<STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609078, constructed from sample accession ERS103994 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TGGCTCAG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103994" refname="2042STDY5252765-sc-2012-03-13T13:23:28Z-1310138" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103994</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252765-sc-2012-03-13T13:23:28Z-1310138</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609078</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#45" center_name="SC" accession="ERX113654"> <IDENTIFIERS> <PRIMARY_ID>ERX113654</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#45</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609066, constructed from sample accession ERS103995 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TATGCCAG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103995" refname="2042STDY5252766-sc-2012-03-13T13:23:28Z-1310139" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103995</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252766-sc-2012-03-13T13:23:28Z-1310139</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609066</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#46" center_name="SC" accession="ERX113655"> <IDENTIFIERS> <PRIMARY_ID>ERX113655</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#46</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609054, constructed from sample accession ERS103996 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TCAGATTC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103996" refname="2042STDY5252767-sc-2012-03-13T13:23:29Z-1310140" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103996</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252767-sc-2012-03-13T13:23:29Z-1310140</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609054</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#47" center_name="SC" accession="ERX113656"> <IDENTIFIERS> <PRIMARY_ID>ERX113656</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#47</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609042, constructed from sample accession ERS103997 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TACTAGTC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103997" refname="2042STDY5252768-sc-2012-03-13T13:23:30Z-1310141" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103997</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252768-sc-2012-03-13T13:23:30Z-1310141</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609042</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#48" center_name="SC" accession="ERX113657"> <IDENTIFIERS> <PRIMARY_ID>ERX113657</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#48</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609030, constructed from sample accession ERS103913 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TTCAGCTC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103913" refname="2042STDY5252794-sc-2012-03-13T13:22:20Z-1310057" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103913</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252794-sc-2012-03-13T13:22:20Z-1310057</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609030</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#49" center_name="SC" accession="ERX113658"> <IDENTIFIERS> <PRIMARY_ID>ERX113658</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#49</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609113, constructed from sample accession ERS103914 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TGTCTATC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103914" refname="2042STDY5252795-sc-2012-03-13T13:22:20Z-1310058" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103914</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252795-sc-2012-03-13T13:22:20Z-1310058</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609113</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#50" center_name="SC" accession="ERX113659"> <IDENTIFIERS> <PRIMARY_ID>ERX113659</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#50</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609101, constructed from sample accession ERS103915 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TATGTGGC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103915" refname="2042STDY5252796-sc-2012-03-13T13:22:21Z-1310059" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103915</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252796-sc-2012-03-13T13:22:21Z-1310059</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609101</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#51" center_name="SC" accession="ERX113660"> <IDENTIFIERS> <PRIMARY_ID>ERX113660</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#51</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609089, constructed from sample accession ERS103916 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TTACTCGC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103916" refname="2042STDY5252797-sc-2012-03-13T13:22:22Z-1310060" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103916</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252797-sc-2012-03-13T13:22:22Z-1310060</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609089</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#52" center_name="SC" accession="ERX113661"> <IDENTIFIERS> <PRIMARY_ID>ERX113661</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#52</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609077, constructed from sample accession ERS103917 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TCGTTAGC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103917" refname="2042STDY5252798-sc-2012-03-13T13:22:22Z-1310061" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103917</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252798-sc-2012-03-13T13:22:22Z-1310061</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609077</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#53" center_name="SC" accession="ERX113662"> <IDENTIFIERS> <PRIMARY_ID>ERX113662</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#53</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609065, constructed from sample accession ERS103920 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TACCGAGC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103920" refname="2042STDY5252799-sc-2012-03-13T13:22:25Z-1310064" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103920</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252799-sc-2012-03-13T13:22:25Z-1310064</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609065</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#54" center_name="SC" accession="ERX113663"> <IDENTIFIERS> <PRIMARY_ID>ERX113663</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#54</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609053, constructed from sample accession ERS103921 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TGTTCTCC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103921" refname="2042STDY5252800-sc-2012-03-13T13:22:26Z-1310065" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103921</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252800-sc-2012-03-13T13:22:26Z-1310065</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609053</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#55" center_name="SC" accession="ERX113664"> <IDENTIFIERS> <PRIMARY_ID>ERX113664</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#55</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609041, constructed from sample accession