<?xml version="1.0" encoding="UTF-8"?>
<EXPERIMENT_SET xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
  <EXPERIMENT alias="SC_EXP_5299_1" center_name="SC" accession="ERX009816">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX009816</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_5299_1</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE/>
    <STUDY_REF accession="ERP000165" refname="Klebsiella pneumoniae global diversity-sc-2010-04-07" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP000165</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">Klebsiella pneumoniae global diversity-sc-2010-04-07</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of barcoded sample library "478p20" for the "Klebsiella pneumoniae diversity" study.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS024887">
        <POOL>
          <DEFAULT_MEMBER>
            <IDENTIFIERS>
              <PRIMARY_ID>SRS024887</PRIMARY_ID>
            </IDENTIFIERS>
          </DEFAULT_MEMBER>
          <MEMBER accession="ERS011962" member_name="5299_1#1">
            <IDENTIFIERS>
              <PRIMARY_ID>ERS011962</PRIMARY_ID>
            </IDENTIFIERS>
            <READ_LABEL read_group_tag="1">barcode_tag</READ_LABEL>
          </MEMBER>
          <MEMBER accession="ERS011963" member_name="5299_1#2">
            <IDENTIFIERS>
              <PRIMARY_ID>ERS011963</PRIMARY_ID>
            </IDENTIFIERS>
            <READ_LABEL read_group_tag="2">barcode_tag</READ_LABEL>
          </MEMBER>
          <MEMBER accession="ERS011964" member_name="5299_1#3">
            <IDENTIFIERS>
              <PRIMARY_ID>ERS011964</PRIMARY_ID>
            </IDENTIFIERS>
            <READ_LABEL read_group_tag="3">barcode_tag</READ_LABEL>
          </MEMBER>
          <MEMBER accession="ERS011965" member_name="5299_1#4">
            <IDENTIFIERS>
              <PRIMARY_ID>ERS011965</PRIMARY_ID>
            </IDENTIFIERS>
            <READ_LABEL read_group_tag="4">barcode_tag</READ_LABEL>
          </MEMBER>
          <MEMBER accession="ERS011966" member_name="5299_1#5">
            <IDENTIFIERS>
              <PRIMARY_ID>ERS011966</PRIMARY_ID>
            </IDENTIFIERS>
            <READ_LABEL read_group_tag="5">barcode_tag</READ_LABEL>
          </MEMBER>
          <MEMBER accession="ERS011967" member_name="5299_1#6">
            <IDENTIFIERS>
              <PRIMARY_ID>ERS011967</PRIMARY_ID>
            </IDENTIFIERS>
            <READ_LABEL read_group_tag="6">barcode_tag</READ_LABEL>
          </MEMBER>
          <MEMBER accession="ERS011968" member_name="5299_1#7">
            <IDENTIFIERS>
              <PRIMARY_ID>ERS011968</PRIMARY_ID>
            </IDENTIFIERS>
            <READ_LABEL read_group_tag="7">barcode_tag</READ_LABEL>
          </MEMBER>
          <MEMBER accession="ERS011969" member_name="5299_1#8">
            <IDENTIFIERS>
              <PRIMARY_ID>ERS011969</PRIMARY_ID>
            </IDENTIFIERS>
            <READ_LABEL read_group_tag="8">barcode_tag</READ_LABEL>
          </MEMBER>
          <MEMBER accession="ERS011970" member_name="5299_1#9">
            <IDENTIFIERS>
              <PRIMARY_ID>ERS011970</PRIMARY_ID>
            </IDENTIFIERS>
            <READ_LABEL read_group_tag="9">barcode_tag</READ_LABEL>
          </MEMBER>
          <MEMBER accession="ERS011971" member_name="5299_1#10">
            <IDENTIFIERS>
              <PRIMARY_ID>ERS011971</PRIMARY_ID>
            </IDENTIFIERS>
            <READ_LABEL read_group_tag="10">barcode_tag</READ_LABEL>
          </MEMBER>
          <MEMBER accession="ERS011972" member_name="5299_1#11">
            <IDENTIFIERS>
              <PRIMARY_ID>ERS011972</PRIMARY_ID>
            </IDENTIFIERS>
            <READ_LABEL read_group_tag="11">barcode_tag</READ_LABEL>
