ERX064285 SC_EXP_5106_8#5 <STUDY_REF accession="ERP000379" refname="Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000379</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 426700, constructed from sample accession ERS018755 for study accession ERP000379. This is part of an Illumina multiplexed sequencing run (5106_8). This submission includes reads tagged with the sequence ATCACGTTA.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS018755" refname="Schistosoma_mansoni_transposon_integration_site_sequencing-sc-2011-01-27-253062" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS018755</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schistosoma_mansoni_transposon_integration_site_sequencing-sc-2011-01-27-253062</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>426700</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="164"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Custom</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>161</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina Genome Analyzer II</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_5106_8#6" center_name="SC" accession="ERX064286"> <IDENTIFIERS> <PRIMARY_ID>ERX064286</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_5106_8#6</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000379" refname="Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000379</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 426701, constructed from sample accession ERS018756 for study accession ERP000379. This is part of an Illumina multiplexed sequencing run (5106_8). This submission includes reads tagged with the sequence GATCAGCGA.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS018756" refname="Schistosoma_mansoni_transposon_integration_site_sequencing-sc-2011-01-27-253063" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS018756</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schistosoma_mansoni_transposon_integration_site_sequencing-sc-2011-01-27-253063</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>426701</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="164"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Custom</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>161</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina Genome Analyzer II</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_5106_8#7" center_name="SC" accession="ERX064287"> <IDENTIFIERS> <PRIMARY_ID>ERX064287</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_5106_8#7</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000379" refname="Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000379</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 426702, constructed from sample accession ERS018757 for study accession ERP000379. This is part of an Illumina multiplexed sequencing run (5106_8). This submission includes reads tagged with the sequence CAGATCTGA.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS018757" refname="Schistosoma_mansoni_transposon_integration_site_sequencing-sc-2011-01-27-253064" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS018757</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schistosoma_mansoni_transposon_integration_site_sequencing-sc-2011-01-27-253064</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>426702</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="164"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Custom</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>161</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina Genome Analyzer II</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_5106_8#8" center_name="SC" accession="ERX064288"> <IDENTIFIERS> <PRIMARY_ID>ERX064288</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_5106_8#8</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000379" refname="Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000379</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 426703, constructed from sample accession ERS018758 for study accession ERP000379. This is part of an Illumina multiplexed sequencing run (5106_8). This submission includes reads tagged with the sequence TTAGGCATA.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS018758" refname="Schistosoma_mansoni_transposon_integration_site_sequencing-sc-2011-01-27-253065" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS018758</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schistosoma_mansoni_transposon_integration_site_sequencing-sc-2011-01-27-253065</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>426703</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="164"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Custom</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>161</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina Genome Analyzer II</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_5470_7#9" center_name="SC" accession="ERX064289"> <IDENTIFIERS> <PRIMARY_ID>ERX064289</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_5470_7#9</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000379" refname="Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000379</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 1392903, constructed from sample accession ERS017013 for study accession ERP000379. This is part of an Illumina multiplexed sequencing run (5470_7). This submission includes reads tagged with the sequence GGCTACAG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS017013" refname="Schisto_MLV_insertion_site_sequencing-sc-2010-11-03-1001887" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS017013</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schisto_MLV_insertion_site_sequencing-sc-2010-11-03-1001887</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>1392903</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="6"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Custom</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>161</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina Genome Analyzer II</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_5470_7#10" center_name="SC" accession="ERX064290"> <IDENTIFIERS> <PRIMARY_ID>ERX064290</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_5470_7#10</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000379" refname="Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000379</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 1392907, constructed from sample accession ERS017062 for study accession ERP000379. This is part of an Illumina multiplexed sequencing run (5470_7). This submission includes reads tagged with the sequence CTTGTACT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS017062" refname="Schisto_MLV_insertion_site_sequencing-sc-2010-11-05-1004914" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS017062</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schisto_MLV_insertion_site_sequencing-sc-2010-11-05-1004914</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>1392907</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="6"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Custom</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>161</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina Genome Analyzer II</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_5470_7#11" center_name="SC" accession="ERX064291"> <IDENTIFIERS> <PRIMARY_ID>ERX064291</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_5470_7#11</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000379" refname="Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000379</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 1392911, constructed from sample accession ERS017058 for study accession ERP000379. This is