ERX087779 SC_EXP_7450_1#25 <STUDY_REF accession="ERP001016" refname="Population_Genomic_Study_of_Oryzias_latipes__Medaka_Fish-sc-2011-11-17T10:30:05Z-2037" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001016</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Population_Genomic_Study_of_Oryzias_latipes__Medaka_Fish-sc-2011-11-17T10:30:05Z-2037</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4300772, constructed from sample accession ERS074166 for study accession ERP001016. This is part of an Illumina multiplexed sequencing run (7450_1). This submission includes reads tagged with the sequence TGCGATCT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS074166" refname="M8T_2_F-sc-2011-11-17T09:06:18Z-1305502" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS074166</PRIMARY_ID> <SUBMITTER_ID namespace="SC">M8T_2_F-sc-2011-11-17T09:06:18Z-1305502</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4300772</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="491" NOMINAL_SDEV="146"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>208</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7450_1#26" center_name="SC" accession="ERX087780"> <IDENTIFIERS> <PRIMARY_ID>ERX087780</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7450_1#26</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001016" refname="Population_Genomic_Study_of_Oryzias_latipes__Medaka_Fish-sc-2011-11-17T10:30:05Z-2037" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001016</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Population_Genomic_Study_of_Oryzias_latipes__Medaka_Fish-sc-2011-11-17T10:30:05Z-2037</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4300773, constructed from sample accession ERS074167 for study accession ERP001016. This is part of an Illumina multiplexed sequencing run (7450_1). This submission includes reads tagged with the sequence TTCCTGCT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS074167" refname="M8T_2_M-sc-2011-11-17T09:06:19Z-1305503" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS074167</PRIMARY_ID> <SUBMITTER_ID namespace="SC">M8T_2_M-sc-2011-11-17T09:06:19Z-1305503</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4300773</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="491" NOMINAL_SDEV="146"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>208</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7450_1#27" center_name="SC" accession="ERX087781"> <IDENTIFIERS> <PRIMARY_ID>ERX087781</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7450_1#27</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001016" refname="Population_Genomic_Study_of_Oryzias_latipes__Medaka_Fish-sc-2011-11-17T10:30:05Z-2037" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001016</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Population_Genomic_Study_of_Oryzias_latipes__Medaka_Fish-sc-2011-11-17T10:30:05Z-2037</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4300774, constructed from sample accession ERS074168 for study accession ERP001016. This is part of an Illumina multiplexed sequencing run (7450_1). This submission includes reads tagged with the sequence TAGTGACT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS074168" refname="M8T_2_C-sc-2011-11-17T09:06:20Z-1305504" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS074168</PRIMARY_ID> <SUBMITTER_ID namespace="SC">M8T_2_C-sc-2011-11-17T09:06:20Z-1305504</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4300774</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="491" NOMINAL_SDEV="146"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>208</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7450_2#28" center_name="SC" accession="ERX087782"> <IDENTIFIERS> <PRIMARY_ID>ERX087782</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7450_2#28</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001016" refname="Population_Genomic_Study_of_Oryzias_latipes__Medaka_Fish-sc-2011-11-17T10:30:05Z-2037" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001016</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Population_Genomic_Study_of_Oryzias_latipes__Medaka_Fish-sc-2011-11-17T10:30:05Z-2037</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4300775, constructed from sample accession ERS074169 for study accession ERP001016. This is part of an Illumina multiplexed sequencing run (7450_2). This submission includes reads tagged with the sequence TACAGGAT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS074169" refname="M8T_9_F-sc-2011-11-17T09:06:21Z-1305505" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS074169</PRIMARY_ID> <SUBMITTER_ID namespace="SC">M8T_9_F-sc-2011-11-17T09:06:21Z-1305505</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4300775</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="497" NOMINAL_SDEV="151"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>208</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7450_2#29" center_name="SC" accession="ERX087783"> <IDENTIFIERS> <PRIMARY_ID>ERX087783</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7450_2#29</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001016" refname="Population_Genomic_Study_of_Oryzias_latipes__Medaka_Fish-sc-2011-11-17T10:30:05Z-2037" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001016</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Population_Genomic_Study_of_Oryzias_latipes__Medaka_Fish-sc-2011-11-17T10:30:05Z-2037</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4300776, constructed