<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<EXPERIMENT_SET>
    <EXPERIMENT accession="DRX016292" center_name="EHIME" alias="DRX016292">
        <TITLE>HEUG2XR01__AACCAACC__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015760" refcenter="EHIME" refname="DRS015760">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002948</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__AACCAACC__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>AACCAACC</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016293" center_name="EHIME" alias="DRX016293">
        <TITLE>HEUG2XR01__AACCAAGG__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015761" refcenter="EHIME" refname="DRS015761">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002874</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__AACCAAGG__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>AACCAAGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016294" center_name="EHIME" alias="DRX016294">
        <TITLE>HEUG2XR01__AACCATCG__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015762" refcenter="EHIME" refname="DRS015762">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002852</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__AACCATCG__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>AACCATCG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016295" center_name="EHIME" alias="DRX016295">
        <TITLE>HEUG2XR01__AACCATGC__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015763" refcenter="EHIME" refname="DRS015763">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002995</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__AACCATGC__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>AACCATGC</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016296" center_name="EHIME" alias="DRX016296">
        <TITLE>HEUG2XR01__AACCGCAT__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015764" refcenter="EHIME" refname="DRS015764">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002991</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__AACCGCAT__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>AACCGCAT</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016297" center_name="EHIME" alias="DRX016297">
        <TITLE>HEUG2XR01__AACCGCTA__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015765" refcenter="EHIME" refname="DRS015765">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002942</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__AACCGCTA__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>AACCGCTA</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016298" center_name="EHIME" alias="DRX016298">
        <TITLE>HEUG2XR01__AACCGGTT__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015766" refcenter="EHIME" refname="DRS015766">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002853</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__AACCGGTT__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>AACCGGTT</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016299" center_name="EHIME" alias="DRX016299">
        <TITLE>HEUG2XR01__AACCTACG__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015767" refcenter="EHIME" refname="DRS015767">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002981</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__AACCTACG__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>AACCTACG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016300" center_name="EHIME" alias="DRX016300">
        <TITLE>HEUG2XR01__AACCTAGC__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015768" refcenter="EHIME" refname="DRS015768">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002862</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__AACCTAGC__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>AACCTAGC</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016301" center_name="EHIME" alias="DRX016301">
        <TITLE>HEUG2XR01__AACCTTCC__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015769" refcenter="EHIME" refname="DRS015769">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002904</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__AACCTTCC__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>AACCTTCC</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016302" center_name="EHIME" alias="DRX016302">
        <TITLE>HEUG2XR01__AACCTTGG__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015770" refcenter="EHIME" refname="DRS015770">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002971</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__AACCTTGG__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>AACCTTGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016303" center_name="EHIME" alias="DRX016303">
        <TITLE>HEUG2XR01__AACGAACG__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015771" refcenter="EHIME" refname="DRS015771">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002973</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__AACGAACG__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>AACGAACG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016304" center_name="EHIME" alias="DRX016304">
        <TITLE>HEUG2XR01__AACGAAGC__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015772" refcenter="EHIME" refname="DRS015772">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002996</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__AACGAAGC__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>AACGAAGC</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016305" center_name="EHIME" alias="DRX016305">
        <TITLE>HEUG2XR01__AACGATCC__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015773" refcenter="EHIME" refname="DRS015773">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002923</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__AACGATCC__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>AACGATCC</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016306" center_name="EHIME" alias="DRX016306">
        <TITLE>HEUG2XR01__AACGATGG__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015774" refcenter="EHIME" refname="DRS015774">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002987</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__AACGATGG__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>AACGATGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016307" center_name="EHIME" alias="DRX016307">
        <TITLE>HEUG2XR01__AACGCCAT__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015775" refcenter="EHIME" refname="DRS015775">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002989</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__AACGCCAT__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>AACGCCAT</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016308" center_name="EHIME" alias="DRX016308">
        <TITLE>HEUG2XR01__AACGCCTA__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015776" refcenter="EHIME" refname="DRS015776">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002937</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__AACGCCTA__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>AACGCCTA</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016309" center_name="EHIME" alias="DRX016309">
        <TITLE>HEUG2XR01__AACGCGTT__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015777" refcenter="EHIME" refname="DRS015777">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002843</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__AACGCGTT__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>AACGCGTT</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016310" center_name="EHIME" alias="DRX016310">
        <TITLE>HEUG2XR01__AACGGCTT__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015778" refcenter="EHIME" refname="DRS015778">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002902</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__AACGGCTT__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>AACGGCTT</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016311" center_name="EHIME" alias="DRX016311">
        <TITLE>HEUG2XR01__AACGTACC__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015779" refcenter="EHIME" refname="DRS015779">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00003000</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__AACGTACC__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>AACGTACC</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016312" center_name="EHIME" alias="DRX016312">
        <TITLE>HEUG2XR01__AACGTAGG__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015780" refcenter="EHIME" refname="DRS015780">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002918</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__AACGTAGG__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>AACGTAGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016313" center_name="EHIME" alias="DRX016313">
        <TITLE>HEUG2XR01__AACGTTCG__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015781" refcenter="EHIME" refname="DRS015781">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002967</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__AACGTTCG__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>AACGTTCG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016314" center_name="EHIME" alias="DRX016314">
