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                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
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        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
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        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
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            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
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            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
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        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
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        <TITLE>LShi10008_ACAGTG-CGATCTG.experiment</TITLE>
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        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
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        <TITLE>LShi10008_ACAGTG-CGATGCA.experiment</TITLE>
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            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
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            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
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            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
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            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
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        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
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            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
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            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
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            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
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            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
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            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
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                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
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            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
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            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
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            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
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            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
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        <TITLE>LShi10008_ACAGTG-GTGACTC.experiment</TITLE>
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        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
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        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
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            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
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            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
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        <TITLE>LShi10008_ACAGTG-TAGCGAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
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        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270779" refcenter="RIKEN_CLST_DGT" accession="DRS270779">
                <IDENTIFIERS>
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                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
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            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
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        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
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            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
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            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271168" refcenter="RIKEN_CLST_DGT" accession="DRS271168">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452150</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACAGTG-TATGCAC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344410" center_name="RIKEN_CLST_DGT" accession="DRX344410">
        <TITLE>LShi10008_ACAGTG-TCACAGT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270964" refcenter="RIKEN_CLST_DGT" accession="DRS270964">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451946</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACAGTG-TCACAGT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
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            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344411" center_name="RIKEN_CLST_DGT" accession="DRX344411">
        <TITLE>LShi10008_ACAGTG-TCACGTG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271132" refcenter="RIKEN_CLST_DGT" accession="DRS271132">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452114</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACAGTG-TCACGTG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344412" center_name="RIKEN_CLST_DGT" accession="DRX344412">
        <TITLE>LShi10008_ACAGTG-TCGATAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270712" refcenter="RIKEN_CLST_DGT" accession="DRS270712">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451694</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACAGTG-TCGATAG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344413" center_name="RIKEN_CLST_DGT" accession="DRX344413">
        <TITLE>LShi10008_ACAGTG-TCGATCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270711" refcenter="RIKEN_CLST_DGT" accession="DRS270711">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451693</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACAGTG-TCGATCA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344414" center_name="RIKEN_CLST_DGT" accession="DRX344414">
        <TITLE>LShi10008_ACAGTG-TCGCTGA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270656" refcenter="RIKEN_CLST_DGT" accession="DRS270656">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451638</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACAGTG-TCGCTGA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344415" center_name="RIKEN_CLST_DGT" accession="DRX344415">
        <TITLE>LShi10008_ACAGTG-TCGTGAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270627" refcenter="RIKEN_CLST_DGT" accession="DRS270627">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451609</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACAGTG-TCGTGAC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344416" center_name="RIKEN_CLST_DGT" accession="DRX344416">
        <TITLE>LShi10008_ACAGTG-TCTCGAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270961" refcenter="RIKEN_CLST_DGT" accession="DRS270961">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451943</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACAGTG-TCTCGAG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344417" center_name="RIKEN_CLST_DGT" accession="DRX344417">
        <TITLE>LShi10008_ACAGTG-TGACTCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271131" refcenter="RIKEN_CLST_DGT" accession="DRS271131">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452113</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACAGTG-TGACTCA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344418" center_name="RIKEN_CLST_DGT" accession="DRX344418">
        <TITLE>LShi10008_ACAGTG-TGATCAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270714" refcenter="RIKEN_CLST_DGT" accession="DRS270714">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451696</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACAGTG-TGATCAC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344419" center_name="RIKEN_CLST_DGT" accession="DRX344419">
        <TITLE>LShi10008_ACAGTG-TGCTACA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271170" refcenter="RIKEN_CLST_DGT" accession="DRS271170">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452152</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACAGTG-TGCTACA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344420" center_name="RIKEN_CLST_DGT" accession="DRX344420">
        <TITLE>LShi10008_ACAGTG-TGTCACG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271161" refcenter="RIKEN_CLST_DGT" accession="DRS271161">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452143</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACAGTG-TGTCACG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344421" center_name="RIKEN_CLST_DGT" accession="DRX344421">
        <TITLE>LShi10008_ACAGTG-TGTCAGA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271133" refcenter="RIKEN_CLST_DGT" accession="DRS271133">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452115</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACAGTG-TGTCAGA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344422" center_name="RIKEN_CLST_DGT" accession="DRX344422">
        <TITLE>LShi10008_ACAGTG-TGTCGAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271098" refcenter="RIKEN_CLST_DGT" accession="DRS271098">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452080</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACAGTG-TGTCGAC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344423" center_name="RIKEN_CLST_DGT" accession="DRX344423">
        <TITLE>LShi10008_ACAGTG-TGTCGCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270780" refcenter="RIKEN_CLST_DGT" accession="DRS270780">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451762</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACAGTG-TGTCGCA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344424" center_name="RIKEN_CLST_DGT" accession="DRX344424">
        <TITLE>LShi10008_ACTTGA-ACAGCTG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270905" refcenter="RIKEN_CLST_DGT" accession="DRS270905">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451887</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-ACAGCTG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344425" center_name="RIKEN_CLST_DGT" accession="DRX344425">
        <TITLE>LShi10008_ACTTGA-ACATGTC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270904" refcenter="RIKEN_CLST_DGT" accession="DRS270904">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451886</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-ACATGTC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344426" center_name="RIKEN_CLST_DGT" accession="DRX344426">
        <TITLE>LShi10008_ACTTGA-ACGATCG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270768" refcenter="RIKEN_CLST_DGT" accession="DRS270768">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451750</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-ACGATCG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344427" center_name="RIKEN_CLST_DGT" accession="DRX344427">
        <TITLE>LShi10008_ACTTGA-ACGTCGA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271004" refcenter="RIKEN_CLST_DGT" accession="DRS271004">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451986</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-ACGTCGA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344428" center_name="RIKEN_CLST_DGT" accession="DRX344428">
        <TITLE>LShi10008_ACTTGA-ACTATGC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270899" refcenter="RIKEN_CLST_DGT" accession="DRS270899">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451881</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-ACTATGC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344429" center_name="RIKEN_CLST_DGT" accession="DRX344429">
        <TITLE>LShi10008_ACTTGA-ACTGCAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270898" refcenter="RIKEN_CLST_DGT" accession="DRS270898">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451880</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-ACTGCAG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344430" center_name="RIKEN_CLST_DGT" accession="DRX344430">
        <TITLE>LShi10008_ACTTGA-AGACGCT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270817" refcenter="RIKEN_CLST_DGT" accession="DRS270817">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451799</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-AGACGCT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344431" center_name="RIKEN_CLST_DGT" accession="DRX344431">
        <TITLE>LShi10008_ACTTGA-AGCATCG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270857" refcenter="RIKEN_CLST_DGT" accession="DRS270857">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451839</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-AGCATCG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344432" center_name="RIKEN_CLST_DGT" accession="DRX344432">
        <TITLE>LShi10008_ACTTGA-AGCATGC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270903" refcenter="RIKEN_CLST_DGT" accession="DRS270903">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451885</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-AGCATGC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344433" center_name="RIKEN_CLST_DGT" accession="DRX344433">
        <TITLE>LShi10008_ACTTGA-AGCTCAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270900" refcenter="RIKEN_CLST_DGT" accession="DRS270900">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451882</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-AGCTCAG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344434" center_name="RIKEN_CLST_DGT" accession="DRX344434">
        <TITLE>LShi10008_ACTTGA-AGCTCGA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270988" refcenter="RIKEN_CLST_DGT" accession="DRS270988">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451970</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-AGCTCGA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344435" center_name="RIKEN_CLST_DGT" accession="DRX344435">
        <TITLE>LShi10008_ACTTGA-AGTACGC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270907" refcenter="RIKEN_CLST_DGT" accession="DRS270907">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451889</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-AGTACGC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344436" center_name="RIKEN_CLST_DGT" accession="DRX344436">
        <TITLE>LShi10008_ACTTGA-AGTCAGT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271007" refcenter="RIKEN_CLST_DGT" accession="DRS271007">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451989</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-AGTCAGT</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
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                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
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                        <BASE_COORD>52</BASE_COORD>
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                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
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        <PLATFORM>
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                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
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        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
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        </PROCESSING>
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    <EXPERIMENT alias="DRX344437" center_name="RIKEN_CLST_DGT" accession="DRX344437">
        <TITLE>LShi10008_ACTTGA-AGTGTCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271094" refcenter="RIKEN_CLST_DGT" accession="DRS271094">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452076</PRIMARY_ID>
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                <LIBRARY_NAME>LShi10008_ACTTGA-AGTGTCA</LIBRARY_NAME>
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                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
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                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
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                        <BASE_COORD>52</BASE_COORD>
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        <PLATFORM>
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        <PROCESSING>
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                <PIPE_SECTION>
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    <EXPERIMENT alias="DRX344438" center_name="RIKEN_CLST_DGT" accession="DRX344438">
        <TITLE>LShi10008_ACTTGA-ATACGTC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271036" refcenter="RIKEN_CLST_DGT" accession="DRS271036">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452018</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-ATACGTC</LIBRARY_NAME>
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                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
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            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344439" center_name="RIKEN_CLST_DGT" accession="DRX344439">
        <TITLE>LShi10008_ACTTGA-ATCAGCG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270669" refcenter="RIKEN_CLST_DGT" accession="DRS270669">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451651</PRIMARY_ID>
                </IDENTIFIERS>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-ATCAGCG</LIBRARY_NAME>
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                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
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                        <BASE_COORD>52</BASE_COORD>
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                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
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                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344440" center_name="RIKEN_CLST_DGT" accession="DRX344440">
        <TITLE>LShi10008_ACTTGA-ATGCACT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
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        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270696" refcenter="RIKEN_CLST_DGT" accession="DRS270696">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451678</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-ATGCACT</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
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                        <BASE_COORD>52</BASE_COORD>
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        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344441" center_name="RIKEN_CLST_DGT" accession="DRX344441">
        <TITLE>LShi10008_ACTTGA-ATGCGCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270670" refcenter="RIKEN_CLST_DGT" accession="DRS270670">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451652</PRIMARY_ID>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
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            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
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                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344442" center_name="RIKEN_CLST_DGT" accession="DRX344442">
        <TITLE>LShi10008_ACTTGA-ATGTCAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271072" refcenter="RIKEN_CLST_DGT" accession="DRS271072">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452054</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-ATGTCAG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
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        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344443" center_name="RIKEN_CLST_DGT" accession="DRX344443">
        <TITLE>LShi10008_ACTTGA-CACGTGT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271035" refcenter="RIKEN_CLST_DGT" accession="DRS271035">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452017</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-CACGTGT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
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            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344444" center_name="RIKEN_CLST_DGT" accession="DRX344444">
        <TITLE>LShi10008_ACTTGA-CACTAGT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271076" refcenter="RIKEN_CLST_DGT" accession="DRS271076">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452058</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-CACTAGT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
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            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
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            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344445" center_name="RIKEN_CLST_DGT" accession="DRX344445">
        <TITLE>LShi10008_ACTTGA-CACTATG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
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        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270801" refcenter="RIKEN_CLST_DGT" accession="DRS270801">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451783</PRIMARY_ID>
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            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-CACTATG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
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                        <BASE_COORD>52</BASE_COORD>
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                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
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                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
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                <PIPE_SECTION>
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                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344446" center_name="RIKEN_CLST_DGT" accession="DRX344446">
        <TITLE>LShi10008_ACTTGA-CAGATCT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270986" refcenter="RIKEN_CLST_DGT" accession="DRS270986">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451968</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
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    <EXPERIMENT alias="DRX344447" center_name="RIKEN_CLST_DGT" accession="DRX344447">
        <TITLE>LShi10008_ACTTGA-CAGCAGT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
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        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270985" refcenter="RIKEN_CLST_DGT" accession="DRS270985">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451967</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-CAGCAGT</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
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                        <READ_TYPE>Forward</READ_TYPE>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
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        </DESIGN>
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                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
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        </PLATFORM>
        <PROCESSING>
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                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344448" center_name="RIKEN_CLST_DGT" accession="DRX344448">
        <TITLE>LShi10008_ACTTGA-CAGTCTG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270729" refcenter="RIKEN_CLST_DGT" accession="DRS270729">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451711</PRIMARY_ID>
                </IDENTIFIERS>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-CAGTCTG</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
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                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
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                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
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        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
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            </PIPELINE>
        </PROCESSING>
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    <EXPERIMENT alias="DRX344449" center_name="RIKEN_CLST_DGT" accession="DRX344449">
        <TITLE>LShi10008_ACTTGA-CAGTGTC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270727" refcenter="RIKEN_CLST_DGT" accession="DRS270727">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451709</PRIMARY_ID>
                </IDENTIFIERS>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-CAGTGTC</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
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                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344450" center_name="RIKEN_CLST_DGT" accession="DRX344450">
        <TITLE>LShi10008_ACTTGA-CATAGCT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271006" refcenter="RIKEN_CLST_DGT" accession="DRS271006">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451988</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-CATAGCT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
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                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344451" center_name="RIKEN_CLST_DGT" accession="DRX344451">
        <TITLE>LShi10008_ACTTGA-CATATCG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270982" refcenter="RIKEN_CLST_DGT" accession="DRS270982">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451964</PRIMARY_ID>
                </IDENTIFIERS>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-CATATCG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
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                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344452" center_name="RIKEN_CLST_DGT" accession="DRX344452">
        <TITLE>LShi10008_ACTTGA-CGACGAT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270667" refcenter="RIKEN_CLST_DGT" accession="DRS270667">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451649</PRIMARY_ID>
                </IDENTIFIERS>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-CGACGAT</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
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                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
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                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
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            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
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        <TITLE>LShi10008_ACTTGA-CGACGTA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
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        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271037" refcenter="RIKEN_CLST_DGT" accession="DRS271037">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452019</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
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        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344454" center_name="RIKEN_CLST_DGT" accession="DRX344454">
        <TITLE>LShi10008_ACTTGA-CGACTGT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
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        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270854" refcenter="RIKEN_CLST_DGT" accession="DRS270854">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451836</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-CGACTGT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
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                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344455" center_name="RIKEN_CLST_DGT" accession="DRX344455">
        <TITLE>LShi10008_ACTTGA-CGATCTG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270633" refcenter="RIKEN_CLST_DGT" accession="DRS270633">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451615</PRIMARY_ID>
                </IDENTIFIERS>
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            <LIBRARY_DESCRIPTOR>
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                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
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                        <BASE_COORD>52</BASE_COORD>
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                </SPOT_DECODE_SPEC>
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        </DESIGN>
        <PLATFORM>
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                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
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        <PROCESSING>
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                <PIPE_SECTION>
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        </PROCESSING>
    </EXPERIMENT>
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        <TITLE>LShi10008_ACTTGA-CGATGCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271077" refcenter="RIKEN_CLST_DGT" accession="DRS271077">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452059</PRIMARY_ID>
                </IDENTIFIERS>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-CGATGCA</LIBRARY_NAME>
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                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344457" center_name="RIKEN_CLST_DGT" accession="DRX344457">
        <TITLE>LShi10008_ACTTGA-CGTACAT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271070" refcenter="RIKEN_CLST_DGT" accession="DRS271070">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452052</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-CGTACAT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344458" center_name="RIKEN_CLST_DGT" accession="DRX344458">
        <TITLE>LShi10008_ACTTGA-CGTACTG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270683" refcenter="RIKEN_CLST_DGT" accession="DRS270683">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451665</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-CGTACTG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344459" center_name="RIKEN_CLST_DGT" accession="DRX344459">
        <TITLE>LShi10008_ACTTGA-CGTCATA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270855" refcenter="RIKEN_CLST_DGT" accession="DRS270855">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451837</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-CGTCATA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344460" center_name="RIKEN_CLST_DGT" accession="DRX344460">
        <TITLE>LShi10008_ACTTGA-CTAGCTG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270856" refcenter="RIKEN_CLST_DGT" accession="DRS270856">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451838</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-CTAGCTG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344461" center_name="RIKEN_CLST_DGT" accession="DRX344461">
        <TITLE>LShi10008_ACTTGA-CTAGTAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270901" refcenter="RIKEN_CLST_DGT" accession="DRS270901">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451883</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-CTAGTAC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344462" center_name="RIKEN_CLST_DGT" accession="DRX344462">
        <TITLE>LShi10008_ACTTGA-CTAGTCG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270816" refcenter="RIKEN_CLST_DGT" accession="DRS270816">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451798</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-CTAGTCG</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344463" center_name="RIKEN_CLST_DGT" accession="DRX344463">
        <TITLE>LShi10008_ACTTGA-CTATGCG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270954" refcenter="RIKEN_CLST_DGT" accession="DRS270954">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451936</PRIMARY_ID>
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            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-CTATGCG</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344464" center_name="RIKEN_CLST_DGT" accession="DRX344464">
        <TITLE>LShi10008_ACTTGA-CTCAGAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270796" refcenter="RIKEN_CLST_DGT" accession="DRS270796">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451778</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-CTCAGAG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344465" center_name="RIKEN_CLST_DGT" accession="DRX344465">
        <TITLE>LShi10008_ACTTGA-CTCGATA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271042" refcenter="RIKEN_CLST_DGT" accession="DRS271042">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452024</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-CTCGATA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344466" center_name="RIKEN_CLST_DGT" accession="DRX344466">
        <TITLE>LShi10008_ACTTGA-CTGATAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270766" refcenter="RIKEN_CLST_DGT" accession="DRS270766">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451748</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-CTGATAG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344467" center_name="RIKEN_CLST_DGT" accession="DRX344467">
        <TITLE>LShi10008_ACTTGA-CTGATGC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270901" refcenter="RIKEN_CLST_DGT" accession="DRS270901">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451883</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-CTGATGC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344468" center_name="RIKEN_CLST_DGT" accession="DRX344468">
        <TITLE>LShi10008_ACTTGA-GACACTG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270728" refcenter="RIKEN_CLST_DGT" accession="DRS270728">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451710</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-GACACTG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344469" center_name="RIKEN_CLST_DGT" accession="DRX344469">
        <TITLE>LShi10008_ACTTGA-GACATCG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270814" refcenter="RIKEN_CLST_DGT" accession="DRS270814">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451796</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-GACATCG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344470" center_name="RIKEN_CLST_DGT" accession="DRX344470">
        <TITLE>LShi10008_ACTTGA-GACTACT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271042" refcenter="RIKEN_CLST_DGT" accession="DRS271042">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452024</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-GACTACT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344471" center_name="RIKEN_CLST_DGT" accession="DRX344471">
        <TITLE>LShi10008_ACTTGA-GACTAGC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270812" refcenter="RIKEN_CLST_DGT" accession="DRS270812">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451794</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-GACTAGC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344472" center_name="RIKEN_CLST_DGT" accession="DRX344472">
        <TITLE>LShi10008_ACTTGA-GAGCTCT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270906" refcenter="RIKEN_CLST_DGT" accession="DRS270906">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451888</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-GAGCTCT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344473" center_name="RIKEN_CLST_DGT" accession="DRX344473">
        <TITLE>LShi10008_ACTTGA-GATATGC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270798" refcenter="RIKEN_CLST_DGT" accession="DRS270798">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451780</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-GATATGC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344474" center_name="RIKEN_CLST_DGT" accession="DRX344474">
        <TITLE>LShi10008_ACTTGA-GATCACG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270957" refcenter="RIKEN_CLST_DGT" accession="DRS270957">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451939</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-GATCACG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344475" center_name="RIKEN_CLST_DGT" accession="DRX344475">
        <TITLE>LShi10008_ACTTGA-GATCGCT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270897" refcenter="RIKEN_CLST_DGT" accession="DRS270897">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451879</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-GATCGCT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344476" center_name="RIKEN_CLST_DGT" accession="DRX344476">
        <TITLE>LShi10008_ACTTGA-GATCTCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270956" refcenter="RIKEN_CLST_DGT" accession="DRS270956">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451938</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-GATCTCA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344477" center_name="RIKEN_CLST_DGT" accession="DRX344477">
        <TITLE>LShi10008_ACTTGA-GATGCAT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271043" refcenter="RIKEN_CLST_DGT" accession="DRS271043">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452025</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-GATGCAT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344478" center_name="RIKEN_CLST_DGT" accession="DRX344478">
        <TITLE>LShi10008_ACTTGA-GCAGACT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270813" refcenter="RIKEN_CLST_DGT" accession="DRS270813">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451795</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-GCAGACT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344479" center_name="RIKEN_CLST_DGT" accession="DRX344479">
        <TITLE>LShi10008_ACTTGA-GCATATG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270799" refcenter="RIKEN_CLST_DGT" accession="DRS270799">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451781</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-GCATATG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344480" center_name="RIKEN_CLST_DGT" accession="DRX344480">
        <TITLE>LShi10008_ACTTGA-GCGTATA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270983" refcenter="RIKEN_CLST_DGT" accession="DRS270983">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451965</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-GCGTATA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344481" center_name="RIKEN_CLST_DGT" accession="DRX344481">
        <TITLE>LShi10008_ACTTGA-GCTACGA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270987" refcenter="RIKEN_CLST_DGT" accession="DRS270987">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451969</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-GCTACGA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344482" center_name="RIKEN_CLST_DGT" accession="DRX344482">
        <TITLE>LShi10008_ACTTGA-GCTAGCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270688" refcenter="RIKEN_CLST_DGT" accession="DRS270688">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451670</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-GCTAGCA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344483" center_name="RIKEN_CLST_DGT" accession="DRX344483">
        <TITLE>LShi10008_ACTTGA-GCTATAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270984" refcenter="RIKEN_CLST_DGT" accession="DRS270984">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451966</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-GCTATAG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344484" center_name="RIKEN_CLST_DGT" accession="DRX344484">
        <TITLE>LShi10008_ACTTGA-GCTCATG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271034" refcenter="RIKEN_CLST_DGT" accession="DRS271034">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452016</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-GCTCATG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344485" center_name="RIKEN_CLST_DGT" accession="DRX344485">
        <TITLE>LShi10008_ACTTGA-GCTGTAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271073" refcenter="RIKEN_CLST_DGT" accession="DRS271073">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452055</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-GCTGTAC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344486" center_name="RIKEN_CLST_DGT" accession="DRX344486">
        <TITLE>LShi10008_ACTTGA-GTACATG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271075" refcenter="RIKEN_CLST_DGT" accession="DRS271075">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452057</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-GTACATG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344487" center_name="RIKEN_CLST_DGT" accession="DRX344487">
        <TITLE>LShi10008_ACTTGA-GTAGCAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270769" refcenter="RIKEN_CLST_DGT" accession="DRS270769">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451751</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-GTAGCAC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344488" center_name="RIKEN_CLST_DGT" accession="DRX344488">
        <TITLE>LShi10008_ACTTGA-GTATAGC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270770" refcenter="RIKEN_CLST_DGT" accession="DRS270770">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451752</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-GTATAGC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344489" center_name="RIKEN_CLST_DGT" accession="DRX344489">
        <TITLE>LShi10008_ACTTGA-GTCACAT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271093" refcenter="RIKEN_CLST_DGT" accession="DRS271093">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452075</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-GTCACAT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344490" center_name="RIKEN_CLST_DGT" accession="DRX344490">
        <TITLE>LShi10008_ACTTGA-GTGACTC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271071" refcenter="RIKEN_CLST_DGT" accession="DRS271071">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452053</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-GTGACTC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344491" center_name="RIKEN_CLST_DGT" accession="DRX344491">
        <TITLE>LShi10008_ACTTGA-GTGCATA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270955" refcenter="RIKEN_CLST_DGT" accession="DRS270955">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451937</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-GTGCATA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344492" center_name="RIKEN_CLST_DGT" accession="DRX344492">
        <TITLE>LShi10008_ACTTGA-TACGCGT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271095" refcenter="RIKEN_CLST_DGT" accession="DRS271095">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452077</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-TACGCGT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344493" center_name="RIKEN_CLST_DGT" accession="DRX344493">
