<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<STUDY_SET>
    <STUDY accession="DRP002361" center_name="YCH" alias="DRP002361">
        <IDENTIFIERS>
            <PRIMARY_ID label="BioProject ID">PRJDB2979</PRIMARY_ID>
        </IDENTIFIERS>
        <DESCRIPTOR>
            <STUDY_TITLE>HCV NS5A sequencing</STUDY_TITLE>
            <STUDY_TYPE existing_study_type="Other"/>
            <STUDY_ABSTRACT>Recent advances in interferon-free treatment could lead to the eradication of HCV from patients infected with HCV. One of the direct-acting anti-viral agents, HCV NS5A inhibitor is available for these combination therapies. However, naturally occurring resistance-associated variants (RAVs) to HCV NS5A inhibitors in treatment-na?ve patients with chronic hepatitis C are still unknown. Here, we performed ultra-deep sequencing and analyzed previously reported RAVs in a total 132 HCV genotype 1b-infected Japanese patients who had never used HCV NS5A inhibitors. We also performed direct-sequencing by Sanger method and examined the differences between the results of the two methods.</STUDY_ABSTRACT>
            <CENTER_PROJECT_NAME>HCV NS5A sequencing</CENTER_PROJECT_NAME>
            <RELATED_STUDIES>
                <RELATED_STUDY>
                    <RELATED_LINK>
                        <DB>bioproject</DB>
                        <ID>PRJDB2979</ID>
                        <LABEL>PRJDB2979</LABEL>
                    </RELATED_LINK>
                    <IS_PRIMARY>true</IS_PRIMARY>
                </RELATED_STUDY>
            </RELATED_STUDIES>
            <STUDY_DESCRIPTION>Recent advances in interferon-free treatment could lead to the eradication of HCV from patients infected with HCV. One of the direct-acting anti-viral agents, HCV NS5A inhibitor is available for these combination therapies. However, naturally occurring resistance-associated variants (RAVs) to HCV NS5A inhibitors in treatment-na?ve patients with chronic hepatitis C are still unknown. Here, we performed ultra-deep sequencing and analyzed previously reported RAVs in a total 132 HCV genotype 1b-infected Japanese patients who had never used HCV NS5A inhibitors. We also performed direct-sequencing by Sanger method and examined the differences between the results of the two methods.</STUDY_DESCRIPTION>
        </DESCRIPTOR>
    </STUDY>
</STUDY_SET>