        <TITLE>HEUG2XR01__AACGTTGC__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015782" refcenter="EHIME" refname="DRS015782">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002940</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__AACGTTGC__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>AACGTTGC</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016315" center_name="EHIME" alias="DRX016315">
        <TITLE>HEUG2XR01__AAGCAACG__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015783" refcenter="EHIME" refname="DRS015783">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002868</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__AAGCAACG__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>AAGCAACG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016316" center_name="EHIME" alias="DRX016316">
        <TITLE>HEUG2XR01__AAGCAAGC__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015784" refcenter="EHIME" refname="DRS015784">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002905</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__AAGCAAGC__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>AAGCAAGC</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016317" center_name="EHIME" alias="DRX016317">
        <TITLE>HEUG2XR01__AAGCATCC__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015785" refcenter="EHIME" refname="DRS015785">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002892</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__AAGCATCC__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>AAGCATCC</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016318" center_name="EHIME" alias="DRX016318">
        <TITLE>HEUG2XR01__AAGCATGG__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015786" refcenter="EHIME" refname="DRS015786">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002889</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__AAGCATGG__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>AAGCATGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016319" center_name="EHIME" alias="DRX016319">
        <TITLE>HEUG2XR01__AAGCGCTT__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015787" refcenter="EHIME" refname="DRS015787">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002849</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__AAGCGCTT__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>AAGCGCTT</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016320" center_name="EHIME" alias="DRX016320">
        <TITLE>HEUG2XR01__AAGCGGAT__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015788" refcenter="EHIME" refname="DRS015788">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002836</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__AAGCGGAT__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>AAGCGGAT</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016321" center_name="EHIME" alias="DRX016321">
        <TITLE>HEUG2XR01__AAGCGGTA__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015789" refcenter="EHIME" refname="DRS015789">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002978</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__AAGCGGTA__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>AAGCGGTA</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016322" center_name="EHIME" alias="DRX016322">
        <TITLE>HEUG2XR01__AAGCTACC__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015790" refcenter="EHIME" refname="DRS015790">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002895</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__AAGCTACC__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>AAGCTACC</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016323" center_name="EHIME" alias="DRX016323">
        <TITLE>HEUG2XR01__AAGCTAGG__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015791" refcenter="EHIME" refname="DRS015791">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002916</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__AAGCTAGG__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>AAGCTAGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016324" center_name="EHIME" alias="DRX016324">
        <TITLE>HEUG2XR01__AAGCTTCG__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015792" refcenter="EHIME" refname="DRS015792">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002867</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__AAGCTTCG__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>AAGCTTCG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016325" center_name="EHIME" alias="DRX016325">
        <TITLE>HEUG2XR01__AAGCTTGC__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015793" refcenter="EHIME" refname="DRS015793">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002938</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__AAGCTTGC__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>AAGCTTGC</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016326" center_name="EHIME" alias="DRX016326">
        <TITLE>HEUG2XR01__AAGGAACC__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015794" refcenter="EHIME" refname="DRS015794">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002969</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__AAGGAACC__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>AAGGAACC</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016327" center_name="EHIME" alias="DRX016327">
        <TITLE>HEUG2XR01__AAGGAAGG__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015795" refcenter="EHIME" refname="DRS015795">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002893</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__AAGGAAGG__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>AAGGAAGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016328" center_name="EHIME" alias="DRX016328">
        <TITLE>HEUG2XR01__AAGGATCG__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015796" refcenter="EHIME" refname="DRS015796">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002965</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__AAGGATCG__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>AAGGATCG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016329" center_name="EHIME" alias="DRX016329">
        <TITLE>HEUG2XR01__AAGGATGC__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015797" refcenter="EHIME" refname="DRS015797">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002932</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__AAGGATGC__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>AAGGATGC</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016330" center_name="EHIME" alias="DRX016330">
        <TITLE>HEUG2XR01__AAGGCCTT__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015798" refcenter="EHIME" refname="DRS015798">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002975</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__AAGGCCTT__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>AAGGCCTT</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016331" center_name="EHIME" alias="DRX016331">
        <TITLE>HEUG2XR01__AAGGCGAT__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015799" refcenter="EHIME" refname="DRS015799">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002917</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__AAGGCGAT__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>AAGGCGAT</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016332" center_name="EHIME" alias="DRX016332">
        <TITLE>HEUG2XR01__AAGGCGTA__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015800" refcenter="EHIME" refname="DRS015800">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002890</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__AAGGCGTA__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>AAGGCGTA</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016333" center_name="EHIME" alias="DRX016333">
        <TITLE>HEUG2XR01__AAGGTACG__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015801" refcenter="EHIME" refname="DRS015801">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002951</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__AAGGTACG__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>AAGGTACG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016334" center_name="EHIME" alias="DRX016334">
        <TITLE>HEUG2XR01__AAGGTTCC__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015802" refcenter="EHIME" refname="DRS015802">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002872</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__AAGGTTCC__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>AAGGTTCC</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016335" center_name="EHIME" alias="DRX016335">
        <TITLE>HEUG2XR01__AAGGTTGG__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015803" refcenter="EHIME" refname="DRS015803">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002861</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__AAGGTTGG__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>AAGGTTGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016336" center_name="EHIME" alias="DRX016336">