        <TITLE>LShi10008_ACTTGA-TACGCTA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270724" refcenter="RIKEN_CLST_DGT" accession="DRS270724">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451706</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-TACGCTA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344494" center_name="RIKEN_CLST_DGT" accession="DRX344494">
        <TITLE>LShi10008_ACTTGA-TACGTAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270695" refcenter="RIKEN_CLST_DGT" accession="DRS270695">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451677</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-TACGTAG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344495" center_name="RIKEN_CLST_DGT" accession="DRX344495">
        <TITLE>LShi10008_ACTTGA-TACGTCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271041" refcenter="RIKEN_CLST_DGT" accession="DRS271041">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452023</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-TACGTCA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344496" center_name="RIKEN_CLST_DGT" accession="DRX344496">
        <TITLE>LShi10008_ACTTGA-TACTGAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271005" refcenter="RIKEN_CLST_DGT" accession="DRS271005">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451987</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-TACTGAG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344497" center_name="RIKEN_CLST_DGT" accession="DRX344497">
        <TITLE>LShi10008_ACTTGA-TAGCATC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271092" refcenter="RIKEN_CLST_DGT" accession="DRS271092">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452074</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-TAGCATC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344498" center_name="RIKEN_CLST_DGT" accession="DRX344498">
        <TITLE>LShi10008_ACTTGA-TAGCGAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270725" refcenter="RIKEN_CLST_DGT" accession="DRS270725">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451707</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-TAGCGAC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344499" center_name="RIKEN_CLST_DGT" accession="DRX344499">
        <TITLE>LShi10008_ACTTGA-TAGCGTA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270692" refcenter="RIKEN_CLST_DGT" accession="DRS270692">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451674</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-TAGCGTA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344500" center_name="RIKEN_CLST_DGT" accession="DRX344500">
        <TITLE>LShi10008_ACTTGA-TAGCTCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271074" refcenter="RIKEN_CLST_DGT" accession="DRS271074">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452056</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-TAGCTCA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
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                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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                    <PROGRAM></PROGRAM>
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                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344501" center_name="RIKEN_CLST_DGT" accession="DRX344501">
        <TITLE>LShi10008_ACTTGA-TAGTCAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270632" refcenter="RIKEN_CLST_DGT" accession="DRS270632">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451614</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-TAGTCAC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344502" center_name="RIKEN_CLST_DGT" accession="DRX344502">
        <TITLE>LShi10008_ACTTGA-TATGCAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270687" refcenter="RIKEN_CLST_DGT" accession="DRS270687">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451669</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-TATGCAC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344503" center_name="RIKEN_CLST_DGT" accession="DRX344503">
        <TITLE>LShi10008_ACTTGA-TCACAGT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270902" refcenter="RIKEN_CLST_DGT" accession="DRS270902">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451884</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-TCACAGT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344504" center_name="RIKEN_CLST_DGT" accession="DRX344504">
        <TITLE>LShi10008_ACTTGA-TCACGTG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270980" refcenter="RIKEN_CLST_DGT" accession="DRS270980">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451962</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-TCACGTG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344505" center_name="RIKEN_CLST_DGT" accession="DRX344505">
        <TITLE>LShi10008_ACTTGA-TCGATAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271079" refcenter="RIKEN_CLST_DGT" accession="DRS271079">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452061</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-TCGATAG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344506" center_name="RIKEN_CLST_DGT" accession="DRX344506">
        <TITLE>LShi10008_ACTTGA-TCGATCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271078" refcenter="RIKEN_CLST_DGT" accession="DRS271078">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452060</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-TCGATCA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344507" center_name="RIKEN_CLST_DGT" accession="DRX344507">
        <TITLE>LShi10008_ACTTGA-TCGCTGA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270668" refcenter="RIKEN_CLST_DGT" accession="DRS270668">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451650</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-TCGCTGA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344508" center_name="RIKEN_CLST_DGT" accession="DRX344508">
        <TITLE>LShi10008_ACTTGA-TCGTGAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270797" refcenter="RIKEN_CLST_DGT" accession="DRS270797">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451779</PRIMARY_ID>
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            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-TCGTGAC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
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                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344509" center_name="RIKEN_CLST_DGT" accession="DRX344509">
        <TITLE>LShi10008_ACTTGA-TCTCGAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270815" refcenter="RIKEN_CLST_DGT" accession="DRS270815">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451797</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-TCTCGAG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344510" center_name="RIKEN_CLST_DGT" accession="DRX344510">
        <TITLE>LShi10008_ACTTGA-TGACTCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270771" refcenter="RIKEN_CLST_DGT" accession="DRS270771">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451753</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-TGACTCA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344511" center_name="RIKEN_CLST_DGT" accession="DRX344511">
        <TITLE>LShi10008_ACTTGA-TGACTGC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270989" refcenter="RIKEN_CLST_DGT" accession="DRS270989">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451971</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-TGACTGC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344512" center_name="RIKEN_CLST_DGT" accession="DRX344512">
        <TITLE>LShi10008_ACTTGA-TGATCAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270767" refcenter="RIKEN_CLST_DGT" accession="DRS270767">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451749</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-TGATCAC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344513" center_name="RIKEN_CLST_DGT" accession="DRX344513">
        <TITLE>LShi10008_ACTTGA-TGCTACA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270691" refcenter="RIKEN_CLST_DGT" accession="DRS270691">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451673</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-TGCTACA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344514" center_name="RIKEN_CLST_DGT" accession="DRX344514">
        <TITLE>LShi10008_ACTTGA-TGTCACG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270684" refcenter="RIKEN_CLST_DGT" accession="DRS270684">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451666</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-TGTCACG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344515" center_name="RIKEN_CLST_DGT" accession="DRX344515">
        <TITLE>LShi10008_ACTTGA-TGTCAGA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270981" refcenter="RIKEN_CLST_DGT" accession="DRS270981">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451963</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-TGTCAGA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344516" center_name="RIKEN_CLST_DGT" accession="DRX344516">
        <TITLE>LShi10008_ACTTGA-TGTCGAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270800" refcenter="RIKEN_CLST_DGT" accession="DRS270800">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451782</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-TGTCGAC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344517" center_name="RIKEN_CLST_DGT" accession="DRX344517">
        <TITLE>LShi10008_ACTTGA-TGTCGCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270726" refcenter="RIKEN_CLST_DGT" accession="DRS270726">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451708</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_ACTTGA-TGTCGCA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344518" center_name="RIKEN_CLST_DGT" accession="DRX344518">
        <TITLE>LShi10008_CAGATC-ACAGCTG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271019" refcenter="RIKEN_CLST_DGT" accession="DRS271019">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452001</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-ACAGCTG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344519" center_name="RIKEN_CLST_DGT" accession="DRX344519">
        <TITLE>LShi10008_CAGATC-ACATGTC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271018" refcenter="RIKEN_CLST_DGT" accession="DRS271018">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452000</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-ACATGTC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344520" center_name="RIKEN_CLST_DGT" accession="DRX344520">
        <TITLE>LShi10008_CAGATC-ACGTCGA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270754" refcenter="RIKEN_CLST_DGT" accession="DRS270754">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451736</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-ACGTCGA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344521" center_name="RIKEN_CLST_DGT" accession="DRX344521">
        <TITLE>LShi10008_CAGATC-ACTATGC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271002" refcenter="RIKEN_CLST_DGT" accession="DRS271002">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451984</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-ACTATGC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344522" center_name="RIKEN_CLST_DGT" accession="DRX344522">
        <TITLE>LShi10008_CAGATC-ACTGCAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271001" refcenter="RIKEN_CLST_DGT" accession="DRS271001">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451983</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-ACTGCAG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344523" center_name="RIKEN_CLST_DGT" accession="DRX344523">
        <TITLE>LShi10008_CAGATC-AGACGCT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271059" refcenter="RIKEN_CLST_DGT" accession="DRS271059">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452041</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-AGACGCT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344524" center_name="RIKEN_CLST_DGT" accession="DRX344524">
        <TITLE>LShi10008_CAGATC-AGCATCG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270753" refcenter="RIKEN_CLST_DGT" accession="DRS270753">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451735</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-AGCATCG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344525" center_name="RIKEN_CLST_DGT" accession="DRX344525">
        <TITLE>LShi10008_CAGATC-AGCATGC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271017" refcenter="RIKEN_CLST_DGT" accession="DRS271017">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451999</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-AGCATGC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344526" center_name="RIKEN_CLST_DGT" accession="DRX344526">
        <TITLE>LShi10008_CAGATC-AGCTCAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271003" refcenter="RIKEN_CLST_DGT" accession="DRS271003">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451985</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-AGCTCAG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344527" center_name="RIKEN_CLST_DGT" accession="DRX344527">
        <TITLE>LShi10008_CAGATC-AGCTCGA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270836" refcenter="RIKEN_CLST_DGT" accession="DRS270836">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451818</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-AGCTCGA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344528" center_name="RIKEN_CLST_DGT" accession="DRX344528">
        <TITLE>LShi10008_CAGATC-AGTACGC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270763" refcenter="RIKEN_CLST_DGT" accession="DRS270763">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451745</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-AGTACGC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344529" center_name="RIKEN_CLST_DGT" accession="DRX344529">
        <TITLE>LShi10008_CAGATC-AGTCAGT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270999" refcenter="RIKEN_CLST_DGT" accession="DRS270999">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451981</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-AGTCAGT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344530" center_name="RIKEN_CLST_DGT" accession="DRX344530">
        <TITLE>LShi10008_CAGATC-AGTGTCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270990" refcenter="RIKEN_CLST_DGT" accession="DRS270990">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451972</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-AGTGTCA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344531" center_name="RIKEN_CLST_DGT" accession="DRX344531">
        <TITLE>LShi10008_CAGATC-ATACGTC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270826" refcenter="RIKEN_CLST_DGT" accession="DRS270826">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451808</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-ATACGTC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344532" center_name="RIKEN_CLST_DGT" accession="DRX344532">
        <TITLE>LShi10008_CAGATC-ATCAGCG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270665" refcenter="RIKEN_CLST_DGT" accession="DRS270665">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451647</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-ATCAGCG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344533" center_name="RIKEN_CLST_DGT" accession="DRX344533">
        <TITLE>LShi10008_CAGATC-ATGCACT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270635" refcenter="RIKEN_CLST_DGT" accession="DRS270635">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451617</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-ATGCACT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344534" center_name="RIKEN_CLST_DGT" accession="DRX344534">
        <TITLE>LShi10008_CAGATC-ATGCGCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270666" refcenter="RIKEN_CLST_DGT" accession="DRS270666">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451648</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-ATGCGCA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344535" center_name="RIKEN_CLST_DGT" accession="DRX344535">
        <TITLE>LShi10008_CAGATC-ATGTCAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270970" refcenter="RIKEN_CLST_DGT" accession="DRS270970">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451952</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-ATGTCAG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344536" center_name="RIKEN_CLST_DGT" accession="DRX344536">
        <TITLE>LShi10008_CAGATC-CACGTGT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270825" refcenter="RIKEN_CLST_DGT" accession="DRS270825">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451807</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-CACGTGT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
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            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344537" center_name="RIKEN_CLST_DGT" accession="DRX344537">
        <TITLE>LShi10008_CAGATC-CACTAGT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271010" refcenter="RIKEN_CLST_DGT" accession="DRS271010">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451992</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-CACTAGT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344538" center_name="RIKEN_CLST_DGT" accession="DRX344538">
        <TITLE>LShi10008_CAGATC-CACTATG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271040" refcenter="RIKEN_CLST_DGT" accession="DRS271040">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452022</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-CACTATG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344539" center_name="RIKEN_CLST_DGT" accession="DRX344539">
        <TITLE>LShi10008_CAGATC-CAGATCT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270834" refcenter="RIKEN_CLST_DGT" accession="DRS270834">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451816</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-CAGATCT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344540" center_name="RIKEN_CLST_DGT" accession="DRX344540">
        <TITLE>LShi10008_CAGATC-CAGCAGT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270829" refcenter="RIKEN_CLST_DGT" accession="DRS270829">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451811</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-CAGCAGT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344541" center_name="RIKEN_CLST_DGT" accession="DRX344541">
        <TITLE>LShi10008_CAGATC-CAGTCTG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271107" refcenter="RIKEN_CLST_DGT" accession="DRS271107">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452089</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-CAGTCTG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344542" center_name="RIKEN_CLST_DGT" accession="DRX344542">
        <TITLE>LShi10008_CAGATC-CAGTGTC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271105" refcenter="RIKEN_CLST_DGT" accession="DRS271105">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452087</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-CAGTGTC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344543" center_name="RIKEN_CLST_DGT" accession="DRX344543">
        <TITLE>LShi10008_CAGATC-CATAGCT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270998" refcenter="RIKEN_CLST_DGT" accession="DRS270998">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451980</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-CATAGCT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344544" center_name="RIKEN_CLST_DGT" accession="DRX344544">
        <TITLE>LShi10008_CAGATC-CATATCG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270936" refcenter="RIKEN_CLST_DGT" accession="DRS270936">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451918</PRIMARY_ID>
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            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-CATATCG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344545" center_name="RIKEN_CLST_DGT" accession="DRX344545">
        <TITLE>LShi10008_CAGATC-CGACGAT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270663" refcenter="RIKEN_CLST_DGT" accession="DRS270663">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451645</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-CGACGAT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
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                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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                    <PROGRAM></PROGRAM>
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            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344546" center_name="RIKEN_CLST_DGT" accession="DRX344546">
        <TITLE>LShi10008_CAGATC-CGACGTA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270827" refcenter="RIKEN_CLST_DGT" accession="DRS270827">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451809</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-CGACGTA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344547" center_name="RIKEN_CLST_DGT" accession="DRX344547">
        <TITLE>LShi10008_CAGATC-CGACTGT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270996" refcenter="RIKEN_CLST_DGT" accession="DRS270996">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451978</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-CGACTGT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344548" center_name="RIKEN_CLST_DGT" accession="DRX344548">
        <TITLE>LShi10008_CAGATC-CGATCTG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270631" refcenter="RIKEN_CLST_DGT" accession="DRS270631">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451613</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-CGATCTG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344549" center_name="RIKEN_CLST_DGT" accession="DRX344549">
        <TITLE>LShi10008_CAGATC-CGATGCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271011" refcenter="RIKEN_CLST_DGT" accession="DRS271011">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451993</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-CGATGCA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344550" center_name="RIKEN_CLST_DGT" accession="DRX344550">
        <TITLE>LShi10008_CAGATC-CGTACAT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270968" refcenter="RIKEN_CLST_DGT" accession="DRS270968">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451950</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-CGTACAT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344551" center_name="RIKEN_CLST_DGT" accession="DRX344551">
        <TITLE>LShi10008_CAGATC-CGTACTG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270671" refcenter="RIKEN_CLST_DGT" accession="DRS270671">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451653</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-CGTACTG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344552" center_name="RIKEN_CLST_DGT" accession="DRX344552">
        <TITLE>LShi10008_CAGATC-CGTCATA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270997" refcenter="RIKEN_CLST_DGT" accession="DRS270997">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451979</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-CGTCATA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344553" center_name="RIKEN_CLST_DGT" accession="DRX344553">
        <TITLE>LShi10008_CAGATC-CTAGCTG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270752" refcenter="RIKEN_CLST_DGT" accession="DRS270752">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451734</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-CTAGCTG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344554" center_name="RIKEN_CLST_DGT" accession="DRX344554">
        <TITLE>LShi10008_CAGATC-CTAGTAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270839" refcenter="RIKEN_CLST_DGT" accession="DRS270839">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451821</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-CTAGTAC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344555" center_name="RIKEN_CLST_DGT" accession="DRX344555">
        <TITLE>LShi10008_CAGATC-CTAGTCG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271058" refcenter="RIKEN_CLST_DGT" accession="DRS271058">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452040</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-CTAGTCG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344556" center_name="RIKEN_CLST_DGT" accession="DRX344556">
        <TITLE>LShi10008_CAGATC-CTATGCG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270764" refcenter="RIKEN_CLST_DGT" accession="DRS270764">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451746</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-CTATGCG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344557" center_name="RIKEN_CLST_DGT" accession="DRX344557">
        <TITLE>LShi10008_CAGATC-CTCAGAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270642" refcenter="RIKEN_CLST_DGT" accession="DRS270642">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451624</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-CTCAGAG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344558" center_name="RIKEN_CLST_DGT" accession="DRX344558">
        <TITLE>LShi10008_CAGATC-CTCGATA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270994" refcenter="RIKEN_CLST_DGT" accession="DRS270994">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451976</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-CTCGATA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344559" center_name="RIKEN_CLST_DGT" accession="DRX344559">
        <TITLE>LShi10008_CAGATC-CTGATGC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270838" refcenter="RIKEN_CLST_DGT" accession="DRS270838">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451820</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-CTGATGC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344560" center_name="RIKEN_CLST_DGT" accession="DRX344560">
        <TITLE>LShi10008_CAGATC-GACACTG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271106" refcenter="RIKEN_CLST_DGT" accession="DRS271106">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452088</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-GACACTG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344561" center_name="RIKEN_CLST_DGT" accession="DRX344561">
        <TITLE>LShi10008_CAGATC-GACATCG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270848" refcenter="RIKEN_CLST_DGT" accession="DRS270848">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451830</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-GACATCG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344562" center_name="RIKEN_CLST_DGT" accession="DRX344562">
        <TITLE>LShi10008_CAGATC-GACTACT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270995" refcenter="RIKEN_CLST_DGT" accession="DRS270995">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451977</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-GACTACT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344563" center_name="RIKEN_CLST_DGT" accession="DRX344563">
        <TITLE>LShi10008_CAGATC-GACTAGC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270846" refcenter="RIKEN_CLST_DGT" accession="DRS270846">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451828</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-GACTAGC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344564" center_name="RIKEN_CLST_DGT" accession="DRX344564">
        <TITLE>LShi10008_CAGATC-GAGCTCT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270762" refcenter="RIKEN_CLST_DGT" accession="DRS270762">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451744</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-GAGCTCT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344565" center_name="RIKEN_CLST_DGT" accession="DRX344565">
        <TITLE>LShi10008_CAGATC-GATATGC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271037" refcenter="RIKEN_CLST_DGT" accession="DRS271037">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452019</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-GATATGC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344566" center_name="RIKEN_CLST_DGT" accession="DRX344566">
        <TITLE>LShi10008_CAGATC-GATCACG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270967" refcenter="RIKEN_CLST_DGT" accession="DRS270967">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451949</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-GATCACG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344567" center_name="RIKEN_CLST_DGT" accession="DRX344567">
        <TITLE>LShi10008_CAGATC-GATCGCT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271000" refcenter="RIKEN_CLST_DGT" accession="DRS271000">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451982</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-GATCGCT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344568" center_name="RIKEN_CLST_DGT" accession="DRX344568">
        <TITLE>LShi10008_CAGATC-GATCTCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270966" refcenter="RIKEN_CLST_DGT" accession="DRS270966">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451948</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-GATCTCA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344569" center_name="RIKEN_CLST_DGT" accession="DRX344569">
        <TITLE>LShi10008_CAGATC-GATGCAT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270995" refcenter="RIKEN_CLST_DGT" accession="DRS270995">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451977</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-GATGCAT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344570" center_name="RIKEN_CLST_DGT" accession="DRX344570">
        <TITLE>LShi10008_CAGATC-GCAGACT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270847" refcenter="RIKEN_CLST_DGT" accession="DRS270847">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451829</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-GCAGACT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344571" center_name="RIKEN_CLST_DGT" accession="DRX344571">
        <TITLE>LShi10008_CAGATC-GCATATG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271038" refcenter="RIKEN_CLST_DGT" accession="DRS271038">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452020</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-GCATATG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344572" center_name="RIKEN_CLST_DGT" accession="DRX344572">
        <TITLE>LShi10008_CAGATC-GCGTATA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270937" refcenter="RIKEN_CLST_DGT" accession="DRS270937">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451919</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-GCGTATA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344573" center_name="RIKEN_CLST_DGT" accession="DRX344573">
        <TITLE>LShi10008_CAGATC-GCTACGA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270835" refcenter="RIKEN_CLST_DGT" accession="DRS270835">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451817</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-GCTACGA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344574" center_name="RIKEN_CLST_DGT" accession="DRX344574">
        <TITLE>LShi10008_CAGATC-GCTAGCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270680" refcenter="RIKEN_CLST_DGT" accession="DRS270680">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451662</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-GCTAGCA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344575" center_name="RIKEN_CLST_DGT" accession="DRX344575">
        <TITLE>LShi10008_CAGATC-GCTATAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270828" refcenter="RIKEN_CLST_DGT" accession="DRS270828">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451810</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-GCTATAG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344576" center_name="RIKEN_CLST_DGT" accession="DRX344576">
        <TITLE>LShi10008_CAGATC-GCTCATG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270824" refcenter="RIKEN_CLST_DGT" accession="DRS270824">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451806</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-GCTCATG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344577" center_name="RIKEN_CLST_DGT" accession="DRX344577">
        <TITLE>LShi10008_CAGATC-GCTGTAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270971" refcenter="RIKEN_CLST_DGT" accession="DRS270971">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451953</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-GCTGTAC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344578" center_name="RIKEN_CLST_DGT" accession="DRX344578">
        <TITLE>LShi10008_CAGATC-GTACATG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271009" refcenter="RIKEN_CLST_DGT" accession="DRS271009">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451991</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-GTACATG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344579" center_name="RIKEN_CLST_DGT" accession="DRX344579">
        <TITLE>LShi10008_CAGATC-GTATAGC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270932" refcenter="RIKEN_CLST_DGT" accession="DRS270932">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451914</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-GTATAGC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344580" center_name="RIKEN_CLST_DGT" accession="DRX344580">
        <TITLE>LShi10008_CAGATC-GTCACAT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271061" refcenter="RIKEN_CLST_DGT" accession="DRS271061">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452043</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-GTCACAT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344581" center_name="RIKEN_CLST_DGT" accession="DRX344581">
        <TITLE>LShi10008_CAGATC-GTGACTC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270969" refcenter="RIKEN_CLST_DGT" accession="DRS270969">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451951</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-GTGACTC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344582" center_name="RIKEN_CLST_DGT" accession="DRX344582">
        <TITLE>LShi10008_CAGATC-GTGCATA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270765" refcenter="RIKEN_CLST_DGT" accession="DRS270765">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451747</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-GTGCATA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344583" center_name="RIKEN_CLST_DGT" accession="DRX344583">
        <TITLE>LShi10008_CAGATC-TACGCGT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270990" refcenter="RIKEN_CLST_DGT" accession="DRS270990">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451972</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-TACGCGT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344584" center_name="RIKEN_CLST_DGT" accession="DRX344584">
        <TITLE>LShi10008_CAGATC-TACGCTA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270991" refcenter="RIKEN_CLST_DGT" accession="DRS270991">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451973</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-TACGCTA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344585" center_name="RIKEN_CLST_DGT" accession="DRX344585">
        <TITLE>LShi10008_CAGATC-TACGTAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270634" refcenter="RIKEN_CLST_DGT" accession="DRS270634">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451616</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-TACGTAG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344586" center_name="RIKEN_CLST_DGT" accession="DRX344586">
        <TITLE>LShi10008_CAGATC-TACGTCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270993" refcenter="RIKEN_CLST_DGT" accession="DRS270993">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451975</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-TACGTCA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344587" center_name="RIKEN_CLST_DGT" accession="DRX344587">
        <TITLE>LShi10008_CAGATC-TACTGAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270755" refcenter="RIKEN_CLST_DGT" accession="DRS270755">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451737</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-TACTGAG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344588" center_name="RIKEN_CLST_DGT" accession="DRX344588">
        <TITLE>LShi10008_CAGATC-TAGCATC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271060" refcenter="RIKEN_CLST_DGT" accession="DRS271060">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452042</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-TAGCATC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344589" center_name="RIKEN_CLST_DGT" accession="DRX344589">
        <TITLE>LShi10008_CAGATC-TAGCGAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270992" refcenter="RIKEN_CLST_DGT" accession="DRS270992">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451974</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-TAGCGAC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344590" center_name="RIKEN_CLST_DGT" accession="DRX344590">
        <TITLE>LShi10008_CAGATC-TAGCGTA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271175" refcenter="RIKEN_CLST_DGT" accession="DRS271175">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452157</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-TAGCGTA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344591" center_name="RIKEN_CLST_DGT" accession="DRX344591">
        <TITLE>LShi10008_CAGATC-TAGCTCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271008" refcenter="RIKEN_CLST_DGT" accession="DRS271008">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451990</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-TAGCTCA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344592" center_name="RIKEN_CLST_DGT" accession="DRX344592">
        <TITLE>LShi10008_CAGATC-TAGTCAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270630" refcenter="RIKEN_CLST_DGT" accession="DRS270630">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451612</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-TAGTCAC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344593" center_name="RIKEN_CLST_DGT" accession="DRX344593">
        <TITLE>LShi10008_CAGATC-TATGCAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270679" refcenter="RIKEN_CLST_DGT" accession="DRS270679">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451661</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-TATGCAC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344594" center_name="RIKEN_CLST_DGT" accession="DRX344594">
        <TITLE>LShi10008_CAGATC-TCACAGT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271016" refcenter="RIKEN_CLST_DGT" accession="DRS271016">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451998</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-TCACAGT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344595" center_name="RIKEN_CLST_DGT" accession="DRX344595">
        <TITLE>LShi10008_CAGATC-TCACGTG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270934" refcenter="RIKEN_CLST_DGT" accession="DRS270934">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451916</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-TCACGTG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344596" center_name="RIKEN_CLST_DGT" accession="DRX344596">
        <TITLE>LShi10008_CAGATC-TCGCTGA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270664" refcenter="RIKEN_CLST_DGT" accession="DRS270664">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451646</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-TCGCTGA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344597" center_name="RIKEN_CLST_DGT" accession="DRX344597">
        <TITLE>LShi10008_CAGATC-TCGTGAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270643" refcenter="RIKEN_CLST_DGT" accession="DRS270643">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451625</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-TCGTGAC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344598" center_name="RIKEN_CLST_DGT" accession="DRX344598">
        <TITLE>LShi10008_CAGATC-TCTCGAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270849" refcenter="RIKEN_CLST_DGT" accession="DRS270849">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451831</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-TCTCGAG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344599" center_name="RIKEN_CLST_DGT" accession="DRX344599">
        <TITLE>LShi10008_CAGATC-TGACTCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270933" refcenter="RIKEN_CLST_DGT" accession="DRS270933">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451915</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-TGACTCA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344600" center_name="RIKEN_CLST_DGT" accession="DRX344600">
        <TITLE>LShi10008_CAGATC-TGACTGC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270837" refcenter="RIKEN_CLST_DGT" accession="DRS270837">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451819</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-TGACTGC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344601" center_name="RIKEN_CLST_DGT" accession="DRX344601">
        <TITLE>LShi10008_CAGATC-TGCTACA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271174" refcenter="RIKEN_CLST_DGT" accession="DRS271174">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452156</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-TGCTACA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344602" center_name="RIKEN_CLST_DGT" accession="DRX344602">
        <TITLE>LShi10008_CAGATC-TGTCACG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270672" refcenter="RIKEN_CLST_DGT" accession="DRS270672">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451654</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-TGTCACG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344603" center_name="RIKEN_CLST_DGT" accession="DRX344603">
        <TITLE>LShi10008_CAGATC-TGTCAGA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270935" refcenter="RIKEN_CLST_DGT" accession="DRS270935">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451917</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-TGTCAGA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344604" center_name="RIKEN_CLST_DGT" accession="DRX344604">
        <TITLE>LShi10008_CAGATC-TGTCGAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271039" refcenter="RIKEN_CLST_DGT" accession="DRS271039">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452021</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-TGTCGAC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344605" center_name="RIKEN_CLST_DGT" accession="DRX344605">
        <TITLE>LShi10008_CAGATC-TGTCGCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271104" refcenter="RIKEN_CLST_DGT" accession="DRS271104">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452086</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CAGATC-TGTCGCA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344606" center_name="RIKEN_CLST_DGT" accession="DRX344606">
