<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<EXPERIMENT_SET>
    <EXPERIMENT accession="DRX001579" center_name="NIHS_BFR" alias="DRX001579">
        <TITLE>Genome sequencing of Campylobacter jejuni ST-4526 strain H_0002</TITLE>
        <STUDY_REF accession="DRP000596" refcenter="NIHS_BFR" refname="DRP000596">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB2491</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION></DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS001537" refcenter="NIHS_BFR" refname="DRS001537">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00012246</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>NKB04_D_L1</LIBRARY_NAME>
                <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <PAIRED/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>8kb-pairend library</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Linker</READ_TYPE>
                        <BASE_COORD>5</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>15</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Linker</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE>
                            <BASECALL match_edge="full" max_mismatch="5" min_match="38">TCGTATAACTTCGTATAATGTATGCTATACGAAGTTATTACG</BASECALL>
                            <BASECALL match_edge="full" max_mismatch="5" min_match="38">CGTAATAACTTCGTATAGCATACATTATACGAAGTTATACGA</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>4</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <RELATIVE_ORDER follows_read_index="3"/>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX001580" center_name="NIHS_BFR" alias="DRX001580">
        <TITLE>Genome sequencing of Campylobacter jejuni ST-4526 strain H_0089</TITLE>
        <STUDY_REF accession="DRP000596" refcenter="NIHS_BFR" refname="DRP000596">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB2491</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION></DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS001538" refcenter="NIHS_BFR" refname="DRS001538">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00012245</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>NKB04_E_L1</LIBRARY_NAME>
                <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <PAIRED/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>8kb-pairend library</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Linker</READ_TYPE>
                        <BASE_COORD>5</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>15</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Linker</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE>
                            <BASECALL match_edge="full" max_mismatch="5" min_match="38">TCGTATAACTTCGTATAATGTATGCTATACGAAGTTATTACG</BASECALL>
                            <BASECALL match_edge="full" max_mismatch="5" min_match="38">CGTAATAACTTCGTATAGCATACATTATACGAAGTTATACGA</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>4</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <RELATIVE_ORDER follows_read_index="3"/>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX001581" center_name="NIHS_BFR" alias="DRX001581">
        <TITLE>Genome sequencing of Campylobacter jejuni ST-4526 strain H_0002</TITLE>
        <STUDY_REF accession="DRP000596" refcenter="NIHS_BFR" refname="DRP000596">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB2491</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION></DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS001539" refcenter="NIHS_BFR" refname="DRS001539">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00012244</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>NKB04_F_L1</LIBRARY_NAME>
                <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <PAIRED/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>8kb-pairend library</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Linker</READ_TYPE>
                        <BASE_COORD>5</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>15</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Linker</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE>
                            <BASECALL match_edge="full" max_mismatch="5" min_match="38">TCGTATAACTTCGTATAATGTATGCTATACGAAGTTATTACG</BASECALL>
                            <BASECALL match_edge="full" max_mismatch="5" min_match="38">CGTAATAACTTCGTATAGCATACATTATACGAAGTTATACGA</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>4</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <RELATIVE_ORDER follows_read_index="3"/>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
</EXPERIMENT_SET>