        <TITLE>HEUG2XR01__AATACGCC__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015804" refcenter="EHIME" refname="DRS015804">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002943</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__AATACGCC__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>AATACGCC</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016337" center_name="EHIME" alias="DRX016337">
        <TITLE>HEUG2XR01__AATAGCGG__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015805" refcenter="EHIME" refname="DRS015805">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002873</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__AATAGCGG__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>AATAGCGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016338" center_name="EHIME" alias="DRX016338">
        <TITLE>HEUG2XR01__AATAGGCG__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015806" refcenter="EHIME" refname="DRS015806">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002983</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__AATAGGCG__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>AATAGGCG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016339" center_name="EHIME" alias="DRX016339">
        <TITLE>HEUG2XR01__AATTCGCG__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015807" refcenter="EHIME" refname="DRS015807">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002887</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__AATTCGCG__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>AATTCGCG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016340" center_name="EHIME" alias="DRX016340">
        <TITLE>HEUG2XR01__AATTCGGC__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015808" refcenter="EHIME" refname="DRS015808">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002856</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__AATTCGGC__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>AATTCGGC</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016341" center_name="EHIME" alias="DRX016341">
        <TITLE>HEUG2XR01__AATTGCCG__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015809" refcenter="EHIME" refname="DRS015809">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002992</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__AATTGCCG__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>AATTGCCG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016342" center_name="EHIME" alias="DRX016342">
        <TITLE>HEUG2XR01__AATTGCGC__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015810" refcenter="EHIME" refname="DRS015810">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002919</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__AATTGCGC__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>AATTGCGC</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016343" center_name="EHIME" alias="DRX016343">
        <TITLE>HEUG2XR01__AATTGGCC__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015811" refcenter="EHIME" refname="DRS015811">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002838</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__AATTGGCC__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>AATTGGCC</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016344" center_name="EHIME" alias="DRX016344">
        <TITLE>HEUG2XR01__ACACACAC__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015812" refcenter="EHIME" refname="DRS015812">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002945</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACACACAC__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACACACAC</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016345" center_name="EHIME" alias="DRX016345">
        <TITLE>HEUG2XR01__ACACACTG__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015813" refcenter="EHIME" refname="DRS015813">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002847</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACACACTG__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACACACTG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016346" center_name="EHIME" alias="DRX016346">
        <TITLE>HEUG2XR01__ACACAGAG__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015814" refcenter="EHIME" refname="DRS015814">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002913</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACACAGAG__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACACAGAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016347" center_name="EHIME" alias="DRX016347">
        <TITLE>HEUG2XR01__ACACAGTC__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015815" refcenter="EHIME" refname="DRS015815">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002914</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACACAGTC__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACACAGTC</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016348" center_name="EHIME" alias="DRX016348">
        <TITLE>HEUG2XR01__ACACCACA__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015816" refcenter="EHIME" refname="DRS015816">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002924</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACACCACA__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACACCACA</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016349" center_name="EHIME" alias="DRX016349">
        <TITLE>HEUG2XR01__ACACCAGT__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015817" refcenter="EHIME" refname="DRS015817">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002906</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACACCAGT__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACACCAGT</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016350" center_name="EHIME" alias="DRX016350">
        <TITLE>HEUG2XR01__ACACCTCT__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015818" refcenter="EHIME" refname="DRS015818">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002865</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACACCTCT__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACACCTCT</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016351" center_name="EHIME" alias="DRX016351">
        <TITLE>HEUG2XR01__ACACCTGA__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015819" refcenter="EHIME" refname="DRS015819">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002999</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACACCTGA__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACACCTGA</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016352" center_name="EHIME" alias="DRX016352">
        <TITLE>HEUG2XR01__ACACGACT__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015820" refcenter="EHIME" refname="DRS015820">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002869</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACACGACT__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACACGACT</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016353" center_name="EHIME" alias="DRX016353">
        <TITLE>HEUG2XR01__ACACGAGA__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015821" refcenter="EHIME" refname="DRS015821">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002929</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACACGAGA__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACACGAGA</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016354" center_name="EHIME" alias="DRX016354">
        <TITLE>HEUG2XR01__ACACGTCA__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015822" refcenter="EHIME" refname="DRS015822">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002977</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACACGTCA__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACACGTCA</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016355" center_name="EHIME" alias="DRX016355">
        <TITLE>HEUG2XR01__ACACGTGT__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015823" refcenter="EHIME" refname="DRS015823">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002939</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACACGTGT__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACACGTGT</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016356" center_name="EHIME" alias="DRX016356">
        <TITLE>HEUG2XR01__ACACTCAG__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015824" refcenter="EHIME" refname="DRS015824">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002994</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACACTCAG__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACACTCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016357" center_name="EHIME" alias="DRX016357">
        <TITLE>HEUG2XR01__ACACTCTC__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015825" refcenter="EHIME" refname="DRS015825">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002956</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACACTCTC__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACACTCTC</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016358" center_name="EHIME" alias="DRX016358">
        <TITLE>HEUG2XR01__ACACTGAC__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015826" refcenter="EHIME" refname="DRS015826">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002955</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACACTGAC__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACACTGAC</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016359" center_name="EHIME" alias="DRX016359">
