PRJDB2466 Genome-wide maps of H3K4me3 in 3T3-L1 adipocytes (on day 8 of differentiation) using ChIP with high-throughput sequencing (ChIP-seq). source:3T3-L1 cells, day 8 of differentiation. High-throughput sequencing was performed by using the Genome Analyzer System (GA IIx) (Illumina) . In short, we repaired ends of DNA samples, created 3'-dA overhang, ligated Illumina adaptors, size-fractioned the samples by gel extraction and amplified them with 8 cycles of PCR according to the manufacturer's instructions. We then purified the DNA and performed cluster generation and 36 cycles of sequencing on an Illumina cluster station and 1G analyzer following the manufacturer's instructions. Sequences were mapped to the reference murine genome, NCBI build 37 (mm9) using ELAND algorithm(GAPipeline-1.4.0). Peak detection was performed using Findpeaks 3.1.9.2 with a false discovery rate (FDR) cut-off of 1x10-4. 0 NIL Findpeaks 3.1.9.2 PRJDB2466 Genome-wide maps of CTCF binding sites in 3T3-L1 adipocytes (on day 0 of differentiation) using ChIP with high-throughput sequencing (ChIP-seq). source:3T3-L1 cells, day 0 of differentiation. High-throughput sequencing was performed by using the Genome Analyzer System (GA IIx) (Illumina) . In short, we repaired ends of DNA samples, created 3'-dA overhang, ligated Illumina adaptors, size-fractioned the samples by gel extraction and amplified them with 8 cycles of PCR according to the manufacturer's instructions. We then purified the DNA and performed cluster generation and 36 cycles of sequencing on an Illumina cluster station and 1G analyzer following the manufacturer's instructions. Sequences were mapped to the reference murine genome, NCBI build 37 (mm9) using ELAND algorithm(GAPipeline-1.4.0). Peak detection was performed using Findpeaks 3.1.9.2 with a false discovery rate (FDR) cut-off of 1x10-4. 0 NIL Findpeaks 3.1.9.2 PRJDB2466 Genome-wide maps of RXRa binding sites in 3T3-L1 adipocytes (on day 8 of differentiation) using ChIP with high-throughput sequencing (ChIP-seq). source:3T3-L1 cells, day 8 of differentiation. High-throughput sequencing was performed by using the Genome Analyzer System (GA IIx) (Illumina) . In short, we repaired ends of DNA samples, created 3'-dA overhang, ligated Illumina adaptors, size-fractioned the samples by gel extraction and amplified them with 8 cycles of PCR according to the manufacturer's instructions. We then purified the DNA and performed cluster generation and 36 cycles of sequencing on an Illumina cluster station and 1G analyzer following the manufacturer's instructions. Sequences were mapped to the reference murine genome, NCBI build 37 (mm9) using ELAND algorithm(GAPipeline-1.4.0). Peak detection was performed using Findpeaks 3.1.9.2 with a false discovery rate (FDR) cut-off of 1x10-4. 0 NIL Findpeaks 3.1.9.2 PRJDB2466 Genome-wide maps of PPARg binding sites in 3T3-L1 adipocytes (on 36 hours of differentiation) using ChIP with high-throughput sequencing (ChIP-seq). source:3T3-L1 cells, 36h of differentiation. High-throughput sequencing was performed by using the Genome Analyzer System (GA IIx) (Illumina) . In short, we repaired ends of DNA samples, created 3'-dA overhang, ligated Illumina adaptors, size-fractioned the samples by gel extraction and amplified them with 8 cycles of PCR according to the manufacturer's instructions. We then purified the DNA and performed cluster generation and 36 cycles of sequencing on an Illumina cluster station and 1G analyzer following the manufacturer's instructions. Sequences were mapped to the reference murine genome, NCBI build 37 (mm9) using ELAND algorithm(GAPipeline-1.4.0). Peak detection was performed using Findpeaks 3.1.9.2 with a false discovery rate (FDR) cut-off of 1x10-4. 0 NIL Findpeaks 3.1.9.2 PRJDB2467 Genome-wide maps of open chromatin sites in 3T3-L1 adipocytes (on day 8 of differentiation) using formaldehyde-assisted isolation of regulatory elements coupled with high-throughput sequencing (FAIRE-seq). source:3T3-L1 cells, day 8 of differentiation. High-throughput sequencing was performed by using the Genome Analyzer System (GA IIx) (Illumina) . In short, we repaired ends of DNA samples, created 3'-dA overhang, ligated Illumina adaptors, size-fractioned the samples by gel extraction and amplified them with 8 cycles of PCR according to the manufacturer's instructions. We then purified the DNA and performed cluster generation and 36 cycles of sequencing on an Illumina cluster station and 1G analyzer following the manufacturer's instructions. Sequences were mapped to the reference murine genome, NCBI build 37 (mm9) using ELAND algorithm(GAPipeline-1.4.0). Peak detection was performed using Findpeaks 3.1.9.2 with a false discovery rate (FDR) cut-off of 1x10-4. 0 NIL Findpeaks 3.1.9.2 PRJDB2466 Genome-wide maps of RXRa binding sites in 3T3-L1 adipocytes (on 36 hours of differentiation) using ChIP with high-throughput sequencing (ChIP-seq). source:3T3-L1 cells, 36h of differentiation. High-throughput sequencing was performed by using the Genome Analyzer System (GA IIx) (Illumina) . In short, we repaired ends of DNA samples, created 3'-dA overhang, ligated Illumina adaptors, size-fractioned the samples by gel extraction and amplified them with 8 cycles of PCR according to the manufacturer's instructions. We then purified the DNA and performed cluster generation and 36 cycles of sequencing on an Illumina cluster station and 1G analyzer following the manufacturer's instructions. Sequences were mapped to the reference murine genome, NCBI build 37 (mm9) using ELAND algorithm(GAPipeline-1.4.0). Peak detection was performed using Findpeaks 3.1.9.2 with a false discovery rate (FDR) cut-off of 1x10-4. 