part of an Illumina multiplexed sequencing run (5470_7). This submission includes reads tagged with the sequence ACTTGATG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS017058" refname="Schisto_MLV_insertion_site_sequencing-sc-2010-11-05-1004918" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS017058</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schisto_MLV_insertion_site_sequencing-sc-2010-11-05-1004918</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>1392911</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="6"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Custom</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>161</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina Genome Analyzer II</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_5470_7#12" center_name="SC" accession="ERX064292"> <IDENTIFIERS> <PRIMARY_ID>ERX064292</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_5470_7#12</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000379" refname="Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000379</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 1392915, constructed from sample accession ERS017054 for study accession ERP000379. This is part of an Illumina multiplexed sequencing run (5470_7). This submission includes reads tagged with the sequence TGACCACT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS017054" refname="Schisto_MLV_insertion_site_sequencing-sc-2010-11-05-1004922" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS017054</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schisto_MLV_insertion_site_sequencing-sc-2010-11-05-1004922</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>1392915</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="6"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Custom</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>161</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina Genome Analyzer II</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_5470_7#17" center_name="SC" accession="ERX064293"> <IDENTIFIERS> <PRIMARY_ID>ERX064293</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_5470_7#17</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000379" refname="Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000379</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 1392904, constructed from sample accession ERS017014 for study accession ERP000379. This is part of an Illumina multiplexed sequencing run (5470_7). This submission includes reads tagged with the sequence TGTACCTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS017014" refname="Schisto_MLV_insertion_site_sequencing-sc-2010-11-03-1001888" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS017014</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schisto_MLV_insertion_site_sequencing-sc-2010-11-03-1001888</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>1392904</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="6"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Custom</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>161</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina Genome Analyzer II</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_5470_7#18" center_name="SC" accession="ERX064294"> <IDENTIFIERS> <PRIMARY_ID>ERX064294</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_5470_7#18</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000379" refname="Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000379</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 1392908, constructed from sample accession ERS017061 for study accession ERP000379. This is part of an Illumina multiplexed sequencing run (5470_7). This submission includes reads tagged with the sequence TTCTGTGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS017061" refname="Schisto_MLV_insertion_site_sequencing-sc-2010-11-05-1004915" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS017061</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schisto_MLV_insertion_site_sequencing-sc-2010-11-05-1004915</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>1392908</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="6"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Custom</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>161</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina Genome Analyzer II</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_5470_7#19" center_name="SC" accession="ERX064295"> <IDENTIFIERS> <PRIMARY_ID>ERX064295</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_5470_7#19</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000379" refname="Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000379</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 1392912, constructed from sample accession ERS017057 for study accession ERP000379. This is part of an Illumina multiplexed sequencing run (5470_7). This submission includes reads tagged with the sequence TCTGCTGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS017057" refname="Schisto_MLV_insertion_site_sequencing-sc-2010-11-05-1004919" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS017057</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schisto_MLV_insertion_site_sequencing-sc-2010-11-05-1004919</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>1392912</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="6"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Custom</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>161</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina Genome Analyzer II</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_5470_7#20" center_name="SC" accession="ERX064296"> <IDENTIFIERS> <PRIMARY_ID>ERX064296</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_5470_7#20</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000379" refname="Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000379</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 1392916, constructed from sample accession ERS017053 for study accession ERP000379. This is part of an Illumina multiplexed sequencing run (5470_7). This submission includes reads tagged with the sequence TTGGAGGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS017053" refname="Schisto_MLV_insertion_site_sequencing-sc-2010-11-05-1004923" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS017053</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schisto_MLV_insertion_site_sequencing-sc-2010-11-05-1004923</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>1392916</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="6"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Custom</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>161</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina Genome Analyzer II</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_5470_7#25" center_name="SC" accession="ERX064297"> <IDENTIFIERS> <PRIMARY_ID>ERX064297</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_5470_7#25</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000379" refname="Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000379</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 1392905, constructed from sample accession ERS017015 for study accession ERP000379. This is part of an Illumina multiplexed sequencing run (5470_7). This submission includes reads tagged with the sequence TGCGATCT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS017015" refname="Schisto_MLV_insertion_site_sequencing-sc-2010-11-03-1001889" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS017015</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schisto_MLV_insertion_site_sequencing-sc-2010-11-03-1001889</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>1392905</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="6"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Custom</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>161</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina Genome Analyzer II</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_5470_7#27" center_name="SC" accession="ERX064298"> <IDENTIFIERS> <PRIMARY_ID>ERX064298</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_5470_7#27</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000379" refname="Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000379</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 1392909, constructed from sample accession ERS017060 for study accession ERP000379. This is part of an Illumina multiplexed sequencing run (5470_7). This submission includes reads tagged with the sequence TAGTGACT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS017060" refname="Schisto_MLV_insertion_site_sequencing-sc-2010-11-05-1004916" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS017060</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schisto_MLV_insertion_site_sequencing-sc-2010-11-05-1004916</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>1392909</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="6"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Custom</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>161</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina Genome Analyzer II</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_5470_7#28" center_name="SC" accession="ERX064299"> <IDENTIFIERS> <PRIMARY_ID>ERX064299</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_5470_7#28</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000379" refname="Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000379</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 1392913, constructed from sample accession ERS017056 for study accession ERP000379. This is part of an Illumina multiplexed sequencing run (5470_7). This submission includes reads tagged with the sequence TACAGGAT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS017056" refname="Schisto_MLV_insertion_site_sequencing-sc-2010-11-05-1004920" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS017056</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schisto_MLV_insertion_site_sequencing-sc-2010-11-05-1004920</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>1392913</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="6"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Custom</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>161</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina Genome Analyzer II</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_5470_7#29" center_name="SC" accession="ERX064300"> <IDENTIFIERS> <PRIMARY_ID>ERX064300</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_5470_7#29</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000379" refname="Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000379</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 1392917, constructed from sample accession ERS017052 for study accession ERP000379. This is part of an Illumina multiplexed sequencing run (5470_7). This submission includes reads tagged with the sequence TCCTCAAT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS017052" refname="Schisto_MLV_insertion_site_sequencing-sc-2010-11-05-1004924" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS017052</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schisto_MLV_insertion_site_sequencing-sc-2010-11-05-1004924</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>1392917</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="6"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Custom</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>161</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina Genome Analyzer II</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_5470_7#34" center_name="SC" accession="ERX064301"> <IDENTIFIERS> <PRIMARY_ID>ERX064301</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_5470_7#34</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000379" refname="Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000379</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 1392906, constructed from sample accession ERS017016 for study accession ERP000379. This is part of an Illumina multiplexed sequencing run (5470_7). This submission includes reads tagged with the sequence TAACGCTG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS017016" refname="Schisto_MLV_insertion_site_sequencing-sc-2010-11-03-1001890" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS017016</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schisto_MLV_insertion_site_sequencing-sc-2010-11-03-1001890</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>1392906</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="6"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Custom</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>161</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina Genome Analyzer II</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_5470_7#35" center_name="SC" accession="ERX064302"> <IDENTIFIERS> <PRIMARY_ID>ERX064302</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_5470_7#35</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000379" refname="Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000379</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 1392910, constructed from sample accession ERS017059 for study accession ERP000379. This is part of an Illumina multiplexed sequencing run (5470_7). This submission includes reads tagged with the sequence TTGGTATG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS017059" refname="Schisto_MLV_insertion_site_sequencing-sc-2010-11-05-1004917" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS017059</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schisto_MLV_insertion_site_sequencing-sc-2010-11-05-1004917</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>1392910</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="6"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Custom</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>161</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina Genome Analyzer II</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_5470_7#37" center_name="SC" accession="ERX064304"> <IDENTIFIERS> <PRIMARY_ID>ERX064304</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_5470_7#37</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000379" refname="Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000379</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 1392918, constructed from sample accession ERS017051 for study accession ERP000379. This is part of an Illumina multiplexed sequencing run (5470_7). This submission includes reads tagged with the sequence TACTTCGG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS017051" refname="Schisto_MLV_insertion_site_sequencing-sc-2010-11-05-1004925" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS017051</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schisto_MLV_insertion_site_sequencing-sc-2010-11-05-1004925</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>1392918</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="6"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Custom</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>161</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina Genome Analyzer