ERX062229 SC_EXP_7067_5#1 <STUDY_REF accession="ERP000733" refname="Global_phylogeny_of_enterotoxigenic_Escherichia_coli_collection-sc-2011-06-17T09:46:09Z-1867" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000733</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Global_phylogeny_of_enterotoxigenic_Escherichia_coli_collection-sc-2011-06-17T09:46:09Z-1867</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 3910276, constructed from sample accession ERS055619 for study accession ERP000733. This is part of an Illumina multiplexed sequencing run (7067_5). This submission includes reads tagged with the sequence ATCACGTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS055619" refname="Escherichia_coli_E_1018-sc-2011-09-22T20:37:43Z-1280505" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS055619</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Escherichia_coli_E_1018-sc-2011-09-22T20:37:43Z-1280505</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>3910276</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="224" NOMINAL_SDEV="71"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>158</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7067_5#2" center_name="SC" accession="ERX062230"> <IDENTIFIERS> <PRIMARY_ID>ERX062230</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7067_5#2</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000733" refname="Global_phylogeny_of_enterotoxigenic_Escherichia_coli_collection-sc-2011-06-17T09:46:09Z-1867" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000733</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Global_phylogeny_of_enterotoxigenic_Escherichia_coli_collection-sc-2011-06-17T09:46:09Z-1867</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 3910277, constructed from sample accession ERS055620 for study accession ERP000733. This is part of an Illumina multiplexed sequencing run (7067_5). This submission includes reads tagged with the sequence CGATGTTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS055620" refname="Escherichia_coli_E_1334-sc-2011-09-22T20:37:49Z-1280506" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS055620</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Escherichia_coli_E_1334-sc-2011-09-22T20:37:49Z-1280506</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>3910277</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="224" NOMINAL_SDEV="71"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>158</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7067_5#3" center_name="SC" accession="ERX062231"> <IDENTIFIERS> <PRIMARY_ID>ERX062231</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7067_5#3</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000733" refname="Global_phylogeny_of_enterotoxigenic_Escherichia_coli_collection-sc-2011-06-17T09:46:09Z-1867" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000733</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Global_phylogeny_of_enterotoxigenic_Escherichia_coli_collection-sc-2011-06-17T09:46:09Z-1867</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 3910278, constructed from sample accession ERS055621 for study accession ERP000733. This is part of an Illumina multiplexed sequencing run (7067_5). This submission includes reads tagged with the sequence TTAGGCAT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS055621" refname="Escherichia_coli_E_1360-sc-2011-09-22T20:37:50Z-1280507" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS055621</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Escherichia_coli_E_1360-sc-2011-09-22T20:37:50Z-1280507</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>3910278</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="224" NOMINAL_SDEV="71"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>158</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7067_5#4" center_name="SC" accession="ERX062232"> <IDENTIFIERS> <PRIMARY_ID>ERX062232</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7067_5#4</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000733" refname="Global_phylogeny_of_enterotoxigenic_Escherichia_coli_collection-sc-2011-06-17T09:46:09Z-1867" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000733</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Global_phylogeny_of_enterotoxigenic_Escherichia_coli_collection-sc-2011-06-17T09:46:09Z-1867</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 3910279, constructed from sample accession ERS055622 for study accession ERP000733. This is part of an Illumina multiplexed sequencing run (7067_5). This submission includes reads tagged with the sequence TGACCACT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS055622" refname="Escherichia_coli_E_1363-sc-2011-09-22T20:37:50Z-1280508" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS055622</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Escherichia_coli_E_1363-sc-2011-09-22T20:37:50Z-1280508</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>3910279</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="224" NOMINAL_SDEV="71"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>158</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7067_5#5" center_name="SC" accession="ERX062233"> <IDENTIFIERS> <PRIMARY_ID>ERX062233</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7067_5#5</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000733" refname="Global_phylogeny_of_enterotoxigenic_Escherichia_coli_collection-sc-2011-06-17T09:46:09Z-1867" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000733</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Global_phylogeny_of_enterotoxigenic_Escherichia_coli_collection-sc-2011-06-17T09:46:09Z-1867</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 3910280, constructed from sample accession ERS055623 for study accession ERP000733. This is part of an Illumina multiplexed sequencing run (7067_5). This submission includes reads tagged with the sequence ACAGTGGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS055623" refname="Escherichia_coli_E_1407-sc-2011-09-22T20:37:51Z-1280509" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS055623</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Escherichia_coli_E_1407-sc-2011-09-22T20:37:51Z-1280509</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>3910280</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="224" NOMINAL_SDEV="71"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>158</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7067_5#6" center_name="SC" accession="ERX062234"> <IDENTIFIERS> <PRIMARY_ID>ERX062234</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7067_5#6</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000733" refname="Global_phylogeny_of_enterotoxigenic_Escherichia_coli_collection-sc-2011-06-17T09:46:09Z-1867" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000733</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Global_phylogeny_of_enterotoxigenic_Escherichia_coli_collection-sc-2011-06-17T09:46:09Z-1867</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 3910281, constructed from sample accession ERS055624 for study accession ERP000733. This is part of an Illumina multiplexed sequencing run (7067_5). This submission includes reads tagged with the sequence GCCAATGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS055624" refname="Escherichia_coli_E_1433-sc-2011-09-22T20:37:51Z-1280510" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS055624</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Escherichia_coli_E_1433-sc-2011-09-22T20:37:51Z-1280510</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>3910281</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="224" NOMINAL_SDEV="71"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>158</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7067_5#7" center_name="SC" accession="ERX062235"> <IDENTIFIERS> <PRIMARY_ID>ERX062235</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7067_5#7</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000733" refname="Global_phylogeny_of_enterotoxigenic_Escherichia_coli_collection-sc-2011-06-17T09:46:09Z-1867" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000733</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Global_phylogeny_of_enterotoxigenic_Escherichia_coli_collection-sc-2011-06-17T09:46:09Z-1867</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 3910282, constructed from sample accession ERS055625 for study accession ERP000733. This is part of an Illumina multiplexed sequencing run (7067_5). This submission includes reads tagged with the sequence CAGATCTG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS055625" refname="Escherichia_coli_E_1460-sc-2011-09-22T20:37:52Z-1280511" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS055625</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Escherichia_coli_E_1460-sc-2011-09-22T20:37:52Z-1280511</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>3910282</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="224" NOMINAL_SDEV="71"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>158</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7067_5#8" center_name="SC" accession="ERX062236"> <IDENTIFIERS> <PRIMARY_ID>ERX062236</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7067_5#8</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000733" refname="Global_phylogeny_of_enterotoxigenic_Escherichia_coli_collection-sc-2011-06-17T09:46:09Z-1867" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000733</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Global_phylogeny_of_enterotoxigenic_Escherichia_coli_collection-sc-2011-06-17T09:46:09Z-1867</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 3910283, constructed from sample accession ERS055626 for study accession ERP000733. This is part of an Illumina multiplexed sequencing run (7067_5). This submission includes reads tagged with the sequence ACTTGATG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS055626" refname="Escherichia_coli_E_1524-sc-2011-09-22T20:37:53Z-1280512" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS055626</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Escherichia_coli_E_1524-sc-2011-09-22T20:37:53Z-1280512</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>3910283</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="224" NOMINAL_SDEV="71"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>158</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7067_5#9" center_name="SC" accession="ERX062237"> <IDENTIFIERS> <PRIMARY_ID>ERX062237</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7067_5#9</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000733" refname="Global_phylogeny_of_enterotoxigenic_Escherichia_coli_collection-sc-2011-06-17T09:46:09Z-1867" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000733</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Global_phylogeny_of_enterotoxigenic_Escherichia_coli_collection-sc-2011-06-17T09:46:09Z-1867</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 3910284, constructed from sample accession ERS055627 for study accession ERP000733. This is part of an Illumina multiplexed sequencing run (7067_5). This submission includes reads tagged with the sequence GATCAGCG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS055627" refname="Escherichia_coli_E_1527-sc-2011-09-22T20:37:55Z-1280513" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS055627</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Escherichia_coli_E_1527-sc-2011-09-22T20:37:55Z-1280513</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>3910284</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="224" NOMINAL_SDEV="71"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>158</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7067_5#10" center_name="SC" accession="ERX062238"> <IDENTIFIERS> <PRIMARY_ID>ERX062238</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7067_5#10</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000733" refname="Global_phylogeny_of_enterotoxigenic_Escherichia_coli_collection-sc-2011-06-17T09:46:09Z-1867" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000733</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Global_phylogeny_of_enterotoxigenic_Escherichia_coli_collection-sc-2011-06-17T09:46:09Z-1867</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 3910285, constructed from sample accession ERS055628 for study accession ERP000733. This is part of an Illumina multiplexed sequencing run (7067_5). This submission includes reads tagged with the sequence TAGCTTGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS055628" refname="Escherichia_coli_E_1535-sc-2011-09-22T20:37:56Z-1280514" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS055628</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Escherichia_coli_E_1535-sc-2011-09-22T20:37:56Z-1280514</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>3910285</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="224" NOMINAL_SDEV="71"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>158</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7067_5#11" center_name="SC" accession="ERX062239"> <IDENTIFIERS> <PRIMARY_ID>ERX062239</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7067_5#11</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000733" refname="Global_phylogeny_of_enterotoxigenic_Escherichia_coli_collection-sc-2011-06-17T09:46:09Z-1867" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000733</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Global_phylogeny_of_enterotoxigenic_Escherichia_coli_collection-sc-2011-06-17T09:46:09Z-1867</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 3910286, constructed from sample accession ERS055629 for study accession ERP000733. This is part of an Illumina multiplexed sequencing run (7067_5). This submission includes reads tagged with the sequence GGCTACAG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS055629" refname="Escherichia_coli_E_1593-sc-2011-09-22T20:37:56Z-1280515" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS055629</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Escherichia_coli_E_1593-sc-2011-09-22T20:37:56Z-1280515</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>3910286</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="224" NOMINAL_SDEV="71"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>158</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7067_5#12" center_name="SC" accession="ERX062240"> <IDENTIFIERS> <PRIMARY_ID>ERX062240</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7067_5#12</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000733" refname="Global_phylogeny_of_enterotoxigenic_Escherichia_coli_collection-sc-2011-06-17T09:46:09Z-1867" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000733</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Global_phylogeny_of_enterotoxigenic_Escherichia_coli_collection-sc-2011-06-17T09:46:09Z-1867</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 3910287, constructed from sample accession ERS055630 for study accession ERP000733. This is part of an Illumina multiplexed sequencing run (7067_5). This submission includes reads tagged with the sequence CTTGTACT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS055630" refname="Escherichia_coli_E_1620-sc-2011-09-22T20:37:57Z-1280516" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS055630</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Escherichia_coli_E_1620-sc-2011-09-22T20:37:57Z-1280516</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>3910287</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="224" NOMINAL_SDEV="71"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>158</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7067_5#13" center_name="SC" accession="ERX062241"> <IDENTIFIERS> <PRIMARY_ID>ERX062241</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7067_5#13</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000733" refname="Global_phylogeny_of_enterotoxigenic_Escherichia_coli_collection-sc-2011-06-17T09:46:09Z-1867" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000733</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Global_phylogeny_of_enterotoxigenic_Escherichia_coli_collection-sc-2011-06-17T09:46:09Z-1867</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 3910288, constructed from sample accession ERS055631 for study accession ERP000733. This is part of an Illumina multiplexed sequencing run (7067_5). This submission includes reads tagged with the sequence TGGTTGTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS055631" refname="Escherichia_coli_E_1635-sc-2011-09-22T20:37:57Z-1280517" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS055631</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Escherichia_coli_E_1635-sc-2011-09-22T20:37:57Z-1280517</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>3910288</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="224" NOMINAL_SDEV="71"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>158</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7067_5#14" center_name="SC" accession="ERX062242"> <IDENTIFIERS> <PRIMARY_ID>ERX062242</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7067_5#14</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000733" refname="Global_phylogeny_of_enterotoxigenic_Escherichia_coli_collection-sc-2011-06-17T09:46:09Z-1867" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000733</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Global_phylogeny_of_enterotoxigenic_Escherichia_coli_collection-sc-2011-06-17T09:46:09Z-1867</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 3910289, constructed from sample accession ERS055632 for study accession ERP000733. This is part of an Illumina multiplexed sequencing run (7067_5). This submission includes reads tagged with the sequence TCTCGGTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS055632" refname="Escherichia_coli_E_1649-sc-2011-09-22T20:37:58Z-1280518" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS055632</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Escherichia_coli_E_1649-sc-2011-09-22T20:37:58Z-1280518</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>3910289</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="224" NOMINAL_SDEV="71"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>158</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7067_5#15" center_name="SC" accession="ERX062243"> <IDENTIFIERS> <PRIMARY_ID>ERX062243</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7067_5#15</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000733" refname="Global_phylogeny_of_enterotoxigenic_Escherichia_coli_collection-sc-2011-06-17T09:46:09Z-1867" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000733</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Global_phylogeny_of_enterotoxigenic_Escherichia_coli_collection-sc-2011-06-17T09:46:09Z-1867</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 3910290, constructed from sample accession ERS055633 for study accession ERP000733. This is part of an Illumina multiplexed sequencing run (7067_5). This submission includes reads tagged