          </MEMBER>
          <MEMBER accession="ERS011973" member_name="5299_1#12">
            <IDENTIFIERS>
              <PRIMARY_ID>ERS011973</PRIMARY_ID>
            </IDENTIFIERS>
            <READ_LABEL read_group_tag="12">barcode_tag</READ_LABEL>
          </MEMBER>
        </POOL>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>478p20</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="312" NOMINAL_SDEV="13"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_LABEL>barcode_tag</READ_LABEL>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>BarCode</READ_TYPE>
            <EXPECTED_BASECALL_TABLE>
              <BASECALL read_group_tag="1" min_match="7" max_mismatch="1" match_edge="end">ATCACGTT</BASECALL>
              <BASECALL read_group_tag="2" min_match="7" max_mismatch="1" match_edge="end">CGATGTTT</BASECALL>
              <BASECALL read_group_tag="3" min_match="7" max_mismatch="1" match_edge="end">TTAGGCAT</BASECALL>
              <BASECALL read_group_tag="4" min_match="7" max_mismatch="1" match_edge="end">TGACCACT</BASECALL>
              <BASECALL read_group_tag="5" min_match="7" max_mismatch="1" match_edge="end">ACAGTGGT</BASECALL>
              <BASECALL read_group_tag="6" min_match="7" max_mismatch="1" match_edge="end">GCCAATGT</BASECALL>
              <BASECALL read_group_tag="7" min_match="7" max_mismatch="1" match_edge="end">CAGATCTG</BASECALL>
              <BASECALL read_group_tag="8" min_match="7" max_mismatch="1" match_edge="end">ACTTGATG</BASECALL>
              <BASECALL read_group_tag="9" min_match="7" max_mismatch="1" match_edge="end">GATCAGCG</BASECALL>
              <BASECALL read_group_tag="10" min_match="7" max_mismatch="1" match_edge="end">TAGCTTGT</BASECALL>
              <BASECALL read_group_tag="11" min_match="7" max_mismatch="1" match_edge="end">GGCTACAG</BASECALL>
              <BASECALL read_group_tag="12" min_match="7" max_mismatch="1" match_edge="end">CTTGTACT</BASECALL>
            </EXPECTED_BASECALL_TABLE>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>2</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Reverse</READ_TYPE>
            <BASE_COORD>85</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina Genome Analyzer II</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
  <EXPERIMENT alias="SC_EXP_5299_7" center_name="SC" accession="ERX009817">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX009817</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_5299_7</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE/>
    <STUDY_REF accession="ERP000165" refname="Klebsiella pneumoniae global diversity-sc-2010-04-07" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP000165</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">Klebsiella pneumoniae global diversity-sc-2010-04-07</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of barcoded sample library "478p27" for the "Klebsiella pneumoniae diversity" study.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS024887">
        <POOL>
          <DEFAULT_MEMBER>
            <IDENTIFIERS>
              <PRIMARY_ID>SRS024887</PRIMARY_ID>
            </IDENTIFIERS>
          </DEFAULT_MEMBER>
          <MEMBER accession="ERS012046" member_name="5299_7#1">
            <IDENTIFIERS>
              <PRIMARY_ID>ERS012046</PRIMARY_ID>
            </IDENTIFIERS>
            <READ_LABEL read_group_tag="1">barcode_tag</READ_LABEL>
          </MEMBER>
          <MEMBER accession="ERS012047" member_name="5299_7#2">
            <IDENTIFIERS>
              <PRIMARY_ID>ERS012047</PRIMARY_ID>
            </IDENTIFIERS>
            <READ_LABEL read_group_tag="2">barcode_tag</READ_LABEL>
          </MEMBER>
          <MEMBER accession="ERS012048" member_name="5299_7#3">