II</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_5470_8#13" center_name="SC" accession="ERX064305"> <IDENTIFIERS> <PRIMARY_ID>ERX064305</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_5470_8#13</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000379" refname="Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000379</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 1392936, constructed from sample accession ERS017013 for study accession ERP000379. This is part of an Illumina multiplexed sequencing run (5470_8). This submission includes reads tagged with the sequence TGGTTGTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS017013" refname="Schisto_MLV_insertion_site_sequencing-sc-2010-11-03-1001887" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS017013</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schisto_MLV_insertion_site_sequencing-sc-2010-11-03-1001887</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>1392936</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="71"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Custom</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>161</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina Genome Analyzer II</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_5470_8#14" center_name="SC" accession="ERX064306"> <IDENTIFIERS> <PRIMARY_ID>ERX064306</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_5470_8#14</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000379" refname="Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000379</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 1392940, constructed from sample accession ERS017062 for study accession ERP000379. This is part of an Illumina multiplexed sequencing run (5470_8). This submission includes reads tagged with the sequence TCTCGGTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS017062" refname="Schisto_MLV_insertion_site_sequencing-sc-2010-11-05-1004914" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS017062</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schisto_MLV_insertion_site_sequencing-sc-2010-11-05-1004914</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>1392940</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="71"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Custom</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>161</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina Genome Analyzer II</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_5470_8#15" center_name="SC" accession="ERX064307"> <IDENTIFIERS> <PRIMARY_ID>ERX064307</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_5470_8#15</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000379" refname="Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000379</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 1392944, constructed from sample accession ERS017058 for study accession ERP000379. This is part of an Illumina multiplexed sequencing run (5470_8). This submission includes reads tagged with the sequence TAAGCGTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS017058" refname="Schisto_MLV_insertion_site_sequencing-sc-2010-11-05-1004918" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS017058</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schisto_MLV_insertion_site_sequencing-sc-2010-11-05-1004918</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>1392944</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="71"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Custom</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>161</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina Genome Analyzer II</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_5470_8#16" center_name="SC" accession="ERX064308"> <IDENTIFIERS> <PRIMARY_ID>ERX064308</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_5470_8#16</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000379" refname="Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000379</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 1392948, constructed from sample accession ERS017054 for study accession ERP000379. This is part of an Illumina multiplexed sequencing run (5470_8). This submission includes reads tagged with the sequence TCCGTCTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS017054" refname="Schisto_MLV_insertion_site_sequencing-sc-2010-11-05-1004922" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS017054</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schisto_MLV_insertion_site_sequencing-sc-2010-11-05-1004922</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>1392948</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="71"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Custom</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>161</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina Genome Analyzer II</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_5470_8#21" center_name="SC" accession="ERX064309"> <IDENTIFIERS> <PRIMARY_ID>ERX064309</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_5470_8#21</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000379" refname="Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000379</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 1392937, constructed from sample accession ERS017014 for study accession ERP000379. This is part of an Illumina multiplexed sequencing run (5470_8). This submission includes reads tagged with the sequence TCGAGCGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS017014" refname="Schisto_MLV_insertion_site_sequencing-sc-2010-11-03-1001888" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS017014</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schisto_MLV_insertion_site_sequencing-sc-2010-11-03-1001888</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>1392937</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="71"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Custom</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>161</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina Genome Analyzer II</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_5470_8#22" center_name="SC" accession="ERX064310"> <IDENTIFIERS> <PRIMARY_ID>ERX064310</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_5470_8#22</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000379" refname="Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000379</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 1392941, constructed from sample accession ERS017061 for study accession ERP000379. This is part of an Illumina multiplexed sequencing run (5470_8). This submission includes reads tagged with the sequence TGATACGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS017061" refname="Schisto_MLV_insertion_site_sequencing-sc-2010-11-05-1004915" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS017061</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schisto_MLV_insertion_site_sequencing-sc-2010-11-05-1004915</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>1392941</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="71"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Custom</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>161</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina Genome Analyzer II</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_5470_8#23" center_name="SC" accession="ERX064311"> <IDENTIFIERS> <PRIMARY_ID>ERX064311</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_5470_8#23</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000379" refname="Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000379</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 1392945, constructed from sample accession ERS017057 for study accession ERP000379. This is part of an Illumina multiplexed sequencing run (5470_8). This submission