with the sequence TAAGCGTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS055633" refname="Escherichia_coli_E_1657-sc-2011-09-22T20:37:59Z-1280519" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS055633</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Escherichia_coli_E_1657-sc-2011-09-22T20:37:59Z-1280519</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>3910290</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="224" NOMINAL_SDEV="71"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>158</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7067_5#16" center_name="SC" accession="ERX062244"> <IDENTIFIERS> <PRIMARY_ID>ERX062244</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7067_5#16</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000733" refname="Global_phylogeny_of_enterotoxigenic_Escherichia_coli_collection-sc-2011-06-17T09:46:09Z-1867" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000733</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Global_phylogeny_of_enterotoxigenic_Escherichia_coli_collection-sc-2011-06-17T09:46:09Z-1867</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 3910291, constructed from sample accession ERS055634 for study accession ERP000733. This is part of an Illumina multiplexed sequencing run (7067_5). This submission includes reads tagged with the sequence TCCGTCTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS055634" refname="Escherichia_coli_E_1667-sc-2011-09-22T20:37:59Z-1280520" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS055634</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Escherichia_coli_E_1667-sc-2011-09-22T20:37:59Z-1280520</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>3910291</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="224" NOMINAL_SDEV="71"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>158</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7067_5#17" center_name="SC" accession="ERX062245"> <IDENTIFIERS> <PRIMARY_ID>ERX062245</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7067_5#17</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000733" refname="Global_phylogeny_of_enterotoxigenic_Escherichia_coli_collection-sc-2011-06-17T09:46:09Z-1867" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000733</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Global_phylogeny_of_enterotoxigenic_Escherichia_coli_collection-sc-2011-06-17T09:46:09Z-1867</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 3910292, constructed from sample accession ERS055635 for study accession ERP000733. This is part of an Illumina multiplexed sequencing run (7067_5). This submission includes reads tagged with the sequence TGTACCTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS055635" refname="Escherichia_coli_E_1724-sc-2011-09-22T20:38:02Z-1280521" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS055635</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Escherichia_coli_E_1724-sc-2011-09-22T20:38:02Z-1280521</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>3910292</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="224" NOMINAL_SDEV="71"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>158</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7067_5#18" center_name="SC" accession="ERX062246"> <IDENTIFIERS> <PRIMARY_ID>ERX062246</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7067_5#18</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000733" refname="Global_phylogeny_of_enterotoxigenic_Escherichia_coli_collection-sc-2011-06-17T09:46:09Z-1867" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000733</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Global_phylogeny_of_enterotoxigenic_Escherichia_coli_collection-sc-2011-06-17T09:46:09Z-1867</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 3910293, constructed from sample accession ERS055636 for study accession ERP000733. This is part of an Illumina multiplexed sequencing run (7067_5). This submission includes reads tagged with the sequence TTCTGTGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS055636" refname="Escherichia_coli_E_1741-sc-2011-09-22T20:38:02Z-1280522" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS055636</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Escherichia_coli_E_1741-sc-2011-09-22T20:38:02Z-1280522</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>3910293</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="224" NOMINAL_SDEV="71"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>158</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7067_5#19" center_name="SC" accession="ERX062247"> <IDENTIFIERS> <PRIMARY_ID>ERX062247</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7067_5#19</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000733" refname="Global_phylogeny_of_enterotoxigenic_Escherichia_coli_collection-sc-2011-06-17T09:46:09Z-1867" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000733</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Global_phylogeny_of_enterotoxigenic_Escherichia_coli_collection-sc-2011-06-17T09:46:09Z-1867</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 3910294, constructed from sample accession ERS055637 for study accession ERP000733. This is part of an Illumina multiplexed sequencing run (7067_5). This submission includes reads tagged with the sequence TCTGCTGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS055637" refname="Escherichia_coli_E_1750-sc-2011-09-22T20:38:03Z-1280523" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS055637</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Escherichia_coli_E_1750-sc-2011-09-22T20:38:03Z-1280523</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>3910294</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="224" NOMINAL_SDEV="71"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>158</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7067_5#20" center_name="SC" accession="ERX062248"> <IDENTIFIERS> <PRIMARY_ID>ERX062248</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7067_5#20</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000733" refname="Global_phylogeny_of_enterotoxigenic_Escherichia_coli_collection-sc-2011-06-17T09:46:09Z-1867" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000733</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Global_phylogeny_of_enterotoxigenic_Escherichia_coli_collection-sc-2011-06-17T09:46:09Z-1867</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 