            <IDENTIFIERS>
              <PRIMARY_ID>ERS012048</PRIMARY_ID>
            </IDENTIFIERS>
            <READ_LABEL read_group_tag="3">barcode_tag</READ_LABEL>
          </MEMBER>
          <MEMBER accession="ERS012049" member_name="5299_7#4">
            <IDENTIFIERS>
              <PRIMARY_ID>ERS012049</PRIMARY_ID>
            </IDENTIFIERS>
            <READ_LABEL read_group_tag="4">barcode_tag</READ_LABEL>
          </MEMBER>
          <MEMBER accession="ERS012050" member_name="5299_7#5">
            <IDENTIFIERS>
              <PRIMARY_ID>ERS012050</PRIMARY_ID>
            </IDENTIFIERS>
            <READ_LABEL read_group_tag="5">barcode_tag</READ_LABEL>
          </MEMBER>
          <MEMBER accession="ERS012051" member_name="5299_7#6">
            <IDENTIFIERS>
              <PRIMARY_ID>ERS012051</PRIMARY_ID>
            </IDENTIFIERS>
            <READ_LABEL read_group_tag="6">barcode_tag</READ_LABEL>
          </MEMBER>
          <MEMBER accession="ERS012052" member_name="5299_7#7">
            <IDENTIFIERS>
              <PRIMARY_ID>ERS012052</PRIMARY_ID>
            </IDENTIFIERS>
            <READ_LABEL read_group_tag="7">barcode_tag</READ_LABEL>
          </MEMBER>
          <MEMBER accession="ERS012053" member_name="5299_7#8">
            <IDENTIFIERS>
              <PRIMARY_ID>ERS012053</PRIMARY_ID>
            </IDENTIFIERS>
            <READ_LABEL read_group_tag="8">barcode_tag</READ_LABEL>
          </MEMBER>
          <MEMBER accession="ERS012054" member_name="5299_7#9">
            <IDENTIFIERS>
              <PRIMARY_ID>ERS012054</PRIMARY_ID>
            </IDENTIFIERS>
            <READ_LABEL read_group_tag="9">barcode_tag</READ_LABEL>
          </MEMBER>
          <MEMBER accession="ERS012055" member_name="5299_7#10">
            <IDENTIFIERS>
              <PRIMARY_ID>ERS012055</PRIMARY_ID>
            </IDENTIFIERS>
            <READ_LABEL read_group_tag="10">barcode_tag</READ_LABEL>
          </MEMBER>
        </POOL>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>478p27</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="302" NOMINAL_SDEV="77"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_LABEL>barcode_tag</READ_LABEL>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>BarCode</READ_TYPE>
            <EXPECTED_BASECALL_TABLE>
              <BASECALL read_group_tag="1" min_match="7" max_mismatch="1" match_edge="end">ATCACGTT</BASECALL>
              <BASECALL read_group_tag="2" min_match="7" max_mismatch="1" match_edge="end">CGATGTTT</BASECALL>
              <BASECALL read_group_tag="3" min_match="7" max_mismatch="1" match_edge="end">TTAGGCAT</BASECALL>
              <BASECALL read_group_tag="4" min_match="7" max_mismatch="1" match_edge="end">TGACCACT</BASECALL>
              <BASECALL read_group_tag="5" min_match="7" max_mismatch="1" match_edge="end">ACAGTGGT</BASECALL>
              <BASECALL read_group_tag="6" min_match="7" max_mismatch="1" match_edge="end">GCCAATGT</BASECALL>
              <BASECALL read_group_tag="7" min_match="7" max_mismatch="1" match_edge="end">CAGATCTG</BASECALL>
              <BASECALL read_group_tag="8" min_match="7" max_mismatch="1" match_edge="end">ACTTGATG</BASECALL>
              <BASECALL read_group_tag="9" min_match="7" max_mismatch="1" match_edge="end">GATCAGCG</BASECALL>
              <BASECALL read_group_tag="10" min_match="7" max_mismatch="1" match_edge="end">TAGCTTGT</BASECALL>
            </EXPECTED_BASECALL_TABLE>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>2</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Reverse</READ_TYPE>
            <BASE_COORD>85</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina Genome Analyzer II</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
</EXPERIMENT_SET>