        <TITLE>LShi10008_CGATGT-ACGTCGA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270840" refcenter="RIKEN_CLST_DGT" accession="DRS270840">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451822</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-ACGTCGA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344607" center_name="RIKEN_CLST_DGT" accession="DRX344607">
        <TITLE>LShi10008_CGATGT-ACTATGC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271024" refcenter="RIKEN_CLST_DGT" accession="DRS271024">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452006</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-ACTATGC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344608" center_name="RIKEN_CLST_DGT" accession="DRX344608">
        <TITLE>LShi10008_CGATGT-ACTGCAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270845" refcenter="RIKEN_CLST_DGT" accession="DRS270845">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451827</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-ACTGCAG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344609" center_name="RIKEN_CLST_DGT" accession="DRX344609">
        <TITLE>LShi10008_CGATGT-AGACGCT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270733" refcenter="RIKEN_CLST_DGT" accession="DRS270733">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451715</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-AGACGCT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344610" center_name="RIKEN_CLST_DGT" accession="DRX344610">
        <TITLE>LShi10008_CGATGT-AGCATCG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270931" refcenter="RIKEN_CLST_DGT" accession="DRS270931">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451913</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-AGCATCG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344611" center_name="RIKEN_CLST_DGT" accession="DRX344611">
        <TITLE>LShi10008_CGATGT-AGCTCAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271025" refcenter="RIKEN_CLST_DGT" accession="DRS271025">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452007</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-AGCTCAG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344612" center_name="RIKEN_CLST_DGT" accession="DRX344612">
        <TITLE>LShi10008_CGATGT-AGCTCGA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271012" refcenter="RIKEN_CLST_DGT" accession="DRS271012">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451994</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-AGCTCGA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344613" center_name="RIKEN_CLST_DGT" accession="DRX344613">
        <TITLE>LShi10008_CGATGT-AGTCAGT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270843" refcenter="RIKEN_CLST_DGT" accession="DRS270843">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451825</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-AGTCAGT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344614" center_name="RIKEN_CLST_DGT" accession="DRX344614">
        <TITLE>LShi10008_CGATGT-AGTGTCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271156" refcenter="RIKEN_CLST_DGT" accession="DRS271156">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452138</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-AGTGTCA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344615" center_name="RIKEN_CLST_DGT" accession="DRX344615">
        <TITLE>LShi10008_CGATGT-ATACGTC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270786" refcenter="RIKEN_CLST_DGT" accession="DRS270786">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451768</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-ATACGTC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344616" center_name="RIKEN_CLST_DGT" accession="DRX344616">
        <TITLE>LShi10008_CGATGT-ATCAGCG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270645" refcenter="RIKEN_CLST_DGT" accession="DRS270645">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451627</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-ATCAGCG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344617" center_name="RIKEN_CLST_DGT" accession="DRX344617">
        <TITLE>LShi10008_CGATGT-ATGCACT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271143" refcenter="RIKEN_CLST_DGT" accession="DRS271143">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452125</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-ATGCACT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344618" center_name="RIKEN_CLST_DGT" accession="DRX344618">
        <TITLE>LShi10008_CGATGT-ATGCGCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270646" refcenter="RIKEN_CLST_DGT" accession="DRS270646">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451628</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-ATGCGCA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344619" center_name="RIKEN_CLST_DGT" accession="DRX344619">
        <TITLE>LShi10008_CGATGT-ATGTCAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271030" refcenter="RIKEN_CLST_DGT" accession="DRS271030">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452012</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-ATGTCAG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344620" center_name="RIKEN_CLST_DGT" accession="DRX344620">
        <TITLE>LShi10008_CGATGT-CACGTGT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270807" refcenter="RIKEN_CLST_DGT" accession="DRS270807">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451789</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-CACGTGT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344621" center_name="RIKEN_CLST_DGT" accession="DRX344621">
        <TITLE>LShi10008_CGATGT-CAGATCT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270790" refcenter="RIKEN_CLST_DGT" accession="DRS270790">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451772</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-CAGATCT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344622" center_name="RIKEN_CLST_DGT" accession="DRX344622">
        <TITLE>LShi10008_CGATGT-CAGCAGT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270789" refcenter="RIKEN_CLST_DGT" accession="DRS270789">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451771</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-CAGCAGT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344623" center_name="RIKEN_CLST_DGT" accession="DRX344623">
        <TITLE>LShi10008_CGATGT-CAGTCTG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270805" refcenter="RIKEN_CLST_DGT" accession="DRS270805">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451787</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-CAGTCTG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344624" center_name="RIKEN_CLST_DGT" accession="DRX344624">
        <TITLE>LShi10008_CGATGT-CAGTGTC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270803" refcenter="RIKEN_CLST_DGT" accession="DRS270803">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451785</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-CAGTGTC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344625" center_name="RIKEN_CLST_DGT" accession="DRX344625">
        <TITLE>LShi10008_CGATGT-CATAGCT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270842" refcenter="RIKEN_CLST_DGT" accession="DRS270842">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451824</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-CATAGCT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344626" center_name="RIKEN_CLST_DGT" accession="DRX344626">
        <TITLE>LShi10008_CGATGT-CATATCG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271140" refcenter="RIKEN_CLST_DGT" accession="DRS271140">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452122</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-CATATCG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344627" center_name="RIKEN_CLST_DGT" accession="DRX344627">
        <TITLE>LShi10008_CGATGT-CGACGTA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270787" refcenter="RIKEN_CLST_DGT" accession="DRS270787">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451769</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-CGACGTA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344628" center_name="RIKEN_CLST_DGT" accession="DRX344628">
        <TITLE>LShi10008_CGATGT-CGACTGT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270928" refcenter="RIKEN_CLST_DGT" accession="DRS270928">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451910</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-CGACTGT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344629" center_name="RIKEN_CLST_DGT" accession="DRX344629">
        <TITLE>LShi10008_CGATGT-CGATCTG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270637" refcenter="RIKEN_CLST_DGT" accession="DRS270637">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451619</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-CGATCTG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344630" center_name="RIKEN_CLST_DGT" accession="DRX344630">
        <TITLE>LShi10008_CGATGT-CGTACAT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271028" refcenter="RIKEN_CLST_DGT" accession="DRS271028">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452010</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-CGTACAT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344631" center_name="RIKEN_CLST_DGT" accession="DRX344631">
        <TITLE>LShi10008_CGATGT-CGTACTG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270673" refcenter="RIKEN_CLST_DGT" accession="DRS270673">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451655</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-CGTACTG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344632" center_name="RIKEN_CLST_DGT" accession="DRX344632">
        <TITLE>LShi10008_CGATGT-CGTCATA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270929" refcenter="RIKEN_CLST_DGT" accession="DRS270929">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451911</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-CGTCATA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344633" center_name="RIKEN_CLST_DGT" accession="DRX344633">
        <TITLE>LShi10008_CGATGT-CTAGCTG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270930" refcenter="RIKEN_CLST_DGT" accession="DRS270930">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451912</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-CTAGCTG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344634" center_name="RIKEN_CLST_DGT" accession="DRX344634">
        <TITLE>LShi10008_CGATGT-CTAGTAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271015" refcenter="RIKEN_CLST_DGT" accession="DRS271015">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451997</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-CTAGTAC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344635" center_name="RIKEN_CLST_DGT" accession="DRX344635">
        <TITLE>LShi10008_CGATGT-CTAGTCG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270732" refcenter="RIKEN_CLST_DGT" accession="DRS270732">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451714</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-CTAGTCG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344636" center_name="RIKEN_CLST_DGT" accession="DRX344636">
        <TITLE>LShi10008_CGATGT-CTATGCG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270942" refcenter="RIKEN_CLST_DGT" accession="DRS270942">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451924</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-CTATGCG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344637" center_name="RIKEN_CLST_DGT" accession="DRX344637">
        <TITLE>LShi10008_CGATGT-CTCAGAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270618" refcenter="RIKEN_CLST_DGT" accession="DRS270618">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451600</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-CTCAGAG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344638" center_name="RIKEN_CLST_DGT" accession="DRX344638">
        <TITLE>LShi10008_CGATGT-CTCGATA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271033" refcenter="RIKEN_CLST_DGT" accession="DRS271033">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452015</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-CTCGATA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344639" center_name="RIKEN_CLST_DGT" accession="DRX344639">
        <TITLE>LShi10008_CGATGT-CTGATGC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271014" refcenter="RIKEN_CLST_DGT" accession="DRS271014">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451996</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-CTGATGC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344640" center_name="RIKEN_CLST_DGT" accession="DRX344640">
        <TITLE>LShi10008_CGATGT-GACACTG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270804" refcenter="RIKEN_CLST_DGT" accession="DRS270804">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451786</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-GACACTG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344641" center_name="RIKEN_CLST_DGT" accession="DRX344641">
        <TITLE>LShi10008_CGATGT-GACATCG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270730" refcenter="RIKEN_CLST_DGT" accession="DRS270730">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451712</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-GACATCG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344642" center_name="RIKEN_CLST_DGT" accession="DRX344642">
        <TITLE>LShi10008_CGATGT-GACTACT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270926" refcenter="RIKEN_CLST_DGT" accession="DRS270926">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451908</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-GACTACT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344643" center_name="RIKEN_CLST_DGT" accession="DRX344643">
        <TITLE>LShi10008_CGATGT-GACTAGC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270920" refcenter="RIKEN_CLST_DGT" accession="DRS270920">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451902</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-GACTAGC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344644" center_name="RIKEN_CLST_DGT" accession="DRX344644">
        <TITLE>LShi10008_CGATGT-GATATGC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270918" refcenter="RIKEN_CLST_DGT" accession="DRS270918">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451900</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-GATATGC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
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                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
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        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
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        </PROCESSING>
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    <EXPERIMENT alias="DRX344645" center_name="RIKEN_CLST_DGT" accession="DRX344645">
        <TITLE>LShi10008_CGATGT-GATCACG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270944" refcenter="RIKEN_CLST_DGT" accession="DRS270944">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451926</PRIMARY_ID>
                </IDENTIFIERS>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-GATCACG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344646" center_name="RIKEN_CLST_DGT" accession="DRX344646">
        <TITLE>LShi10008_CGATGT-GATCGCT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270844" refcenter="RIKEN_CLST_DGT" accession="DRS270844">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451826</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-GATCGCT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
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            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344647" center_name="RIKEN_CLST_DGT" accession="DRX344647">
        <TITLE>LShi10008_CGATGT-GATCTCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270943" refcenter="RIKEN_CLST_DGT" accession="DRS270943">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451925</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-GATCTCA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344648" center_name="RIKEN_CLST_DGT" accession="DRX344648">
        <TITLE>LShi10008_CGATGT-GATGCAT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270927" refcenter="RIKEN_CLST_DGT" accession="DRS270927">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451909</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-GATGCAT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344649" center_name="RIKEN_CLST_DGT" accession="DRX344649">
        <TITLE>LShi10008_CGATGT-GCAGACT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270921" refcenter="RIKEN_CLST_DGT" accession="DRS270921">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451903</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-GCAGACT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344650" center_name="RIKEN_CLST_DGT" accession="DRX344650">
        <TITLE>LShi10008_CGATGT-GCATATG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270919" refcenter="RIKEN_CLST_DGT" accession="DRS270919">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451901</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-GCATATG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344651" center_name="RIKEN_CLST_DGT" accession="DRX344651">
        <TITLE>LShi10008_CGATGT-GCGTATA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271141" refcenter="RIKEN_CLST_DGT" accession="DRS271141">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452123</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-GCGTATA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344652" center_name="RIKEN_CLST_DGT" accession="DRX344652">
        <TITLE>LShi10008_CGATGT-GCTACGA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
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        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270791" refcenter="RIKEN_CLST_DGT" accession="DRS270791">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451773</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-GCTACGA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
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                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
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            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
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                    <VERSION></VERSION>
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            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344653" center_name="RIKEN_CLST_DGT" accession="DRX344653">
        <TITLE>LShi10008_CGATGT-GCTATAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
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        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270788" refcenter="RIKEN_CLST_DGT" accession="DRS270788">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451770</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
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                        <READ_INDEX>1</READ_INDEX>
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                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
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        <PROCESSING>
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                <PIPE_SECTION>
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                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
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    <EXPERIMENT alias="DRX344654" center_name="RIKEN_CLST_DGT" accession="DRX344654">
        <TITLE>LShi10008_CGATGT-GCTCATG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270806" refcenter="RIKEN_CLST_DGT" accession="DRS270806">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451788</PRIMARY_ID>
                </IDENTIFIERS>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-GCTCATG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
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        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
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                    <VERSION></VERSION>
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            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344655" center_name="RIKEN_CLST_DGT" accession="DRX344655">
        <TITLE>LShi10008_CGATGT-GCTGTAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271031" refcenter="RIKEN_CLST_DGT" accession="DRS271031">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452013</PRIMARY_ID>
                </IDENTIFIERS>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-GCTGTAC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
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        </DESIGN>
        <PLATFORM>
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                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
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        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
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                    <VERSION></VERSION>
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            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344656" center_name="RIKEN_CLST_DGT" accession="DRX344656">
        <TITLE>LShi10008_CGATGT-GTACATG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271027" refcenter="RIKEN_CLST_DGT" accession="DRS271027">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452009</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-GTACATG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344657" center_name="RIKEN_CLST_DGT" accession="DRX344657">
        <TITLE>LShi10008_CGATGT-GTCACAT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270735" refcenter="RIKEN_CLST_DGT" accession="DRS270735">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451717</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-GTCACAT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344658" center_name="RIKEN_CLST_DGT" accession="DRX344658">
        <TITLE>LShi10008_CGATGT-GTGACTC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271029" refcenter="RIKEN_CLST_DGT" accession="DRS271029">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452011</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-GTGACTC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344659" center_name="RIKEN_CLST_DGT" accession="DRX344659">
        <TITLE>LShi10008_CGATGT-GTGCATA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270943" refcenter="RIKEN_CLST_DGT" accession="DRS270943">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451925</PRIMARY_ID>
                </IDENTIFIERS>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-GTGCATA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344660" center_name="RIKEN_CLST_DGT" accession="DRX344660">
        <TITLE>LShi10008_CGATGT-TACGCGT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271157" refcenter="RIKEN_CLST_DGT" accession="DRS271157">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452139</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-TACGCGT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
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            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344661" center_name="RIKEN_CLST_DGT" accession="DRX344661">
        <TITLE>LShi10008_CGATGT-TACGCTA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
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        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271158" refcenter="RIKEN_CLST_DGT" accession="DRS271158">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452140</PRIMARY_ID>
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            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-TACGCTA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344662" center_name="RIKEN_CLST_DGT" accession="DRX344662">
        <TITLE>LShi10008_CGATGT-TACGTAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271142" refcenter="RIKEN_CLST_DGT" accession="DRS271142">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452124</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-TACGTAG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344663" center_name="RIKEN_CLST_DGT" accession="DRX344663">
        <TITLE>LShi10008_CGATGT-TACGTCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271032" refcenter="RIKEN_CLST_DGT" accession="DRS271032">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452014</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-TACGTCA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344664" center_name="RIKEN_CLST_DGT" accession="DRX344664">
        <TITLE>LShi10008_CGATGT-TACTGAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270841" refcenter="RIKEN_CLST_DGT" accession="DRS270841">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451823</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-TACTGAG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344665" center_name="RIKEN_CLST_DGT" accession="DRX344665">
        <TITLE>LShi10008_CGATGT-TAGCATC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270734" refcenter="RIKEN_CLST_DGT" accession="DRS270734">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451716</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-TAGCATC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344666" center_name="RIKEN_CLST_DGT" accession="DRX344666">
        <TITLE>LShi10008_CGATGT-TAGCGAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271159" refcenter="RIKEN_CLST_DGT" accession="DRS271159">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452141</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-TAGCGAC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344667" center_name="RIKEN_CLST_DGT" accession="DRX344667">
        <TITLE>LShi10008_CGATGT-TAGCTCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271026" refcenter="RIKEN_CLST_DGT" accession="DRS271026">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452008</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-TAGCTCA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344668" center_name="RIKEN_CLST_DGT" accession="DRX344668">
        <TITLE>LShi10008_CGATGT-TAGTCAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270636" refcenter="RIKEN_CLST_DGT" accession="DRS270636">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451618</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-TAGTCAC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344669" center_name="RIKEN_CLST_DGT" accession="DRX344669">
        <TITLE>LShi10008_CGATGT-TCGCTGA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270644" refcenter="RIKEN_CLST_DGT" accession="DRS270644">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451626</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-TCGCTGA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344670" center_name="RIKEN_CLST_DGT" accession="DRX344670">
        <TITLE>LShi10008_CGATGT-TCGTGAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270619" refcenter="RIKEN_CLST_DGT" accession="DRS270619">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451601</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-TCGTGAC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
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                        <BASE_COORD>52</BASE_COORD>
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                </SPOT_DECODE_SPEC>
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        </DESIGN>
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            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
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            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344671" center_name="RIKEN_CLST_DGT" accession="DRX344671">
        <TITLE>LShi10008_CGATGT-TCTCGAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
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                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
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        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270731" refcenter="RIKEN_CLST_DGT" accession="DRS270731">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451713</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
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                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
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                        <READ_INDEX>1</READ_INDEX>
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        </DESIGN>
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                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
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                <PIPE_SECTION>
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    <EXPERIMENT alias="DRX344672" center_name="RIKEN_CLST_DGT" accession="DRX344672">
        <TITLE>LShi10008_CGATGT-TGACTGC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
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        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271013" refcenter="RIKEN_CLST_DGT" accession="DRS271013">
                <IDENTIFIERS>
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            <LIBRARY_DESCRIPTOR>
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                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
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                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
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                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
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        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
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            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344673" center_name="RIKEN_CLST_DGT" accession="DRX344673">
        <TITLE>LShi10008_CGATGT-TGTCACG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
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        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270674" refcenter="RIKEN_CLST_DGT" accession="DRS270674">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451656</PRIMARY_ID>
                </IDENTIFIERS>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-TGTCACG</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
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                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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        </PROCESSING>
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    <EXPERIMENT alias="DRX344674" center_name="RIKEN_CLST_DGT" accession="DRX344674">
        <TITLE>LShi10008_CGATGT-TGTCGCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
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        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270802" refcenter="RIKEN_CLST_DGT" accession="DRS270802">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451784</PRIMARY_ID>
                </IDENTIFIERS>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_CGATGT-TGTCGCA</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344675" center_name="RIKEN_CLST_DGT" accession="DRX344675">
        <TITLE>LShi10008_GCCAAT-ACAGCTG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271049" refcenter="RIKEN_CLST_DGT" accession="DRS271049">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452031</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_GCCAAT-ACAGCTG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
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                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344676" center_name="RIKEN_CLST_DGT" accession="DRX344676">
        <TITLE>LShi10008_GCCAAT-ACATGTC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271048" refcenter="RIKEN_CLST_DGT" accession="DRS271048">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452030</PRIMARY_ID>
                </IDENTIFIERS>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_GCCAAT-ACATGTC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
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                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
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                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344677" center_name="RIKEN_CLST_DGT" accession="DRX344677">
        <TITLE>LShi10008_GCCAAT-ACGTCGA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
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        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270862" refcenter="RIKEN_CLST_DGT" accession="DRS270862">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451844</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_GCCAAT-ACGTCGA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344678" center_name="RIKEN_CLST_DGT" accession="DRX344678">
        <TITLE>LShi10008_GCCAAT-ACTATGC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
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        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271118" refcenter="RIKEN_CLST_DGT" accession="DRS271118">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452100</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_GCCAAT-ACTATGC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
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        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344679" center_name="RIKEN_CLST_DGT" accession="DRX344679">
        <TITLE>LShi10008_GCCAAT-ACTGCAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
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        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271117" refcenter="RIKEN_CLST_DGT" accession="DRS271117">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452099</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_GCCAAT-ACTGCAG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
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                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
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                        <READ_CLASS>Application Read</READ_CLASS>
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                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
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        </PLATFORM>
        <PROCESSING>
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                <PIPE_SECTION>
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        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344680" center_name="RIKEN_CLST_DGT" accession="DRX344680">
        <TITLE>LShi10008_GCCAAT-AGACGCT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
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        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270823" refcenter="RIKEN_CLST_DGT" accession="DRS270823">
                <IDENTIFIERS>
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            <LIBRARY_DESCRIPTOR>
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                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
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        <TITLE>LShi10008_GCCAAT-AGCATGC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
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        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
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                <IDENTIFIERS>
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            <LIBRARY_DESCRIPTOR>
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                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
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                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
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                    <READ_SPEC>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
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                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
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                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
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            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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        </PROCESSING>
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    <EXPERIMENT alias="DRX344682" center_name="RIKEN_CLST_DGT" accession="DRX344682">
        <TITLE>LShi10008_GCCAAT-AGCTCAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
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        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271119" refcenter="RIKEN_CLST_DGT" accession="DRS271119">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452101</PRIMARY_ID>
                </IDENTIFIERS>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_GCCAAT-AGCTCAG</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
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                        <READ_TYPE>Forward</READ_TYPE>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
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                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
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        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
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        </PROCESSING>
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    <EXPERIMENT alias="DRX344683" center_name="RIKEN_CLST_DGT" accession="DRX344683">
        <TITLE>LShi10008_GCCAAT-AGCTCGA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
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        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271138" refcenter="RIKEN_CLST_DGT" accession="DRS271138">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452120</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_GCCAAT-AGCTCGA</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
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        </DESIGN>
        <PLATFORM>
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                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
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                <PIPE_SECTION>
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                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
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                    <VERSION></VERSION>
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            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344684" center_name="RIKEN_CLST_DGT" accession="DRX344684">
        <TITLE>LShi10008_GCCAAT-AGTACGC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271051" refcenter="RIKEN_CLST_DGT" accession="DRS271051">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452033</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_GCCAAT-AGTACGC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
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        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344685" center_name="RIKEN_CLST_DGT" accession="DRX344685">
        <TITLE>LShi10008_GCCAAT-AGTCAGT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270865" refcenter="RIKEN_CLST_DGT" accession="DRS270865">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451847</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_GCCAAT-AGTCAGT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
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                        <READ_CLASS>Application Read</READ_CLASS>
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                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
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            <PIPELINE>
                <PIPE_SECTION>
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                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344686" center_name="RIKEN_CLST_DGT" accession="DRX344686">
        <TITLE>LShi10008_GCCAAT-AGTGTCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
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        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270757" refcenter="RIKEN_CLST_DGT" accession="DRS270757">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451739</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_GCCAAT-AGTGTCA</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
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        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
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                <PIPE_SECTION>
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                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
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        </PROCESSING>
    </EXPERIMENT>
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        <TITLE>LShi10008_GCCAAT-ATACGTC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
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        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270742" refcenter="RIKEN_CLST_DGT" accession="DRS270742">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451724</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_GCCAAT-ATACGTC</LIBRARY_NAME>
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                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
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                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
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                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
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        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
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                <PIPE_SECTION>
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                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
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        </PROCESSING>
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        <TITLE>LShi10008_GCCAAT-ATCAGCG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
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                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
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        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270661" refcenter="RIKEN_CLST_DGT" accession="DRS270661">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451643</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_GCCAAT-ATCAGCG</LIBRARY_NAME>
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                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
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        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
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                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
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        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
