<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<EXPERIMENT_SET>
    <EXPERIMENT alias="DRX000719" center_name="ERATO" accession="DRX000719">
        <TITLE>test1</TITLE>
        <STUDY_REF refname="DRP000407" refcenter="ERATO" accession="DRP000407">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB2792</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>Test sample to verify the method. RNA sample isolated from a mixture of gametophores, protonemata and rhizoids</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS000704" refcenter="ERATO" accession="DRS000704">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00016387</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>test1</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>other</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>Described in PMID: 22574165, PMCID: PMC3344888 PLoS One. 2012;7(5):e36471. doi: 10.1371/journal.pone.0036471. http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0036471</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>25</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ABI_SOLID>
                <INSTRUMENT_MODEL>AB SOLiD System 2.0</INSTRUMENT_MODEL>
            </ABI_SOLID>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX></STEP_INDEX>
                    <PREV_STEP_INDEX></PREV_STEP_INDEX>
                    <PROGRAM>SAT2</PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX000720" center_name="ERATO" accession="DRX000720">
        <TITLE>test2</TITLE>
        <STUDY_REF refname="DRP000407" refcenter="ERATO" accession="DRP000407">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB2792</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>Test sample to verify the method. RNA sample isolated from a mixture of gametophores, protonemata and rhizoids</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS000704" refcenter="ERATO" accession="DRS000704">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00016387</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>test2</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>other</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>Described in PMID: 22574165, PMCID: PMC3344888 PLoS One. 2012;7(5):e36471. doi: 10.1371/journal.pone.0036471. http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0036471</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>25</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ABI_SOLID>
                <INSTRUMENT_MODEL>AB SOLiD System 2.0</INSTRUMENT_MODEL>
            </ABI_SOLID>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX></STEP_INDEX>
                    <PREV_STEP_INDEX></PREV_STEP_INDEX>
                    <PROGRAM>SAT2</PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX000721" center_name="ERATO" accession="DRX000721">
        <TITLE>Rep1_0h</TITLE>
        <STUDY_REF refname="DRP000407" refcenter="ERATO" accession="DRP000407">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB2792</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>Dissected leaves collected 0 h after dissection with a homogenizer, in the reprogramming experiment 1.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS000704" refcenter="ERATO" accession="DRS000704">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00016387</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>Rep1_0h</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>other</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>Described in PMID: 22574165, PMCID: PMC3344888 PLoS One. 2012;7(5):e36471. doi: 10.1371/journal.pone.0036471. http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0036471</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>25</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ABI_SOLID>
                <INSTRUMENT_MODEL>AB SOLiD System 2.0</INSTRUMENT_MODEL>
            </ABI_SOLID>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX></STEP_INDEX>
                    <PREV_STEP_INDEX></PREV_STEP_INDEX>
                    <PROGRAM>SAT2</PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX000722" center_name="ERATO" accession="DRX000722">
        <TITLE>Rep1_1h</TITLE>
        <STUDY_REF refname="DRP000407" refcenter="ERATO" accession="DRP000407">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB2792</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>Dissected leaves collected 1 h after dissection with a homogenizer, in the reprogramming experiment 1.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS000704" refcenter="ERATO" accession="DRS000704">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00016387</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>Rep1_1h</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>other</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>Described in PMID: 22574165, PMCID: PMC3344888 PLoS One. 2012;7(5):e36471. doi: 10.1371/journal.pone.0036471. http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0036471</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>25</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ABI_SOLID>
                <INSTRUMENT_MODEL>AB SOLiD System 2.0</INSTRUMENT_MODEL>
            </ABI_SOLID>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX></STEP_INDEX>
                    <PREV_STEP_INDEX></PREV_STEP_INDEX>
                    <PROGRAM>SAT2</PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX000723" center_name="ERATO" accession="DRX000723">
        <TITLE>Rep1_3h</TITLE>
        <STUDY_REF refname="DRP000407" refcenter="ERATO" accession="DRP000407">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB2792</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>Dissected leaves collected 3 h after dissection with a homogenizer, in the reprogramming experiment 1.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS000704" refcenter="ERATO" accession="DRS000704">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00016387</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>Rep1_3h</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>other</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>Described in PMID: 22574165, PMCID: PMC3344888 PLoS One. 2012;7(5):e36471. doi: 10.1371/journal.pone.0036471. http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0036471</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>25</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ABI_SOLID>
                <INSTRUMENT_MODEL>AB SOLiD System 2.0</INSTRUMENT_MODEL>
            </ABI_SOLID>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX></STEP_INDEX>
                    <PREV_STEP_INDEX></PREV_STEP_INDEX>