        <TITLE>HEUG2XR01__ACACTGTG__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015827" refcenter="EHIME" refname="DRS015827">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002968</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACACTGTG__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACACTGTG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016360" center_name="EHIME" alias="DRX016360">
        <TITLE>HEUG2XR01__ACAGACAG__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015828" refcenter="EHIME" refname="DRS015828">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002835</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACAGACAG__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACAGACAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016361" center_name="EHIME" alias="DRX016361">
        <TITLE>HEUG2XR01__ACAGACTC__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015829" refcenter="EHIME" refname="DRS015829">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002909</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACAGACTC__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACAGACTC</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016362" center_name="EHIME" alias="DRX016362">
        <TITLE>HEUG2XR01__ACAGAGAC__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015830" refcenter="EHIME" refname="DRS015830">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002980</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACAGAGAC__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACAGAGAC</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016363" center_name="EHIME" alias="DRX016363">
        <TITLE>HEUG2XR01__ACAGAGTG__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015831" refcenter="EHIME" refname="DRS015831">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002888</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACAGAGTG__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACAGAGTG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016364" center_name="EHIME" alias="DRX016364">
        <TITLE>HEUG2XR01__ACAGCACT__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015832" refcenter="EHIME" refname="DRS015832">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002900</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACAGCACT__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACAGCACT</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016365" center_name="EHIME" alias="DRX016365">
        <TITLE>HEUG2XR01__ACAGCAGA__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015833" refcenter="EHIME" refname="DRS015833">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002876</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACAGCAGA__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACAGCAGA</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016366" center_name="EHIME" alias="DRX016366">
        <TITLE>HEUG2XR01__ACAGCTCA__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015834" refcenter="EHIME" refname="DRS015834">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002927</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACAGCTCA__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACAGCTCA</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016367" center_name="EHIME" alias="DRX016367">
        <TITLE>HEUG2XR01__ACAGCTGT__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015835" refcenter="EHIME" refname="DRS015835">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002880</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACAGCTGT__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACAGCTGT</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016368" center_name="EHIME" alias="DRX016368">
        <TITLE>HEUG2XR01__ACAGGACA__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015836" refcenter="EHIME" refname="DRS015836">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002993</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACAGGACA__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACAGGACA</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016369" center_name="EHIME" alias="DRX016369">
        <TITLE>HEUG2XR01__ACAGGAGT__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015837" refcenter="EHIME" refname="DRS015837">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002870</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACAGGAGT__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACAGGAGT</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016370" center_name="EHIME" alias="DRX016370">
        <TITLE>HEUG2XR01__ACAGGTCT__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015838" refcenter="EHIME" refname="DRS015838">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002910</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACAGGTCT__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACAGGTCT</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016371" center_name="EHIME" alias="DRX016371">
        <TITLE>HEUG2XR01__ACAGGTGA__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015839" refcenter="EHIME" refname="DRS015839">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002846</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACAGGTGA__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACAGGTGA</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016372" center_name="EHIME" alias="DRX016372">
        <TITLE>HEUG2XR01__ACAGTCAC__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015840" refcenter="EHIME" refname="DRS015840">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002879</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACAGTCAC__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACAGTCAC</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016373" center_name="EHIME" alias="DRX016373">
        <TITLE>HEUG2XR01__ACAGTCTG__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015841" refcenter="EHIME" refname="DRS015841">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002898</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACAGTCTG__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACAGTCTG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016374" center_name="EHIME" alias="DRX016374">
        <TITLE>HEUG2XR01__ACAGTGAG__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015842" refcenter="EHIME" refname="DRS015842">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002859</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACAGTGAG__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACAGTGAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016375" center_name="EHIME" alias="DRX016375">
        <TITLE>HEUG2XR01__ACAGTGTC__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015843" refcenter="EHIME" refname="DRS015843">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002855</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACAGTGTC__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACAGTGTC</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016376" center_name="EHIME" alias="DRX016376">
        <TITLE>HEUG2XR01__ACCAACCA__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015844" refcenter="EHIME" refname="DRS015844">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002841</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACCAACCA__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACCAACCA</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016377" center_name="EHIME" alias="DRX016377">
        <TITLE>HEUG2XR01__ACCAACGT__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015845" refcenter="EHIME" refname="DRS015845">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002866</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACCAACGT__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACCAACGT</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016378" center_name="EHIME" alias="DRX016378">
        <TITLE>HEUG2XR01__ACCAAGCT__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015846" refcenter="EHIME" refname="DRS015846">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002848</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACCAAGCT__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACCAAGCT</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016379" center_name="EHIME" alias="DRX016379">
        <TITLE>HEUG2XR01__ACCAAGGA__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015847" refcenter="EHIME" refname="DRS015847">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002840</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACCAAGGA__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACCAAGGA</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016380" center_name="EHIME" alias="DRX016380">
        <TITLE>HEUG2XR01__ACCACAAC__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015848" refcenter="EHIME" refname="DRS015848">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002864</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACCACAAC__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACCACAAC</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016381" center_name="EHIME" alias="DRX016381">
