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<STUDY_SET>
    <STUDY accession="DRP000014" center_name="UT-MGS" alias="DRP000014">
        <IDENTIFIERS>
            <PRIMARY_ID label="BioProject ID">PRJDA34559</PRIMARY_ID>
        </IDENTIFIERS>
        <DESCRIPTOR>
            <STUDY_TITLE>Comprehensive analysis of polysomal mRNAs in HT29 cell.</STUDY_TITLE>
            <STUDY_TYPE existing_study_type="Transcriptome Analysis"/>
            <STUDY_ABSTRACT>Expression profile in HT29 cell exposed to ER stress was attempted. We used            shotgun sequencing method, in which next gene sequencing technology and polysome            analysis were combined.</STUDY_ABSTRACT>
            <CENTER_PROJECT_NAME>Integrateve Transcriptome Analysis</CENTER_PROJECT_NAME>
            <RELATED_STUDIES>
                <RELATED_STUDY>
                    <RELATED_LINK>
                        <DB>bioproject</DB>
                        <ID>PRJDA34559</ID>
                        <LABEL>PRJDA34559</LABEL>
                    </RELATED_LINK>
                    <IS_PRIMARY>true</IS_PRIMARY>
                </RELATED_STUDY>
                <RELATED_STUDY>
                    <RELATED_LINK>
                        <DB>genomeprj</DB>
                        <ID>34559</ID>
                        <LABEL>34559</LABEL>
                    </RELATED_LINK>
                    <IS_PRIMARY>false</IS_PRIMARY>
                </RELATED_STUDY>
            </RELATED_STUDIES>
            <STUDY_DESCRIPTION>We analyzed the mRNA profile in cytoplasm and in polysome during the            endoplasmic reticulum (ER) stress using second generation sequencers. We compared three            time points (0 hr/untreatment control, 4 hr and 16 hr after treatment with 2 ??g/mL ER            stress inducible agent Tunicamycin (Tm)). This is the first time mRNA in ???polysome??? is            analyzed using the next generation sequencers and compared with that of cytoplasm.</STUDY_DESCRIPTION>
        </DESCRIPTOR>
        <STUDY_LINKS>
            <STUDY_LINK>
                <XREF_LINK>
                    <DB>pubmed</DB>
                    <ID>22465528</ID>
                </XREF_LINK>
            </STUDY_LINK>
        </STUDY_LINKS>
    </STUDY>
</STUDY_SET>