from sample accession ERS074170 for study accession ERP001016. This is part of an Illumina multiplexed sequencing run (7450_2). This submission includes reads tagged with the sequence TCCTCAAT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS074170" refname="M8T_9_M-sc-2011-11-17T09:06:22Z-1305506" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS074170</PRIMARY_ID> <SUBMITTER_ID namespace="SC">M8T_9_M-sc-2011-11-17T09:06:22Z-1305506</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4300776</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="497" NOMINAL_SDEV="151"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>208</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7450_2#30" center_name="SC" accession="ERX087784"> <IDENTIFIERS> <PRIMARY_ID>ERX087784</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7450_2#30</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001016" refname="Population_Genomic_Study_of_Oryzias_latipes__Medaka_Fish-sc-2011-11-17T10:30:05Z-2037" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001016</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Population_Genomic_Study_of_Oryzias_latipes__Medaka_Fish-sc-2011-11-17T10:30:05Z-2037</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4300777, constructed from sample accession ERS074171 for study accession ERP001016. This is part of an Illumina multiplexed sequencing run (7450_2). This submission includes reads tagged with the sequence TGTGGTTG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS074171" refname="M8T_9_C-sc-2011-11-17T09:06:22Z-1305507" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS074171</PRIMARY_ID> <SUBMITTER_ID namespace="SC">M8T_9_C-sc-2011-11-17T09:06:22Z-1305507</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4300777</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="497" NOMINAL_SDEV="151"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>208</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7450_3#31" center_name="SC" accession="ERX087785"> <IDENTIFIERS> <PRIMARY_ID>ERX087785</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7450_3#31</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001016" refname="Population_Genomic_Study_of_Oryzias_latipes__Medaka_Fish-sc-2011-11-17T10:30:05Z-2037" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001016</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Population_Genomic_Study_of_Oryzias_latipes__Medaka_Fish-sc-2011-11-17T10:30:05Z-2037</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4300778, constructed from sample accession ERS074172 for study accession ERP001016. This is part of an Illumina multiplexed sequencing run (7450_3). This submission includes reads tagged with the sequence TAGTCTTG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS074172" refname="M8T_16_F-sc-2011-11-17T09:06:23Z-1305508" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS074172</PRIMARY_ID> <SUBMITTER_ID namespace="SC">M8T_16_F-sc-2011-11-17T09:06:23Z-1305508</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4300778</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="496" NOMINAL_SDEV="148"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>208</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7450_3#32" center_name="SC" accession="ERX087786"> <IDENTIFIERS> <PRIMARY_ID>ERX087786</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7450_3#32</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001016" refname="Population_Genomic_Study_of_Oryzias_latipes__Medaka_Fish-sc-2011-11-17T10:30:05Z-2037" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001016</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Population_Genomic_Study_of_Oryzias_latipes__Medaka_Fish-sc-2011-11-17T10:30:05Z-2037</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4300779, constructed from sample accession ERS074173 for study accession ERP001016. This is part of an Illumina multiplexed sequencing run (7450_3). This submission includes reads tagged with the sequence TTCCATTG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS074173" refname="M8T_16_M-sc-2011-11-17T09:06:24Z-1305509" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS074173</PRIMARY_ID> <SUBMITTER_ID namespace="SC">M8T_16_M-sc-2011-11-17T09:06:24Z-1305509</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4300779</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="496" NOMINAL_SDEV="148"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>208</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7450_3#33" center_name="SC" accession="ERX087787"> <IDENTIFIERS> <PRIMARY_ID>ERX087787</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7450_3#33</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001016" refname="Population_Genomic_Study_of_Oryzias_latipes__Medaka_Fish-sc-2011-11-17T10:30:05Z-2037" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001016</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Population_Genomic_Study_of_Oryzias_latipes__Medaka_Fish-sc-2011-11-17T10:30:05Z-2037</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4300780, constructed