<STUDY_REF accession="ERP000369" refname="Bodo_saltans_genome_sequencing_project-sc-2010-10-20" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000369</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Bodo_saltans_genome_sequencing_project-sc-2010-10-20</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of barcoded sample library "1643446" for the "Bodo saltans genome sequencing project" study.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="SRS024887"> <POOL> <DEFAULT_MEMBER> <IDENTIFIERS> <PRIMARY_ID>SRS024887</PRIMARY_ID> </IDENTIFIERS> </DEFAULT_MEMBER> <MEMBER accession="ERS016680" member_name="5718_7#1"> <IDENTIFIERS> <PRIMARY_ID>ERS016680</PRIMARY_ID> </IDENTIFIERS> <READ_LABEL read_group_tag="1">barcode_tag</READ_LABEL> </MEMBER> <MEMBER accession="ERS016681" member_name="5718_7#2"> <IDENTIFIERS> <PRIMARY_ID>ERS016681</PRIMARY_ID> </IDENTIFIERS> <READ_LABEL read_group_tag="2">barcode_tag</READ_LABEL> </MEMBER> <MEMBER accession="ERS016682" member_name="5718_7#3"> <IDENTIFIERS> <PRIMARY_ID>ERS016682</PRIMARY_ID> </IDENTIFIERS> <READ_LABEL read_group_tag="3">barcode_tag</READ_LABEL> </MEMBER> <MEMBER accession="ERS016683" member_name="5718_7#4"> <IDENTIFIERS> <PRIMARY_ID>ERS016683</PRIMARY_ID> </IDENTIFIERS> <READ_LABEL read_group_tag="4">barcode_tag</READ_LABEL> </MEMBER> </POOL> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>1643446</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="350"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>No PCR</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>160</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_LABEL>barcode_tag</READ_LABEL> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>BarCode</READ_TYPE> <EXPECTED_BASECALL_TABLE> <BASECALL read_group_tag="1" min_match="7" max_mismatch="1" match_edge="end">ATCACGTT</BASECALL> <BASECALL read_group_tag="2" min_match="7" max_mismatch="1" match_edge="end">CGATGTTT</BASECALL> <BASECALL read_group_tag="3" min_match="7" max_mismatch="1" match_edge="end">TTAGGCAT</BASECALL> <BASECALL read_group_tag="4" min_match="7" max_mismatch="1" match_edge="end">TGACCACT</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>2</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <BASE_COORD>85</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina Genome Analyzer II</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> </EXPERIMENT

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