        <TITLE>HEUG2XR01__ACCACATG__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015849" refcenter="EHIME" refname="DRS015849">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002921</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACCACATG__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACCACATG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016382" center_name="EHIME" alias="DRX016382">
        <TITLE>HEUG2XR01__ACCACTAG__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015850" refcenter="EHIME" refname="DRS015850">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002984</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACCACTAG__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACCACTAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016383" center_name="EHIME" alias="DRX016383">
        <TITLE>HEUG2XR01__ACCACTTC__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015851" refcenter="EHIME" refname="DRS015851">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00003001</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACCACTTC__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACCACTTC</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016384" center_name="EHIME" alias="DRX016384">
        <TITLE>HEUG2XR01__ACCAGAAG__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015852" refcenter="EHIME" refname="DRS015852">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002886</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACCAGAAG__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACCAGAAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016385" center_name="EHIME" alias="DRX016385">
        <TITLE>HEUG2XR01__ACCAGATC__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015853" refcenter="EHIME" refname="DRS015853">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002964</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACCAGATC__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACCAGATC</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016386" center_name="EHIME" alias="DRX016386">
        <TITLE>HEUG2XR01__ACCAGTAC__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015854" refcenter="EHIME" refname="DRS015854">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002854</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACCAGTAC__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACCAGTAC</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016387" center_name="EHIME" alias="DRX016387">
        <TITLE>HEUG2XR01__ACCAGTTG__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015855" refcenter="EHIME" refname="DRS015855">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002911</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACCAGTTG__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACCAGTTG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016388" center_name="EHIME" alias="DRX016388">
        <TITLE>HEUG2XR01__ACCATCCT__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015856" refcenter="EHIME" refname="DRS015856">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002842</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACCATCCT__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACCATCCT</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016389" center_name="EHIME" alias="DRX016389">
        <TITLE>HEUG2XR01__ACCATCGA__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015857" refcenter="EHIME" refname="DRS015857">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002988</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACCATCGA__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACCATCGA</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016390" center_name="EHIME" alias="DRX016390">
        <TITLE>HEUG2XR01__ACCATGCA__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015858" refcenter="EHIME" refname="DRS015858">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002986</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACCATGCA__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACCATGCA</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016391" center_name="EHIME" alias="DRX016391">
        <TITLE>HEUG2XR01__ACCATGGT__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015859" refcenter="EHIME" refname="DRS015859">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002920</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACCATGGT__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACCATGGT</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016392" center_name="EHIME" alias="DRX016392">
        <TITLE>HEUG2XR01__ACCTACCT__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015860" refcenter="EHIME" refname="DRS015860">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002963</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACCTACCT__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACCTACCT</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016393" center_name="EHIME" alias="DRX016393">
        <TITLE>HEUG2XR01__ACCTACGA__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015861" refcenter="EHIME" refname="DRS015861">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002944</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACCTACGA__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACCTACGA</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016394" center_name="EHIME" alias="DRX016394">
        <TITLE>HEUG2XR01__ACCTAGCA__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015862" refcenter="EHIME" refname="DRS015862">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002952</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACCTAGCA__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACCTAGCA</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016395" center_name="EHIME" alias="DRX016395">
        <TITLE>HEUG2XR01__ACCTAGGT__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015863" refcenter="EHIME" refname="DRS015863">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002934</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACCTAGGT__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACCTAGGT</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016396" center_name="EHIME" alias="DRX016396">
        <TITLE>HEUG2XR01__ACCTCAAG__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015864" refcenter="EHIME" refname="DRS015864">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002933</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACCTCAAG__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACCTCAAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016397" center_name="EHIME" alias="DRX016397">
        <TITLE>HEUG2XR01__ACCTCATC__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015865" refcenter="EHIME" refname="DRS015865">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002922</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACCTCATC__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACCTCATC</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016398" center_name="EHIME" alias="DRX016398">
        <TITLE>HEUG2XR01__ACCTCTAC__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015866" refcenter="EHIME" refname="DRS015866">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002998</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACCTCTAC__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACCTCTAC</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016399" center_name="EHIME" alias="DRX016399">
        <TITLE>HEUG2XR01__ACCTCTTG__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015867" refcenter="EHIME" refname="DRS015867">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002860</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACCTCTTG__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACCTCTTG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016400" center_name="EHIME" alias="DRX016400">
        <TITLE>HEUG2XR01__ACCTGAAC__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015868" refcenter="EHIME" refname="DRS015868">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002863</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACCTGAAC__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACCTGAAC</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016401" center_name="EHIME" alias="DRX016401">
        <TITLE>HEUG2XR01__ACCTGATG__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015869" refcenter="EHIME" refname="DRS015869">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002979</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACCTGATG__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACCTGATG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016402" center_name="EHIME" alias="DRX016402">
        <TITLE>HEUG2XR01__ACCTGTTC__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015870" refcenter="EHIME" refname="DRS015870">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002882</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACCTGTTC__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACCTGTTC</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016403" center_name="EHIME" alias="DRX016403">
        <TITLE>HEUG2XR01__ACCTTCCA__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015871" refcenter="EHIME" refname="DRS015871">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002907</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACCTTCCA__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACCTTCCA</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016404" center_name="EHIME" alias="DRX016404">
