<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<EXPERIMENT_SET>
    <EXPERIMENT accession="DRX001106" center_name="HYDRO_CAS" alias="DRX001106">
        <TITLE>fish_related environments_microbiome: CSLDN</TITLE>
        <STUDY_REF accession="DRP000498" refcenter="HYDRO_CAS" refname="DRP000498">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB2186</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>GS-FLX pyrosequencing of an amplicon pool of 16S rRNA gene fragments (~526 bp), spanning the V1 and V3 hypervariable regions, PCR amplified with barcoded primers using gDNA extracted from sample CSLDN as a template.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS001124" refcenter="HYDRO_CAS" refname="DRS001124">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00009125</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>Fish diseases</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>none provided</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>800</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_LABEL>barcode_tag</READ_LABEL>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE>
                            <BASECALL>ATACGCGTGC</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <RELATIVE_ORDER follows_read_index="1"/>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX></STEP_INDEX>
                    <PREV_STEP_INDEX></PREV_STEP_INDEX>
                    <PROGRAM>gsRunProcessor</PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
                <PIPE_SECTION>
                    <STEP_INDEX></STEP_INDEX>
                    <PREV_STEP_INDEX></PREV_STEP_INDEX>
                    <PROGRAM>mothur</PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX001107" center_name="HYDRO_CAS" alias="DRX001107">
        <TITLE>fish_related environments_microbiome: CSLW</TITLE>
        <STUDY_REF accession="DRP000498" refcenter="HYDRO_CAS" refname="DRP000498">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB2186</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>GS-FLX pyrosequencing of an amplicon pool of 16S rRNA gene fragments (~526 bp), spanning the V1 and V3 hypervariable regions, PCR amplified with barcoded primers using gDNA extracted from sample CSLW as a template.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS001125" refcenter="HYDRO_CAS" refname="DRS001125">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00009129</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>Fish diseases</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>none provided</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>800</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_LABEL>barcode_tag</READ_LABEL>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE>
                            <BASECALL>AGTCTGTCTG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <RELATIVE_ORDER follows_read_index="1"/>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX></STEP_INDEX>
                    <PREV_STEP_INDEX></PREV_STEP_INDEX>
                    <PROGRAM>gsRunProcessor</PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
                <PIPE_SECTION>
                    <STEP_INDEX></STEP_INDEX>
                    <PREV_STEP_INDEX></PREV_STEP_INDEX>
                    <PROGRAM>mothur</PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX001108" center_name="HYDRO_CAS" alias="DRX001108">
        <TITLE>fish_related environments_microbiome: PHSL</TITLE>
        <STUDY_REF accession="DRP000498" refcenter="HYDRO_CAS" refname="DRP000498">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB2186</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>GS-FLX pyrosequencing of an amplicon pool of 16S rRNA gene fragments (~526 bp), spanning the V1 and V3 hypervariable regions, PCR amplified with barcoded primers using gDNA extracted from sample PHSL as a template.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS001126" refcenter="HYDRO_CAS" refname="DRS001126">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00009121</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>Fish diseases</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>none provided</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>800</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_LABEL>barcode_tag</READ_LABEL>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE>
                            <BASECALL>AGTATGCACG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <RELATIVE_ORDER follows_read_index="1"/>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX></STEP_INDEX>
                    <PREV_STEP_INDEX></PREV_STEP_INDEX>
                    <PROGRAM>gsRunProcessor</PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
                <PIPE_SECTION>
                    <STEP_INDEX></STEP_INDEX>
                    <PREV_STEP_INDEX></PREV_STEP_INDEX>
                    <PROGRAM>mothur</PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX001109" center_name="HYDRO_CAS" alias="DRX001109">
        <TITLE>fish_related environments_microbiome: FGCM</TITLE>
        <STUDY_REF accession="DRP000498" refcenter="HYDRO_CAS" refname="DRP000498">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB2186</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>GS-FLX pyrosequencing of an amplicon pool of 16S rRNA gene fragments (~526 bp), spanning the V1 and V3 hypervariable regions, PCR amplified with barcoded primers using gDNA extracted from sample FGCM as a template.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS001127" refcenter="HYDRO_CAS" refname="DRS001127">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00009124</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>Fish diseases</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>none provided</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>800</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_LABEL>barcode_tag</READ_LABEL>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE>