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                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
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            <SPOT_DESCRIPTOR>
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        <TITLE>LShi10008_GCCAAT-CACTATG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
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                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
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        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270881" refcenter="RIKEN_CLST_DGT" accession="DRS270881">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451863</PRIMARY_ID>
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                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
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                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
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                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
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        <TITLE>LShi10008_GCCAAT-CAGATCT.experiment</TITLE>
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        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271136" refcenter="RIKEN_CLST_DGT" accession="DRS271136">
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                    <PRIMARY_ID label="BioSample ID">SAMD00452118</PRIMARY_ID>
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                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
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        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
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                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
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        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270745" refcenter="RIKEN_CLST_DGT" accession="DRS270745">
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                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
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        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
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                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
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        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
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                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
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                        <READ_TYPE>Forward</READ_TYPE>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
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                </SPOT_DECODE_SPEC>
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        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
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        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
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                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344698" center_name="RIKEN_CLST_DGT" accession="DRX344698">
        <TITLE>LShi10008_GCCAAT-CATAGCT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270864" refcenter="RIKEN_CLST_DGT" accession="DRS270864">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451846</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
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                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
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                        <BASE_COORD>52</BASE_COORD>
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        </DESIGN>
        <PLATFORM>
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                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
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        <PROCESSING>
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                <PIPE_SECTION>
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        </PROCESSING>
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    <EXPERIMENT alias="DRX344699" center_name="RIKEN_CLST_DGT" accession="DRX344699">
        <TITLE>LShi10008_GCCAAT-CATATCG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270707" refcenter="RIKEN_CLST_DGT" accession="DRS270707">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451689</PRIMARY_ID>
                </IDENTIFIERS>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_GCCAAT-CATATCG</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344700" center_name="RIKEN_CLST_DGT" accession="DRX344700">
        <TITLE>LShi10008_GCCAAT-CGACGAT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270659" refcenter="RIKEN_CLST_DGT" accession="DRS270659">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451641</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_GCCAAT-CGACGAT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
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        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344701" center_name="RIKEN_CLST_DGT" accession="DRX344701">
        <TITLE>LShi10008_GCCAAT-CGACGTA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270743" refcenter="RIKEN_CLST_DGT" accession="DRS270743">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451725</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_GCCAAT-CGACGTA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344702" center_name="RIKEN_CLST_DGT" accession="DRX344702">
        <TITLE>LShi10008_GCCAAT-CGATCTG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270641" refcenter="RIKEN_CLST_DGT" accession="DRS270641">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451623</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_GCCAAT-CGATCTG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344703" center_name="RIKEN_CLST_DGT" accession="DRX344703">
        <TITLE>LShi10008_GCCAAT-CGTACAT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271052" refcenter="RIKEN_CLST_DGT" accession="DRS271052">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452034</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_GCCAAT-CGTACAT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344704" center_name="RIKEN_CLST_DGT" accession="DRX344704">
        <TITLE>LShi10008_GCCAAT-CGTACTG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270677" refcenter="RIKEN_CLST_DGT" accession="DRS270677">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451659</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_GCCAAT-CGTACTG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
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                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344705" center_name="RIKEN_CLST_DGT" accession="DRX344705">
        <TITLE>LShi10008_GCCAAT-CTAGTAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271045" refcenter="RIKEN_CLST_DGT" accession="DRS271045">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452027</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_GCCAAT-CTAGTAC</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
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            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344706" center_name="RIKEN_CLST_DGT" accession="DRX344706">
        <TITLE>LShi10008_GCCAAT-CTAGTCG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
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        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270822" refcenter="RIKEN_CLST_DGT" accession="DRS270822">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451804</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_GCCAAT-CTAGTCG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
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                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344707" center_name="RIKEN_CLST_DGT" accession="DRX344707">
        <TITLE>LShi10008_GCCAAT-CTCAGAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270628" refcenter="RIKEN_CLST_DGT" accession="DRS270628">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451610</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_GCCAAT-CTCAGAG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344708" center_name="RIKEN_CLST_DGT" accession="DRX344708">
        <TITLE>LShi10008_GCCAAT-CTCGATA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271057" refcenter="RIKEN_CLST_DGT" accession="DRS271057">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452039</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_GCCAAT-CTCGATA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344709" center_name="RIKEN_CLST_DGT" accession="DRX344709">
        <TITLE>LShi10008_GCCAAT-CTGATAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270860" refcenter="RIKEN_CLST_DGT" accession="DRS270860">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451842</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_GCCAAT-CTGATAG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344710" center_name="RIKEN_CLST_DGT" accession="DRX344710">
        <TITLE>LShi10008_GCCAAT-CTGATGC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271044" refcenter="RIKEN_CLST_DGT" accession="DRS271044">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452026</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_GCCAAT-CTGATGC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344711" center_name="RIKEN_CLST_DGT" accession="DRX344711">
        <TITLE>LShi10008_GCCAAT-GACACTG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271112" refcenter="RIKEN_CLST_DGT" accession="DRS271112">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452094</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_GCCAAT-GACACTG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344712" center_name="RIKEN_CLST_DGT" accession="DRX344712">
        <TITLE>LShi10008_GCCAAT-GACATCG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270820" refcenter="RIKEN_CLST_DGT" accession="DRS270820">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451802</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_GCCAAT-GACATCG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344713" center_name="RIKEN_CLST_DGT" accession="DRX344713">
        <TITLE>LShi10008_GCCAAT-GACTAGC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270818" refcenter="RIKEN_CLST_DGT" accession="DRS270818">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451800</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_GCCAAT-GACTAGC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344714" center_name="RIKEN_CLST_DGT" accession="DRX344714">
        <TITLE>LShi10008_GCCAAT-GAGCTCT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271050" refcenter="RIKEN_CLST_DGT" accession="DRS271050">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452032</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_GCCAAT-GAGCTCT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344715" center_name="RIKEN_CLST_DGT" accession="DRX344715">
        <TITLE>LShi10008_GCCAAT-GATATGC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270709" refcenter="RIKEN_CLST_DGT" accession="DRS270709">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451691</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_GCCAAT-GATATGC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344716" center_name="RIKEN_CLST_DGT" accession="DRX344716">
        <TITLE>LShi10008_GCCAAT-GATCGCT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271116" refcenter="RIKEN_CLST_DGT" accession="DRS271116">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452098</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_GCCAAT-GATCGCT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344717" center_name="RIKEN_CLST_DGT" accession="DRX344717">
        <TITLE>LShi10008_GCCAAT-GCAGACT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270819" refcenter="RIKEN_CLST_DGT" accession="DRS270819">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451801</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_GCCAAT-GCAGACT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344718" center_name="RIKEN_CLST_DGT" accession="DRX344718">
        <TITLE>LShi10008_GCCAAT-GCATATG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270710" refcenter="RIKEN_CLST_DGT" accession="DRS270710">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451692</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_GCCAAT-GCATATG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344719" center_name="RIKEN_CLST_DGT" accession="DRX344719">
        <TITLE>LShi10008_GCCAAT-GCGTATA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270708" refcenter="RIKEN_CLST_DGT" accession="DRS270708">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451690</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_GCCAAT-GCGTATA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344720" center_name="RIKEN_CLST_DGT" accession="DRX344720">
        <TITLE>LShi10008_GCCAAT-GCTACGA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271137" refcenter="RIKEN_CLST_DGT" accession="DRS271137">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452119</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_GCCAAT-GCTACGA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344721" center_name="RIKEN_CLST_DGT" accession="DRX344721">
        <TITLE>LShi10008_GCCAAT-GCTAGCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271165" refcenter="RIKEN_CLST_DGT" accession="DRS271165">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452147</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_GCCAAT-GCTAGCA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344722" center_name="RIKEN_CLST_DGT" accession="DRX344722">
        <TITLE>LShi10008_GCCAAT-GCTATAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270744" refcenter="RIKEN_CLST_DGT" accession="DRS270744">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451726</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_GCCAAT-GCTATAG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344723" center_name="RIKEN_CLST_DGT" accession="DRX344723">
        <TITLE>LShi10008_GCCAAT-GCTCATG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271114" refcenter="RIKEN_CLST_DGT" accession="DRS271114">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452096</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_GCCAAT-GCTCATG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344724" center_name="RIKEN_CLST_DGT" accession="DRX344724">
        <TITLE>LShi10008_GCCAAT-GCTGTAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271055" refcenter="RIKEN_CLST_DGT" accession="DRS271055">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452037</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_GCCAAT-GCTGTAC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344725" center_name="RIKEN_CLST_DGT" accession="DRX344725">
        <TITLE>LShi10008_GCCAAT-GTCACAT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270756" refcenter="RIKEN_CLST_DGT" accession="DRS270756">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451738</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_GCCAAT-GTCACAT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344726" center_name="RIKEN_CLST_DGT" accession="DRX344726">
        <TITLE>LShi10008_GCCAAT-GTGACTC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271053" refcenter="RIKEN_CLST_DGT" accession="DRS271053">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452035</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_GCCAAT-GTGACTC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344727" center_name="RIKEN_CLST_DGT" accession="DRX344727">
        <TITLE>LShi10008_GCCAAT-TACGCGT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270758" refcenter="RIKEN_CLST_DGT" accession="DRS270758">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451740</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_GCCAAT-TACGCGT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344728" center_name="RIKEN_CLST_DGT" accession="DRX344728">
        <TITLE>LShi10008_GCCAAT-TACGCTA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270759" refcenter="RIKEN_CLST_DGT" accession="DRS270759">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451741</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_GCCAAT-TACGCTA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344729" center_name="RIKEN_CLST_DGT" accession="DRX344729">
        <TITLE>LShi10008_GCCAAT-TACGTAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270878" refcenter="RIKEN_CLST_DGT" accession="DRS270878">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451860</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_GCCAAT-TACGTAG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344730" center_name="RIKEN_CLST_DGT" accession="DRX344730">
        <TITLE>LShi10008_GCCAAT-TACGTCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271056" refcenter="RIKEN_CLST_DGT" accession="DRS271056">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452038</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_GCCAAT-TACGTCA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344731" center_name="RIKEN_CLST_DGT" accession="DRX344731">
        <TITLE>LShi10008_GCCAAT-TACTGAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270863" refcenter="RIKEN_CLST_DGT" accession="DRS270863">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451845</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_GCCAAT-TACTGAG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344732" center_name="RIKEN_CLST_DGT" accession="DRX344732">
        <TITLE>LShi10008_GCCAAT-TAGCATC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270756" refcenter="RIKEN_CLST_DGT" accession="DRS270756">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451738</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_GCCAAT-TAGCATC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344733" center_name="RIKEN_CLST_DGT" accession="DRX344733">
        <TITLE>LShi10008_GCCAAT-TAGCGAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270760" refcenter="RIKEN_CLST_DGT" accession="DRS270760">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451742</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_GCCAAT-TAGCGAC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
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                        <BASE_COORD>52</BASE_COORD>
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                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
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                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344734" center_name="RIKEN_CLST_DGT" accession="DRX344734">
        <TITLE>LShi10008_GCCAAT-TAGCGTA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271163" refcenter="RIKEN_CLST_DGT" accession="DRS271163">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452145</PRIMARY_ID>
                </IDENTIFIERS>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_GCCAAT-TAGCGTA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
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                        <READ_TYPE>Forward</READ_TYPE>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
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                        <BASE_COORD>52</BASE_COORD>
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                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
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        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344735" center_name="RIKEN_CLST_DGT" accession="DRX344735">
        <TITLE>LShi10008_GCCAAT-TAGTCAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270640" refcenter="RIKEN_CLST_DGT" accession="DRS270640">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451622</PRIMARY_ID>
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            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_GCCAAT-TAGTCAC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
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                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344736" center_name="RIKEN_CLST_DGT" accession="DRX344736">
        <TITLE>LShi10008_GCCAAT-TATGCAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271164" refcenter="RIKEN_CLST_DGT" accession="DRS271164">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452146</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_GCCAAT-TATGCAC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344737" center_name="RIKEN_CLST_DGT" accession="DRX344737">
        <TITLE>LShi10008_GCCAAT-TCACAGT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271046" refcenter="RIKEN_CLST_DGT" accession="DRS271046">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452028</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_GCCAAT-TCACAGT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344738" center_name="RIKEN_CLST_DGT" accession="DRX344738">
        <TITLE>LShi10008_GCCAAT-TCACGTG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270705" refcenter="RIKEN_CLST_DGT" accession="DRS270705">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451687</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_GCCAAT-TCACGTG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344739" center_name="RIKEN_CLST_DGT" accession="DRX344739">
        <TITLE>LShi10008_GCCAAT-TCGATAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270859" refcenter="RIKEN_CLST_DGT" accession="DRS270859">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451841</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_GCCAAT-TCGATAG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344740" center_name="RIKEN_CLST_DGT" accession="DRX344740">
        <TITLE>LShi10008_GCCAAT-TCGATCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270858" refcenter="RIKEN_CLST_DGT" accession="DRS270858">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451840</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_GCCAAT-TCGATCA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344741" center_name="RIKEN_CLST_DGT" accession="DRX344741">
        <TITLE>LShi10008_GCCAAT-TCGCTGA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270660" refcenter="RIKEN_CLST_DGT" accession="DRS270660">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451642</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_GCCAAT-TCGCTGA</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344742" center_name="RIKEN_CLST_DGT" accession="DRX344742">
        <TITLE>LShi10008_GCCAAT-TCGTGAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270629" refcenter="RIKEN_CLST_DGT" accession="DRS270629">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451611</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_GCCAAT-TCGTGAC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
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                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
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                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
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                        <BASE_COORD>52</BASE_COORD>
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            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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                    <PROGRAM></PROGRAM>
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            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344743" center_name="RIKEN_CLST_DGT" accession="DRX344743">
        <TITLE>LShi10008_GCCAAT-TCTCGAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270821" refcenter="RIKEN_CLST_DGT" accession="DRS270821">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451803</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
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                        <BASE_COORD>52</BASE_COORD>
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                </SPOT_DECODE_SPEC>
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        </DESIGN>
        <PLATFORM>
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        <PROCESSING>
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    <EXPERIMENT alias="DRX344744" center_name="RIKEN_CLST_DGT" accession="DRX344744">
        <TITLE>LShi10008_GCCAAT-TGACTGC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271139" refcenter="RIKEN_CLST_DGT" accession="DRS271139">
                <IDENTIFIERS>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_GCCAAT-TGACTGC</LIBRARY_NAME>
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                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
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                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
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        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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                    <PROGRAM></PROGRAM>
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            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344745" center_name="RIKEN_CLST_DGT" accession="DRX344745">
        <TITLE>LShi10008_GCCAAT-TGATCAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270861" refcenter="RIKEN_CLST_DGT" accession="DRS270861">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451843</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_GCCAAT-TGATCAC</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
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                </SPOT_DECODE_SPEC>
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        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
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        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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                    <PROGRAM></PROGRAM>
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            </PIPELINE>
        </PROCESSING>
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    <EXPERIMENT alias="DRX344746" center_name="RIKEN_CLST_DGT" accession="DRX344746">
        <TITLE>LShi10008_GCCAAT-TGCTACA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271162" refcenter="RIKEN_CLST_DGT" accession="DRS271162">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452144</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_GCCAAT-TGCTACA</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344747" center_name="RIKEN_CLST_DGT" accession="DRX344747">
        <TITLE>LShi10008_GCCAAT-TGTCACG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270678" refcenter="RIKEN_CLST_DGT" accession="DRS270678">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451660</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_GCCAAT-TGTCACG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344748" center_name="RIKEN_CLST_DGT" accession="DRX344748">
        <TITLE>LShi10008_GCCAAT-TGTCAGA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270706" refcenter="RIKEN_CLST_DGT" accession="DRS270706">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451688</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_GCCAAT-TGTCAGA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344749" center_name="RIKEN_CLST_DGT" accession="DRX344749">
        <TITLE>LShi10008_GCCAAT-TGTCGAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270880" refcenter="RIKEN_CLST_DGT" accession="DRS270880">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451862</PRIMARY_ID>
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            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_GCCAAT-TGTCGAC</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344750" center_name="RIKEN_CLST_DGT" accession="DRX344750">
        <TITLE>LShi10008_GCCAAT-TGTCGCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270760" refcenter="RIKEN_CLST_DGT" accession="DRS270760">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451742</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_GCCAAT-TGTCGCA</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
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            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344751" center_name="RIKEN_CLST_DGT" accession="DRX344751">
        <TITLE>LShi10008_TGACCA-ACAGCTG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
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        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271067" refcenter="RIKEN_CLST_DGT" accession="DRS271067">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452049</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
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                    <SINGLE/>
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                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
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                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
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            <SAMPLE_DESCRIPTOR refname="DRS271066" refcenter="RIKEN_CLST_DGT" accession="DRS271066">
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                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
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        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
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                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
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                <PIPE_SECTION>
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        <TITLE>LShi10008_TGACCA-ACTATGC.experiment</TITLE>
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        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
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                <IDENTIFIERS>
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            <LIBRARY_DESCRIPTOR>
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                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
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            <SPOT_DESCRIPTOR>
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                    <READ_SPEC>
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                        <READ_INDEX>1</READ_INDEX>
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                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
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                <PIPE_SECTION>
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        <TITLE>LShi10008_TGACCA-ACTGCAG.experiment</TITLE>
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        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270700" refcenter="RIKEN_CLST_DGT" accession="DRS270700">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451682</PRIMARY_ID>
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                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
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                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
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                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
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                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
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        </PROCESSING>
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        <TITLE>LShi10008_TGACCA-AGACGCT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
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        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270773" refcenter="RIKEN_CLST_DGT" accession="DRS270773">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451755</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
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                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
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                        <READ_CLASS>Application Read</READ_CLASS>
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                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
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            </PIPELINE>
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        <TITLE>LShi10008_TGACCA-AGCATCG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
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                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
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        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270896" refcenter="RIKEN_CLST_DGT" accession="DRS270896">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451878</PRIMARY_ID>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
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                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
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                        <READ_CLASS>Application Read</READ_CLASS>
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                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
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        <TITLE>LShi10008_TGACCA-AGCATGC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
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        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271065" refcenter="RIKEN_CLST_DGT" accession="DRS271065">
                <IDENTIFIERS>
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                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
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                    <SPOT_LENGTH>102</SPOT_LENGTH>
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        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270702" refcenter="RIKEN_CLST_DGT" accession="DRS270702">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451684</PRIMARY_ID>
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                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
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                    <SPOT_LENGTH>102</SPOT_LENGTH>
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                        <READ_CLASS>Application Read</READ_CLASS>
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                        <BASE_COORD>52</BASE_COORD>
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        <PLATFORM>
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                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
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        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270750" refcenter="RIKEN_CLST_DGT" accession="DRS270750">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451732</PRIMARY_ID>
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                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344761" center_name="RIKEN_CLST_DGT" accession="DRX344761">
        <TITLE>LShi10008_TGACCA-AGTACGC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271069" refcenter="RIKEN_CLST_DGT" accession="DRS271069">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452051</PRIMARY_ID>
                </IDENTIFIERS>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TGACCA-AGTACGC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
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                        <READ_TYPE>Forward</READ_TYPE>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
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                        <BASE_COORD>52</BASE_COORD>
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                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
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                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
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        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344762" center_name="RIKEN_CLST_DGT" accession="DRX344762">
        <TITLE>LShi10008_TGACCA-AGTCAGT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271023" refcenter="RIKEN_CLST_DGT" accession="DRS271023">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452005</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TGACCA-AGTCAGT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344763" center_name="RIKEN_CLST_DGT" accession="DRX344763">
        <TITLE>LShi10008_TGACCA-AGTGTCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270886" refcenter="RIKEN_CLST_DGT" accession="DRS270886">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451868</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TGACCA-AGTGTCA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344764" center_name="RIKEN_CLST_DGT" accession="DRX344764">
        <TITLE>LShi10008_TGACCA-ATACGTC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271102" refcenter="RIKEN_CLST_DGT" accession="DRS271102">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452084</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TGACCA-ATACGTC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344765" center_name="RIKEN_CLST_DGT" accession="DRX344765">
        <TITLE>LShi10008_TGACCA-ATCAGCG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270653" refcenter="RIKEN_CLST_DGT" accession="DRS270653">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451635</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TGACCA-ATCAGCG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344766" center_name="RIKEN_CLST_DGT" accession="DRX344766">
        <TITLE>LShi10008_TGACCA-ATGCACT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270694" refcenter="RIKEN_CLST_DGT" accession="DRS270694">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451676</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TGACCA-ATGCACT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344767" center_name="RIKEN_CLST_DGT" accession="DRX344767">
        <TITLE>LShi10008_TGACCA-ATGCGCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270654" refcenter="RIKEN_CLST_DGT" accession="DRS270654">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451636</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TGACCA-ATGCGCA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344768" center_name="RIKEN_CLST_DGT" accession="DRX344768">
        <TITLE>LShi10008_TGACCA-ATGTCAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270978" refcenter="RIKEN_CLST_DGT" accession="DRS270978">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451960</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TGACCA-ATGTCAG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344769" center_name="RIKEN_CLST_DGT" accession="DRX344769">
        <TITLE>LShi10008_TGACCA-CACGTGT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271101" refcenter="RIKEN_CLST_DGT" accession="DRS271101">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452083</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TGACCA-CACGTGT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
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                        <BASE_COORD>52</BASE_COORD>
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                </SPOT_DECODE_SPEC>
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        </DESIGN>
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            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
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                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
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            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344770" center_name="RIKEN_CLST_DGT" accession="DRX344770">
        <TITLE>LShi10008_TGACCA-CAGATCT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270748" refcenter="RIKEN_CLST_DGT" accession="DRS270748">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451730</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
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                <PIPE_SECTION>
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    <EXPERIMENT alias="DRX344771" center_name="RIKEN_CLST_DGT" accession="DRX344771">
        <TITLE>LShi10008_TGACCA-CAGCAGT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
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        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270747" refcenter="RIKEN_CLST_DGT" accession="DRS270747">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451729</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TGACCA-CAGCAGT</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
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                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
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                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
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                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
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        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
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                    <VERSION></VERSION>
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            </PIPELINE>
        </PROCESSING>
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    <EXPERIMENT alias="DRX344772" center_name="RIKEN_CLST_DGT" accession="DRX344772">
        <TITLE>LShi10008_TGACCA-CAGTCTG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
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        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270795" refcenter="RIKEN_CLST_DGT" accession="DRS270795">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451777</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TGACCA-CAGTCTG</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
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                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
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            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344773" center_name="RIKEN_CLST_DGT" accession="DRX344773">
        <TITLE>LShi10008_TGACCA-CAGTGTC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270793" refcenter="RIKEN_CLST_DGT" accession="DRS270793">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451775</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TGACCA-CAGTGTC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
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            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344774" center_name="RIKEN_CLST_DGT" accession="DRX344774">
        <TITLE>LShi10008_TGACCA-CATAGCT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271022" refcenter="RIKEN_CLST_DGT" accession="DRS271022">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452004</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TGACCA-CATAGCT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
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                        <READ_CLASS>Application Read</READ_CLASS>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
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        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344775" center_name="RIKEN_CLST_DGT" accession="DRX344775">