                    <PROGRAM>SAT2</PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX000724" center_name="ERATO" accession="DRX000724">
        <TITLE>Rep1_6h</TITLE>
        <STUDY_REF refname="DRP000407" refcenter="ERATO" accession="DRP000407">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB2792</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>Dissected leaves collected 6 h after dissection with a homogenizer, in the reprogramming experiment 1.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS000704" refcenter="ERATO" accession="DRS000704">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00016387</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>Rep1_6h</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>other</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>Described in PMID: 22574165, PMCID: PMC3344888 PLoS One. 2012;7(5):e36471. doi: 10.1371/journal.pone.0036471. http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0036471</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>25</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ABI_SOLID>
                <INSTRUMENT_MODEL>AB SOLiD System 2.0</INSTRUMENT_MODEL>
            </ABI_SOLID>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX></STEP_INDEX>
                    <PREV_STEP_INDEX></PREV_STEP_INDEX>
                    <PROGRAM>SAT2</PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX000725" center_name="ERATO" accession="DRX000725">
        <TITLE>Rep1_12h</TITLE>
        <STUDY_REF refname="DRP000407" refcenter="ERATO" accession="DRP000407">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB2792</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>Dissected leaves collected 12 h after dissection with a homogenizer, in the reprogramming experiment 1.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS000704" refcenter="ERATO" accession="DRS000704">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00016387</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>Rep1_12h</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>other</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>Described in PMID: 22574165, PMCID: PMC3344888 PLoS One. 2012;7(5):e36471. doi: 10.1371/journal.pone.0036471. http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0036471</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>25</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ABI_SOLID>
                <INSTRUMENT_MODEL>AB SOLiD System 2.0</INSTRUMENT_MODEL>
            </ABI_SOLID>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX></STEP_INDEX>
                    <PREV_STEP_INDEX></PREV_STEP_INDEX>
                    <PROGRAM>SAT2</PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX000726" center_name="ERATO" accession="DRX000726">
        <TITLE>Rep1_24h</TITLE>
        <STUDY_REF refname="DRP000407" refcenter="ERATO" accession="DRP000407">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB2792</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>Dissected leaves collected 24 h after dissection with a homogenizer, in the reprogramming experiment 1.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS000704" refcenter="ERATO" accession="DRS000704">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00016387</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>Rep1_24h</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>other</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>Described in PMID: 22574165, PMCID: PMC3344888 PLoS One. 2012;7(5):e36471. doi: 10.1371/journal.pone.0036471. http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0036471</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>25</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ABI_SOLID>
                <INSTRUMENT_MODEL>AB SOLiD System 2.0</INSTRUMENT_MODEL>
            </ABI_SOLID>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX></STEP_INDEX>
                    <PREV_STEP_INDEX></PREV_STEP_INDEX>
                    <PROGRAM>SAT2</PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX000727" center_name="ERATO" accession="DRX000727">
        <TITLE>Rep2_0h</TITLE>
        <STUDY_REF refname="DRP000407" refcenter="ERATO" accession="DRP000407">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB2792</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>Dissected leaves collected 0 h after dissection with a homogenizer, in the reprogramming experiment 2.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS000704" refcenter="ERATO" accession="DRS000704">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00016387</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>Rep2_0h</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>other</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>Described in PMID: 22574165, PMCID: PMC3344888 PLoS One. 2012;7(5):e36471. doi: 10.1371/journal.pone.0036471. http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0036471</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>25</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ABI_SOLID>
                <INSTRUMENT_MODEL>AB SOLiD System 2.0</INSTRUMENT_MODEL>
            </ABI_SOLID>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX></STEP_INDEX>
                    <PREV_STEP_INDEX></PREV_STEP_INDEX>
                    <PROGRAM>SAT2</PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX000728" center_name="ERATO" accession="DRX000728">
        <TITLE>Rep2_1h</TITLE>
        <STUDY_REF refname="DRP000407" refcenter="ERATO" accession="DRP000407">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB2792</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>Dissected leaves collected 1 h after dissection with a homogenizer, in the reprogramming experiment 2.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS000704" refcenter="ERATO" accession="DRS000704">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00016387</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>Rep2_1h</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>other</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>Described in PMID: 22574165, PMCID: PMC3344888 PLoS One. 2012;7(5):e36471. doi: 10.1371/journal.pone.0036471. http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0036471</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>25</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ABI_SOLID>
                <INSTRUMENT_MODEL>AB SOLiD System 2.0</INSTRUMENT_MODEL>
            </ABI_SOLID>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX></STEP_INDEX>
                    <PREV_STEP_INDEX></PREV_STEP_INDEX>