        <TITLE>HEUG2XR01__ACCTTCGT__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015872" refcenter="EHIME" refname="DRS015872">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002903</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACCTTCGT__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACCTTCGT</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016405" center_name="EHIME" alias="DRX016405">
        <TITLE>HEUG2XR01__ACCTTGCT__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015873" refcenter="EHIME" refname="DRS015873">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002925</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACCTTGCT__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACCTTGCT</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016406" center_name="EHIME" alias="DRX016406">
        <TITLE>HEUG2XR01__ACCTTGGA__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015874" refcenter="EHIME" refname="DRS015874">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002875</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACCTTGGA__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACCTTGGA</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016407" center_name="EHIME" alias="DRX016407">
        <TITLE>HEUG2XR01__ACGAACCT__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015875" refcenter="EHIME" refname="DRS015875">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002894</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACGAACCT__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACGAACCT</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016408" center_name="EHIME" alias="DRX016408">
        <TITLE>HEUG2XR01__ACGAACGA__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015876" refcenter="EHIME" refname="DRS015876">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002883</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACGAACGA__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACGAACGA</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016409" center_name="EHIME" alias="DRX016409">
        <TITLE>HEUG2XR01__ACGAAGCA__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015877" refcenter="EHIME" refname="DRS015877">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002897</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACGAAGCA__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACGAAGCA</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016410" center_name="EHIME" alias="DRX016410">
        <TITLE>HEUG2XR01__ACGAAGGT__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015878" refcenter="EHIME" refname="DRS015878">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002953</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACGAAGGT__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACGAAGGT</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016411" center_name="EHIME" alias="DRX016411">
        <TITLE>HEUG2XR01__ACGACAAG__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015879" refcenter="EHIME" refname="DRS015879">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002954</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACGACAAG__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACGACAAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016412" center_name="EHIME" alias="DRX016412">
        <TITLE>HEUG2XR01__ACGACATC__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015880" refcenter="EHIME" refname="DRS015880">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002857</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACGACATC__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACGACATC</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016413" center_name="EHIME" alias="DRX016413">
        <TITLE>HEUG2XR01__ACGACTAC__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015881" refcenter="EHIME" refname="DRS015881">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002930</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACGACTAC__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACGACTAC</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016414" center_name="EHIME" alias="DRX016414">
        <TITLE>HEUG2XR01__ACGACTTG__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015882" refcenter="EHIME" refname="DRS015882">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002884</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACGACTTG__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACGACTTG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016415" center_name="EHIME" alias="DRX016415">
        <TITLE>HEUG2XR01__ACGAGAAC__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015883" refcenter="EHIME" refname="DRS015883">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00003002</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACGAGAAC__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACGAGAAC</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016416" center_name="EHIME" alias="DRX016416">
        <TITLE>HEUG2XR01__ACGAGATG__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015884" refcenter="EHIME" refname="DRS015884">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002908</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACGAGATG__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACGAGATG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016417" center_name="EHIME" alias="DRX016417">
        <TITLE>HEUG2XR01__ACGAGTAG__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015885" refcenter="EHIME" refname="DRS015885">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002941</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACGAGTAG__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACGAGTAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016418" center_name="EHIME" alias="DRX016418">
        <TITLE>HEUG2XR01__ACGAGTTC__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015886" refcenter="EHIME" refname="DRS015886">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002926</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACGAGTTC__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACGAGTTC</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016419" center_name="EHIME" alias="DRX016419">
        <TITLE>HEUG2XR01__ACGATCCA__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015887" refcenter="EHIME" refname="DRS015887">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002970</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACGATCCA__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACGATCCA</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016420" center_name="EHIME" alias="DRX016420">
        <TITLE>HEUG2XR01__ACGATCGT__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015888" refcenter="EHIME" refname="DRS015888">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002972</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACGATCGT__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACGATCGT</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016421" center_name="EHIME" alias="DRX016421">
        <TITLE>HEUG2XR01__ACGATGCT__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015889" refcenter="EHIME" refname="DRS015889">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002858</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACGATGCT__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACGATGCT</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016422" center_name="EHIME" alias="DRX016422">
        <TITLE>HEUG2XR01__ACGATGGA__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015890" refcenter="EHIME" refname="DRS015890">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002936</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACGATGGA__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACGATGGA</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016423" center_name="EHIME" alias="DRX016423">
        <TITLE>HEUG2XR01__ACGTACCA__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015891" refcenter="EHIME" refname="DRS015891">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002997</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACGTACCA__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACGTACCA</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016424" center_name="EHIME" alias="DRX016424">
        <TITLE>HEUG2XR01__ACGTACGT__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015892" refcenter="EHIME" refname="DRS015892">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002832</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACGTACGT__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACGTACGT</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016425" center_name="EHIME" alias="DRX016425">
        <TITLE>HEUG2XR01__ACGTAGCT__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015893" refcenter="EHIME" refname="DRS015893">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002839</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACGTAGCT__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACGTAGCT</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016426" center_name="EHIME" alias="DRX016426">