0 NIL Findpeaks 3.1.9.2 PRJDB2466 Genome-wide maps of PPARg binding sites in 3T3-L1 adipocytes (on day 8 of differentiation) using ChIP with high-throughput sequencing (ChIP-seq). source:3T3-L1 cells, day 8 of differentiation. High-throughput sequencing was performed by using the Genome Analyzer System (GA IIx) (Illumina) . In short, we repaired ends of DNA samples, created 3'-dA overhang, ligated Illumina adaptors, size-fractioned the samples by gel extraction and amplified them with 8 cycles of PCR according to the manufacturer's instructions. We then purified the DNA and performed cluster generation and 36 cycles of sequencing on an Illumina cluster station and 1G analyzer following the manufacturer's instructions. Sequences were mapped to the reference murine genome, NCBI build 37 (mm9) using ELAND algorithm(GAPipeline-1.4.0). Peak detection was performed using Findpeaks 3.1.9.2 with a false discovery rate (FDR) cut-off of 1x10-4. 0 NIL Findpeaks 3.1.9.2 PRJDB2466 Genome-wide maps of H3K4me3 in 3T3-L1 adipocytes (on day 0 of differentiation) using ChIP with high-throughput sequencing (ChIP-seq). source:3T3-L1 cells, day 0 of differentiation. High-throughput sequencing was performed by using the Genome Analyzer System (GA IIx) (Illumina) . In short, we repaired ends of DNA samples, created 3'-dA overhang, ligated Illumina adaptors, size-fractioned the samples by gel extraction and amplified them with 8 cycles of PCR according to the manufacturer's instructions. We then purified the DNA and performed cluster generation and 36 cycles of sequencing on an Illumina cluster station and 1G analyzer following the manufacturer's instructions. Sequences were mapped to the reference murine genome, NCBI build 37 (mm9) using ELAND algorithm(GAPipeline-1.4.0). Peak detection was performed using Findpeaks 3.1.9.2 with a false discovery rate (FDR) cut-off of 1x10-4. 0 NIL Findpeaks 3.1.9.2 PRJDB2467 Genome-wide maps of open chromatin sites in 3T3-L1 fibroblasts (on day 0 of differentiation) using formaldehyde-assisted isolation of regulatory elements coupled with high-throughput sequencing (FAIRE-seq). source:3T3-L1 cells, day 0 of differentiation. High-throughput sequencing was performed by using the Genome Analyzer System (GA IIx) (Illumina) . In short, we repaired ends of DNA samples, created 3'-dA overhang, ligated Illumina adaptors, size-fractioned the samples by gel extraction and amplified them with 8 cycles of PCR according to the manufacturer's instructions. We then purified the DNA and performed cluster generation and 36 cycles of sequencing on an Illumina cluster station and 1G analyzer following the manufacturer's instructions. Sequences were mapped to the reference murine genome, NCBI build 37 (mm9) using ELAND algorithm(GAPipeline-1.4.0). Peak detection was performed using Findpeaks 3.1.9.2 with a false discovery rate (FDR) cut-off of 1x10-4. 0 NIL Findpeaks 3.1.9.2 PRJDB2467 Genome-wide maps of open chromatin sites in NIH3T3 fibroblasts using formaldehyde-assisted isolation of regulatory elements coupled with high-throughput sequencing (FAIRE-seq). source:NIH-3T3 cells. High-throughput sequencing was performed by using the Genome Analyzer System (GA IIx) (Illumina) . In short, we repaired ends of DNA samples, created 3'-dA overhang, ligated Illumina adaptors, size-fractioned the samples by gel extraction and amplified them with 8 cycles of PCR according to the manufacturer's instructions. We then purified the DNA and performed cluster generation and 36 cycles of sequencing on an Illumina cluster station and 1G analyzer following the manufacturer's instructions. Sequences were mapped to the reference murine genome, NCBI build 37 (mm9) using ELAND algorithm(GAPipeline-1.4.0). Peak detection was performed using Findpeaks 3.1.9.2 with a false discovery rate (FDR) cut-off of 1x10-4. 0 NIL Findpeaks 3.1.9.2 PRJDB2466 Genome-wide maps of CTCF binding sites in 3T3-L1 adipocytes (on day 8 of differentiation) using ChIP with high-throughput sequencing (ChIP-seq). source:3T3-L1 cells, day 8 of differentiation. High-throughput sequencing was performed by using the Genome Analyzer System (GA IIx) (Illumina) . In short, we repaired ends of DNA samples, created 3'-dA overhang, ligated Illumina adaptors, size-fractioned the samples by gel extraction and amplified them with 8 cycles of PCR according to the manufacturer's instructions. We then purified the DNA and performed cluster generation and 36 cycles of sequencing on an Illumina cluster station and 1G analyzer following the manufacturer's instructions. Sequences were mapped to the reference murine genome, NCBI build 37 (mm9) using ELAND algorithm(GAPipeline-1.4.0). Peak detection was performed using Findpeaks 3.1.9.2 with a false discovery rate (FDR) cut-off of 1x10-4. 0 NIL Findpeaks 3.1.9.2