
TitleCREST
AgencyJapan Science and Technology (JST)
Grant ID25861199
Grant 2
TitleSupercomputational Life Science
AgencyThe MEXT Strategic Programs on Innovative Research ()
Grant ID

Publication

PubMed ID26890883
Publication Statuspublished
DB TypePUBMED

Study Attribute

NBDC Numberhum0066
Registration date2016-07-08
Submitting organizationKyushu University
Principal InvestigatorUchi Ryutaro
Molecular Data TypeWhole Exome Sequencing
PlatformHiseq2000
VendorIllumina
Comment
Primary PhenotypeCancer
PhenotypeColorectal Carcinoma
Study Inclusion/Exclusion CriteriaPatients who underwent radical resection of primary and/or liver metastatic tumors at Kyushu University Beppu Hospital, Kyushu University Hospital and Osaka University Hospital.
Disease TypeNeoplasms
Disease TypeColorectal Carcinoma
MethodsExome sequencing
SamplingMultiregional samplig
Dataset
Accession Title Dataset type Data objects Policy
JGAD00000000060 Human colorectal carcinoma, Whole Exome-Seq Exome sequencing 84 JGAP00000000001