Study: JGAS00000000107

Identifier

AccessionJGAS00000000107

Description

TitleEpigenomic analysis of the human placenta and endometrium constituting the fetal-maternal interface
AbstractThis study aims to determine the reference epigenomes of the human placenta and endometrium, which constitute the fetal-meternal interface, for future use in studies of human diseases associated with reproduction and development. In the placenta, we focus on cytotrophoblast and syncytiotrophoblast cells (both at first trimester and at term) and, in the endometrium, we focus on epitherial cells (at the follicular and secretory phases) and stroma cells. These reference epigenomic data will be of valuable resource in studying disease-associated differences in epigenomic modification in the reproductive system.
Study Type 1
Study TypeTranscriptome Sequencing
Study Type 2
Study TypeOther
New Study TypeBisulfite Sequencing, Chip-seq

Grant

TitleCore Research for Evolutional Science and Technology (CREST)
AgencyJapan Agency for Medical Research and Development (AMED)
Grant ID

Publication

PubMed ID29249463
Publication Statuspublished
DB TypePUBMED

Study Link

Study Link 1
URL Linkhttp://ihec-epigenomes.net/
Study Link 2
URL Linkhttp://crest-ihec.jp/english/index.html

Study Attribute

NBDC Numberhum0086
Registration date2017-05-30
Submitting organizationDepartment of Informative Genetics, Environment and Genome Research Center, Tohoku University Graduate School of Medicine
Principal InvestigatorTakahiro Arima
Molecular Data TypeTranscriptome Sequencing
PlatformHiSeq 2500
VendorIllumina
Comment
Molecular Data TypeBisulfite Sequencing
PlatformHiSeq 1500
VendorIllumina
Comment
Molecular Data TypeChIP-seq
PlatformHiSeq 2500
VendorIllumina
Comment
Primary PhenotypeNormal/none
ProjectInternational Human Epigenome Consortium (IHEC)
Dataset
Accession Title Dataset type Data objects Policy
JGAD00000000115 Epigenomic analysis of the human placenta 41 JGAP00000000001