                    <PROGRAM>SAT2</PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX000729" center_name="ERATO" accession="DRX000729">
        <TITLE>Rep2_3h</TITLE>
        <STUDY_REF refname="DRP000407" refcenter="ERATO" accession="DRP000407">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB2792</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>Dissected leaves collected 3 h after dissection with a homogenizer, in the reprogramming experiment 2.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS000704" refcenter="ERATO" accession="DRS000704">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00016387</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>Rep2_3h</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>other</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>Described in PMID: 22574165, PMCID: PMC3344888 PLoS One. 2012;7(5):e36471. doi: 10.1371/journal.pone.0036471. http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0036471</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>25</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ABI_SOLID>
                <INSTRUMENT_MODEL>AB SOLiD System 2.0</INSTRUMENT_MODEL>
            </ABI_SOLID>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX></STEP_INDEX>
                    <PREV_STEP_INDEX></PREV_STEP_INDEX>
                    <PROGRAM>SAT2</PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX000730" center_name="ERATO" accession="DRX000730">
        <TITLE>Rep2_6h</TITLE>
        <STUDY_REF refname="DRP000407" refcenter="ERATO" accession="DRP000407">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB2792</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>Dissected leaves collected 6 h after dissection with a homogenizer, in the reprogramming experiment 2.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS000704" refcenter="ERATO" accession="DRS000704">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00016387</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>Rep2_6h</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>other</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>Described in PMID: 22574165, PMCID: PMC3344888 PLoS One. 2012;7(5):e36471. doi: 10.1371/journal.pone.0036471. http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0036471</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>25</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ABI_SOLID>
                <INSTRUMENT_MODEL>AB SOLiD System 2.0</INSTRUMENT_MODEL>
            </ABI_SOLID>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX></STEP_INDEX>
                    <PREV_STEP_INDEX></PREV_STEP_INDEX>
                    <PROGRAM>SAT2</PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX000731" center_name="ERATO" accession="DRX000731">
        <TITLE>Rep2_12h</TITLE>
        <STUDY_REF refname="DRP000407" refcenter="ERATO" accession="DRP000407">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB2792</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>Dissected leaves collected 12 h after dissection with a homogenizer, in the reprogramming experiment 2.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS000704" refcenter="ERATO" accession="DRS000704">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00016387</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>Rep2_12h</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>other</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>Described in PMID: 22574165, PMCID: PMC3344888 PLoS One. 2012;7(5):e36471. doi: 10.1371/journal.pone.0036471. http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0036471</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>25</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ABI_SOLID>
                <INSTRUMENT_MODEL>AB SOLiD System 2.0</INSTRUMENT_MODEL>
            </ABI_SOLID>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX></STEP_INDEX>
                    <PREV_STEP_INDEX></PREV_STEP_INDEX>
                    <PROGRAM>SAT2</PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX000732" center_name="ERATO" accession="DRX000732">
        <TITLE>Rep2_24h</TITLE>
        <STUDY_REF refname="DRP000407" refcenter="ERATO" accession="DRP000407">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB2792</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>Dissected leaves collected 24 h after dissection with a homogenizer, in the reprogramming experiment 2.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS000704" refcenter="ERATO" accession="DRS000704">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00016387</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>Rep2_24h</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>other</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>Described in PMID: 22574165, PMCID: PMC3344888 PLoS One. 2012;7(5):e36471. doi: 10.1371/journal.pone.0036471. http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0036471</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>25</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ABI_SOLID>
                <INSTRUMENT_MODEL>AB SOLiD System 2.0</INSTRUMENT_MODEL>
            </ABI_SOLID>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX></STEP_INDEX>
                    <PREV_STEP_INDEX></PREV_STEP_INDEX>
                    <PROGRAM>SAT2</PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX000733" center_name="ERATO" accession="DRX000733">
        <TITLE>Rep3_G</TITLE>
        <STUDY_REF refname="DRP000407" refcenter="ERATO" accession="DRP000407">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB2792</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>Dissected leaves collected 0 h after dissection with a homogenizer, in the reprogramming experiment 3.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS000704" refcenter="ERATO" accession="DRS000704">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00016387</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>Rep3_G</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>other</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>Described in PMID: 22574165, PMCID: PMC3344888 PLoS One. 2012;7(5):e36471. doi: 10.1371/journal.pone.0036471. http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0036471</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>25</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ABI_SOLID>
                <INSTRUMENT_MODEL>AB SOLiD System 3.0</INSTRUMENT_MODEL>
            </ABI_SOLID>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX></STEP_INDEX>
                    <PREV_STEP_INDEX></PREV_STEP_INDEX>
                    <PROGRAM>SAT3</PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX000734" center_name="ERATO" accession="DRX000734">