ERS103927 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TTCGCACC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103927" refname="2042STDY5252801-sc-2012-03-13T13:22:31Z-1310071" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103927</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252801-sc-2012-03-13T13:22:31Z-1310071</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609041</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#56" center_name="SC" accession="ERX113665"> <IDENTIFIERS> <PRIMARY_ID>ERX113665</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#56</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609029, constructed from sample accession ERS103928 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TTGCGTAC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103928" refname="2042STDY5252802-sc-2012-03-13T13:22:32Z-1310072" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103928</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252802-sc-2012-03-13T13:22:32Z-1310072</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609029</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#57" center_name="SC" accession="ERX113666"> <IDENTIFIERS> <PRIMARY_ID>ERX113666</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#57</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609112, constructed from sample accession ERS103929 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TCTACGAC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103929" refname="2042STDY5252803-sc-2012-03-13T13:22:32Z-1310073" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103929</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252803-sc-2012-03-13T13:22:32Z-1310073</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609112</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#58" center_name="SC" accession="ERX113667"> <IDENTIFIERS> <PRIMARY_ID>ERX113667</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#58</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609100, constructed from sample accession ERS103930 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TGACAGAC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103930" refname="2042STDY5252804-sc-2012-03-13T13:22:33Z-1310074" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103930</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252804-sc-2012-03-13T13:22:33Z-1310074</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609100</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#1" center_name="SC" accession="ERX113515"> <IDENTIFIERS> <PRIMARY_ID>ERX113515</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#1</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589546, constructed from sample accession ERS103815 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence ATCACGTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103815" refname="2042STDY5252554-sc-2012-03-13T13:20:52Z-1309911" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103815</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252554-sc-2012-03-13T13:20:52Z-1309911</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589546</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#2" center_name="SC" accession="ERX113516"> <IDENTIFIERS> <PRIMARY_ID>ERX113516</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#2</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589534, constructed from sample accession ERS103816 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence CGATGTTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103816" refname="2042STDY5252555-sc-2012-03-13T13:20:53Z-1309912" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103816</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252555-sc-2012-03-13T13:20:53Z-1309912</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589534</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#3" center_name="SC" accession="ERX113517"> <IDENTIFIERS> <PRIMARY_ID>ERX113517</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#3</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589522, constructed from sample accession ERS103817 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TTAGGCAT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103817" refname="2042STDY5252556-sc-2012-03-13T13:20:54Z-1309914" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103817</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252556-sc-2012-03-13T13:20:54Z-1309914</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589522</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#4" center_name="SC" accession="ERX113518"> <IDENTIFIERS> <PRIMARY_ID>ERX113518</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#4</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589510, constructed from sample accession ERS103818 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TGACCACT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103818" refname="2042STDY5252557-sc-2012-03-13T13:20:55Z-1309916" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103818</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252557-sc-2012-03-13T13:20:55Z-1309916</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589510</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#5" center_name="SC" accession="ERX113519"> <IDENTIFIERS> <PRIMARY_ID>ERX113519</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#5</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589498, constructed from sample accession ERS103819 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence ACAGTGGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103819" refname="2042STDY5252558-sc-2012-03-13T13:20:56Z-1309918" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103819</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252558-sc-2012-03-13T13:20:56Z-1309918</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589498</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#6" center_name="SC" accession="ERX113520"> <IDENTIFIERS> <PRIMARY_ID>ERX113520</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#6</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589486, constructed from sample accession ERS103820 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence GCCAATGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103820" refname="2042STDY5252559-sc-2012-03-13T13:20:57Z-1309920" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103820</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252559-sc-2012-03-13T13:20:57Z-1309920</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589486</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#7" center_name="SC" accession="ERX113521"> <IDENTIFIERS> <PRIMARY_ID>ERX113521</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#7</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589474, constructed from sample accession ERS103821 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence CAGATCTG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103821" refname="2042STDY5252560-sc-2012-03-13T13:20:57Z-1309922" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103821</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252560-sc-2012-03-13T13:20:57Z-1309922</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589474</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#8" center_name="SC" accession="ERX113522"> <IDENTIFIERS> <PRIMARY_ID>ERX113522</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#8</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589462, constructed from sample accession ERS103822 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence ACTTGATG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103822" refname="2042STDY5252561-sc-2012-03-13T13:20:59Z-1309924" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103822</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252561-sc-2012-03-13T13:20:59Z-1309924</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589462</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#9" center_name="SC" accession="ERX113523"> <IDENTIFIERS> <PRIMARY_ID>ERX113523</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#9</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589545, constructed from sample accession ERS103823 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence GATCAGCG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103823" refname="2042STDY5252562-sc-2012-03-13T13:20:59Z-1309926" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103823</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252562-sc-2012-03-13T13:20:59Z-1309926</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589545</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#10" center_name="SC" accession="ERX113524"> <IDENTIFIERS> <PRIMARY_ID>ERX113524</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#10</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589533, constructed from sample accession ERS103824 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TAGCTTGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103824" refname="2042STDY5252563-sc-2012-03-13T13:21:00Z-1309927" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103824</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252563-sc-2012-03-13T13:21:00Z-1309927</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589533</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#11" center_name="SC" accession="ERX113525"> <IDENTIFIERS> <PRIMARY_ID>ERX113525</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#11</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589521, constructed from sample accession ERS103825 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence GGCTACAG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103825" refname="2042STDY5252564-sc-2012-03-13T13:21:01Z-1309931" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103825</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252564-sc-2012-03-13T13:21:01Z-1309931</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589521</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#12" center_name="SC" accession="ERX113526"> <IDENTIFIERS> <PRIMARY_ID>ERX113526</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#12</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589509, constructed from sample accession ERS103826 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence CTTGTACT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103826" refname="2042STDY5252565-sc-2012-03-13T13:21:02Z-1309933" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103826</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252565-sc-2012-03-13T13:21:02Z-1309933</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589509</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#13" center_name="SC" accession="ERX113527"> <IDENTIFIERS> <PRIMARY_ID>ERX113527</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#13</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589497, constructed from sample accession ERS103827 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TGGTTGTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103827" refname="2042STDY5252566-sc-2012-03-13T13:21:02Z-1309935" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103827</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252566-sc-2012-03-13T13:21:02Z-1309935</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589497</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#14" center_name="SC" accession="ERX113528"> <IDENTIFIERS> <PRIMARY_ID>ERX113528</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#14</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589485, constructed from sample accession ERS103828 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TCTCGGTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103828" refname="2042STDY5252567-sc-2012-03-13T13:21:03Z-1309937" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103828</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252567-sc-2012-03-13T13:21:03Z-1309937</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589485</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#15" center_name="SC" accession="ERX113529"> <IDENTIFIERS> <PRIMARY_ID>ERX113529</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#15</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589473, constructed from sample accession ERS103829 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TAAGCGTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103829" refname="2042STDY5252568-sc-2012-03-13T13:21:04Z-1309939" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103829</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252568-sc-2012-03-13T13:21:04Z-1309939</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589473</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#16" center_name="SC" accession="ERX113530"> <IDENTIFIERS> <PRIMARY_ID>ERX113530</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#16</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589461, constructed from sample accession ERS103830 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TCCGTCTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103830" refname="2042STDY5252569-sc-2012-03-13T13:21:05Z-1309940" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103830</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252569-sc-2012-03-13T13:21:05Z-1309940</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589461</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#17" center_name="SC" accession="ERX113531"> <IDENTIFIERS> <PRIMARY_ID>ERX113531</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#17</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589544, constructed from sample accession ERS103831 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TGTACCTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103831" refname="2042STDY5252570-sc-2012-03-13T13:21:06Z-1309941" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103831</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252570-sc-2012-03-13T13:21:06Z-1309941</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589544</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#18" center_name="SC" accession="ERX113532"> <IDENTIFIERS> <PRIMARY_ID>ERX113532</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#18</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589532, constructed from sample accession ERS103832 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TTCTGTGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103832" refname="2042STDY5252571-sc-2012-03-13T13:21:07Z-1309942" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103832</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252571-sc-2012-03-13T13:21:07Z-1309942</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589532</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#19" center_name="SC" accession="ERX113533"> <IDENTIFIERS> <PRIMARY_ID>ERX113533</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#19</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589520, constructed from sample accession ERS103833 