                            <BASECALL>ACGAGTAGAC</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <RELATIVE_ORDER follows_read_index="1"/>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX></STEP_INDEX>
                    <PREV_STEP_INDEX></PREV_STEP_INDEX>
                    <PROGRAM>gsRunProcessor</PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
                <PIPE_SECTION>
                    <STEP_INDEX></STEP_INDEX>
                    <PREV_STEP_INDEX></PREV_STEP_INDEX>
                    <PROGRAM>mothur</PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX001110" center_name="HYDRO_CAS" alias="DRX001110">
        <TITLE>fish_related environments_microbiome: FGCC1</TITLE>
        <STUDY_REF accession="DRP000498" refcenter="HYDRO_CAS" refname="DRP000498">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB2186</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>GS-FLX pyrosequencing of an amplicon pool of 16S rRNA gene fragments (~526 bp), spanning the V1 and V3 hypervariable regions, PCR amplified with barcoded primers using gDNA extracted from sample FGCC1 as a template.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS001128" refcenter="HYDRO_CAS" refname="DRS001128">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00009126</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>Fish diseases</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>none provided</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>800</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_LABEL>barcode_tag</READ_LABEL>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE>
                            <BASECALL>ATACTAGCAC</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <RELATIVE_ORDER follows_read_index="1"/>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX></STEP_INDEX>
                    <PREV_STEP_INDEX></PREV_STEP_INDEX>
                    <PROGRAM>gsRunProcessor</PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
                <PIPE_SECTION>
                    <STEP_INDEX></STEP_INDEX>
                    <PREV_STEP_INDEX></PREV_STEP_INDEX>
                    <PROGRAM>mothur</PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX001111" center_name="HYDRO_CAS" alias="DRX001111">
        <TITLE>fish_related environments_microbiome: FGCC2</TITLE>
        <STUDY_REF accession="DRP000498" refcenter="HYDRO_CAS" refname="DRP000498">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB2186</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>GS-FLX pyrosequencing of an amplicon pool of 16S rRNA gene fragments (~526 bp), spanning the V1 and V3 hypervariable regions, PCR amplified with barcoded primers using gDNA extracted from sample FGCC2 as a template.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS001129" refcenter="HYDRO_CAS" refname="DRS001129">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00009122</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>Fish diseases</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>none provided</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>800</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_LABEL>barcode_tag</READ_LABEL>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE>
                            <BASECALL>ATAGAGCTAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <RELATIVE_ORDER follows_read_index="1"/>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX></STEP_INDEX>
                    <PREV_STEP_INDEX></PREV_STEP_INDEX>
                    <PROGRAM>gsRunProcessor</PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
                <PIPE_SECTION>
                    <STEP_INDEX></STEP_INDEX>
                    <PREV_STEP_INDEX></PREV_STEP_INDEX>
                    <PROGRAM>mothur</PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX001112" center_name="HYDRO_CAS" alias="DRX001112">
        <TITLE>fish_related environments_microbiome: FGCC3</TITLE>
        <STUDY_REF accession="DRP000498" refcenter="HYDRO_CAS" refname="DRP000498">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB2186</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>GS-FLX pyrosequencing of an amplicon pool of 16S rRNA gene fragments (~526 bp), spanning the V1 and V3 hypervariable regions, PCR amplified with barcoded primers using gDNA extracted from sample FGCC3 as a template.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS001130" refcenter="HYDRO_CAS" refname="DRS001130">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00009130</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>Fish diseases</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>none provided</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>800</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_LABEL>barcode_tag</READ_LABEL>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE>
                            <BASECALL>ATATAGAGTA</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <RELATIVE_ORDER follows_read_index="1"/>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX></STEP_INDEX>
                    <PREV_STEP_INDEX></PREV_STEP_INDEX>
                    <PROGRAM>gsRunProcessor</PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
                <PIPE_SECTION>
                    <STEP_INDEX></STEP_INDEX>
                    <PREV_STEP_INDEX></PREV_STEP_INDEX>