        <TITLE>HEUG2XR01__ACGTAGGA__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015894" refcenter="EHIME" refname="DRS015894">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002974</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACGTAGGA__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACGTAGGA</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016427" center_name="EHIME" alias="DRX016427">
        <TITLE>HEUG2XR01__ACGTCAAC__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015895" refcenter="EHIME" refname="DRS015895">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00003004</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACGTCAAC__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACGTCAAC</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016428" center_name="EHIME" alias="DRX016428">
        <TITLE>HEUG2XR01__ACGTCATG__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015896" refcenter="EHIME" refname="DRS015896">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002950</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACGTCATG__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACGTCATG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016429" center_name="EHIME" alias="DRX016429">
        <TITLE>HEUG2XR01__ACGTCTAG__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015897" refcenter="EHIME" refname="DRS015897">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002990</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACGTCTAG__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACGTCTAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016430" center_name="EHIME" alias="DRX016430">
        <TITLE>HEUG2XR01__ACGTGAAG__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015898" refcenter="EHIME" refname="DRS015898">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002891</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACGTGAAG__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACGTGAAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016431" center_name="EHIME" alias="DRX016431">
        <TITLE>HEUG2XR01__ACGTGATC__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015899" refcenter="EHIME" refname="DRS015899">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002982</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACGTGATC__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACGTGATC</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016432" center_name="EHIME" alias="DRX016432">
        <TITLE>HEUG2XR01__ACGTGTAC__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015900" refcenter="EHIME" refname="DRS015900">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002946</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACGTGTAC__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACGTGTAC</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016433" center_name="EHIME" alias="DRX016433">
        <TITLE>HEUG2XR01__ACGTGTTG__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015901" refcenter="EHIME" refname="DRS015901">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002935</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACGTGTTG__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACGTGTTG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016434" center_name="EHIME" alias="DRX016434">
        <TITLE>HEUG2XR01__ACGTTCCT__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015902" refcenter="EHIME" refname="DRS015902">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002877</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACGTTCCT__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACGTTCCT</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016435" center_name="EHIME" alias="DRX016435">
        <TITLE>HEUG2XR01__ACGTTCGA__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015903" refcenter="EHIME" refname="DRS015903">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002896</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACGTTCGA__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACGTTCGA</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016436" center_name="EHIME" alias="DRX016436">
        <TITLE>HEUG2XR01__ACGTTGCA__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015904" refcenter="EHIME" refname="DRS015904">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002850</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACGTTGCA__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACGTTGCA</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016437" center_name="EHIME" alias="DRX016437">
        <TITLE>HEUG2XR01__ACGTTGGT__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015905" refcenter="EHIME" refname="DRS015905">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002931</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACGTTGGT__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACGTTGGT</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016438" center_name="EHIME" alias="DRX016438">
        <TITLE>HEUG2XR01__ACTCACAG__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015906" refcenter="EHIME" refname="DRS015906">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002962</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACTCACAG__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACTCACAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016439" center_name="EHIME" alias="DRX016439">
        <TITLE>HEUG2XR01__ACTCACTC__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015907" refcenter="EHIME" refname="DRS015907">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002915</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACTCACTC__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACTCACTC</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016440" center_name="EHIME" alias="DRX016440">
        <TITLE>HEUG2XR01__ACTCAGAC__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015908" refcenter="EHIME" refname="DRS015908">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002901</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACTCAGAC__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACTCAGAC</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016441" center_name="EHIME" alias="DRX016441">
        <TITLE>HEUG2XR01__ACTCAGTG__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015909" refcenter="EHIME" refname="DRS015909">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002976</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACTCAGTG__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACTCAGTG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016442" center_name="EHIME" alias="DRX016442">
        <TITLE>HEUG2XR01__ACTCCACT__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015910" refcenter="EHIME" refname="DRS015910">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002844</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACTCCACT__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACTCCACT</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016443" center_name="EHIME" alias="DRX016443">
        <TITLE>HEUG2XR01__ACTCCAGA__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015911" refcenter="EHIME" refname="DRS015911">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002960</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACTCCAGA__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACTCCAGA</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016444" center_name="EHIME" alias="DRX016444">
        <TITLE>HEUG2XR01__ACTCCTCA__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015912" refcenter="EHIME" refname="DRS015912">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002961</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACTCCTCA__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACTCCTCA</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016445" center_name="EHIME" alias="DRX016445">
        <TITLE>HEUG2XR01__ACTCCTGT__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015913" refcenter="EHIME" refname="DRS015913">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00003003</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACTCCTGT__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACTCCTGT</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016446" center_name="EHIME" alias="DRX016446">
        <TITLE>HEUG2XR01__ACTCGACA__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015914" refcenter="EHIME" refname="DRS015914">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002912</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACTCGACA__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACTCGACA</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016447" center_name="EHIME" alias="DRX016447">
        <TITLE>HEUG2XR01__ACTCGAGT__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015915" refcenter="EHIME" refname="DRS015915">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002985</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACTCGAGT__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACTCGAGT</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016448" center_name="EHIME" alias="DRX016448">
