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<ANALYSIS_SET>
    <ANALYSIS accession="DRZ000052" center_name="NIID" alias="DRZ000052" analysis_date="2011-04-15T00:00:00+09:00" analysis_center="NIID">
        <TITLE>Whole genome sequencing of Mycoplasma pneumoniae strain 309</TITLE>
        <STUDY_REF accession="PRJDB8" refname="PRJDB8">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB8</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESCRIPTION>Sequences were assembled by GS de novo assembler software v. 2.5p1. Two assembly analyses were performed, changing parameters of the software. The first analysis gave 12 contigs and the second analysis resulted in 8 contigs.</DESCRIPTION>
        <ANALYSIS_TYPE>
            <DE_NOVO_ASSEMBLY>
                <PROCESSING>
                    <PIPELINE>
                        <PIPE_SECTION>
                            <STEP_INDEX>0</STEP_INDEX>
                            <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                            <PROGRAM>GS de novo Assembler</PROGRAM>
                            <VERSION>2.5p1</VERSION>
                        </PIPE_SECTION>
                    </PIPELINE>
                </PROCESSING>
            </DE_NOVO_ASSEMBLY>
        </ANALYSIS_TYPE>
        <DATA_BLOCK name="454Contigs_1.ace">
            <FILES>
                <FILE checksum="75689aac477db6eec78e6b4e6ac23222" checksum_method="MD5" filetype="ace" filename="454Contigs_1.ace"/>
            </FILES>
        </DATA_BLOCK>
        <DATA_BLOCK name="454Contigs_2.ace">
            <FILES>
                <FILE checksum="9f0374e23ba0aac6f6afc602810e35d0" checksum_method="MD5" filetype="ace" filename="454Contigs_2.ace"/>
            </FILES>
        </DATA_BLOCK>
    </ANALYSIS>
</ANALYSIS_SET>