from sample accession ERS074174 for study accession ERP001016. This is part of an Illumina multiplexed sequencing run (7450_3). This submission includes reads tagged with the sequence TCGAAGTG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS074174" refname="M8T_16_C-sc-2011-11-17T09:06:25Z-1305510" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS074174</PRIMARY_ID> <SUBMITTER_ID namespace="SC">M8T_16_C-sc-2011-11-17T09:06:25Z-1305510</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4300780</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="496" NOMINAL_SDEV="148"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>208</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7450_4#37" center_name="SC" accession="ERX087788"> <IDENTIFIERS> <PRIMARY_ID>ERX087788</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7450_4#37</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001016" refname="Population_Genomic_Study_of_Oryzias_latipes__Medaka_Fish-sc-2011-11-17T10:30:05Z-2037" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001016</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Population_Genomic_Study_of_Oryzias_latipes__Medaka_Fish-sc-2011-11-17T10:30:05Z-2037</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4297857, constructed from sample accession ERS074178 for study accession ERP001016. This is part of an Illumina multiplexed sequencing run (7450_4). This submission includes reads tagged with the sequence TACTTCGG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS074178" refname="M8T_25_F-sc-2011-11-17T09:06:28Z-1305514" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS074178</PRIMARY_ID> <SUBMITTER_ID namespace="SC">M8T_25_F-sc-2011-11-17T09:06:28Z-1305514</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4297857</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="460" NOMINAL_SDEV="136"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>208</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7450_4#38" center_name="SC" accession="ERX087789"> <IDENTIFIERS> <PRIMARY_ID>ERX087789</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7450_4#38</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001016" refname="Population_Genomic_Study_of_Oryzias_latipes__Medaka_Fish-sc-2011-11-17T10:30:05Z-2037" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001016</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Population_Genomic_Study_of_Oryzias_latipes__Medaka_Fish-sc-2011-11-17T10:30:05Z-2037</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4297858, constructed from sample accession ERS074179 for study accession ERP001016. This is part of an Illumina multiplexed sequencing run (7450_4). This submission includes reads tagged with the sequence TCTCACGG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS074179" refname="M8T_25_M-sc-2011-11-17T09:06:29Z-1305515" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS074179</PRIMARY_ID> <SUBMITTER_ID namespace="SC">M8T_25_M-sc-2011-11-17T09:06:29Z-1305515</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4297858</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="460" NOMINAL_SDEV="136"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>208</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7450_4#39" center_name="SC" accession="ERX087790"> <IDENTIFIERS> <PRIMARY_ID>ERX087790</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7450_4#39</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001016" refname="Population_Genomic_Study_of_Oryzias_latipes__Medaka_Fish-sc-2011-11-17T10:30:05Z-2037" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001016</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Population_Genomic_Study_of_Oryzias_latipes__Medaka_Fish-sc-2011-11-17T10:30:05Z-2037</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4297859, constructed from sample accession ERS074180 for study accession ERP001016. This is part of an Illumina multiplexed sequencing run (7450_4). This submission includes reads tagged with the sequence TCAGGAGG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS074180" refname="M8T_25_C-sc-2011-11-17T09:06:29Z-1305516" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS074180</PRIMARY_ID> <SUBMITTER_ID