includes reads tagged with the sequence TGCATAGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS017057" refname="Schisto_MLV_insertion_site_sequencing-sc-2010-11-05-1004919" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS017057</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schisto_MLV_insertion_site_sequencing-sc-2010-11-05-1004919</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>1392945</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="71"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Custom</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>161</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina Genome Analyzer II</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_5470_8#24" center_name="SC" accession="ERX064312"> <IDENTIFIERS> <PRIMARY_ID>ERX064312</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_5470_8#24</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000379" refname="Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000379</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 1392949, constructed from sample accession ERS017053 for study accession ERP000379. This is part of an Illumina multiplexed sequencing run (5470_8). This submission includes reads tagged with the sequence TTGACTCT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS017053" refname="Schisto_MLV_insertion_site_sequencing-sc-2010-11-05-1004923" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS017053</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schisto_MLV_insertion_site_sequencing-sc-2010-11-05-1004923</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>1392949</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="71"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Custom</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>161</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina Genome Analyzer II</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_5470_8#30" center_name="SC" accession="ERX064313"> <IDENTIFIERS> <PRIMARY_ID>ERX064313</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_5470_8#30</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000379" refname="Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000379</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 1392938, constructed from sample accession ERS017015 for study accession ERP000379. This is part of an Illumina multiplexed sequencing run (5470_8). This submission includes reads tagged with the sequence TGTGGTTG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS017015" refname="Schisto_MLV_insertion_site_sequencing-sc-2010-11-03-1001889" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS017015</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schisto_MLV_insertion_site_sequencing-sc-2010-11-03-1001889</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>1392938</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="71"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Custom</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>161</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina Genome Analyzer II</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_5470_8#31" center_name="SC" accession="ERX064314"> <IDENTIFIERS> <PRIMARY_ID>ERX064314</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_5470_8#31</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000379" refname="Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000379</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 1392942, constructed from sample accession ERS017060 for study accession ERP000379. This is part of an Illumina multiplexed sequencing run (5470_8). This submission includes reads tagged with the sequence TAGTCTTG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS017060" refname="Schisto_MLV_insertion_site_sequencing-sc-2010-11-05-1004916" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS017060</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schisto_MLV_insertion_site_sequencing-sc-2010-11-05-1004916</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>1392942</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="71"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Custom</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>161</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina Genome Analyzer II</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_5470_8#33" center_name="SC" accession="ERX064315"> <IDENTIFIERS> <PRIMARY_ID>ERX064315</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_5470_8#33</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000379" refname="Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000379</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 1392950, constructed from sample accession ERS017052 for study accession ERP000379. This is part of an Illumina multiplexed sequencing run (5470_8). This submission includes reads tagged with the sequence TCGAAGTG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS017052" refname="Schisto_MLV_insertion_site_sequencing-sc-2010-11-05-1004924" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS017052</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schisto_MLV_insertion_site_sequencing-sc-2010-11-05-1004924</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>1392950</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="71"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Custom</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>161</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina Genome Analyzer II</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_5470_8#38" center_name="SC" accession="ERX064316"> <IDENTIFIERS> <PRIMARY_ID>ERX064316</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_5470_8#38</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000379" refname="Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000379</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 1392939, constructed from sample accession ERS017016 for study accession ERP000379. This is part of an Illumina multiplexed sequencing run (5470_8). This submission includes reads tagged with the sequence TCTCACGG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS017016" refname="Schisto_MLV_insertion_site_sequencing-sc-2010-11-03-1001890" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS017016</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schisto_MLV_insertion_site_sequencing-sc-2010-11-03-1001890</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>1392939</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="71"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Custom</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>161</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina Genome Analyzer II</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_5470_8#39" center_name="SC" accession="ERX064317"> <IDENTIFIERS> <PRIMARY_ID>ERX064317</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_5470_8#39</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000379" refname="Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000379</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 1392943, constructed from sample accession ERS017059 for study accession ERP000379. This is part of an Illumina multiplexed sequencing run (5470_8). This submission includes reads tagged with the sequence TCAGGAGG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS017059" refname="Schisto_MLV_insertion_site_sequencing-sc-2010-11-05-1004917" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS017059</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schisto_MLV_insertion_site_sequencing-sc-2010-11-05-1004917</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>1392943</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="71"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Custom</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>161</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina Genome Analyzer II</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_5470_8#40" center_name="SC" accession="ERX064318"> <IDENTIFIERS> <PRIMARY_ID>ERX064318</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_5470_8#40</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000379" refname="Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000379</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 1392947, constructed from sample accession ERS017055 for study accession ERP000379. This is part of an Illumina multiplexed sequencing run (5470_8). This submission includes reads tagged with the sequence TAAGTTCG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS017055" refname="Schisto_MLV_insertion_site_sequencing-sc-2010-11-05-1004921" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS017055</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schisto_MLV_insertion_site_sequencing-sc-2010-11-05-1004921</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>1392947</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="71"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Custom</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>161</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina Genome Analyzer II</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_5470_8#41" center_name="SC" accession="ERX064319"> <IDENTIFIERS> <PRIMARY_ID>ERX064319</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_5470_8#41</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000379" refname="Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000379</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 1392951, constructed from sample accession ERS017051 for study accession ERP000379. This is part of an Illumina multiplexed sequencing run (5470_8). This submission includes reads tagged with the sequence TCCAGTCG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS017051" refname="Schisto_MLV_insertion_site_sequencing-sc-2010-11-05-1004925" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS017051</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schisto_MLV_insertion_site_sequencing-sc-2010-11-05-1004925</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>1392951</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="71"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Custom</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>161</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina Genome Analyzer II</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_5470_8#42" center_name="SC" accession="ERX064320"> <IDENTIFIERS> <PRIMARY_ID>ERX064320</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_5470_8#42</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000379" refname="Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000379</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 1392946, constructed from sample accession ERS017056 for study accession ERP000379. This is part of an Illumina multiplexed sequencing run (5470_8). This submission includes reads tagged with the sequence TGTATGCG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS017056" refname="Schisto_MLV_insertion_site_sequencing-sc-2010-11-05-1004920" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS017056</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schisto_MLV_insertion_site_sequencing-sc-2010-11-05-1004920</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>1392946</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="71"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Custom</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>161</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina Genome Analyzer II</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_6162_3#1" center_name="SC" accession="ERX064321"> <IDENTIFIERS> <PRIMARY_ID>ERX064321</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_6162_3#1</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000379" refname="Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000379</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 2496227, constructed from sample accession ERS027416 for study accession ERP000379. This is part of an Illumina multiplexed sequencing run (6162_3). This submission includes reads tagged with the sequence TAGCTTG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS027416" refname="Schistosoma_mansoni-sc-2011-04-06T17:42:02Z-1118403" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS027416</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schistosoma_mansoni-sc-2011-04-06T17:42:02Z-1118403</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>2496227</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="230" NOMINAL_SDEV="62"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Custom</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>161</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina Genome Analyzer II</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_6162_3#2" center_name="SC" accession="ERX064322"> <IDENTIFIERS> <PRIMARY_ID>ERX064322</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_6162_3#2</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000379" refname="Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000379</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 2496228, constructed from sample accession ERS031401 for study accession ERP000379. This is part of an Illumina multiplexed sequencing run (6162_3). This submission includes reads tagged with the sequence CGATGTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS031401" refname="Schistosoma_mansoni-sc-2011-04-18T19:40:26Z-1124990" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS031401</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schistosoma_mansoni-sc-2011-04-18T19:40:26Z-1124990</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>2496228</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="230" NOMINAL_SDEV="62"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Custom</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>161</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina Genome Analyzer II</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_6162_3#5" center_name="SC" accession="ERX064323"> <IDENTIFIERS> <PRIMARY_ID>ERX064323</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_6162_3#5</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000379" refname="Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000379</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schistosoma_mansoni_pLNHX_SmACT_Luc_sequencing-sc-2010-10-29</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 2496229, constructed from sample accession ERS031400 for study accession ERP000379. This is part of an Illumina multiplexed sequencing run (6162_3). This submission includes reads tagged with the sequence ATCACGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS031400" refname="Schistosoma_mansoni-sc-2011-04-18T19:38:11Z-1124991" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS031400</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Schistosoma_mansoni-sc-2011-04-18T19:38:11Z-1124991</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>2496229</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="230" NOMINAL_SDEV="62"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Custom</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>161</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina Genome Analyzer II</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> </EXPERIMENT_SET>