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TCTGCTGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103833" refname="2042STDY5252572-sc-2012-03-13T13:21:08Z-1309945" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103833</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252572-sc-2012-03-13T13:21:08Z-1309945</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589520</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#20" center_name="SC" accession="ERX113534"> <IDENTIFIERS> <PRIMARY_ID>ERX113534</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#20</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589508, constructed from sample accession ERS103834 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TTGGAGGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103834" refname="2042STDY5252573-sc-2012-03-13T13:21:08Z-1309947" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103834</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252573-sc-2012-03-13T13:21:08Z-1309947</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589508</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#21" center_name="SC" accession="ERX113535"> <IDENTIFIERS> <PRIMARY_ID>ERX113535</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#21</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589496, constructed from sample accession ERS103835 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TCGAGCGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103835" refname="2042STDY5252574-sc-2012-03-13T13:21:09Z-1309949" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103835</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252574-sc-2012-03-13T13:21:09Z-1309949</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589496</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#22" center_name="SC" accession="ERX113536"> <IDENTIFIERS> <PRIMARY_ID>ERX113536</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#22</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589484, constructed from sample accession ERS103836 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TGATACGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103836" refname="2042STDY5252575-sc-2012-03-13T13:21:10Z-1309951" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103836</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252575-sc-2012-03-13T13:21:10Z-1309951</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589484</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#23" center_name="SC" accession="ERX113537"> <IDENTIFIERS> <PRIMARY_ID>ERX113537</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#23</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589472, constructed from sample accession ERS103837 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TGCATAGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103837" refname="2042STDY5252576-sc-2012-03-13T13:21:11Z-1309953" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103837</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252576-sc-2012-03-13T13:21:11Z-1309953</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589472</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#24" center_name="SC" accession="ERX113538"> <IDENTIFIERS> <PRIMARY_ID>ERX113538</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#24</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589460, constructed from sample accession ERS103838 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TTGACTCT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103838" refname="2042STDY5252674-sc-2012-03-13T13:21:12Z-1309982" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103838</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252674-sc-2012-03-13T13:21:12Z-1309982</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589460</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#25" center_name="SC" accession="ERX113539"> <IDENTIFIERS> <PRIMARY_ID>ERX113539</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#25</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589543, constructed from sample accession ERS103839 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TGCGATCT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103839" refname="2042STDY5252675-sc-2012-03-13T13:21:12Z-1309983" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103839</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252675-sc-2012-03-13T13:21:12Z-1309983</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589543</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#26" center_name="SC" accession="ERX113540"> <IDENTIFIERS> <PRIMARY_ID>ERX113540</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#26</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589531, constructed from sample accession ERS103840 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TTCCTGCT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103840" refname="2042STDY5252676-sc-2012-03-13T13:21:13Z-1309984" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103840</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252676-sc-2012-03-13T13:21:13Z-1309984</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589531</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#59" center_name="SC" accession="ERX113668"> <IDENTIFIERS> <PRIMARY_ID>ERX113668</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#59</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609088, constructed from sample accession ERS103932 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TAGAACAC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103932" refname="2042STDY5252805-sc-2012-03-13T13:22:35Z-1310076" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103932</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252805-sc-2012-03-13T13:22:35Z-1310076</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609088</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#60" center_name="SC" accession="ERX113669"> <IDENTIFIERS> <PRIMARY_ID>ERX113669</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#60</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609076, constructed from sample accession ERS103934 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TCATCCTA.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103934" refname="2042STDY5252806-sc-2012-03-13T13:22:36Z-1310078" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103934</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252806-sc-2012-03-13T13:22:36Z-1310078</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609076</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#61" center_name="SC" accession="ERX113670"> <IDENTIFIERS> <PRIMARY_ID>ERX113670</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#61</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609064, constructed from sample accession ERS103935 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TGCTGATA.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103935" refname="2042STDY5252807-sc-2012-03-13T13:22:37Z-1310079" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103935</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252807-sc-2012-03-13T13:22:37Z-1310079</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609064</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#62" center_name="SC" accession="ERX113671"> <IDENTIFIERS> <PRIMARY_ID>ERX113671</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#62</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609052, constructed from sample accession ERS103942 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TAGACGGA.