                    <PROGRAM>mothur</PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX001113" center_name="HYDRO_CAS" alias="DRX001113">
        <TITLE>fish_related environments_microbiome: JYNC</TITLE>
        <STUDY_REF accession="DRP000498" refcenter="HYDRO_CAS" refname="DRP000498">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB2186</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>GS-FLX pyrosequencing of an amplicon pool of 16S rRNA gene fragments (~526 bp), spanning the V1 and V3 hypervariable regions, PCR amplified with barcoded primers using gDNA extracted from sample JYNC as a template.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS001131" refcenter="HYDRO_CAS" refname="DRS001131">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00009120</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>Fish diseases</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>none provided</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>800</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_LABEL>barcode_tag</READ_LABEL>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE>
                            <BASECALL>AGCAGCGTAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <RELATIVE_ORDER follows_read_index="1"/>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX></STEP_INDEX>
                    <PREV_STEP_INDEX></PREV_STEP_INDEX>
                    <PROGRAM>gsRunProcessor</PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
                <PIPE_SECTION>
                    <STEP_INDEX></STEP_INDEX>
                    <PREV_STEP_INDEX></PREV_STEP_INDEX>
                    <PROGRAM>mothur</PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX001114" center_name="HYDRO_CAS" alias="DRX001114">
        <TITLE>fish_related environments_microbiome: JYNa1</TITLE>
        <STUDY_REF accession="DRP000498" refcenter="HYDRO_CAS" refname="DRP000498">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB2186</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>GS-FLX pyrosequencing of an amplicon pool of 16S rRNA gene fragments (~526 bp), spanning the V1 and V3 hypervariable regions, PCR amplified with barcoded primers using gDNA extracted from sample JYNa1 as a template.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS001132" refcenter="HYDRO_CAS" refname="DRS001132">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00009118</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>Fish diseases</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>none provided</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>800</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_LABEL>barcode_tag</READ_LABEL>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE>
                            <BASECALL>AGACATATAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <RELATIVE_ORDER follows_read_index="1"/>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX></STEP_INDEX>
                    <PREV_STEP_INDEX></PREV_STEP_INDEX>
                    <PROGRAM>gsRunProcessor</PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
                <PIPE_SECTION>
                    <STEP_INDEX></STEP_INDEX>
                    <PREV_STEP_INDEX></PREV_STEP_INDEX>
                    <PROGRAM>mothur</PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX001115" center_name="HYDRO_CAS" alias="DRX001115">
        <TITLE>fish_related environments_microbiome: JYNa2</TITLE>
        <STUDY_REF accession="DRP000498" refcenter="HYDRO_CAS" refname="DRP000498">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB2186</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>GS-FLX pyrosequencing of an amplicon pool of 16S rRNA gene fragments (~526 bp), spanning the V1 and V3 hypervariable regions, PCR amplified with barcoded primers using gDNA extracted from sample JYNa2 as a template.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS001133" refcenter="HYDRO_CAS" refname="DRS001133">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00009127</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>Fish diseases</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>none provided</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>800</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_LABEL>barcode_tag</READ_LABEL>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE>
                            <BASECALL>AGACGTGATC</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <RELATIVE_ORDER follows_read_index="1"/>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX></STEP_INDEX>
                    <PREV_STEP_INDEX></PREV_STEP_INDEX>
                    <PROGRAM>gsRunProcessor</PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
                <PIPE_SECTION>
                    <STEP_INDEX></STEP_INDEX>
                    <PREV_STEP_INDEX></PREV_STEP_INDEX>
                    <PROGRAM>mothur</PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX001116" center_name="HYDRO_CAS" alias="DRX001116">
        <TITLE>fish_related environments_microbiome: JYNa3</TITLE>
        <STUDY_REF accession="DRP000498" refcenter="HYDRO_CAS" refname="DRP000498">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB2186</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>GS-FLX pyrosequencing of an amplicon pool of 16S rRNA gene fragments (~526 bp), spanning the V1 and V3 hypervariable regions, PCR amplified with barcoded primers using gDNA extracted from sample JYNa3 as a template.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS001134" refcenter="HYDRO_CAS" refname="DRS001134">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00009119</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>Fish diseases</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>none provided</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>800</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_LABEL>barcode_tag</READ_LABEL>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE>