3910295, constructed from sample accession ERS055638 for study accession ERP000733. This is part of an Illumina multiplexed sequencing run (7067_5). This submission includes reads tagged with the sequence TTGGAGGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS055638" refname="Escherichia_coli_E_1760-sc-2011-09-22T20:38:03Z-1280524" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS055638</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Escherichia_coli_E_1760-sc-2011-09-22T20:38:03Z-1280524</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>3910295</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="224" NOMINAL_SDEV="71"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>158</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7067_5#21" center_name="SC" accession="ERX062249"> <IDENTIFIERS> <PRIMARY_ID>ERX062249</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7067_5#21</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000733" refname="Global_phylogeny_of_enterotoxigenic_Escherichia_coli_collection-sc-2011-06-17T09:46:09Z-1867" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000733</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Global_phylogeny_of_enterotoxigenic_Escherichia_coli_collection-sc-2011-06-17T09:46:09Z-1867</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 3910296, constructed from sample accession ERS055639 for study accession ERP000733. This is part of an Illumina multiplexed sequencing run (7067_5). This submission includes reads tagged with the sequence TCGAGCGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS055639" refname="Escherichia_coli_E_1795-sc-2011-09-22T20:38:04Z-1280525" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS055639</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Escherichia_coli_E_1795-sc-2011-09-22T20:38:04Z-1280525</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>3910296</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="224" NOMINAL_SDEV="71"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>158</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7067_5#22" center_name="SC" accession="ERX062250"> <IDENTIFIERS> <PRIMARY_ID>ERX062250</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7067_5#22</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000733" refname="Global_phylogeny_of_enterotoxigenic_Escherichia_coli_collection-sc-2011-06-17T09:46:09Z-1867" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000733</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Global_phylogeny_of_enterotoxigenic_Escherichia_coli_collection-sc-2011-06-17T09:46:09Z-1867</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 3910297, constructed from sample accession ERS055640 for study accession ERP000733. This is part of an Illumina multiplexed sequencing run (7067_5). This submission includes reads tagged with the sequence TGATACGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS055640" refname="Escherichia_coli_E_1797-sc-2011-09-22T20:38:05Z-1280526" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS055640</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Escherichia_coli_E_1797-sc-2011-09-22T20:38:05Z-1280526</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>3910297</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="224" NOMINAL_SDEV="71"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>158</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7067_5#23" center_name="SC" accession="ERX062251"> <IDENTIFIERS> <PRIMARY_ID>ERX062251</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7067_5#23</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000733" refname="Global_phylogeny_of_enterotoxigenic_Escherichia_coli_collection-sc-2011-06-17T09:46:09Z-1867" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000733</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Global_phylogeny_of_enterotoxigenic_Escherichia_coli_collection-sc-2011-06-17T09:46:09Z-1867</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 3910298, constructed from sample accession ERS055641 for study accession ERP000733. This is part of an Illumina multiplexed sequencing run (7067_5). This submission includes reads tagged with the sequence TGCATAGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS055641" refname="Escherichia_coli_E_1841-sc-2011-09-22T20:38:05Z-1280527" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS055641</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Escherichia_coli_E_1841-sc-2011-09-22T20:38:05Z-1280527</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>3910298</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="224" NOMINAL_SDEV="71"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>158</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7067_5#24" center_name="SC" accession="ERX062252"> <IDENTIFIERS> <PRIMARY_ID>ERX062252</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7067_5#24</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000733" refname="Global_phylogeny_of_enterotoxigenic_Escherichia_coli_collection-sc-2011-06-17T09:46:09Z-1867" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000733</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Global_phylogeny_of_enterotoxigenic_Escherichia_coli_collection-sc-2011-06-17T09:46:09Z-1867</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 3910299, constructed from sample accession ERS055642 for study accession ERP000733. This is part of an Illumina multiplexed sequencing run (7067_5). This submission includes reads tagged with the sequence TTGACTCT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS055642" refname="Escherichia_coli_E_1883-sc-2011-09-22T20:38:08Z-1280528" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS055642</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Escherichia_coli_E_1883-sc-2011-09-22T20:38:08Z-1280528</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>3910299</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="224" NOMINAL_SDEV="71"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>158</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7067_5#25" center_name="SC" accession="ERX062253"> <IDENTIFIERS> <PRIMARY_ID>ERX062253</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7067_5#25</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000733" refname="Global_phylogeny_of_enterotoxigenic_Escherichia_coli_collection-sc-2011-06-17T09:46:09Z-1867" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000733</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Global_phylogeny_of_enterotoxigenic_Escherichia_coli_collection-sc-2011-06-17T09:46:09Z-1867</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 