namespace="SC">M8T_25_C-sc-2011-11-17T09:06:29Z-1305516</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4297859</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="460" NOMINAL_SDEV="136"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>208</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7450_5#40" center_name="SC" accession="ERX087791"> <IDENTIFIERS> <PRIMARY_ID>ERX087791</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7450_5#40</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001016" refname="Population_Genomic_Study_of_Oryzias_latipes__Medaka_Fish-sc-2011-11-17T10:30:05Z-2037" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001016</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Population_Genomic_Study_of_Oryzias_latipes__Medaka_Fish-sc-2011-11-17T10:30:05Z-2037</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4297860, constructed from sample accession ERS074181 for study accession ERP001016. This is part of an Illumina multiplexed sequencing run (7450_5). This submission includes reads tagged with the sequence TAAGTTCG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS074181" refname="M8T_28_F-sc-2011-11-17T09:06:30Z-1305517" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS074181</PRIMARY_ID> <SUBMITTER_ID namespace="SC">M8T_28_F-sc-2011-11-17T09:06:30Z-1305517</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4297860</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="451" NOMINAL_SDEV="133"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>208</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7450_5#41" center_name="SC" accession="ERX087792"> <IDENTIFIERS> <PRIMARY_ID>ERX087792</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7450_5#41</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001016" refname="Population_Genomic_Study_of_Oryzias_latipes__Medaka_Fish-sc-2011-11-17T10:30:05Z-2037" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001016</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Population_Genomic_Study_of_Oryzias_latipes__Medaka_Fish-sc-2011-11-17T10:30:05Z-2037</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4297861, constructed from sample accession ERS074182 for study accession ERP001016. This is part of an Illumina multiplexed sequencing run (7450_5). This submission includes reads tagged with the sequence TCCAGTCG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS074182" refname="M8T_28_M-sc-2011-11-17T09:06:30Z-1305518" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS074182</PRIMARY_ID> <SUBMITTER_ID namespace="SC">M8T_28_M-sc-2011-11-17T09:06:30Z-1305518</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4297861</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="451" NOMINAL_SDEV="133"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>208</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7450_5#42" center_name="SC" accession="ERX087793"> <IDENTIFIERS> <PRIMARY_ID>ERX087793</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7450_5#42</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001016" refname="Population_Genomic_Study_of_Oryzias_latipes__Medaka_Fish-sc-2011-11-17T10:30:05Z-2037" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001016</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Population_Genomic_Study_of_Oryzias_latipes__Medaka_Fish-sc-2011-11-17T10:30:05Z-2037</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4297862, constructed from sample accession ERS074183 for study accession ERP001016. This is part of an Illumina multiplexed sequencing run (7450_5). This submission includes reads tagged with the sequence TGTATGCG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS074183" refname="M8T_28_C-sc-2011-11-17T09:06:31Z-1305519" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS074183</PRIMARY_ID> <SUBMITTER_ID namespace="SC">M8T_28_C-sc-2011-11-17T09:06:31Z-1305519</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4297862</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="451" NOMINAL_SDEV="133"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>208</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7450_6#43" center_name="SC" accession="ERX087794"> <IDENTIFIERS> <PRIMARY_ID>ERX087794</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7450_6#43</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001016" refname="Population_Genomic_Study_of_Oryzias_latipes__Medaka_Fish-sc-2011-11-17T10:30:05Z-2037" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001016</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Population_Genomic_Study_of_Oryzias_latipes__Medaka_Fish-sc-2011-11-17T10:30:05Z-2037</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4297866, constructed from sample accession ERS074184 for study accession ERP001016. This is part of an Illumina multiplexed sequencing run (7450_6). This submission includes reads tagged with the sequence TCATTGAG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS074184" refname="M8T_30_F-sc-2011-11-17T09:06:32Z-1305520" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS074184</PRIMARY_ID> <SUBMITTER_ID