        <TITLE>LShi10008_TGACCA-CGACGAT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270651" refcenter="RIKEN_CLST_DGT" accession="DRS270651">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451633</PRIMARY_ID>
                </IDENTIFIERS>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TGACCA-CGACGAT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
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                        <READ_TYPE>Forward</READ_TYPE>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
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        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
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                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344776" center_name="RIKEN_CLST_DGT" accession="DRX344776">
        <TITLE>LShi10008_TGACCA-CGACGTA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271103" refcenter="RIKEN_CLST_DGT" accession="DRS271103">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452085</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TGACCA-CGACGTA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
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        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
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        </PLATFORM>
        <PROCESSING>
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                <PIPE_SECTION>
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                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
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            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344777" center_name="RIKEN_CLST_DGT" accession="DRX344777">
        <TITLE>LShi10008_TGACCA-CGACTGT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
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        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270894" refcenter="RIKEN_CLST_DGT" accession="DRS270894">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451876</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TGACCA-CGACTGT</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
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        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
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        </PLATFORM>
        <PROCESSING>
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                <PIPE_SECTION>
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                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
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            </PIPELINE>
        </PROCESSING>
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    <EXPERIMENT alias="DRX344778" center_name="RIKEN_CLST_DGT" accession="DRX344778">
        <TITLE>LShi10008_TGACCA-CGATCTG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
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        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270623" refcenter="RIKEN_CLST_DGT" accession="DRS270623">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451605</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TGACCA-CGATCTG</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
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                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
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                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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                    <PROGRAM></PROGRAM>
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                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344779" center_name="RIKEN_CLST_DGT" accession="DRX344779">
        <TITLE>LShi10008_TGACCA-CGTACAT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270976" refcenter="RIKEN_CLST_DGT" accession="DRS270976">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451958</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
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                        <BASE_COORD>52</BASE_COORD>
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        <PLATFORM>
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                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
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        <PROCESSING>
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                <PIPE_SECTION>
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        </PROCESSING>
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    <EXPERIMENT alias="DRX344780" center_name="RIKEN_CLST_DGT" accession="DRX344780">
        <TITLE>LShi10008_TGACCA-CGTACTG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270681" refcenter="RIKEN_CLST_DGT" accession="DRS270681">
                <IDENTIFIERS>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TGACCA-CGTACTG</LIBRARY_NAME>
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                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
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                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344781" center_name="RIKEN_CLST_DGT" accession="DRX344781">
        <TITLE>LShi10008_TGACCA-CGTCATA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270895" refcenter="RIKEN_CLST_DGT" accession="DRS270895">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451877</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TGACCA-CGTCATA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
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            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
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        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
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            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344782" center_name="RIKEN_CLST_DGT" accession="DRX344782">
        <TITLE>LShi10008_TGACCA-CTAGCTG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270896" refcenter="RIKEN_CLST_DGT" accession="DRS270896">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451878</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TGACCA-CTAGCTG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344783" center_name="RIKEN_CLST_DGT" accession="DRX344783">
        <TITLE>LShi10008_TGACCA-CTAGTAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271063" refcenter="RIKEN_CLST_DGT" accession="DRS271063">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452045</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TGACCA-CTAGTAC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344784" center_name="RIKEN_CLST_DGT" accession="DRX344784">
        <TITLE>LShi10008_TGACCA-CTAGTCG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270772" refcenter="RIKEN_CLST_DGT" accession="DRS270772">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451754</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TGACCA-CTAGTCG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344785" center_name="RIKEN_CLST_DGT" accession="DRX344785">
        <TITLE>LShi10008_TGACCA-CTATGCG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270972" refcenter="RIKEN_CLST_DGT" accession="DRS270972">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451954</PRIMARY_ID>
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            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TGACCA-CTATGCG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
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            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344786" center_name="RIKEN_CLST_DGT" accession="DRX344786">
        <TITLE>LShi10008_TGACCA-CTCGATA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270875" refcenter="RIKEN_CLST_DGT" accession="DRS270875">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451857</PRIMARY_ID>
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            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TGACCA-CTCGATA</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
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            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
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        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
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            </PIPELINE>
        </PROCESSING>
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    <EXPERIMENT alias="DRX344787" center_name="RIKEN_CLST_DGT" accession="DRX344787">
        <TITLE>LShi10008_TGACCA-CTGATGC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
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        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271062" refcenter="RIKEN_CLST_DGT" accession="DRS271062">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452044</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TGACCA-CTGATGC</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
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                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344788" center_name="RIKEN_CLST_DGT" accession="DRX344788">
        <TITLE>LShi10008_TGACCA-GACACTG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270794" refcenter="RIKEN_CLST_DGT" accession="DRS270794">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451776</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TGACCA-GACACTG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
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                        <BASE_COORD>52</BASE_COORD>
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                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
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        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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            </PIPELINE>
        </PROCESSING>
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    <EXPERIMENT alias="DRX344789" center_name="RIKEN_CLST_DGT" accession="DRX344789">
        <TITLE>LShi10008_TGACCA-GACTACT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270876" refcenter="RIKEN_CLST_DGT" accession="DRS270876">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451858</PRIMARY_ID>
                </IDENTIFIERS>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TGACCA-GACTACT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344790" center_name="RIKEN_CLST_DGT" accession="DRX344790">
        <TITLE>LShi10008_TGACCA-GAGCTCT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271068" refcenter="RIKEN_CLST_DGT" accession="DRS271068">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452050</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TGACCA-GAGCTCT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344791" center_name="RIKEN_CLST_DGT" accession="DRX344791">
        <TITLE>LShi10008_TGACCA-GATCACG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270975" refcenter="RIKEN_CLST_DGT" accession="DRS270975">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451957</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TGACCA-GATCACG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344792" center_name="RIKEN_CLST_DGT" accession="DRX344792">
        <TITLE>LShi10008_TGACCA-GATCGCT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270699" refcenter="RIKEN_CLST_DGT" accession="DRS270699">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451681</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TGACCA-GATCGCT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344793" center_name="RIKEN_CLST_DGT" accession="DRX344793">
        <TITLE>LShi10008_TGACCA-GATCTCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270974" refcenter="RIKEN_CLST_DGT" accession="DRS270974">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451956</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TGACCA-GATCTCA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344794" center_name="RIKEN_CLST_DGT" accession="DRX344794">
        <TITLE>LShi10008_TGACCA-GATGCAT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270877" refcenter="RIKEN_CLST_DGT" accession="DRS270877">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451859</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TGACCA-GATGCAT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344795" center_name="RIKEN_CLST_DGT" accession="DRX344795">
        <TITLE>LShi10008_TGACCA-GCTACGA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270749" refcenter="RIKEN_CLST_DGT" accession="DRS270749">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451731</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TGACCA-GCTACGA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344796" center_name="RIKEN_CLST_DGT" accession="DRX344796">
        <TITLE>LShi10008_TGACCA-GCTAGCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270686" refcenter="RIKEN_CLST_DGT" accession="DRS270686">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451668</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TGACCA-GCTAGCA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
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                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344797" center_name="RIKEN_CLST_DGT" accession="DRX344797">
        <TITLE>LShi10008_TGACCA-GCTATAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270746" refcenter="RIKEN_CLST_DGT" accession="DRS270746">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451728</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TGACCA-GCTATAG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
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            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344798" center_name="RIKEN_CLST_DGT" accession="DRX344798">
        <TITLE>LShi10008_TGACCA-GCTCATG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271100" refcenter="RIKEN_CLST_DGT" accession="DRS271100">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452082</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TGACCA-GCTCATG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344799" center_name="RIKEN_CLST_DGT" accession="DRX344799">
        <TITLE>LShi10008_TGACCA-GCTGTAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270979" refcenter="RIKEN_CLST_DGT" accession="DRS270979">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451961</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TGACCA-GCTGTAC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344800" center_name="RIKEN_CLST_DGT" accession="DRX344800">
        <TITLE>LShi10008_TGACCA-GTACATG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270704" refcenter="RIKEN_CLST_DGT" accession="DRS270704">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451686</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TGACCA-GTACATG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344801" center_name="RIKEN_CLST_DGT" accession="DRX344801">
        <TITLE>LShi10008_TGACCA-GTCACAT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270775" refcenter="RIKEN_CLST_DGT" accession="DRS270775">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451757</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TGACCA-GTCACAT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344802" center_name="RIKEN_CLST_DGT" accession="DRX344802">
        <TITLE>LShi10008_TGACCA-GTGACTC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270977" refcenter="RIKEN_CLST_DGT" accession="DRS270977">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451959</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TGACCA-GTGACTC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344803" center_name="RIKEN_CLST_DGT" accession="DRX344803">
        <TITLE>LShi10008_TGACCA-GTGCATA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270973" refcenter="RIKEN_CLST_DGT" accession="DRS270973">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451955</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TGACCA-GTGCATA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344804" center_name="RIKEN_CLST_DGT" accession="DRX344804">
        <TITLE>LShi10008_TGACCA-TACGCGT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270887" refcenter="RIKEN_CLST_DGT" accession="DRS270887">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451869</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TGACCA-TACGCGT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344805" center_name="RIKEN_CLST_DGT" accession="DRX344805">
        <TITLE>LShi10008_TGACCA-TACGCTA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270888" refcenter="RIKEN_CLST_DGT" accession="DRS270888">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451870</PRIMARY_ID>
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            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TGACCA-TACGCTA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
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                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
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                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344806" center_name="RIKEN_CLST_DGT" accession="DRX344806">
        <TITLE>LShi10008_TGACCA-TACGTAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270693" refcenter="RIKEN_CLST_DGT" accession="DRS270693">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451675</PRIMARY_ID>
                </IDENTIFIERS>
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            <LIBRARY_DESCRIPTOR>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
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                        <READ_TYPE>Forward</READ_TYPE>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
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                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
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                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
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        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
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        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344807" center_name="RIKEN_CLST_DGT" accession="DRX344807">
        <TITLE>LShi10008_TGACCA-TACGTCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
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        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270874" refcenter="RIKEN_CLST_DGT" accession="DRS270874">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451856</PRIMARY_ID>
                </IDENTIFIERS>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TGACCA-TACGTCA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
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            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344808" center_name="RIKEN_CLST_DGT" accession="DRX344808">
        <TITLE>LShi10008_TGACCA-TACTGAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271021" refcenter="RIKEN_CLST_DGT" accession="DRS271021">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452003</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TGACCA-TACTGAG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
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            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344809" center_name="RIKEN_CLST_DGT" accession="DRX344809">
        <TITLE>LShi10008_TGACCA-TAGCATC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270774" refcenter="RIKEN_CLST_DGT" accession="DRS270774">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451756</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TGACCA-TAGCATC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344810" center_name="RIKEN_CLST_DGT" accession="DRX344810">
        <TITLE>LShi10008_TGACCA-TAGCGAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270889" refcenter="RIKEN_CLST_DGT" accession="DRS270889">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451871</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TGACCA-TAGCGAC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344811" center_name="RIKEN_CLST_DGT" accession="DRX344811">
        <TITLE>LShi10008_TGACCA-TAGCGTA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270690" refcenter="RIKEN_CLST_DGT" accession="DRS270690">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451672</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TGACCA-TAGCGTA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344812" center_name="RIKEN_CLST_DGT" accession="DRX344812">
        <TITLE>LShi10008_TGACCA-TAGCTCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270703" refcenter="RIKEN_CLST_DGT" accession="DRS270703">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451685</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TGACCA-TAGCTCA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344813" center_name="RIKEN_CLST_DGT" accession="DRX344813">
        <TITLE>LShi10008_TGACCA-TAGTCAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270622" refcenter="RIKEN_CLST_DGT" accession="DRS270622">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451604</PRIMARY_ID>
                </IDENTIFIERS>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TGACCA-TAGTCAC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
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                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344814" center_name="RIKEN_CLST_DGT" accession="DRX344814">
        <TITLE>LShi10008_TGACCA-TATGCAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
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        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270685" refcenter="RIKEN_CLST_DGT" accession="DRS270685">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451667</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TGACCA-TATGCAC</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
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                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344815" center_name="RIKEN_CLST_DGT" accession="DRX344815">
        <TITLE>LShi10008_TGACCA-TCACAGT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271064" refcenter="RIKEN_CLST_DGT" accession="DRS271064">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452046</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TGACCA-TCACAGT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344816" center_name="RIKEN_CLST_DGT" accession="DRX344816">
        <TITLE>LShi10008_TGACCA-TCGCTGA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270652" refcenter="RIKEN_CLST_DGT" accession="DRS270652">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451634</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TGACCA-TCGCTGA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344817" center_name="RIKEN_CLST_DGT" accession="DRX344817">
        <TITLE>LShi10008_TGACCA-TGACTGC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270751" refcenter="RIKEN_CLST_DGT" accession="DRS270751">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451733</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TGACCA-TGACTGC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344818" center_name="RIKEN_CLST_DGT" accession="DRX344818">
        <TITLE>LShi10008_TGACCA-TGCTACA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270689" refcenter="RIKEN_CLST_DGT" accession="DRS270689">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451671</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TGACCA-TGCTACA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344819" center_name="RIKEN_CLST_DGT" accession="DRX344819">
        <TITLE>LShi10008_TGACCA-TGTCACG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270682" refcenter="RIKEN_CLST_DGT" accession="DRS270682">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451664</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TGACCA-TGTCACG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344820" center_name="RIKEN_CLST_DGT" accession="DRX344820">
        <TITLE>LShi10008_TGACCA-TGTCGCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270792" refcenter="RIKEN_CLST_DGT" accession="DRS270792">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451774</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TGACCA-TGTCGCA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344821" center_name="RIKEN_CLST_DGT" accession="DRX344821">
        <TITLE>LShi10008_TTAGGC-ACAGCTG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270949" refcenter="RIKEN_CLST_DGT" accession="DRS270949">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451931</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-ACAGCTG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344822" center_name="RIKEN_CLST_DGT" accession="DRX344822">
        <TITLE>LShi10008_TTAGGC-ACATGTC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270948" refcenter="RIKEN_CLST_DGT" accession="DRS270948">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451930</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-ACATGTC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344823" center_name="RIKEN_CLST_DGT" accession="DRX344823">
        <TITLE>LShi10008_TTAGGC-ACGATCG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270924" refcenter="RIKEN_CLST_DGT" accession="DRS270924">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451906</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-ACGATCG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344824" center_name="RIKEN_CLST_DGT" accession="DRX344824">
        <TITLE>LShi10008_TTAGGC-ACGTCGA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270866" refcenter="RIKEN_CLST_DGT" accession="DRS270866">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451848</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-ACGTCGA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344825" center_name="RIKEN_CLST_DGT" accession="DRX344825">
        <TITLE>LShi10008_TTAGGC-ACTATGC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270738" refcenter="RIKEN_CLST_DGT" accession="DRS270738">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451720</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-ACTATGC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344826" center_name="RIKEN_CLST_DGT" accession="DRX344826">
        <TITLE>LShi10008_TTAGGC-ACTGCAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270737" refcenter="RIKEN_CLST_DGT" accession="DRS270737">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451719</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-ACTGCAG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344827" center_name="RIKEN_CLST_DGT" accession="DRX344827">
        <TITLE>LShi10008_TTAGGC-AGACGCT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271145" refcenter="RIKEN_CLST_DGT" accession="DRS271145">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452127</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-AGACGCT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344828" center_name="RIKEN_CLST_DGT" accession="DRX344828">
        <TITLE>LShi10008_TTAGGC-AGCATCG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270723" refcenter="RIKEN_CLST_DGT" accession="DRS270723">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451705</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-AGCATCG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344829" center_name="RIKEN_CLST_DGT" accession="DRX344829">
        <TITLE>LShi10008_TTAGGC-AGCATGC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270948" refcenter="RIKEN_CLST_DGT" accession="DRS270948">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451930</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-AGCATGC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344830" center_name="RIKEN_CLST_DGT" accession="DRX344830">
        <TITLE>LShi10008_TTAGGC-AGCTCAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270739" refcenter="RIKEN_CLST_DGT" accession="DRS270739">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451721</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-AGCTCAG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344831" center_name="RIKEN_CLST_DGT" accession="DRX344831">
        <TITLE>LShi10008_TTAGGC-AGCTCGA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270832" refcenter="RIKEN_CLST_DGT" accession="DRS270832">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451814</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-AGCTCGA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344832" center_name="RIKEN_CLST_DGT" accession="DRX344832">
        <TITLE>LShi10008_TTAGGC-AGTACGC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270851" refcenter="RIKEN_CLST_DGT" accession="DRS270851">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451833</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-AGTACGC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344833" center_name="RIKEN_CLST_DGT" accession="DRX344833">
        <TITLE>LShi10008_TTAGGC-AGTCAGT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270869" refcenter="RIKEN_CLST_DGT" accession="DRS270869">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451851</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-AGTCAGT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344834" center_name="RIKEN_CLST_DGT" accession="DRX344834">
        <TITLE>LShi10008_TTAGGC-AGTGTCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271086" refcenter="RIKEN_CLST_DGT" accession="DRS271086">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452068</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-AGTGTCA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344835" center_name="RIKEN_CLST_DGT" accession="DRX344835">
        <TITLE>LShi10008_TTAGGC-ATACGTC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271108" refcenter="RIKEN_CLST_DGT" accession="DRS271108">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452090</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-ATACGTC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344836" center_name="RIKEN_CLST_DGT" accession="DRX344836">
        <TITLE>LShi10008_TTAGGC-ATCAGCG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270649" refcenter="RIKEN_CLST_DGT" accession="DRS270649">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451631</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-ATCAGCG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344837" center_name="RIKEN_CLST_DGT" accession="DRX344837">
        <TITLE>LShi10008_TTAGGC-ATGCACT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270698" refcenter="RIKEN_CLST_DGT" accession="DRS270698">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451680</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-ATGCACT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344838" center_name="RIKEN_CLST_DGT" accession="DRX344838">
        <TITLE>LShi10008_TTAGGC-ATGCGCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270650" refcenter="RIKEN_CLST_DGT" accession="DRS270650">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451632</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-ATGCGCA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344839" center_name="RIKEN_CLST_DGT" accession="DRX344839">
        <TITLE>LShi10008_TTAGGC-ATGTCAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270916" refcenter="RIKEN_CLST_DGT" accession="DRS270916">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451898</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-ATGTCAG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344840" center_name="RIKEN_CLST_DGT" accession="DRX344840">
        <TITLE>LShi10008_TTAGGC-CACGTGT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271151" refcenter="RIKEN_CLST_DGT" accession="DRS271151">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452133</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-CACGTGT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344841" center_name="RIKEN_CLST_DGT" accession="DRX344841">
        <TITLE>LShi10008_TTAGGC-CACTAGT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270908" refcenter="RIKEN_CLST_DGT" accession="DRS270908">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451890</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-CACTAGT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
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                        <BASE_COORD>52</BASE_COORD>
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                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
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                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344842" center_name="RIKEN_CLST_DGT" accession="DRX344842">
        <TITLE>LShi10008_TTAGGC-CACTATG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271155" refcenter="RIKEN_CLST_DGT" accession="DRS271155">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452137</PRIMARY_ID>
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            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-CACTATG</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
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                        <READ_TYPE>Forward</READ_TYPE>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
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                        <BASE_COORD>52</BASE_COORD>
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                </SPOT_DECODE_SPEC>
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        </DESIGN>
        <PLATFORM>
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                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
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        <PROCESSING>
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                <PIPE_SECTION>
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    <EXPERIMENT alias="DRX344843" center_name="RIKEN_CLST_DGT" accession="DRX344843">
        <TITLE>LShi10008_TTAGGC-CAGATCT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270830" refcenter="RIKEN_CLST_DGT" accession="DRS270830">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451812</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-CAGATCT</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
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                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344844" center_name="RIKEN_CLST_DGT" accession="DRX344844">
        <TITLE>LShi10008_TTAGGC-CAGCAGT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271111" refcenter="RIKEN_CLST_DGT" accession="DRS271111">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452093</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-CAGCAGT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
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        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344845" center_name="RIKEN_CLST_DGT" accession="DRX344845">
        <TITLE>LShi10008_TTAGGC-CAGTCTG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271149" refcenter="RIKEN_CLST_DGT" accession="DRS271149">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452131</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-CAGTCTG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344846" center_name="RIKEN_CLST_DGT" accession="DRX344846">
        <TITLE>LShi10008_TTAGGC-CAGTGTC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271091" refcenter="RIKEN_CLST_DGT" accession="DRS271091">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452073</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-CAGTGTC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344847" center_name="RIKEN_CLST_DGT" accession="DRX344847">
        <TITLE>LShi10008_TTAGGC-CATAGCT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270868" refcenter="RIKEN_CLST_DGT" accession="DRS270868">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451850</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-CATAGCT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344848" center_name="RIKEN_CLST_DGT" accession="DRX344848">
        <TITLE>LShi10008_TTAGGC-CATATCG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270938" refcenter="RIKEN_CLST_DGT" accession="DRS270938">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451920</PRIMARY_ID>
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            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-CATATCG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344849" center_name="RIKEN_CLST_DGT" accession="DRX344849">
        <TITLE>LShi10008_TTAGGC-CGACGAT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270647" refcenter="RIKEN_CLST_DGT" accession="DRS270647">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451629</PRIMARY_ID>
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            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-CGACGAT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
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            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344850" center_name="RIKEN_CLST_DGT" accession="DRX344850">
        <TITLE>LShi10008_TTAGGC-CGACGTA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
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        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271109" refcenter="RIKEN_CLST_DGT" accession="DRS271109">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452091</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-CGACGTA</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
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                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344851" center_name="RIKEN_CLST_DGT" accession="DRX344851">
        <TITLE>LShi10008_TTAGGC-CGACTGT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270720" refcenter="RIKEN_CLST_DGT" accession="DRS270720">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451702</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-CGACTGT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344852" center_name="RIKEN_CLST_DGT" accession="DRX344852">
        <TITLE>LShi10008_TTAGGC-CGATCTG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270621" refcenter="RIKEN_CLST_DGT" accession="DRS270621">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451603</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-CGATCTG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344853" center_name="RIKEN_CLST_DGT" accession="DRX344853">
        <TITLE>LShi10008_TTAGGC-CGATGCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270909" refcenter="RIKEN_CLST_DGT" accession="DRS270909">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451891</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-CGATGCA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344854" center_name="RIKEN_CLST_DGT" accession="DRX344854">
        <TITLE>LShi10008_TTAGGC-CGTACAT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270914" refcenter="RIKEN_CLST_DGT" accession="DRS270914">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451896</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-CGTACAT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344855" center_name="RIKEN_CLST_DGT" accession="DRX344855">
        <TITLE>LShi10008_TTAGGC-CGTACTG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270940" refcenter="RIKEN_CLST_DGT" accession="DRS270940">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451922</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-CGTACTG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344856" center_name="RIKEN_CLST_DGT" accession="DRX344856">
        <TITLE>LShi10008_TTAGGC-CGTCATA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270721" refcenter="RIKEN_CLST_DGT" accession="DRS270721">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451703</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-CGTCATA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344857" center_name="RIKEN_CLST_DGT" accession="DRX344857">
        <TITLE>LShi10008_TTAGGC-CTAGCTG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270722" refcenter="RIKEN_CLST_DGT" accession="DRS270722">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451704</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-CTAGCTG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344858" center_name="RIKEN_CLST_DGT" accession="DRX344858">
        <TITLE>LShi10008_TTAGGC-CTAGTAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270946" refcenter="RIKEN_CLST_DGT" accession="DRS270946">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451928</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-CTAGTAC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344859" center_name="RIKEN_CLST_DGT" accession="DRX344859">
        <TITLE>LShi10008_TTAGGC-CTAGTCG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271144" refcenter="RIKEN_CLST_DGT" accession="DRS271144">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452126</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-CTAGTCG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344860" center_name="RIKEN_CLST_DGT" accession="DRX344860">
        <TITLE>LShi10008_TTAGGC-CTATGCG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270852" refcenter="RIKEN_CLST_DGT" accession="DRS270852">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451834</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-CTATGCG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344861" center_name="RIKEN_CLST_DGT" accession="DRX344861">
        <TITLE>LShi10008_TTAGGC-CTCAGAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270638" refcenter="RIKEN_CLST_DGT" accession="DRS270638">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451620</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-CTCAGAG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344862" center_name="RIKEN_CLST_DGT" accession="DRX344862">
        <TITLE>LShi10008_TTAGGC-CTCGATA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270717" refcenter="RIKEN_CLST_DGT" accession="DRS270717">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451699</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-CTCGATA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344863" center_name="RIKEN_CLST_DGT" accession="DRX344863">
        <TITLE>LShi10008_TTAGGC-CTGATAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270922" refcenter="RIKEN_CLST_DGT" accession="DRS270922">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451904</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-CTGATAG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344864" center_name="RIKEN_CLST_DGT" accession="DRX344864">
        <TITLE>LShi10008_TTAGGC-CTGATGC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270945" refcenter="RIKEN_CLST_DGT" accession="DRS270945">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451927</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-CTGATGC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344865" center_name="RIKEN_CLST_DGT" accession="DRX344865">
        <TITLE>LShi10008_TTAGGC-GACACTG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271148" refcenter="RIKEN_CLST_DGT" accession="DRS271148">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452130</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-GACACTG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344866" center_name="RIKEN_CLST_DGT" accession="DRX344866">
        <TITLE>LShi10008_TTAGGC-GACATCG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270952" refcenter="RIKEN_CLST_DGT" accession="DRS270952">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451934</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-GACATCG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344867" center_name="RIKEN_CLST_DGT" accession="DRX344867">