        <TITLE>HEUG2XR01__ACTCGTCT__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015916" refcenter="EHIME" refname="DRS015916">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002881</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACTCGTCT__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACTCGTCT</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016449" center_name="EHIME" alias="DRX016449">
        <TITLE>HEUG2XR01__ACTCGTGA__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015917" refcenter="EHIME" refname="DRS015917">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002878</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACTCGTGA__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACTCGTGA</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016450" center_name="EHIME" alias="DRX016450">
        <TITLE>HEUG2XR01__ACTCTCAC__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015918" refcenter="EHIME" refname="DRS015918">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002834</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACTCTCAC__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACTCTCAC</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016451" center_name="EHIME" alias="DRX016451">
        <TITLE>HEUG2XR01__ACTCTCTG__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015919" refcenter="EHIME" refname="DRS015919">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002871</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACTCTCTG__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACTCTCTG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016452" center_name="EHIME" alias="DRX016452">
        <TITLE>HEUG2XR01__ACTCTGAG__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015920" refcenter="EHIME" refname="DRS015920">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002958</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACTCTGAG__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACTCTGAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016453" center_name="EHIME" alias="DRX016453">
        <TITLE>HEUG2XR01__ACTCTGTC__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015921" refcenter="EHIME" refname="DRS015921">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002947</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACTCTGTC__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACTCTGTC</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016454" center_name="EHIME" alias="DRX016454">
        <TITLE>HEUG2XR01__ACTGACAC__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015922" refcenter="EHIME" refname="DRS015922">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002837</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACTGACAC__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACTGACAC</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016455" center_name="EHIME" alias="DRX016455">
        <TITLE>HEUG2XR01__ACTGACTG__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015923" refcenter="EHIME" refname="DRS015923">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002966</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACTGACTG__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACTGACTG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016456" center_name="EHIME" alias="DRX016456">
        <TITLE>HEUG2XR01__ACTGAGAG__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015924" refcenter="EHIME" refname="DRS015924">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002949</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACTGAGAG__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACTGAGAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016457" center_name="EHIME" alias="DRX016457">
        <TITLE>HEUG2XR01__ACTGAGTC__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015925" refcenter="EHIME" refname="DRS015925">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002899</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACTGAGTC__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACTGAGTC</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016458" center_name="EHIME" alias="DRX016458">
        <TITLE>HEUG2XR01__ACTGCACA__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015926" refcenter="EHIME" refname="DRS015926">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002851</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACTGCACA__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACTGCACA</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016459" center_name="EHIME" alias="DRX016459">
        <TITLE>HEUG2XR01__ACTGCAGT__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015927" refcenter="EHIME" refname="DRS015927">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002845</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACTGCAGT__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACTGCAGT</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016460" center_name="EHIME" alias="DRX016460">
        <TITLE>HEUG2XR01__ACTGCTCT__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015928" refcenter="EHIME" refname="DRS015928">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002957</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACTGCTCT__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACTGCTCT</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016461" center_name="EHIME" alias="DRX016461">
        <TITLE>HEUG2XR01__ACTGCTGA__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015929" refcenter="EHIME" refname="DRS015929">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002959</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACTGCTGA__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACTGCTGA</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016462" center_name="EHIME" alias="DRX016462">
        <TITLE>HEUG2XR01__ACTGGACT__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015930" refcenter="EHIME" refname="DRS015930">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002885</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACTGGACT__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACTGGACT</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016463" center_name="EHIME" alias="DRX016463">
        <TITLE>HEUG2XR01__ACTGGAGA__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015931" refcenter="EHIME" refname="DRS015931">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002928</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACTGGAGA__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACTGGAGA</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT accession="DRX016464" center_name="EHIME" alias="DRX016464">
        <TITLE>HEUG2XR01__ACTGGTCA__CYAALGF</TITLE>
        <STUDY_REF accession="DRP002286" refcenter="EHIME" refname="DRP002286">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB1856</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>DNA extraction from individual sample by a cetyl trimethyl ammonium bromide (CTAB) method.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR accession="DRS015932" refcenter="EHIME" refname="DRS015932">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00002833</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>HEUG2XR01__ACTGGTCA__CYAALGF</LIBRARY_NAME>
                <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <TARGETED_LOCI>
                    <LOCUS description="16S rRNA partial sequence including V6 region" locus_name="16S rRNA"/>
                </TARGETED_LOCI>
                <LIBRARY_CONSTRUCTION_PROTOCOL>For each sample, 16S rRNA gene were amplified using the primers CYA_ALG_F fused with the 454 pyrosequencing Adaptor A (5'-CCA TCT CAT CCC TGC GTG TCT CCG ACT CAG-3') and the 8-mer molecular ID (Hamady et al., 2008) and CYA_ALG_R with a buffer system of Ampdirect Plus (Shimadzu Corp., Kyoto, Japan) and BIOTAQ HS DNA Polymerase (Bioline, London, U.K.). Polymerase chain reaction (PCR) was conducted using a temperature profile of 95 deg C for 10 min, followed by 30 cycles at 94 deg C for 20 sec, 48 deg C for 30 sec, 72 deg C for 30 sec, and a final extension at 72 deg C for 7 min. DNA concentrations were measured using Qubit 2.0 Fluorometer (Invitrogen, Carlsbad, CA, USA) and were diluted into 4ng/uL by Milli-Q water in each PCR sample. The amplicons were pooled and purified using ExoSAP-IT (GE Healthcare, Little Chalfont, Buckinghamshire, U.K.) and a QIAquick PCR Purification Kit (Qiagen).</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Adapter</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="1" default_length="4">
                            <BASECALL>TCAG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>BarCode</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="5" default_length="8">
                            <BASECALL>ACTGGTCA</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>2</READ_INDEX>
                        <READ_CLASS>Technical Read</READ_CLASS>
                        <READ_TYPE>Primer</READ_TYPE>
                        <EXPECTED_BASECALL_TABLE base_coord="13" default_length="20">
                            <BASECALL>AAACTCAAAGRAATTGACGG</BASECALL>
                        </EXPECTED_BASECALL_TABLE>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>3</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>33</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <LS454>
                <INSTRUMENT_MODEL>454 GS Junior</INSTRUMENT_MODEL>
            </LS454>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
</EXPERIMENT_SET>