namespace="SC">M8T_30_F-sc-2011-11-17T09:06:32Z-1305520</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4297866</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="458" NOMINAL_SDEV="145"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>208</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7450_6#44" center_name="SC" accession="ERX087795"> <IDENTIFIERS> <PRIMARY_ID>ERX087795</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7450_6#44</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001016" refname="Population_Genomic_Study_of_Oryzias_latipes__Medaka_Fish-sc-2011-11-17T10:30:05Z-2037" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001016</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Population_Genomic_Study_of_Oryzias_latipes__Medaka_Fish-sc-2011-11-17T10:30:05Z-2037</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4297867, constructed from sample accession ERS074185 for study accession ERP001016. This is part of an Illumina multiplexed sequencing run (7450_6). This submission includes reads tagged with the sequence TGGCTCAG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS074185" refname="M8T_30_M-sc-2011-11-17T09:06:33Z-1305521" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS074185</PRIMARY_ID> <SUBMITTER_ID namespace="SC">M8T_30_M-sc-2011-11-17T09:06:33Z-1305521</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4297867</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="458" NOMINAL_SDEV="145"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>208</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7450_6#45" center_name="SC" accession="ERX087796"> <IDENTIFIERS> <PRIMARY_ID>ERX087796</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7450_6#45</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001016" refname="Population_Genomic_Study_of_Oryzias_latipes__Medaka_Fish-sc-2011-11-17T10:30:05Z-2037" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001016</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Population_Genomic_Study_of_Oryzias_latipes__Medaka_Fish-sc-2011-11-17T10:30:05Z-2037</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4297868, constructed from sample accession ERS074186 for study accession ERP001016. This is part of an Illumina multiplexed sequencing run (7450_6). This submission includes reads tagged with the sequence TATGCCAG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS074186" refname="M8T_30_C-sc-2011-11-17T09:06:33Z-1305522" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS074186</PRIMARY_ID> <SUBMITTER_ID namespace="SC">M8T_30_C-sc-2011-11-17T09:06:33Z-1305522</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4297868</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="458" NOMINAL_SDEV="145"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>208</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7450_7#34" center_name="SC" accession="ERX087797"> <IDENTIFIERS> <PRIMARY_ID>ERX087797</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7450_7#34</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001016" refname="Population_Genomic_Study_of_Oryzias_latipes__Medaka_Fish-sc-2011-11-17T10:30:05Z-2037" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001016</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Population_Genomic_Study_of_Oryzias_latipes__Medaka_Fish-sc-2011-11-17T10:30:05Z-2037</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4300781, constructed from sample accession ERS074175 for study accession ERP001016. This is part of an Illumina multiplexed sequencing run (7450_7). This submission includes reads tagged with the sequence TAACGCTG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS074175" refname="M8T_20_F-sc-2011-11-17T09:06:26Z-1305511" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS074175</PRIMARY_ID> <SUBMITTER_ID namespace="SC">M8T_20_F-sc-2011-11-17T09:06:26Z-1305511</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4300781</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="492" NOMINAL_SDEV="149"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>208</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7450_7#35" center_name="SC" accession="ERX087798"> <IDENTIFIERS> <PRIMARY_ID>ERX087798</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7450_7#35</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001016" refname="Population_Genomic_Study_of_Oryzias_latipes__Medaka_Fish-sc-2011-11-17T10:30:05Z-2037" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001016</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Population_Genomic_Study_of_Oryzias_latipes__Medaka_Fish-sc-2011-11-17T10:30:05Z-2037</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4300782, constructed from sample accession ERS074176 for study accession ERP001016. This is part of an Illumina multiplexed sequencing run (7450_7). This submission includes reads tagged with the sequence TTGGTATG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS074176" refname="M8T_20_M-sc-2011-11-17T09:06:27Z-1305512" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS074176</PRIMARY_ID> <SUBMITTER_ID