ERX085119 SC_EXP_7418_7#2 <STUDY_REF accession="ERP000900" refname="Mouse_Cancer_Exome_Analysis-sc-2011-09-14T16:26:41Z-1954" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000900</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Mouse_Cancer_Exome_Analysis-sc-2011-09-14T16:26:41Z-1954</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4078842, constructed from sample accession ERS074680 for study accession ERP000900. This is part of an Illumina multiplexed sequencing run (7418_7). This submission includes reads tagged with the sequence CGATGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS074680" refname="MD0120h-sc-2011-11-22T16:51:08Z-1307123" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS074680</PRIMARY_ID> <SUBMITTER_ID namespace="SC">MD0120h-sc-2011-11-22T16:51:08Z-1307123</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4078842</LIBRARY_NAME> <LIBRARY_STRATEGY>WXS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>Hybrid Selection</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="164" NOMINAL_SDEV="44"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Agilent Pulldown</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>158</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7418_7#3" center_name="SC" accession="ERX085120"> <IDENTIFIERS> <PRIMARY_ID>ERX085120</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7418_7#3</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000900" refname="Mouse_Cancer_Exome_Analysis-sc-2011-09-14T16:26:41Z-1954" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000900</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Mouse_Cancer_Exome_Analysis-sc-2011-09-14T16:26:41Z-1954</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4078843, constructed from sample accession ERS074681 for study accession ERP000900. This is part of an Illumina multiplexed sequencing run (7418_7). This submission includes reads tagged with the sequence TTAGGC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS074681" refname="MD0120l-sc-2011-11-22T16:51:10Z-1307124" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS074681</PRIMARY_ID> <SUBMITTER_ID namespace="SC">MD0120l-sc-2011-11-22T16:51:10Z-1307124</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4078843</LIBRARY_NAME> <LIBRARY_STRATEGY>WXS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>Hybrid Selection</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="164" NOMINAL_SDEV="44"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Agilent Pulldown</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>158</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7418_7#4" center_name="SC" accession="ERX085121"> <IDENTIFIERS> <PRIMARY_ID>ERX085121</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7418_7#4</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000900" refname="Mouse_Cancer_Exome_Analysis-sc-2011-09-14T16:26:41Z-1954" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000900</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Mouse_Cancer_Exome_Analysis-sc-2011-09-14T16:26:41Z-1954</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4078844, constructed from sample accession ERS074682 for study accession ERP000900. This is part of an Illumina multiplexed sequencing run (7418_7). This submission includes reads tagged with the sequence TGACCA.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS074682" refname="MD0120r-sc-2011-11-22T16:51:12Z-1307125" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS074682</PRIMARY_ID> <SUBMITTER_ID namespace="SC">MD0120r-sc-2011-11-22T16:51:12Z-1307125</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4078844</LIBRARY_NAME> <LIBRARY_STRATEGY>WXS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>Hybrid Selection</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="164" NOMINAL_SDEV="44"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Agilent Pulldown</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>158</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7418_8#5" center_name="SC" accession="ERX085122"> <IDENTIFIERS> <PRIMARY_ID>ERX085122</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7418_8#5</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000900" refname="Mouse_Cancer_Exome_Analysis-sc-2011-09-14T16:26:41Z-1954" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000900</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Mouse_Cancer_Exome_Analysis-sc-2011-09-14T16:26:41Z-1954</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4078847, constructed from sample accession ERS074683 for study accession ERP000900. This is part of an Illumina multiplexed sequencing run (7418_8). This submission includes reads tagged with the sequence ACAGTG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS074683" refname="MD0120t-sc-2011-11-22T16:51:13Z-1307126" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS074683</PRIMARY_ID> <SUBMITTER_ID namespace="SC">MD0120t-sc-2011-11-22T16:51:13Z-1307126</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4078847</LIBRARY_NAME> <LIBRARY_STRATEGY>WXS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>Hybrid Selection</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="172" NOMINAL_SDEV="47"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Agilent Pulldown</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>158</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7418_8#6" center_name="SC" accession="ERX085123"> <IDENTIFIERS> <PRIMARY_ID>ERX085123</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7418_8#6</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP000900" refname="Mouse_Cancer_Exome_Analysis-sc-2011-09-14T16:26:41Z-1954" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP000900</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Mouse_Cancer_Exome_Analysis-sc-2011-09-14T16:26:41Z-1954</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4078848, constructed from sample accession ERS074684 for study accession ERP000900. This is part of an Illumina multiplexed sequencing run (7418_8). This submission includes reads tagged with the sequence GCCAAT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS074684" refname="MD0121b-sc-2011-11-22T16:51:14Z-1307127" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS074684</PRIMARY_ID> <SUBMITTER_ID namespace="SC">MD0121b-sc-2011-11-22T16:51:14Z-1307127</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4078848</LIBRARY_NAME> <LIBRARY_STRATEGY>WXS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>Hybrid Selection</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="172" NOMINAL_SDEV="47"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Agilent Pulldown</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>158</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> </EXPERIMENT_SET>