3910300, constructed from sample accession ERS055643 for study accession ERP000733. This is part of an Illumina multiplexed sequencing run (7067_5). This submission includes reads tagged with the sequence TGCGATCT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS055643" refname="Escherichia_coli_E_1918-sc-2011-09-22T20:38:09Z-1280529" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS055643</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Escherichia_coli_E_1918-sc-2011-09-22T20:38:09Z-1280529</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>3910300</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="224" NOMINAL_SDEV="71"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>158</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7067_5#26" center_name="SC" accession="ERX062254"> <IDENTIFIERS> <PRIMARY_ID>ERX062254</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7067_5#26</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000733" refname="Global_phylogeny_of_enterotoxigenic_Escherichia_coli_collection-sc-2011-06-17T09:46:09Z-1867" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000733</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Global_phylogeny_of_enterotoxigenic_Escherichia_coli_collection-sc-2011-06-17T09:46:09Z-1867</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 3910301, constructed from sample accession ERS055644 for study accession ERP000733. This is part of an Illumina multiplexed sequencing run (7067_5). This submission includes reads tagged with the sequence TTCCTGCT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS055644" refname="Escherichia_coli_E_1939-sc-2011-09-22T20:38:09Z-1280530" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS055644</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Escherichia_coli_E_1939-sc-2011-09-22T20:38:09Z-1280530</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>3910301</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="224" NOMINAL_SDEV="71"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>158</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7067_5#27" center_name="SC" accession="ERX062255"> <IDENTIFIERS> <PRIMARY_ID>ERX062255</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7067_5#27</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000733" refname="Global_phylogeny_of_enterotoxigenic_Escherichia_coli_collection-sc-2011-06-17T09:46:09Z-1867" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000733</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Global_phylogeny_of_enterotoxigenic_Escherichia_coli_collection-sc-2011-06-17T09:46:09Z-1867</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 3910302, constructed from sample accession ERS055645 for study accession ERP000733. This is part of an Illumina multiplexed sequencing run (7067_5). This submission includes reads tagged with the sequence TAGTGACT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS055645" refname="Escherichia_coli_E_1947-sc-2011-09-22T20:38:10Z-1280531" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS055645</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Escherichia_coli_E_1947-sc-2011-09-22T20:38:10Z-1280531</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>3910302</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="224" NOMINAL_SDEV="71"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>158</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7067_5#28" center_name="SC" accession="ERX062256"> <IDENTIFIERS> <PRIMARY_ID>ERX062256</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7067_5#28</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000733" refname="Global_phylogeny_of_enterotoxigenic_Escherichia_coli_collection-sc-2011-06-17T09:46:09Z-1867" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000733</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Global_phylogeny_of_enterotoxigenic_Escherichia_coli_collection-sc-2011-06-17T09:46:09Z-1867</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 3910303, constructed from sample accession ERS055646 for study accession ERP000733. This is part of an Illumina multiplexed sequencing run (7067_5). This submission includes reads tagged with the sequence TACAGGAT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS055646" refname="Escherichia_coli_E_1994-sc-2011-09-22T20:38:11Z-1280532" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS055646</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Escherichia_coli_E_1994-sc-2011-09-22T20:38:11Z-1280532</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>3910303</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="224" NOMINAL_SDEV="71"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>158</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7067_5#29" center_name="SC" accession="ERX062257"> <IDENTIFIERS> <PRIMARY_ID>ERX062257</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7067_5#29</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000733" refname="Global_phylogeny_of_enterotoxigenic_Escherichia_coli_collection-sc-2011-06-17T09:46:09Z-1867" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000733</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Global_phylogeny_of_enterotoxigenic_Escherichia_coli_collection-sc-2011-06-17T09:46:09Z-1867</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 3910304, constructed from sample accession ERS055647 for study accession ERP000733. This is part of an Illumina multiplexed sequencing run (7067_5). This submission includes reads tagged with the sequence TCCTCAAT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS055647" refname="Escherichia_coli_E_2088-sc-2011-09-22T20:38:11Z-1280533" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS055647</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Escherichia_coli_E_2088-sc-2011-09-22T20:38:11Z-1280533</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>3910304</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="224" NOMINAL_SDEV="71"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>158</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> </EXPERIMENT_SET>