namespace="SC">M8T_20_M-sc-2011-11-17T09:06:27Z-1305512</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4300782</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="492" NOMINAL_SDEV="149"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>208</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7450_7#36" center_name="SC" accession="ERX087799"> <IDENTIFIERS> <PRIMARY_ID>ERX087799</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7450_7#36</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001016" refname="Population_Genomic_Study_of_Oryzias_latipes__Medaka_Fish-sc-2011-11-17T10:30:05Z-2037" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001016</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Population_Genomic_Study_of_Oryzias_latipes__Medaka_Fish-sc-2011-11-17T10:30:05Z-2037</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4300783, constructed from sample accession ERS074177 for study accession ERP001016. This is part of an Illumina multiplexed sequencing run (7450_7). This submission includes reads tagged with the sequence TGAACTGG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS074177" refname="M8T_20_C-sc-2011-11-17T09:06:28Z-1305513" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS074177</PRIMARY_ID> <SUBMITTER_ID namespace="SC">M8T_20_C-sc-2011-11-17T09:06:28Z-1305513</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4300783</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="492" NOMINAL_SDEV="149"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>208</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7450_8#46" center_name="SC" accession="ERX087800"> <IDENTIFIERS> <PRIMARY_ID>ERX087800</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7450_8#46</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001016" refname="Population_Genomic_Study_of_Oryzias_latipes__Medaka_Fish-sc-2011-11-17T10:30:05Z-2037" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001016</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Population_Genomic_Study_of_Oryzias_latipes__Medaka_Fish-sc-2011-11-17T10:30:05Z-2037</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4297869, constructed from sample accession ERS074187 for study accession ERP001016. This is part of an Illumina multiplexed sequencing run (7450_8). This submission includes reads tagged with the sequence TCAGATTC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS074187" refname="M8T_32_F-sc-2011-11-17T09:06:34Z-1305523" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS074187</PRIMARY_ID> <SUBMITTER_ID namespace="SC">M8T_32_F-sc-2011-11-17T09:06:34Z-1305523</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4297869</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="460" NOMINAL_SDEV="142"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>208</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7450_8#47" center_name="SC" accession="ERX087801"> <IDENTIFIERS> <PRIMARY_ID>ERX087801</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7450_8#47</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001016" refname="Population_Genomic_Study_of_Oryzias_latipes__Medaka_Fish-sc-2011-11-17T10:30:05Z-2037" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001016</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Population_Genomic_Study_of_Oryzias_latipes__Medaka_Fish-sc-2011-11-17T10:30:05Z-2037</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4297870, constructed from sample accession ERS074188 for study accession ERP001016. This is part of an Illumina multiplexed sequencing run (7450_8). This submission includes reads tagged with the sequence TACTAGTC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS074188" refname="M8T_32_M-sc-2011-11-17T09:06:34Z-1305524" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS074188</PRIMARY_ID> <SUBMITTER_ID namespace="SC">M8T_32_M-sc-2011-11-17T09:06:34Z-1305524</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4297870</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="460" NOMINAL_SDEV="142"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>208</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7450_8#48" center_name="SC" accession="ERX087802"> <IDENTIFIERS> <PRIMARY_ID>ERX087802</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7450_8#48</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001016" refname="Population_Genomic_Study_of_Oryzias_latipes__Medaka_Fish-sc-2011-11-17T10:30:05Z-2037" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001016</PRIMARY_ID> <SUBMITTER_ID namespace="SC">Population_Genomic_Study_of_Oryzias_latipes__Medaka_Fish-sc-2011-11-17T10:30:05Z-2037</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4297871, constructed from sample accession ERS074189 for study accession ERP001016. This is part of an Illumina multiplexed sequencing run (7450_8). This submission includes reads tagged with the sequence TTCAGCTC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS074189" refname="M8T_32_C-sc-2011-11-17T09:06:35Z-1305525" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS074189</PRIMARY_ID> <SUBMITTER_ID namespace="SC">M8T_32_C-sc-2011-11-17T09:06:35Z-1305525</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4297871</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="460" NOMINAL_SDEV="142"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>208</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <RELATIVE_ORDER follows_read_index="0"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> </EXPERIMENT_SET>