        <TITLE>LShi10008_TTAGGC-GACTACT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270718" refcenter="RIKEN_CLST_DGT" accession="DRS270718">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451700</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-GACTACT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344868" center_name="RIKEN_CLST_DGT" accession="DRX344868">
        <TITLE>LShi10008_TTAGGC-GACTAGC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270950" refcenter="RIKEN_CLST_DGT" accession="DRS270950">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451932</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-GACTAGC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344869" center_name="RIKEN_CLST_DGT" accession="DRX344869">
        <TITLE>LShi10008_TTAGGC-GAGCTCT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270850" refcenter="RIKEN_CLST_DGT" accession="DRS270850">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451832</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-GAGCTCT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344870" center_name="RIKEN_CLST_DGT" accession="DRX344870">
        <TITLE>LShi10008_TTAGGC-GATATGC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271152" refcenter="RIKEN_CLST_DGT" accession="DRS271152">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452134</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-GATATGC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344871" center_name="RIKEN_CLST_DGT" accession="DRX344871">
        <TITLE>LShi10008_TTAGGC-GATCACG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270913" refcenter="RIKEN_CLST_DGT" accession="DRS270913">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451895</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-GATCACG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344872" center_name="RIKEN_CLST_DGT" accession="DRX344872">
        <TITLE>LShi10008_TTAGGC-GATCGCT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270736" refcenter="RIKEN_CLST_DGT" accession="DRS270736">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451718</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-GATCGCT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344873" center_name="RIKEN_CLST_DGT" accession="DRX344873">
        <TITLE>LShi10008_TTAGGC-GATCTCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270912" refcenter="RIKEN_CLST_DGT" accession="DRS270912">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451894</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-GATCTCA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344874" center_name="RIKEN_CLST_DGT" accession="DRX344874">
        <TITLE>LShi10008_TTAGGC-GATGCAT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270719" refcenter="RIKEN_CLST_DGT" accession="DRS270719">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451701</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-GATGCAT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344875" center_name="RIKEN_CLST_DGT" accession="DRX344875">
        <TITLE>LShi10008_TTAGGC-GCAGACT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270951" refcenter="RIKEN_CLST_DGT" accession="DRS270951">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451933</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-GCAGACT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344876" center_name="RIKEN_CLST_DGT" accession="DRX344876">
        <TITLE>LShi10008_TTAGGC-GCATATG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271153" refcenter="RIKEN_CLST_DGT" accession="DRS271153">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452135</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-GCATATG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344877" center_name="RIKEN_CLST_DGT" accession="DRX344877">
        <TITLE>LShi10008_TTAGGC-GCGTATA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270939" refcenter="RIKEN_CLST_DGT" accession="DRS270939">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451921</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-GCGTATA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344878" center_name="RIKEN_CLST_DGT" accession="DRX344878">
        <TITLE>LShi10008_TTAGGC-GCTACGA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270831" refcenter="RIKEN_CLST_DGT" accession="DRS270831">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451813</PRIMARY_ID>
                </IDENTIFIERS>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-GCTACGA</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
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                        <READ_TYPE>Forward</READ_TYPE>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
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                </SPOT_DECODE_SPEC>
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        </DESIGN>
        <PLATFORM>
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                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
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        </PLATFORM>
        <PROCESSING>
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                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
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            </PIPELINE>
        </PROCESSING>
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    <EXPERIMENT alias="DRX344879" center_name="RIKEN_CLST_DGT" accession="DRX344879">
        <TITLE>LShi10008_TTAGGC-GCTAGCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270676" refcenter="RIKEN_CLST_DGT" accession="DRS270676">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451658</PRIMARY_ID>
                </IDENTIFIERS>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-GCTAGCA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
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            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344880" center_name="RIKEN_CLST_DGT" accession="DRX344880">
        <TITLE>LShi10008_TTAGGC-GCTATAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271110" refcenter="RIKEN_CLST_DGT" accession="DRS271110">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452092</PRIMARY_ID>
                </IDENTIFIERS>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-GCTATAG</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344881" center_name="RIKEN_CLST_DGT" accession="DRX344881">
        <TITLE>LShi10008_TTAGGC-GCTCATG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271150" refcenter="RIKEN_CLST_DGT" accession="DRS271150">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452132</PRIMARY_ID>
                </IDENTIFIERS>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-GCTCATG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344882" center_name="RIKEN_CLST_DGT" accession="DRX344882">
        <TITLE>LShi10008_TTAGGC-GCTGTAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270917" refcenter="RIKEN_CLST_DGT" accession="DRS270917">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451899</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-GCTGTAC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344883" center_name="RIKEN_CLST_DGT" accession="DRX344883">
        <TITLE>LShi10008_TTAGGC-GTACATG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270741" refcenter="RIKEN_CLST_DGT" accession="DRS270741">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451723</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-GTACATG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344884" center_name="RIKEN_CLST_DGT" accession="DRX344884">
        <TITLE>LShi10008_TTAGGC-GTAGCAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270925" refcenter="RIKEN_CLST_DGT" accession="DRS270925">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451907</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-GTAGCAC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
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                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
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            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344885" center_name="RIKEN_CLST_DGT" accession="DRX344885">
        <TITLE>LShi10008_TTAGGC-GTATAGC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
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        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270882" refcenter="RIKEN_CLST_DGT" accession="DRS270882">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451864</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-GTATAGC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
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            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344886" center_name="RIKEN_CLST_DGT" accession="DRX344886">
        <TITLE>LShi10008_TTAGGC-GTCACAT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
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        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271147" refcenter="RIKEN_CLST_DGT" accession="DRS271147">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452129</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-GTCACAT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
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                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344887" center_name="RIKEN_CLST_DGT" accession="DRX344887">
        <TITLE>LShi10008_TTAGGC-GTGACTC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270915" refcenter="RIKEN_CLST_DGT" accession="DRS270915">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451897</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-GTGACTC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344888" center_name="RIKEN_CLST_DGT" accession="DRX344888">
        <TITLE>LShi10008_TTAGGC-GTGCATA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270853" refcenter="RIKEN_CLST_DGT" accession="DRS270853">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451835</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-GTGCATA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344889" center_name="RIKEN_CLST_DGT" accession="DRX344889">
        <TITLE>LShi10008_TTAGGC-TACGCGT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271087" refcenter="RIKEN_CLST_DGT" accession="DRS271087">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452069</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-TACGCGT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344890" center_name="RIKEN_CLST_DGT" accession="DRX344890">
        <TITLE>LShi10008_TTAGGC-TACGCTA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271088" refcenter="RIKEN_CLST_DGT" accession="DRS271088">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452070</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-TACGCTA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344891" center_name="RIKEN_CLST_DGT" accession="DRX344891">
        <TITLE>LShi10008_TTAGGC-TACGTAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270697" refcenter="RIKEN_CLST_DGT" accession="DRS270697">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451679</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-TACGTAG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344892" center_name="RIKEN_CLST_DGT" accession="DRX344892">
        <TITLE>LShi10008_TTAGGC-TACGTCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270716" refcenter="RIKEN_CLST_DGT" accession="DRS270716">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451698</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-TACGTCA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344893" center_name="RIKEN_CLST_DGT" accession="DRX344893">
        <TITLE>LShi10008_TTAGGC-TACTGAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270867" refcenter="RIKEN_CLST_DGT" accession="DRS270867">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451849</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-TACTGAG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344894" center_name="RIKEN_CLST_DGT" accession="DRX344894">
        <TITLE>LShi10008_TTAGGC-TAGCATC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271146" refcenter="RIKEN_CLST_DGT" accession="DRS271146">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452128</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-TAGCATC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344895" center_name="RIKEN_CLST_DGT" accession="DRX344895">
        <TITLE>LShi10008_TTAGGC-TAGCGAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271089" refcenter="RIKEN_CLST_DGT" accession="DRS271089">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452071</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-TAGCGAC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
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                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344896" center_name="RIKEN_CLST_DGT" accession="DRX344896">
        <TITLE>LShi10008_TTAGGC-TAGCGTA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271173" refcenter="RIKEN_CLST_DGT" accession="DRS271173">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452155</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-TAGCGTA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
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                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
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                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
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        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344897" center_name="RIKEN_CLST_DGT" accession="DRX344897">
        <TITLE>LShi10008_TTAGGC-TAGCTCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270740" refcenter="RIKEN_CLST_DGT" accession="DRS270740">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451722</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-TAGCTCA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344898" center_name="RIKEN_CLST_DGT" accession="DRX344898">
        <TITLE>LShi10008_TTAGGC-TAGTCAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270620" refcenter="RIKEN_CLST_DGT" accession="DRS270620">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451602</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-TAGTCAC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344899" center_name="RIKEN_CLST_DGT" accession="DRX344899">
        <TITLE>LShi10008_TTAGGC-TATGCAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270675" refcenter="RIKEN_CLST_DGT" accession="DRS270675">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451657</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-TATGCAC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344900" center_name="RIKEN_CLST_DGT" accession="DRX344900">
        <TITLE>LShi10008_TTAGGC-TCACAGT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270947" refcenter="RIKEN_CLST_DGT" accession="DRS270947">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451929</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-TCACAGT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344901" center_name="RIKEN_CLST_DGT" accession="DRX344901">
        <TITLE>LShi10008_TTAGGC-TCACGTG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270884" refcenter="RIKEN_CLST_DGT" accession="DRS270884">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451866</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-TCACGTG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344902" center_name="RIKEN_CLST_DGT" accession="DRX344902">
        <TITLE>LShi10008_TTAGGC-TCGATAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270911" refcenter="RIKEN_CLST_DGT" accession="DRS270911">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451893</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-TCGATAG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344903" center_name="RIKEN_CLST_DGT" accession="DRX344903">
        <TITLE>LShi10008_TTAGGC-TCGATCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270910" refcenter="RIKEN_CLST_DGT" accession="DRS270910">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451892</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-TCGATCA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344904" center_name="RIKEN_CLST_DGT" accession="DRX344904">
        <TITLE>LShi10008_TTAGGC-TCGCTGA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270648" refcenter="RIKEN_CLST_DGT" accession="DRS270648">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451630</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-TCGCTGA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
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                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344905" center_name="RIKEN_CLST_DGT" accession="DRX344905">
        <TITLE>LShi10008_TTAGGC-TCGTGAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270639" refcenter="RIKEN_CLST_DGT" accession="DRS270639">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451621</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-TCGTGAC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344906" center_name="RIKEN_CLST_DGT" accession="DRX344906">
        <TITLE>LShi10008_TTAGGC-TCTCGAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270953" refcenter="RIKEN_CLST_DGT" accession="DRS270953">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451935</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-TCTCGAG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344907" center_name="RIKEN_CLST_DGT" accession="DRX344907">
        <TITLE>LShi10008_TTAGGC-TGACTCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270883" refcenter="RIKEN_CLST_DGT" accession="DRS270883">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451865</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-TGACTCA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344908" center_name="RIKEN_CLST_DGT" accession="DRX344908">
        <TITLE>LShi10008_TTAGGC-TGACTGC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270833" refcenter="RIKEN_CLST_DGT" accession="DRS270833">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451815</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-TGACTGC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344909" center_name="RIKEN_CLST_DGT" accession="DRX344909">
        <TITLE>LShi10008_TTAGGC-TGATCAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270923" refcenter="RIKEN_CLST_DGT" accession="DRS270923">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451905</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-TGATCAC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344910" center_name="RIKEN_CLST_DGT" accession="DRX344910">
        <TITLE>LShi10008_TTAGGC-TGCTACA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271172" refcenter="RIKEN_CLST_DGT" accession="DRS271172">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452154</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-TGCTACA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344911" center_name="RIKEN_CLST_DGT" accession="DRX344911">
        <TITLE>LShi10008_TTAGGC-TGTCACG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270941" refcenter="RIKEN_CLST_DGT" accession="DRS270941">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451923</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-TGTCACG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344912" center_name="RIKEN_CLST_DGT" accession="DRX344912">
        <TITLE>LShi10008_TTAGGC-TGTCAGA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS270885" refcenter="RIKEN_CLST_DGT" accession="DRS270885">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00451867</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-TGTCAGA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344913" center_name="RIKEN_CLST_DGT" accession="DRX344913">
        <TITLE>LShi10008_TTAGGC-TGTCGAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271154" refcenter="RIKEN_CLST_DGT" accession="DRS271154">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452136</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-TGTCGAC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344914" center_name="RIKEN_CLST_DGT" accession="DRX344914">
        <TITLE>LShi10008_TTAGGC-TGTCGCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271090" refcenter="RIKEN_CLST_DGT" accession="DRS271090">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452072</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10008_TTAGGC-TGTCGCA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344915" center_name="RIKEN_CLST_DGT" accession="DRX344915">
        <TITLE>LShi10030_ACAGTG-ACAGCTG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271208" refcenter="RIKEN_CLST_DGT" accession="DRS271208">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452190</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACAGTG-ACAGCTG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344916" center_name="RIKEN_CLST_DGT" accession="DRX344916">
        <TITLE>LShi10030_ACAGTG-ACATGTC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271207" refcenter="RIKEN_CLST_DGT" accession="DRS271207">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452189</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACAGTG-ACATGTC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344917" center_name="RIKEN_CLST_DGT" accession="DRX344917">
        <TITLE>LShi10030_ACAGTG-AGACGCT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271325" refcenter="RIKEN_CLST_DGT" accession="DRS271325">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452307</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACAGTG-AGACGCT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344918" center_name="RIKEN_CLST_DGT" accession="DRX344918">
        <TITLE>LShi10030_ACAGTG-AGCATGC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271206" refcenter="RIKEN_CLST_DGT" accession="DRS271206">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452188</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACAGTG-AGCATGC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344919" center_name="RIKEN_CLST_DGT" accession="DRX344919">
        <TITLE>LShi10030_ACAGTG-AGCTCGA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271306" refcenter="RIKEN_CLST_DGT" accession="DRS271306">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452288</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACAGTG-AGCTCGA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344920" center_name="RIKEN_CLST_DGT" accession="DRX344920">
        <TITLE>LShi10030_ACAGTG-AGTACGC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271267" refcenter="RIKEN_CLST_DGT" accession="DRS271267">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452249</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACAGTG-AGTACGC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344921" center_name="RIKEN_CLST_DGT" accession="DRX344921">
        <TITLE>LShi10030_ACAGTG-AGTGTCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271294" refcenter="RIKEN_CLST_DGT" accession="DRS271294">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452276</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACAGTG-AGTGTCA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344922" center_name="RIKEN_CLST_DGT" accession="DRX344922">
        <TITLE>LShi10030_ACAGTG-ATACGTC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271350" refcenter="RIKEN_CLST_DGT" accession="DRS271350">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452332</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACAGTG-ATACGTC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
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                        <BASE_COORD>52</BASE_COORD>
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                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
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        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
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                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344923" center_name="RIKEN_CLST_DGT" accession="DRX344923">
        <TITLE>LShi10030_ACAGTG-ATGCACT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271204" refcenter="RIKEN_CLST_DGT" accession="DRS271204">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452186</PRIMARY_ID>
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            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACAGTG-ATGCACT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
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                        <BASE_COORD>52</BASE_COORD>
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        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
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        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
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                    <PROGRAM></PROGRAM>
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            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344924" center_name="RIKEN_CLST_DGT" accession="DRX344924">
        <TITLE>LShi10030_ACAGTG-CACGTGT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271349" refcenter="RIKEN_CLST_DGT" accession="DRS271349">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452331</PRIMARY_ID>
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            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACAGTG-CACGTGT</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344925" center_name="RIKEN_CLST_DGT" accession="DRX344925">
        <TITLE>LShi10030_ACAGTG-CACTATG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271319" refcenter="RIKEN_CLST_DGT" accession="DRS271319">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452301</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACAGTG-CACTATG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344926" center_name="RIKEN_CLST_DGT" accession="DRX344926">
        <TITLE>LShi10030_ACAGTG-CAGATCT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271264" refcenter="RIKEN_CLST_DGT" accession="DRS271264">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452246</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACAGTG-CAGATCT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344927" center_name="RIKEN_CLST_DGT" accession="DRX344927">
        <TITLE>LShi10030_ACAGTG-CAGCAGT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271263" refcenter="RIKEN_CLST_DGT" accession="DRS271263">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452245</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACAGTG-CAGCAGT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344928" center_name="RIKEN_CLST_DGT" accession="DRX344928">
        <TITLE>LShi10030_ACAGTG-CAGTCTG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271347" refcenter="RIKEN_CLST_DGT" accession="DRS271347">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452329</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACAGTG-CAGTCTG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344929" center_name="RIKEN_CLST_DGT" accession="DRX344929">
        <TITLE>LShi10030_ACAGTG-CAGTGTC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271345" refcenter="RIKEN_CLST_DGT" accession="DRS271345">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452327</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACAGTG-CAGTGTC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344930" center_name="RIKEN_CLST_DGT" accession="DRX344930">
        <TITLE>LShi10030_ACAGTG-CGACGAT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271176" refcenter="RIKEN_CLST_DGT" accession="DRS271176">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452158</PRIMARY_ID>
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            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACAGTG-CGACGAT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
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            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344931" center_name="RIKEN_CLST_DGT" accession="DRX344931">
        <TITLE>LShi10030_ACAGTG-CGACGTA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
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        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271351" refcenter="RIKEN_CLST_DGT" accession="DRS271351">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452333</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACAGTG-CGACGTA</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
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            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
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                        <BASE_COORD>52</BASE_COORD>
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                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
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        <PROCESSING>
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                <PIPE_SECTION>
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            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344932" center_name="RIKEN_CLST_DGT" accession="DRX344932">
        <TITLE>LShi10030_ACAGTG-CGATCTG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
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        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271199" refcenter="RIKEN_CLST_DGT" accession="DRS271199">
                <IDENTIFIERS>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
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                <LIBRARY_LAYOUT>
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                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
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        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
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        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271201" refcenter="RIKEN_CLST_DGT" accession="DRS271201">
                <IDENTIFIERS>
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            <LIBRARY_DESCRIPTOR>
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                <LIBRARY_LAYOUT>
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                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
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                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
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                        <BASE_COORD>52</BASE_COORD>
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            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
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        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
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            </PIPELINE>
        </PROCESSING>
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    <EXPERIMENT alias="DRX344934" center_name="RIKEN_CLST_DGT" accession="DRX344934">
        <TITLE>LShi10030_ACAGTG-CTAGTAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271309" refcenter="RIKEN_CLST_DGT" accession="DRS271309">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452291</PRIMARY_ID>
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            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACAGTG-CTAGTAC</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
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                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
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                        <BASE_COORD>52</BASE_COORD>
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            </SPOT_DESCRIPTOR>
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        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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                    <PROGRAM></PROGRAM>
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            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344935" center_name="RIKEN_CLST_DGT" accession="DRX344935">
        <TITLE>LShi10030_ACAGTG-CTAGTCG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271324" refcenter="RIKEN_CLST_DGT" accession="DRS271324">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452306</PRIMARY_ID>
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            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACAGTG-CTAGTCG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
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                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344936" center_name="RIKEN_CLST_DGT" accession="DRX344936">
        <TITLE>LShi10030_ACAGTG-CTGATGC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271308" refcenter="RIKEN_CLST_DGT" accession="DRS271308">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452290</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACAGTG-CTGATGC</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
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                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
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                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
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        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
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    <EXPERIMENT alias="DRX344937" center_name="RIKEN_CLST_DGT" accession="DRX344937">
        <TITLE>LShi10030_ACAGTG-GACACTG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271346" refcenter="RIKEN_CLST_DGT" accession="DRS271346">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452328</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACAGTG-GACACTG</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
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            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
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            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
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        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
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                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
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            </PIPELINE>
        </PROCESSING>
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    <EXPERIMENT alias="DRX344938" center_name="RIKEN_CLST_DGT" accession="DRX344938">
        <TITLE>LShi10030_ACAGTG-GACATCG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271322" refcenter="RIKEN_CLST_DGT" accession="DRS271322">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452304</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACAGTG-GACATCG</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
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                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
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            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
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        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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                    <PROGRAM></PROGRAM>
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            </PIPELINE>
        </PROCESSING>
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    <EXPERIMENT alias="DRX344939" center_name="RIKEN_CLST_DGT" accession="DRX344939">
        <TITLE>LShi10030_ACAGTG-GACTAGC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271320" refcenter="RIKEN_CLST_DGT" accession="DRS271320">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452302</PRIMARY_ID>
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            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACAGTG-GACTAGC</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
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        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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                    <PROGRAM></PROGRAM>
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            </PIPELINE>
        </PROCESSING>
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    <EXPERIMENT alias="DRX344940" center_name="RIKEN_CLST_DGT" accession="DRX344940">
        <TITLE>LShi10030_ACAGTG-GACTGCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271317" refcenter="RIKEN_CLST_DGT" accession="DRS271317">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452299</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACAGTG-GACTGCA</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
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                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
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                        <BASE_COORD>52</BASE_COORD>
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                </SPOT_DECODE_SPEC>
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        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344941" center_name="RIKEN_CLST_DGT" accession="DRX344941">
        <TITLE>LShi10030_ACAGTG-GAGCTCT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271266" refcenter="RIKEN_CLST_DGT" accession="DRS271266">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452248</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
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                        <READ_CLASS>Application Read</READ_CLASS>
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                        <BASE_COORD>52</BASE_COORD>
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        <PLATFORM>
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                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
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        <PROCESSING>
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                <PIPE_SECTION>
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        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271200" refcenter="RIKEN_CLST_DGT" accession="DRS271200">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452182</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACAGTG-GATATGC</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
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            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344943" center_name="RIKEN_CLST_DGT" accession="DRX344943">
        <TITLE>LShi10030_ACAGTG-GATCGTA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271316" refcenter="RIKEN_CLST_DGT" accession="DRS271316">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452298</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACAGTG-GATCGTA</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
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                        <BASE_COORD>52</BASE_COORD>
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        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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                    <PROGRAM></PROGRAM>
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            </PIPELINE>
        </PROCESSING>
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    <EXPERIMENT alias="DRX344944" center_name="RIKEN_CLST_DGT" accession="DRX344944">
        <TITLE>LShi10030_ACAGTG-GCAGACT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271321" refcenter="RIKEN_CLST_DGT" accession="DRS271321">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452303</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACAGTG-GCAGACT</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344945" center_name="RIKEN_CLST_DGT" accession="DRX344945">
        <TITLE>LShi10030_ACAGTG-GCATATG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271201" refcenter="RIKEN_CLST_DGT" accession="DRS271201">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452183</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACAGTG-GCATATG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344946" center_name="RIKEN_CLST_DGT" accession="DRX344946">
        <TITLE>LShi10030_ACAGTG-GCTACGA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271265" refcenter="RIKEN_CLST_DGT" accession="DRS271265">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452247</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACAGTG-GCTACGA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344947" center_name="RIKEN_CLST_DGT" accession="DRX344947">
        <TITLE>LShi10030_ACAGTG-GCTATAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271262" refcenter="RIKEN_CLST_DGT" accession="DRS271262">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452244</PRIMARY_ID>
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            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACAGTG-GCTATAG</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
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            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
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                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
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        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
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                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
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            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344948" center_name="RIKEN_CLST_DGT" accession="DRX344948">
        <TITLE>LShi10030_ACAGTG-GCTCATG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
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                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
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        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271348" refcenter="RIKEN_CLST_DGT" accession="DRS271348">
                <IDENTIFIERS>
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                <LIBRARY_NAME>LShi10030_ACAGTG-GCTCATG</LIBRARY_NAME>
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                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
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            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
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                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
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        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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                    <PROGRAM></PROGRAM>
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            </PIPELINE>
        </PROCESSING>
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    <EXPERIMENT alias="DRX344949" center_name="RIKEN_CLST_DGT" accession="DRX344949">
        <TITLE>LShi10030_ACAGTG-GTCACAT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
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        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271293" refcenter="RIKEN_CLST_DGT" accession="DRS271293">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452275</PRIMARY_ID>
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                <LIBRARY_NAME>LShi10030_ACAGTG-GTCACAT</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