                            <BASECALL>AGAGTACAGA</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <RELATIVE_ORDER follows_read_index="1"/>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX></STEP_INDEX>
                    <PREV_STEP_INDEX></PREV_STEP_INDEX>
                    <PROGRAM>gsRunProcessor</PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
                <PIPE_SECTION>
                    <STEP_INDEX></STEP_INDEX>
                    <PREV_STEP_INDEX></PREV_STEP_INDEX>
                    <PROGRAM>mothur</PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX001117" center_name="HYDRO_CAS" alias="DRX001117">
        <TITLE>fish_related environments_microbiome: JYNb1</TITLE>
        <STUDY_REF accession="DRP000498" refcenter="HYDRO_CAS" refname="DRP000498">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB2186</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>GS-FLX pyrosequencing of an amplicon pool of 16S rRNA gene fragments (~526 bp), spanning the V1 and V3 hypervariable regions, PCR amplified with barcoded primers using gDNA extracted from sample JYNb1 as a template.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS001135" refcenter="HYDRO_CAS" refname="DRS001135">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00009123</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>Fish diseases</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>none provided</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>800</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_LABEL>barcode_tag</READ_LABEL>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE>
                            <BASECALL>AGAGTATCTC</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <RELATIVE_ORDER follows_read_index="1"/>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX></STEP_INDEX>
                    <PREV_STEP_INDEX></PREV_STEP_INDEX>
                    <PROGRAM>gsRunProcessor</PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
                <PIPE_SECTION>
                    <STEP_INDEX></STEP_INDEX>
                    <PREV_STEP_INDEX></PREV_STEP_INDEX>
                    <PROGRAM>mothur</PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX001118" center_name="HYDRO_CAS" alias="DRX001118">
        <TITLE>fish_related environments_microbiome: JYNb2</TITLE>
        <STUDY_REF accession="DRP000498" refcenter="HYDRO_CAS" refname="DRP000498">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB2186</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>GS-FLX pyrosequencing of an amplicon pool of 16S rRNA gene fragments (~526 bp), spanning the V1 and V3 hypervariable regions, PCR amplified with barcoded primers using gDNA extracted from sample JYNb2 as a template.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS001136" refcenter="HYDRO_CAS" refname="DRS001136">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00009131</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>Fish diseases</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>none provided</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>800</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_LABEL>barcode_tag</READ_LABEL>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE>
                            <BASECALL>AGATACGCTG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <RELATIVE_ORDER follows_read_index="1"/>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX></STEP_INDEX>
                    <PREV_STEP_INDEX></PREV_STEP_INDEX>
                    <PROGRAM>gsRunProcessor</PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
                <PIPE_SECTION>
                    <STEP_INDEX></STEP_INDEX>
                    <PREV_STEP_INDEX></PREV_STEP_INDEX>
                    <PROGRAM>mothur</PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX001119" center_name="HYDRO_CAS" alias="DRX001119">
        <TITLE>fish_related environments_microbiome: JYNb3</TITLE>
        <STUDY_REF accession="DRP000498" refcenter="HYDRO_CAS" refname="DRP000498">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB2186</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>GS-FLX pyrosequencing of an amplicon pool of 16S rRNA gene fragments (~526 bp), spanning the V1 and V3 hypervariable regions, PCR amplified with barcoded primers using gDNA extracted from sample JYNb3 as a template.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS001137" refcenter="HYDRO_CAS" refname="DRS001137">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00009128</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>Fish diseases</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>none provided</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>800</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_LABEL>barcode_tag</READ_LABEL>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE>
                            <BASECALL>AGATCTAGTC</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <RELATIVE_ORDER follows_read_index="1"/>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX></STEP_INDEX>
                    <PREV_STEP_INDEX></PREV_STEP_INDEX>
                    <PROGRAM>gsRunProcessor</PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
                <PIPE_SECTION>
                    <STEP_INDEX></STEP_INDEX>
                    <PREV_STEP_INDEX></PREV_STEP_INDEX>
                    <PROGRAM>mothur</PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
</EXPERIMENT_SET>
