SAMD00018976 77133 uncultured bacterium sample_title MIMARKS Survey related sample from uncultured bacterium pesticide_regm NONE chem_mutagen NONE fungicide_regm NONE growth_hormone_regm NONE description Rice were grown for 11 weeks in 1/2000 a Wagner pot. age 12 weeks after sowing env_feature root metagenome antibiotic_regm NONE non_mineral_nutr_regm NONE host Oryza sativa L. cv. Nipponbare samp_store_temp -80 height_or_length 103.7 cm host_common_name Japanese rice sample_name Bacterial community associated with rice root (control for the sulfur project) life_stage vegetative stage watering_regm Waterlogged lat_lon 38.2737 N 141.0533 E (Soil sampling site) herbicide_regm NONE host_taxid 39947 env_biome root asociated radiation_regm NONE humidity_regm NONE season_environment spring/ summer project_name Impact of sulfur fertilization on bacterial community associated with paddy rice root ph_regm NONE mechanical_damage NONE rainfall_regm Grown in a greenhouse samp_store_loc deep freezer collection_date 9-Jul air_temp_regm NONE salt_regm NONE mineral_nutr_regm NONE gaseous_environment Air fertilizer_regm NONE geo_loc_name Japan:Miyagi env_material root bioproject_id PRJDB2986 host_disease_stat NONE SAMD00018977 77133 uncultured bacterium sample_title MIMARKS Survey related sample from uncultured bacterium pesticide_regm NONE chem_mutagen NONE fungicide_regm NONE growth_hormone_regm NONE description Rice were grown for 11 weeks in 1/2000 a Wagner pot. After that, soil SNA was extracted. age 12 weeks after sowing env_feature root metagenome antibiotic_regm NONE non_mineral_nutr_regm NONE host Oryza sativa L. cv. Nipponbare samp_store_temp -80 height_or_length 106.7 cm host_common_name Japanese rice sample_name Bacterial community associated with rice root dressed with calcium carbonate life_stage vegetative stage watering_regm Waterlogged lat_lon 38.2737 N 141.0533 E (Soil sampling site) herbicide_regm NONE host_taxid 39947 env_biome root asociated radiation_regm NONE humidity_regm NONE season_environment spring/ summer project_name Impact of sulfur fertilization on bacterial community associated with paddy rice root ph_regm NONE mechanical_damage NONE rainfall_regm Grown in a greenhouse samp_store_loc deep freezer collection_date 9-Jul air_temp_regm NONE salt_regm NONE mineral_nutr_regm NONE gaseous_environment Air fertilizer_regm NONE geo_loc_name Japan:Miyagi env_material root bioproject_id PRJDB2986 host_disease_stat NONE SAMD00018978 77133 uncultured bacterium sample_title MIMARKS Survey related sample from uncultured bacterium pesticide_regm NONE chem_mutagen NONE fungicide_regm NONE growth_hormone_regm NONE description Rice were grown for 12 weeks in 1/2000 a Wagner pot. age 12 weeks after sowing env_feature root metagenome antibiotic_regm NONE non_mineral_nutr_regm NONE host Oryza sativa L. cv. Nipponbare samp_store_temp -80 height_or_length 100.5 cm host_common_name Japanese rice sample_name Bacterial community associated with rice root dressed with calcium sulfate life_stage vegetative stage watering_regm Waterlogged lat_lon 38.2737 N 141.0533 E (Soil sampling site) herbicide_regm NONE host_taxid 39947 env_biome root asociated radiation_regm NONE humidity_regm NONE season_environment spring/ summer project_name Impact of sulfur fertilization on bacterial community associated with paddy rice root ph_regm NONE mechanical_damage NONE rainfall_regm Grown in a greenhouse samp_store_loc deep freezer collection_date 9-Jul air_temp_regm NONE salt_regm NONE mineral_nutr_regm NONE gaseous_environment Air fertilizer_regm NONE geo_loc_name Japan:Miyagi env_material root bioproject_id PRJDB2986 host_disease_stat NONE SAMD00018979 77133 uncultured bacterium sample_title MIMARKS Survey related sample from uncultured bacterium description Rice were grown for 8 weeks in 1/2000 a Wagner pot with the collected soil, prior to DNA extraction from soil. env_feature rice rhizosphere (Pot experiment) sample_name Bacterial community of rice rhizosphere (control for the sulfur project) depth Unknown lat_lon 38.2737 N 141.0533 E (Soil sampling site) env_biome rhizosphere project_name Impact of sulfur fertilization on bacterial community associated with paddy rice root agrochem_addition NONE collection_date 9-Jul elev Unknown (Pot experiment) tot_nitro 0.18% fire NONE geo_loc_name Japan:Miyagi env_material rhizosphere samp_vol_we_dna_ext 0.5 g bioproject_id PRJDB2986 SAMD00018980 77133 uncultured bacterium sample_title MIMARKS Survey related sample from uncultured bacterium description Rice were grown for 8 weeks in 1/2000 a Wagner pot with the collected soil, prior to DNA extraction from soil. env_feature rice rhizosphere (Pot experiment) sample_name Bacterial community of rice rhizosphere dressed with calcium carbonate depth Unknown lat_lon 38.2737 N 141.0533 E (Soil sampling site) env_biome rhizosphere project_name Impact of sulfur fertilization on bacterial community associated with paddy rice root agrochem_addition NONE collection_date 9-Jul elev Unknown (Pot experiment) tot_nitro 0.14% fire NONE geo_loc_name Japan:Miyagi env_material rhizosphere samp_vol_we_dna_ext 0.5 g bioproject_id PRJDB2986 SAMD00018981 939928 rhizosphere metagenome sample_title MIMARKS Survey related sample from rhizosphere metagenome description Rice were grown for 8 weeks in 1/2000 a Wagner pot with the collected soil, prior to DNA extraction from soil. env_feature rice rhizosphere (Pot experiment) sample_name Bacterial community of rice rhizosphere dressed with calcium sulfate depth Unknown lat_lon 38.2737 N 141.0533 E (Soil sampling site) env_biome rhizosphere project_name Impact of sulfur fertilization on bacterial community associated with paddy rice root agrochem_addition NONE collection_date 9-Jul elev Unknown (Pot experiment) tot_nitro 0.14% fire NONE geo_loc_name Japan:Miyagi env_material rhizosphere samp_vol_we_dna_ext 0.5 g