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                    <SINGLE/>
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                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
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                <PIPE_SECTION>
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        </PROCESSING>
    </EXPERIMENT>
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        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271295" refcenter="RIKEN_CLST_DGT" accession="DRS271295">
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                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
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            <SPOT_DESCRIPTOR>
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        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
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                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
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                        <READ_INDEX>1</READ_INDEX>
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                <PIPE_SECTION>
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        <TITLE>LShi10030_ACAGTG-TACGTAG.experiment</TITLE>
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        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
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                <IDENTIFIERS>
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            <LIBRARY_DESCRIPTOR>
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                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
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            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
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                    <READ_SPEC>
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                        <READ_INDEX>1</READ_INDEX>
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        <TITLE>LShi10030_ACAGTG-TAGCATC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
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        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271292" refcenter="RIKEN_CLST_DGT" accession="DRS271292">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452274</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
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                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
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        </DESIGN>
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                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
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                <PIPE_SECTION>
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                    <VERSION></VERSION>
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            </PIPELINE>
        </PROCESSING>
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    <EXPERIMENT alias="DRX344954" center_name="RIKEN_CLST_DGT" accession="DRX344954">
        <TITLE>LShi10030_ACAGTG-TAGCGAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
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        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271343" refcenter="RIKEN_CLST_DGT" accession="DRS271343">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452325</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
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                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
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                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
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        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
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                <PIPE_SECTION>
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                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
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            </PIPELINE>
        </PROCESSING>
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        <TITLE>LShi10030_ACAGTG-TAGTCAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
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        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271198" refcenter="RIKEN_CLST_DGT" accession="DRS271198">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452180</PRIMARY_ID>
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                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
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                        <READ_CLASS>Application Read</READ_CLASS>
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                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
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                    <PROGRAM></PROGRAM>
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            </PIPELINE>
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        <TITLE>LShi10030_ACAGTG-TCACAGT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
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        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271205" refcenter="RIKEN_CLST_DGT" accession="DRS271205">
                <IDENTIFIERS>
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            <LIBRARY_DESCRIPTOR>
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                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
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                        <READ_CLASS>Application Read</READ_CLASS>
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                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
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                <PIPE_SECTION>
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        <TITLE>LShi10030_ACAGTG-TCGCTGA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
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        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271177" refcenter="RIKEN_CLST_DGT" accession="DRS271177">
                <IDENTIFIERS>
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                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
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                    <SPOT_LENGTH>102</SPOT_LENGTH>
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                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
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                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
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        <TITLE>LShi10030_ACAGTG-TCTCGAG.experiment</TITLE>
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                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
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        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271323" refcenter="RIKEN_CLST_DGT" accession="DRS271323">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452305</PRIMARY_ID>
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                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
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                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344959" center_name="RIKEN_CLST_DGT" accession="DRX344959">
        <TITLE>LShi10030_ACAGTG-TGACTGC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271307" refcenter="RIKEN_CLST_DGT" accession="DRS271307">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452289</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACAGTG-TGACTGC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
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                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
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                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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                    <PROGRAM></PROGRAM>
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            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344960" center_name="RIKEN_CLST_DGT" accession="DRX344960">
        <TITLE>LShi10030_ACAGTG-TGTCACG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271202" refcenter="RIKEN_CLST_DGT" accession="DRS271202">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452184</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACAGTG-TGTCACG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344961" center_name="RIKEN_CLST_DGT" accession="DRX344961">
        <TITLE>LShi10030_ACAGTG-TGTCGAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271318" refcenter="RIKEN_CLST_DGT" accession="DRS271318">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452300</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACAGTG-TGTCGAC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344962" center_name="RIKEN_CLST_DGT" accession="DRX344962">
        <TITLE>LShi10030_ACAGTG-TGTCGCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271344" refcenter="RIKEN_CLST_DGT" accession="DRS271344">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452326</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACAGTG-TGTCGCA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344963" center_name="RIKEN_CLST_DGT" accession="DRX344963">
        <TITLE>LShi10030_ACTTGA-ACGATCG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271261" refcenter="RIKEN_CLST_DGT" accession="DRS271261">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452243</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACTTGA-ACGATCG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344964" center_name="RIKEN_CLST_DGT" accession="DRX344964">
        <TITLE>LShi10030_ACTTGA-ACGTCGA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271191" refcenter="RIKEN_CLST_DGT" accession="DRS271191">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452173</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACTTGA-ACGTCGA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344965" center_name="RIKEN_CLST_DGT" accession="DRX344965">
        <TITLE>LShi10030_ACTTGA-ACTATGC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271260" refcenter="RIKEN_CLST_DGT" accession="DRS271260">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452242</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACTTGA-ACTATGC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344966" center_name="RIKEN_CLST_DGT" accession="DRX344966">
        <TITLE>LShi10030_ACTTGA-ACTGCAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271192" refcenter="RIKEN_CLST_DGT" accession="DRS271192">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452174</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACTTGA-ACTGCAG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344967" center_name="RIKEN_CLST_DGT" accession="DRX344967">
        <TITLE>LShi10030_ACTTGA-AGCATCG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271297" refcenter="RIKEN_CLST_DGT" accession="DRS271297">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452279</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACTTGA-AGCATCG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
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                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
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                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
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                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344968" center_name="RIKEN_CLST_DGT" accession="DRX344968">
        <TITLE>LShi10030_ACTTGA-AGCTCAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271252" refcenter="RIKEN_CLST_DGT" accession="DRS271252">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452234</PRIMARY_ID>
                </IDENTIFIERS>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACTTGA-AGCTCAG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
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                        <BASE_COORD>52</BASE_COORD>
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                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
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        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
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        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
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        </PROCESSING>
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    <EXPERIMENT alias="DRX344969" center_name="RIKEN_CLST_DGT" accession="DRX344969">
        <TITLE>LShi10030_ACTTGA-AGTCAGT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271246" refcenter="RIKEN_CLST_DGT" accession="DRS271246">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452228</PRIMARY_ID>
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            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACTTGA-AGTCAGT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
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                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344970" center_name="RIKEN_CLST_DGT" accession="DRX344970">
        <TITLE>LShi10030_ACTTGA-ATCAGCG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271248" refcenter="RIKEN_CLST_DGT" accession="DRS271248">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452230</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACTTGA-ATCAGCG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344971" center_name="RIKEN_CLST_DGT" accession="DRX344971">
        <TITLE>LShi10030_ACTTGA-ATGCGCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271354" refcenter="RIKEN_CLST_DGT" accession="DRS271354">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452336</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACTTGA-ATGCGCA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344972" center_name="RIKEN_CLST_DGT" accession="DRX344972">
        <TITLE>LShi10030_ACTTGA-ATGTCAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271190" refcenter="RIKEN_CLST_DGT" accession="DRS271190">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452172</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACTTGA-ATGTCAG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344973" center_name="RIKEN_CLST_DGT" accession="DRX344973">
        <TITLE>LShi10030_ACTTGA-CACTAGT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271254" refcenter="RIKEN_CLST_DGT" accession="DRS271254">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452236</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACTTGA-CACTAGT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344974" center_name="RIKEN_CLST_DGT" accession="DRX344974">
        <TITLE>LShi10030_ACTTGA-CATAGCT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271359" refcenter="RIKEN_CLST_DGT" accession="DRS271359">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452341</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACTTGA-CATAGCT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344975" center_name="RIKEN_CLST_DGT" accession="DRX344975">
        <TITLE>LShi10030_ACTTGA-CATATCG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271244" refcenter="RIKEN_CLST_DGT" accession="DRS271244">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452226</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACTTGA-CATATCG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344976" center_name="RIKEN_CLST_DGT" accession="DRX344976">
        <TITLE>LShi10030_ACTTGA-CGACTGT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271259" refcenter="RIKEN_CLST_DGT" accession="DRS271259">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452241</PRIMARY_ID>
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            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACTTGA-CGACTGT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344977" center_name="RIKEN_CLST_DGT" accession="DRX344977">
        <TITLE>LShi10030_ACTTGA-CGATGCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271221" refcenter="RIKEN_CLST_DGT" accession="DRS271221">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452203</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACTTGA-CGATGCA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
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            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344978" center_name="RIKEN_CLST_DGT" accession="DRX344978">
        <TITLE>LShi10030_ACTTGA-CGTACAT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271223" refcenter="RIKEN_CLST_DGT" accession="DRS271223">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452205</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACTTGA-CGTACAT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344979" center_name="RIKEN_CLST_DGT" accession="DRX344979">
        <TITLE>LShi10030_ACTTGA-CGTCATA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271251" refcenter="RIKEN_CLST_DGT" accession="DRS271251">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452233</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACTTGA-CGTCATA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344980" center_name="RIKEN_CLST_DGT" accession="DRX344980">
        <TITLE>LShi10030_ACTTGA-CTAGCTG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271224" refcenter="RIKEN_CLST_DGT" accession="DRS271224">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452206</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACTTGA-CTAGCTG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344981" center_name="RIKEN_CLST_DGT" accession="DRX344981">
        <TITLE>LShi10030_ACTTGA-CTATGCG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271310" refcenter="RIKEN_CLST_DGT" accession="DRS271310">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452292</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACTTGA-CTATGCG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344982" center_name="RIKEN_CLST_DGT" accession="DRX344982">
        <TITLE>LShi10030_ACTTGA-CTCAGAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271249" refcenter="RIKEN_CLST_DGT" accession="DRS271249">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452231</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACTTGA-CTCAGAG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344983" center_name="RIKEN_CLST_DGT" accession="DRX344983">
        <TITLE>LShi10030_ACTTGA-CTCGATA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271245" refcenter="RIKEN_CLST_DGT" accession="DRS271245">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452227</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACTTGA-CTCGATA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344984" center_name="RIKEN_CLST_DGT" accession="DRX344984">
        <TITLE>LShi10030_ACTTGA-CTGATAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271313" refcenter="RIKEN_CLST_DGT" accession="DRS271313">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452295</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACTTGA-CTGATAG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344985" center_name="RIKEN_CLST_DGT" accession="DRX344985">
        <TITLE>LShi10030_ACTTGA-GACTACT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271311" refcenter="RIKEN_CLST_DGT" accession="DRS271311">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452293</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACTTGA-GACTACT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
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                        <BASE_COORD>52</BASE_COORD>
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                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
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                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344986" center_name="RIKEN_CLST_DGT" accession="DRX344986">
        <TITLE>LShi10030_ACTTGA-GATCACG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271250" refcenter="RIKEN_CLST_DGT" accession="DRS271250">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452232</PRIMARY_ID>
                </IDENTIFIERS>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACTTGA-GATCACG</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
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                        <READ_TYPE>Forward</READ_TYPE>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
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                        <BASE_COORD>52</BASE_COORD>
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                </SPOT_DECODE_SPEC>
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        </DESIGN>
        <PLATFORM>
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        <PROCESSING>
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                <PIPE_SECTION>
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        </PROCESSING>
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    <EXPERIMENT alias="DRX344987" center_name="RIKEN_CLST_DGT" accession="DRX344987">
        <TITLE>LShi10030_ACTTGA-GATCGCT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271312" refcenter="RIKEN_CLST_DGT" accession="DRS271312">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452294</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACTTGA-GATCGCT</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
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                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
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            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344988" center_name="RIKEN_CLST_DGT" accession="DRX344988">
        <TITLE>LShi10030_ACTTGA-GATCTCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271258" refcenter="RIKEN_CLST_DGT" accession="DRS271258">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452240</PRIMARY_ID>
                </IDENTIFIERS>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACTTGA-GATCTCA</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
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        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
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            </PIPELINE>
        </PROCESSING>
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    <EXPERIMENT alias="DRX344989" center_name="RIKEN_CLST_DGT" accession="DRX344989">
        <TITLE>LShi10030_ACTTGA-GATGCAT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271315" refcenter="RIKEN_CLST_DGT" accession="DRS271315">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452297</PRIMARY_ID>
                </IDENTIFIERS>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACTTGA-GATGCAT</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344990" center_name="RIKEN_CLST_DGT" accession="DRX344990">
        <TITLE>LShi10030_ACTTGA-GCGTATA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271189" refcenter="RIKEN_CLST_DGT" accession="DRS271189">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452171</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACTTGA-GCGTATA</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
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                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344991" center_name="RIKEN_CLST_DGT" accession="DRX344991">
        <TITLE>LShi10030_ACTTGA-GCTAGCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271356" refcenter="RIKEN_CLST_DGT" accession="DRS271356">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452338</PRIMARY_ID>
                </IDENTIFIERS>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACTTGA-GCTAGCA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344992" center_name="RIKEN_CLST_DGT" accession="DRX344992">
        <TITLE>LShi10030_ACTTGA-GCTGTAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
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        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271256" refcenter="RIKEN_CLST_DGT" accession="DRS271256">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452238</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACTTGA-GCTGTAC</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
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                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
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            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344993" center_name="RIKEN_CLST_DGT" accession="DRX344993">
        <TITLE>LShi10030_ACTTGA-GTACATG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
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        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271298" refcenter="RIKEN_CLST_DGT" accession="DRS271298">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452280</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACTTGA-GTACATG</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
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            <PIPELINE>
                <PIPE_SECTION>
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                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
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        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344994" center_name="RIKEN_CLST_DGT" accession="DRX344994">
        <TITLE>LShi10030_ACTTGA-GTAGCAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
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        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271253" refcenter="RIKEN_CLST_DGT" accession="DRS271253">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452235</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACTTGA-GTAGCAC</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
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                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
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                        <READ_TYPE>Forward</READ_TYPE>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
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                        <BASE_COORD>52</BASE_COORD>
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                </SPOT_DECODE_SPEC>
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        </DESIGN>
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                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
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        </PLATFORM>
        <PROCESSING>
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                <PIPE_SECTION>
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                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
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            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344995" center_name="RIKEN_CLST_DGT" accession="DRX344995">
        <TITLE>LShi10030_ACTTGA-GTATAGC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271226" refcenter="RIKEN_CLST_DGT" accession="DRS271226">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452208</PRIMARY_ID>
                </IDENTIFIERS>
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            <LIBRARY_DESCRIPTOR>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
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                    <READ_SPEC>
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                        <READ_INDEX>1</READ_INDEX>
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                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
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                <PIPE_SECTION>
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        <TITLE>LShi10030_ACTTGA-GTGACTC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271296" refcenter="RIKEN_CLST_DGT" accession="DRS271296">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452278</PRIMARY_ID>
                </IDENTIFIERS>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACTTGA-GTGACTC</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
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            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344997" center_name="RIKEN_CLST_DGT" accession="DRX344997">
        <TITLE>LShi10030_ACTTGA-GTGCATA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271314" refcenter="RIKEN_CLST_DGT" accession="DRS271314">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452296</PRIMARY_ID>
                </IDENTIFIERS>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACTTGA-GTGCATA</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
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        </DESIGN>
        <PLATFORM>
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                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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            </PIPELINE>
        </PROCESSING>
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    <EXPERIMENT alias="DRX344998" center_name="RIKEN_CLST_DGT" accession="DRX344998">
        <TITLE>LShi10030_ACTTGA-TACGTCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271358" refcenter="RIKEN_CLST_DGT" accession="DRS271358">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452340</PRIMARY_ID>
                </IDENTIFIERS>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACTTGA-TACGTCA</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX344999" center_name="RIKEN_CLST_DGT" accession="DRX344999">
        <TITLE>LShi10030_ACTTGA-TACTGAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271257" refcenter="RIKEN_CLST_DGT" accession="DRS271257">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452239</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACTTGA-TACTGAG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345000" center_name="RIKEN_CLST_DGT" accession="DRX345000">
        <TITLE>LShi10030_ACTTGA-TAGCGTA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271357" refcenter="RIKEN_CLST_DGT" accession="DRS271357">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452339</PRIMARY_ID>
                </IDENTIFIERS>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACTTGA-TAGCGTA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345001" center_name="RIKEN_CLST_DGT" accession="DRX345001">
        <TITLE>LShi10030_ACTTGA-TAGCTCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271225" refcenter="RIKEN_CLST_DGT" accession="DRS271225">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452207</PRIMARY_ID>
                </IDENTIFIERS>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACTTGA-TAGCTCA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
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        <TITLE>LShi10030_ACTTGA-TATGCAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
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        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271352" refcenter="RIKEN_CLST_DGT" accession="DRS271352">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452334</PRIMARY_ID>
                </IDENTIFIERS>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACTTGA-TATGCAC</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
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                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
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        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345003" center_name="RIKEN_CLST_DGT" accession="DRX345003">
        <TITLE>LShi10030_ACTTGA-TCACGTG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
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        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271255" refcenter="RIKEN_CLST_DGT" accession="DRS271255">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452237</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACTTGA-TCACGTG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
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                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
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                        <BASE_COORD>52</BASE_COORD>
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            </SPOT_DESCRIPTOR>
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        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
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                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
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            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345004" center_name="RIKEN_CLST_DGT" accession="DRX345004">
        <TITLE>LShi10030_ACTTGA-TCGATAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271188" refcenter="RIKEN_CLST_DGT" accession="DRS271188">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452170</PRIMARY_ID>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
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                    <READ_SPEC>
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                        <READ_CLASS>Application Read</READ_CLASS>
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                        <BASE_COORD>52</BASE_COORD>
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        <PLATFORM>
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        <PROCESSING>
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                <PIPE_SECTION>
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    <EXPERIMENT alias="DRX345005" center_name="RIKEN_CLST_DGT" accession="DRX345005">
        <TITLE>LShi10030_ACTTGA-TCGATCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271243" refcenter="RIKEN_CLST_DGT" accession="DRS271243">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452225</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACTTGA-TCGATCA</LIBRARY_NAME>
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                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
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                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
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            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345006" center_name="RIKEN_CLST_DGT" accession="DRX345006">
        <TITLE>LShi10030_ACTTGA-TCGTGAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271355" refcenter="RIKEN_CLST_DGT" accession="DRS271355">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452337</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACTTGA-TCGTGAC</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
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                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345007" center_name="RIKEN_CLST_DGT" accession="DRX345007">
        <TITLE>LShi10030_ACTTGA-TGACTCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271299" refcenter="RIKEN_CLST_DGT" accession="DRS271299">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452281</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACTTGA-TGACTCA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345008" center_name="RIKEN_CLST_DGT" accession="DRX345008">
        <TITLE>LShi10030_ACTTGA-TGATCAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271193" refcenter="RIKEN_CLST_DGT" accession="DRS271193">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452175</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACTTGA-TGATCAC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345009" center_name="RIKEN_CLST_DGT" accession="DRX345009">
        <TITLE>LShi10030_ACTTGA-TGCTACA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271353" refcenter="RIKEN_CLST_DGT" accession="DRS271353">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452335</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACTTGA-TGCTACA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
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        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345010" center_name="RIKEN_CLST_DGT" accession="DRX345010">
        <TITLE>LShi10030_ACTTGA-TGTCAGA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271222" refcenter="RIKEN_CLST_DGT" accession="DRS271222">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452204</PRIMARY_ID>
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            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_ACTTGA-TGTCAGA</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
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                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
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                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
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        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
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            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345011" center_name="RIKEN_CLST_DGT" accession="DRX345011">
        <TITLE>LShi10030_CAGATC-ACAGCTG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271281" refcenter="RIKEN_CLST_DGT" accession="DRS271281">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452263</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_CAGATC-ACAGCTG</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
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            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345012" center_name="RIKEN_CLST_DGT" accession="DRX345012">
        <TITLE>LShi10030_CAGATC-ACATGTC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
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        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271181" refcenter="RIKEN_CLST_DGT" accession="DRS271181">
                <IDENTIFIERS>
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                <LIBRARY_NAME>LShi10030_CAGATC-ACATGTC</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
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                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
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                    <READ_SPEC>
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                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
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        </PLATFORM>
        <PROCESSING>
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                <PIPE_SECTION>
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            </PIPELINE>
        </PROCESSING>
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        <TITLE>LShi10030_CAGATC-AGACGCT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
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        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271279" refcenter="RIKEN_CLST_DGT" accession="DRS271279">
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                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
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                <PIPE_SECTION>
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        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
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        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271289" refcenter="RIKEN_CLST_DGT" accession="DRS271289">
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                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
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                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
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                    <READ_SPEC>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
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        </DESIGN>
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        </PLATFORM>
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                <PIPE_SECTION>
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        </PROCESSING>
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        <TITLE>LShi10030_CAGATC-AGCTCGA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
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        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271277" refcenter="RIKEN_CLST_DGT" accession="DRS271277">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452259</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
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                <LIBRARY_LAYOUT>
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                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
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                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
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                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
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        </PLATFORM>
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                <PIPE_SECTION>
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        <TITLE>LShi10030_CAGATC-AGTACGC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
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        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271335" refcenter="RIKEN_CLST_DGT" accession="DRS271335">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452317</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_CAGATC-AGTACGC</LIBRARY_NAME>
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                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
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                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
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                        <BASE_COORD>52</BASE_COORD>
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        </DESIGN>
        <PLATFORM>
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                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
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        </PLATFORM>
        <PROCESSING>
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                <PIPE_SECTION>
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                    <VERSION></VERSION>
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            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
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        <TITLE>LShi10030_CAGATC-AGTGTCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271283" refcenter="RIKEN_CLST_DGT" accession="DRS271283">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452265</PRIMARY_ID>
                </IDENTIFIERS>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_CAGATC-AGTGTCA</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
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                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
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        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
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                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