        <TITLE>Rep3_1h</TITLE>
        <STUDY_REF refname="DRP000407" refcenter="ERATO" accession="DRP000407">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB2792</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>Dissected leaves collected 1 h after dissection with a homogenizer, in the reprogramming experiment 3.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS000704" refcenter="ERATO" accession="DRS000704">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00016387</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>Rep3_1h</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>other</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>Described in PMID: 22574165, PMCID: PMC3344888 PLoS One. 2012;7(5):e36471. doi: 10.1371/journal.pone.0036471. http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0036471</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>25</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ABI_SOLID>
                <INSTRUMENT_MODEL>AB SOLiD System 3.0</INSTRUMENT_MODEL>
            </ABI_SOLID>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX></STEP_INDEX>
                    <PREV_STEP_INDEX></PREV_STEP_INDEX>
                    <PROGRAM>SAT3</PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX000735" center_name="ERATO" accession="DRX000735">
        <TITLE>Rep3_3h</TITLE>
        <STUDY_REF refname="DRP000407" refcenter="ERATO" accession="DRP000407">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB2792</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>Dissected leaves collected 3 h after dissection with a homogenizer, in the reprogramming experiment 3.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS000704" refcenter="ERATO" accession="DRS000704">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00016387</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>Rep3_3h</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>other</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>Described in PMID: 22574165, PMCID: PMC3344888 PLoS One. 2012;7(5):e36471. doi: 10.1371/journal.pone.0036471. http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0036471</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>25</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ABI_SOLID>
                <INSTRUMENT_MODEL>AB SOLiD System 3.0</INSTRUMENT_MODEL>
            </ABI_SOLID>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX></STEP_INDEX>
                    <PREV_STEP_INDEX></PREV_STEP_INDEX>
                    <PROGRAM>SAT3</PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX000736" center_name="ERATO" accession="DRX000736">
        <TITLE>Rep3_6h</TITLE>
        <STUDY_REF refname="DRP000407" refcenter="ERATO" accession="DRP000407">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB2792</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>Dissected leaves collected 6 h after dissection with a homogenizer, in the reprogramming experiment 3.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS000704" refcenter="ERATO" accession="DRS000704">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00016387</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>Rep3_6h</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>other</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>Described in PMID: 22574165, PMCID: PMC3344888 PLoS One. 2012;7(5):e36471. doi: 10.1371/journal.pone.0036471. http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0036471</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>25</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ABI_SOLID>
                <INSTRUMENT_MODEL>AB SOLiD System 3.0</INSTRUMENT_MODEL>
            </ABI_SOLID>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX></STEP_INDEX>
                    <PREV_STEP_INDEX></PREV_STEP_INDEX>
                    <PROGRAM>SAT3</PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX000737" center_name="ERATO" accession="DRX000737">
        <TITLE>Rep3_12h</TITLE>
        <STUDY_REF refname="DRP000407" refcenter="ERATO" accession="DRP000407">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB2792</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>Dissected leaves collected 12 h after dissection with a homogenizer, in the reprogramming experiment 3.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS000704" refcenter="ERATO" accession="DRS000704">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00016387</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>Rep3_12h</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>other</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>Described in PMID: 22574165, PMCID: PMC3344888 PLoS One. 2012;7(5):e36471. doi: 10.1371/journal.pone.0036471. http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0036471</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>25</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ABI_SOLID>
                <INSTRUMENT_MODEL>AB SOLiD System 3.0</INSTRUMENT_MODEL>
            </ABI_SOLID>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX></STEP_INDEX>
                    <PREV_STEP_INDEX></PREV_STEP_INDEX>
                    <PROGRAM>SAT3</PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX000738" center_name="ERATO" accession="DRX000738">
        <TITLE>Rep3_24h</TITLE>
        <STUDY_REF refname="DRP000407" refcenter="ERATO" accession="DRP000407">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB2792</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>Dissected leaves collected 24 h after dissection with a homogenizer, in the reprogramming experiment 3.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS000704" refcenter="ERATO" accession="DRS000704">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00016387</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>Rep3_24h</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>other</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>Described in PMID: 22574165, PMCID: PMC3344888 PLoS One. 2012;7(5):e36471. doi: 10.1371/journal.pone.0036471. http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0036471</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>25</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ABI_SOLID>
                <INSTRUMENT_MODEL>AB SOLiD System 3.0</INSTRUMENT_MODEL>
            </ABI_SOLID>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX></STEP_INDEX>
                    <PREV_STEP_INDEX></PREV_STEP_INDEX>
                    <PROGRAM>SAT3</PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
</EXPERIMENT_SET>