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        <TITLE>LShi10030_CAGATC-ATACGTC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271284" refcenter="RIKEN_CLST_DGT" accession="DRS271284">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452266</PRIMARY_ID>
                </IDENTIFIERS>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_CAGATC-ATACGTC</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
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                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
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        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
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                <PIPE_SECTION>
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                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
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            </PIPELINE>
        </PROCESSING>
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        <TITLE>LShi10030_CAGATC-ATGCACT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
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        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271327" refcenter="RIKEN_CLST_DGT" accession="DRS271327">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452309</PRIMARY_ID>
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                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
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                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
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                    <READ_SPEC>
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                        <READ_INDEX>1</READ_INDEX>
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                        <READ_TYPE>Reverse</READ_TYPE>
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        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
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                <PIPE_SECTION>
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                    <VERSION></VERSION>
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        </PROCESSING>
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        <TITLE>LShi10030_CAGATC-CACGTGT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
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                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
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        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271272" refcenter="RIKEN_CLST_DGT" accession="DRS271272">
                <IDENTIFIERS>
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                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
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                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
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                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
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            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
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                <PIPE_SECTION>
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        <TITLE>LShi10030_CAGATC-CACTATG.experiment</TITLE>
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                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
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        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271286" refcenter="RIKEN_CLST_DGT" accession="DRS271286">
                <IDENTIFIERS>
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                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345022" center_name="RIKEN_CLST_DGT" accession="DRX345022">
        <TITLE>LShi10030_CAGATC-CAGATCT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271330" refcenter="RIKEN_CLST_DGT" accession="DRS271330">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452312</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_CAGATC-CAGATCT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345023" center_name="RIKEN_CLST_DGT" accession="DRX345023">
        <TITLE>LShi10030_CAGATC-CAGCAGT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271280" refcenter="RIKEN_CLST_DGT" accession="DRS271280">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452262</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_CAGATC-CAGCAGT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345024" center_name="RIKEN_CLST_DGT" accession="DRX345024">
        <TITLE>LShi10030_CAGATC-CAGTCTG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271247" refcenter="RIKEN_CLST_DGT" accession="DRS271247">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452229</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_CAGATC-CAGTCTG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345025" center_name="RIKEN_CLST_DGT" accession="DRX345025">
        <TITLE>LShi10030_CAGATC-CAGTGTC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271333" refcenter="RIKEN_CLST_DGT" accession="DRS271333">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452315</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_CAGATC-CAGTGTC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345026" center_name="RIKEN_CLST_DGT" accession="DRX345026">
        <TITLE>LShi10030_CAGATC-CGACGAT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271360" refcenter="RIKEN_CLST_DGT" accession="DRS271360">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452342</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_CAGATC-CGACGAT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345027" center_name="RIKEN_CLST_DGT" accession="DRX345027">
        <TITLE>LShi10030_CAGATC-CGACGTA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271288" refcenter="RIKEN_CLST_DGT" accession="DRS271288">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452270</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_CAGATC-CGACGTA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345028" center_name="RIKEN_CLST_DGT" accession="DRX345028">
        <TITLE>LShi10030_CAGATC-CGATCTG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271365" refcenter="RIKEN_CLST_DGT" accession="DRS271365">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452347</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_CAGATC-CGATCTG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345029" center_name="RIKEN_CLST_DGT" accession="DRX345029">
        <TITLE>LShi10030_CAGATC-CGTACTG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271362" refcenter="RIKEN_CLST_DGT" accession="DRS271362">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452344</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_CAGATC-CGTACTG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345030" center_name="RIKEN_CLST_DGT" accession="DRX345030">
        <TITLE>LShi10030_CAGATC-CTAGTAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271273" refcenter="RIKEN_CLST_DGT" accession="DRS271273">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452255</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_CAGATC-CTAGTAC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
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                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
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                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345031" center_name="RIKEN_CLST_DGT" accession="DRX345031">
        <TITLE>LShi10030_CAGATC-CTAGTCG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271275" refcenter="RIKEN_CLST_DGT" accession="DRS271275">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452257</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_CAGATC-CTAGTCG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
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                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
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            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345032" center_name="RIKEN_CLST_DGT" accession="DRX345032">
        <TITLE>LShi10030_CAGATC-CTGATGC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271185" refcenter="RIKEN_CLST_DGT" accession="DRS271185">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452167</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_CAGATC-CTGATGC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345033" center_name="RIKEN_CLST_DGT" accession="DRX345033">
        <TITLE>LShi10030_CAGATC-GACACTG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271276" refcenter="RIKEN_CLST_DGT" accession="DRS271276">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452258</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_CAGATC-GACACTG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345034" center_name="RIKEN_CLST_DGT" accession="DRX345034">
        <TITLE>LShi10030_CAGATC-GACATCG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271328" refcenter="RIKEN_CLST_DGT" accession="DRS271328">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452310</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_CAGATC-GACATCG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345035" center_name="RIKEN_CLST_DGT" accession="DRX345035">
        <TITLE>LShi10030_CAGATC-GACTAGC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271336" refcenter="RIKEN_CLST_DGT" accession="DRS271336">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452318</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_CAGATC-GACTAGC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345036" center_name="RIKEN_CLST_DGT" accession="DRX345036">
        <TITLE>LShi10030_CAGATC-GACTGCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271278" refcenter="RIKEN_CLST_DGT" accession="DRS271278">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452260</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_CAGATC-GACTGCA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345037" center_name="RIKEN_CLST_DGT" accession="DRX345037">
        <TITLE>LShi10030_CAGATC-GAGCTCT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271331" refcenter="RIKEN_CLST_DGT" accession="DRS271331">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452313</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_CAGATC-GAGCTCT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345038" center_name="RIKEN_CLST_DGT" accession="DRX345038">
        <TITLE>LShi10030_CAGATC-GATATGC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271290" refcenter="RIKEN_CLST_DGT" accession="DRS271290">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452272</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_CAGATC-GATATGC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345039" center_name="RIKEN_CLST_DGT" accession="DRX345039">
        <TITLE>LShi10030_CAGATC-GATCGTA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271274" refcenter="RIKEN_CLST_DGT" accession="DRS271274">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452256</PRIMARY_ID>
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            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_CAGATC-GATCGTA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
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                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
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                        <BASE_COORD>52</BASE_COORD>
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            </SPOT_DESCRIPTOR>
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        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
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                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345040" center_name="RIKEN_CLST_DGT" accession="DRX345040">
        <TITLE>LShi10030_CAGATC-GCAGACT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271182" refcenter="RIKEN_CLST_DGT" accession="DRS271182">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452164</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
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                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
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                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
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                        <BASE_COORD>52</BASE_COORD>
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            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
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        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
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    <EXPERIMENT alias="DRX345041" center_name="RIKEN_CLST_DGT" accession="DRX345041">
        <TITLE>LShi10030_CAGATC-GCATATG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271186" refcenter="RIKEN_CLST_DGT" accession="DRS271186">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452168</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_CAGATC-GCATATG</LIBRARY_NAME>
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                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
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                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345042" center_name="RIKEN_CLST_DGT" accession="DRX345042">
        <TITLE>LShi10030_CAGATC-GCTACGA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271334" refcenter="RIKEN_CLST_DGT" accession="DRS271334">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452316</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_CAGATC-GCTACGA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345043" center_name="RIKEN_CLST_DGT" accession="DRX345043">
        <TITLE>LShi10030_CAGATC-GCTATAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271180" refcenter="RIKEN_CLST_DGT" accession="DRS271180">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452162</PRIMARY_ID>
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            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_CAGATC-GCTATAG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345044" center_name="RIKEN_CLST_DGT" accession="DRX345044">
        <TITLE>LShi10030_CAGATC-GCTCATG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271184" refcenter="RIKEN_CLST_DGT" accession="DRS271184">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452166</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_CAGATC-GCTCATG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345045" center_name="RIKEN_CLST_DGT" accession="DRX345045">
        <TITLE>LShi10030_CAGATC-GTCACAT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271187" refcenter="RIKEN_CLST_DGT" accession="DRS271187">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452169</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_CAGATC-GTCACAT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345046" center_name="RIKEN_CLST_DGT" accession="DRX345046">
        <TITLE>LShi10030_CAGATC-TACGCGT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271287" refcenter="RIKEN_CLST_DGT" accession="DRS271287">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452269</PRIMARY_ID>
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            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_CAGATC-TACGCGT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
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            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345047" center_name="RIKEN_CLST_DGT" accession="DRX345047">
        <TITLE>LShi10030_CAGATC-TACGCTA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271337" refcenter="RIKEN_CLST_DGT" accession="DRS271337">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452319</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_CAGATC-TACGCTA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345048" center_name="RIKEN_CLST_DGT" accession="DRX345048">
        <TITLE>LShi10030_CAGATC-TACGTAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271363" refcenter="RIKEN_CLST_DGT" accession="DRS271363">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452345</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_CAGATC-TACGTAG</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
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                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
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                        <BASE_COORD>52</BASE_COORD>
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                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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                    <PROGRAM></PROGRAM>
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            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345049" center_name="RIKEN_CLST_DGT" accession="DRX345049">
        <TITLE>LShi10030_CAGATC-TAGCATC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271291" refcenter="RIKEN_CLST_DGT" accession="DRS271291">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452273</PRIMARY_ID>
                </IDENTIFIERS>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_CAGATC-TAGCATC</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
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                        <READ_TYPE>Forward</READ_TYPE>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
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                        <BASE_COORD>52</BASE_COORD>
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                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
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        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
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        </PROCESSING>
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    <EXPERIMENT alias="DRX345050" center_name="RIKEN_CLST_DGT" accession="DRX345050">
        <TITLE>LShi10030_CAGATC-TAGCGAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271183" refcenter="RIKEN_CLST_DGT" accession="DRS271183">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452165</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_CAGATC-TAGCGAC</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
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            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345051" center_name="RIKEN_CLST_DGT" accession="DRX345051">
        <TITLE>LShi10030_CAGATC-TAGTCAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271361" refcenter="RIKEN_CLST_DGT" accession="DRS271361">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452343</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_CAGATC-TAGTCAC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345052" center_name="RIKEN_CLST_DGT" accession="DRX345052">
        <TITLE>LShi10030_CAGATC-TCACAGT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271285" refcenter="RIKEN_CLST_DGT" accession="DRS271285">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452267</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_CAGATC-TCACAGT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345053" center_name="RIKEN_CLST_DGT" accession="DRX345053">
        <TITLE>LShi10030_CAGATC-TCGCTGA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271364" refcenter="RIKEN_CLST_DGT" accession="DRS271364">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452346</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_CAGATC-TCGCTGA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345054" center_name="RIKEN_CLST_DGT" accession="DRX345054">
        <TITLE>LShi10030_CAGATC-TCTCGAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271332" refcenter="RIKEN_CLST_DGT" accession="DRS271332">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452314</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_CAGATC-TCTCGAG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345055" center_name="RIKEN_CLST_DGT" accession="DRX345055">
        <TITLE>LShi10030_CAGATC-TGACTGC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271248" refcenter="RIKEN_CLST_DGT" accession="DRS271248">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452230</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_CAGATC-TGACTGC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345056" center_name="RIKEN_CLST_DGT" accession="DRX345056">
        <TITLE>LShi10030_CAGATC-TGTCACG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271326" refcenter="RIKEN_CLST_DGT" accession="DRS271326">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452308</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_CAGATC-TGTCACG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345057" center_name="RIKEN_CLST_DGT" accession="DRX345057">
        <TITLE>LShi10030_CAGATC-TGTCGAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271282" refcenter="RIKEN_CLST_DGT" accession="DRS271282">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452264</PRIMARY_ID>
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            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_CAGATC-TGTCGAC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345058" center_name="RIKEN_CLST_DGT" accession="DRX345058">
        <TITLE>LShi10030_CAGATC-TGTCGCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271329" refcenter="RIKEN_CLST_DGT" accession="DRS271329">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452311</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_CAGATC-TGTCGCA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345059" center_name="RIKEN_CLST_DGT" accession="DRX345059">
        <TITLE>LShi10030_GCCAAT-ACGATCG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271229" refcenter="RIKEN_CLST_DGT" accession="DRS271229">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452211</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_GCCAAT-ACGATCG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345060" center_name="RIKEN_CLST_DGT" accession="DRX345060">
        <TITLE>LShi10030_GCCAAT-ACGTCGA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271302" refcenter="RIKEN_CLST_DGT" accession="DRS271302">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452284</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_GCCAAT-ACGTCGA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345061" center_name="RIKEN_CLST_DGT" accession="DRX345061">
        <TITLE>LShi10030_GCCAAT-ACTATGC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271217" refcenter="RIKEN_CLST_DGT" accession="DRS271217">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452199</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_GCCAAT-ACTATGC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345062" center_name="RIKEN_CLST_DGT" accession="DRX345062">
        <TITLE>LShi10030_GCCAAT-ACTGCAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271216" refcenter="RIKEN_CLST_DGT" accession="DRS271216">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452198</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_GCCAAT-ACTGCAG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345063" center_name="RIKEN_CLST_DGT" accession="DRX345063">
        <TITLE>LShi10030_GCCAAT-AGCATCG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271301" refcenter="RIKEN_CLST_DGT" accession="DRS271301">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452283</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_GCCAAT-AGCATCG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345064" center_name="RIKEN_CLST_DGT" accession="DRX345064">
        <TITLE>LShi10030_GCCAAT-AGCTCAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271218" refcenter="RIKEN_CLST_DGT" accession="DRS271218">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452200</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_GCCAAT-AGCTCAG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345065" center_name="RIKEN_CLST_DGT" accession="DRX345065">
        <TITLE>LShi10030_GCCAAT-AGTCAGT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271305" refcenter="RIKEN_CLST_DGT" accession="DRS271305">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452287</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_GCCAAT-AGTCAGT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345066" center_name="RIKEN_CLST_DGT" accession="DRX345066">
        <TITLE>LShi10030_GCCAAT-ATCAGCG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271178" refcenter="RIKEN_CLST_DGT" accession="DRS271178">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452160</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_GCCAAT-ATCAGCG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345067" center_name="RIKEN_CLST_DGT" accession="DRX345067">
        <TITLE>LShi10030_GCCAAT-ATGCGCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271179" refcenter="RIKEN_CLST_DGT" accession="DRS271179">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452161</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_GCCAAT-ATGCGCA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
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            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345068" center_name="RIKEN_CLST_DGT" accession="DRX345068">
        <TITLE>LShi10030_GCCAAT-ATGTCAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271235" refcenter="RIKEN_CLST_DGT" accession="DRS271235">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452217</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_GCCAAT-ATGTCAG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345069" center_name="RIKEN_CLST_DGT" accession="DRX345069">
        <TITLE>LShi10030_GCCAAT-CACTAGT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271338" refcenter="RIKEN_CLST_DGT" accession="DRS271338">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452320</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_GCCAAT-CACTAGT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345070" center_name="RIKEN_CLST_DGT" accession="DRX345070">
        <TITLE>LShi10030_GCCAAT-CATAGCT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271304" refcenter="RIKEN_CLST_DGT" accession="DRS271304">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452286</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_GCCAAT-CATAGCT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345071" center_name="RIKEN_CLST_DGT" accession="DRX345071">
        <TITLE>LShi10030_GCCAAT-CATATCG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271239" refcenter="RIKEN_CLST_DGT" accession="DRS271239">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452221</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_GCCAAT-CATATCG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345072" center_name="RIKEN_CLST_DGT" accession="DRX345072">
        <TITLE>LShi10030_GCCAAT-CGACTGT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271213" refcenter="RIKEN_CLST_DGT" accession="DRS271213">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452195</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_GCCAAT-CGACTGT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345073" center_name="RIKEN_CLST_DGT" accession="DRX345073">
        <TITLE>LShi10030_GCCAAT-CGATGCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271339" refcenter="RIKEN_CLST_DGT" accession="DRS271339">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452321</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_GCCAAT-CGATGCA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345074" center_name="RIKEN_CLST_DGT" accession="DRX345074">
        <TITLE>LShi10030_GCCAAT-CGTACAT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271233" refcenter="RIKEN_CLST_DGT" accession="DRS271233">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452215</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_GCCAAT-CGTACAT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345075" center_name="RIKEN_CLST_DGT" accession="DRX345075">
        <TITLE>LShi10030_GCCAAT-CGTCATA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271214" refcenter="RIKEN_CLST_DGT" accession="DRS271214">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452196</PRIMARY_ID>
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            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_GCCAAT-CGTCATA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
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                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
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                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345076" center_name="RIKEN_CLST_DGT" accession="DRX345076">
        <TITLE>LShi10030_GCCAAT-CTAGCTG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271300" refcenter="RIKEN_CLST_DGT" accession="DRS271300">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452282</PRIMARY_ID>
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            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_GCCAAT-CTAGCTG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
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                        <READ_INDEX>0</READ_INDEX>
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                    <READ_SPEC>
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                        <READ_CLASS>Application Read</READ_CLASS>
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                        <BASE_COORD>52</BASE_COORD>
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                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
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        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
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            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345077" center_name="RIKEN_CLST_DGT" accession="DRX345077">
        <TITLE>LShi10030_GCCAAT-CTATGCG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271268" refcenter="RIKEN_CLST_DGT" accession="DRS271268">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452250</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_GCCAAT-CTATGCG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345078" center_name="RIKEN_CLST_DGT" accession="DRX345078">
        <TITLE>LShi10030_GCCAAT-CTCAGAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271241" refcenter="RIKEN_CLST_DGT" accession="DRS271241">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452223</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_GCCAAT-CTCAGAG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345079" center_name="RIKEN_CLST_DGT" accession="DRX345079">
        <TITLE>LShi10030_GCCAAT-CTCGATA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271210" refcenter="RIKEN_CLST_DGT" accession="DRS271210">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452192</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_GCCAAT-CTCGATA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345080" center_name="RIKEN_CLST_DGT" accession="DRX345080">
        <TITLE>LShi10030_GCCAAT-CTGATAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271227" refcenter="RIKEN_CLST_DGT" accession="DRS271227">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452209</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_GCCAAT-CTGATAG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345081" center_name="RIKEN_CLST_DGT" accession="DRX345081">
        <TITLE>LShi10030_GCCAAT-GACTACT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271211" refcenter="RIKEN_CLST_DGT" accession="DRS271211">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452193</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_GCCAAT-GACTACT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345082" center_name="RIKEN_CLST_DGT" accession="DRX345082">
        <TITLE>LShi10030_GCCAAT-GATCACG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271271" refcenter="RIKEN_CLST_DGT" accession="DRS271271">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452253</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_GCCAAT-GATCACG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345083" center_name="RIKEN_CLST_DGT" accession="DRX345083">
        <TITLE>LShi10030_GCCAAT-GATCGCT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271215" refcenter="RIKEN_CLST_DGT" accession="DRS271215">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452197</PRIMARY_ID>
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            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_GCCAAT-GATCGCT</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
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            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
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                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
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                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
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            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345084" center_name="RIKEN_CLST_DGT" accession="DRX345084">
        <TITLE>LShi10030_GCCAAT-GATCTCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
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        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271270" refcenter="RIKEN_CLST_DGT" accession="DRS271270">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452252</PRIMARY_ID>
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            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_GCCAAT-GATCTCA</LIBRARY_NAME>
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                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
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                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345085" center_name="RIKEN_CLST_DGT" accession="DRX345085">
        <TITLE>LShi10030_GCCAAT-GATGCAT.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271212" refcenter="RIKEN_CLST_DGT" accession="DRS271212">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452194</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_GCCAAT-GATGCAT</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345086" center_name="RIKEN_CLST_DGT" accession="DRX345086">
        <TITLE>LShi10030_GCCAAT-GCGTATA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271240" refcenter="RIKEN_CLST_DGT" accession="DRS271240">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452222</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_GCCAAT-GCGTATA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345087" center_name="RIKEN_CLST_DGT" accession="DRX345087">
        <TITLE>LShi10030_GCCAAT-GCTAGCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271195" refcenter="RIKEN_CLST_DGT" accession="DRS271195">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452177</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_GCCAAT-GCTAGCA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345088" center_name="RIKEN_CLST_DGT" accession="DRX345088">
        <TITLE>LShi10030_GCCAAT-GCTGTAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271236" refcenter="RIKEN_CLST_DGT" accession="DRS271236">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452218</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_GCCAAT-GCTGTAC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345089" center_name="RIKEN_CLST_DGT" accession="DRX345089">
        <TITLE>LShi10030_GCCAAT-GTACATG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271220" refcenter="RIKEN_CLST_DGT" accession="DRS271220">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452202</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_GCCAAT-GTACATG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345090" center_name="RIKEN_CLST_DGT" accession="DRX345090">
        <TITLE>LShi10030_GCCAAT-GTAGCAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271230" refcenter="RIKEN_CLST_DGT" accession="DRS271230">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452212</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_GCCAAT-GTAGCAC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345091" center_name="RIKEN_CLST_DGT" accession="DRX345091">
        <TITLE>LShi10030_GCCAAT-GTATAGC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271231" refcenter="RIKEN_CLST_DGT" accession="DRS271231">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452213</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_GCCAAT-GTATAGC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345092" center_name="RIKEN_CLST_DGT" accession="DRX345092">
        <TITLE>LShi10030_GCCAAT-GTGACTC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271234" refcenter="RIKEN_CLST_DGT" accession="DRS271234">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452216</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_GCCAAT-GTGACTC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345093" center_name="RIKEN_CLST_DGT" accession="DRX345093">
        <TITLE>LShi10030_GCCAAT-GTGCATA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271269" refcenter="RIKEN_CLST_DGT" accession="DRS271269">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452251</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_GCCAAT-GTGCATA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345094" center_name="RIKEN_CLST_DGT" accession="DRX345094">
        <TITLE>LShi10030_GCCAAT-TACGTCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271209" refcenter="RIKEN_CLST_DGT" accession="DRS271209">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452191</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_GCCAAT-TACGTCA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345095" center_name="RIKEN_CLST_DGT" accession="DRX345095">
        <TITLE>LShi10030_GCCAAT-TACTGAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271303" refcenter="RIKEN_CLST_DGT" accession="DRS271303">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452285</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_GCCAAT-TACTGAG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345096" center_name="RIKEN_CLST_DGT" accession="DRX345096">
        <TITLE>LShi10030_GCCAAT-TAGCGTA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271197" refcenter="RIKEN_CLST_DGT" accession="DRS271197">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452179</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_GCCAAT-TAGCGTA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345097" center_name="RIKEN_CLST_DGT" accession="DRX345097">
        <TITLE>LShi10030_GCCAAT-TAGCTCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271219" refcenter="RIKEN_CLST_DGT" accession="DRS271219">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452201</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_GCCAAT-TAGCTCA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345098" center_name="RIKEN_CLST_DGT" accession="DRX345098">
        <TITLE>LShi10030_GCCAAT-TATGCAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271194" refcenter="RIKEN_CLST_DGT" accession="DRS271194">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452176</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_GCCAAT-TATGCAC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345099" center_name="RIKEN_CLST_DGT" accession="DRX345099">
        <TITLE>LShi10030_GCCAAT-TCACGTG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271237" refcenter="RIKEN_CLST_DGT" accession="DRS271237">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452219</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_GCCAAT-TCACGTG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345100" center_name="RIKEN_CLST_DGT" accession="DRX345100">
        <TITLE>LShi10030_GCCAAT-TCGATAG.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271341" refcenter="RIKEN_CLST_DGT" accession="DRS271341">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452323</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_GCCAAT-TCGATAG</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345101" center_name="RIKEN_CLST_DGT" accession="DRX345101">
        <TITLE>LShi10030_GCCAAT-TCGATCA.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271340" refcenter="RIKEN_CLST_DGT" accession="DRS271340">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452322</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_GCCAAT-TCGATCA</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
            </LIBRARY_DESCRIPTOR>
            <SPOT_DESCRIPTOR>
                <SPOT_DECODE_SPEC>
                    <SPOT_LENGTH>102</SPOT_LENGTH>
                    <READ_SPEC>
                        <READ_INDEX>0</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Forward</READ_TYPE>
                        <BASE_COORD>1</BASE_COORD>
                    </READ_SPEC>
                    <READ_SPEC>
                        <READ_INDEX>1</READ_INDEX>
                        <READ_CLASS>Application Read</READ_CLASS>
                        <READ_TYPE>Reverse</READ_TYPE>
                        <BASE_COORD>52</BASE_COORD>
                    </READ_SPEC>
                </SPOT_DECODE_SPEC>
            </SPOT_DESCRIPTOR>
        </DESIGN>
        <PLATFORM>
            <ILLUMINA>
                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
            </ILLUMINA>
        </PLATFORM>
        <PROCESSING>
            <PIPELINE>
                <PIPE_SECTION>
                    <STEP_INDEX>1</STEP_INDEX>
                    <PREV_STEP_INDEX>NIL</PREV_STEP_INDEX>
                    <PROGRAM></PROGRAM>
                    <VERSION></VERSION>
                </PIPE_SECTION>
            </PIPELINE>
        </PROCESSING>
    </EXPERIMENT>
    <EXPERIMENT alias="DRX345102" center_name="RIKEN_CLST_DGT" accession="DRX345102">
        <TITLE>LShi10030_GCCAAT-TCGTGAC.experiment</TITLE>
        <STUDY_REF refname="DRP005280" refcenter="RIKEN_CLST_DGT" accession="DRP005280">
            <IDENTIFIERS>
                <PRIMARY_ID label="BioProject ID">PRJDB7993</PRIMARY_ID>
            </IDENTIFIERS>
        </STUDY_REF>
        <DESIGN>
            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271242" refcenter="RIKEN_CLST_DGT" accession="DRS271242">
                <IDENTIFIERS>
                    <PRIMARY_ID label="BioSample ID">SAMD00452224</PRIMARY_ID>
                </IDENTIFIERS>
            </SAMPLE_DESCRIPTOR>
            <LIBRARY_DESCRIPTOR>
                <LIBRARY_NAME>LShi10030_GCCAAT-TCGTGAC</LIBRARY_NAME>
                <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
                <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
                <LIBRARY_SELECTION>CAGE</LIBRARY_SELECTION>
                <LIBRARY_LAYOUT>
                    <SINGLE/>
                </LIBRARY_LAYOUT>
                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
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                <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
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            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
            <SAMPLE_DESCRIPTOR refname="DRS271232" refcenter="RIKEN_CLST_DGT" accession="DRS271232">
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                <LIBRARY_CONSTRUCTION_PROTOCOL>THe CAGE sequencing library is constructed using the LQ-ssCAGE protocol explained in Takahashi et al. 2021, https://doi.org/10.1007/978-1-0716-1597-3_4 .</LIBRARY_CONSTRUCTION_PROTOCOL>
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            <DESIGN_DESCRIPTION>The purpose of this experiment is analyzing functions of lncRNAs in the FANTOM6 project.</DESIGN_DESCRIPTION>
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