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103942" refname="2042STDY5252808-sc-2012-03-13T13:22:44Z-1310086" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103942</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252808-sc-2012-03-13T13:22:44Z-1310086</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609052</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#63" center_name="SC" accession="ERX113672"> <IDENTIFIERS> <PRIMARY_ID>ERX113672</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#63</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609040, constructed from sample accession ERS103943 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TGTGAAGA.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103943" refname="2042STDY5252809-sc-2012-03-13T13:22:45Z-1310087" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103943</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252809-sc-2012-03-13T13:22:45Z-1310087</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609040</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#64" center_name="SC" accession="ERX113673"> <IDENTIFIERS> <PRIMARY_ID>ERX113673</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#64</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609028, constructed from sample accession ERS103944 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TCTCTTCA.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103944" refname="2042STDY5252810-sc-2012-03-13T13:22:45Z-1310088" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103944</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252810-sc-2012-03-13T13:22:45Z-1310088</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609028</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#65" center_name="SC" accession="ERX113674"> <IDENTIFIERS> <PRIMARY_ID>ERX113674</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#65</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609111, constructed from sample accession ERS103945 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TTGTTCCA.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103945" refname="2042STDY5252811-sc-2012-03-13T13:22:46Z-1310089" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103945</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252811-sc-2012-03-13T13:22:46Z-1310089</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609111</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#66" center_name="SC" accession="ERX113675"> <IDENTIFIERS> <PRIMARY_ID>ERX113675</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#66</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609099, constructed from sample accession ERS103947 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TGAAGCCA.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103947" refname="2042STDY5252812-sc-2012-03-13T13:22:48Z-1310091" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103947</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252812-sc-2012-03-13T13:22:48Z-1310091</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609099</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#67" center_name="SC" accession="ERX113676"> <IDENTIFIERS> <PRIMARY_ID>ERX113676</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#67</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609087, constructed from sample accession ERS103948 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TACCACCA.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103948" refname="2042STDY5252813-sc-2012-03-13T13:22:48Z-1310092" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103948</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252813-sc-2012-03-13T13:22:48Z-1310092</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609087</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#68" center_name="SC" accession="ERX113677"> <IDENTIFIERS> <PRIMARY_ID>ERX113677</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#68</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609075, constructed from sample accession ERS103950 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TGCGTGAA.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103950" refname="2042STDY5252814-sc-2012-03-13T13:22:50Z-1310094" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103950</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252814-sc-2012-03-13T13:22:50Z-1310094</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609075</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#69" center_name="SC" accession="ERX113678"> <IDENTIFIERS> <PRIMARY_ID>ERX113678</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#69</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609063, constructed from sample accession ERS103957 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence GGTGAGTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103957" refname="2042STDY5252815-sc-2012-03-13T13:22:57Z-1310101" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103957</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252815-sc-2012-03-13T13:22:57Z-1310101</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609063</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#70" center_name="SC" accession="ERX113679"> <IDENTIFIERS> <PRIMARY_ID>ERX113679</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#70</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609051, constructed from sample accession ERS103959 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence GATCTCTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103959" refname="2042STDY5252816-sc-2012-03-13T13:22:59Z-1310103" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103959</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252816-sc-2012-03-13T13:22:59Z-1310103</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609051</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#71" center_name="SC" accession="ERX113680"> <IDENTIFIERS> <PRIMARY_ID>ERX113680</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#71</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609039, constructed from sample accession ERS103960 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence GTGTCCTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103960" refname="2042STDY5252817-sc-2012-03-13T13:22:59Z-1310104" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103960</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252817-sc-2012-03-13T13:22:59Z-1310104</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609039</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#72" center_name="SC" accession="ERX113681"> <IDENTIFIERS> <PRIMARY_ID>ERX113681</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#72</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609027, constructed from sample accession ERS103962 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence GACGGATT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103962" refname="2042STDY5252818-sc-2012-03-13T13:23:01Z-1310106" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103962</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252818-sc-2012-03-13T13:23:01Z-1310106</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609027</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#73" center_name="SC" accession="ERX113682"> <IDENTIFIERS> <PRIMARY_ID>ERX113682</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#73</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609110, constructed from sample accession ERS103964 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence GCAACATT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103964" refname="2042STDY5252819-sc-2012-03-13T13:23:02Z-1310108" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103964</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252819-sc-2012-03-13T13:23:02Z-1310108</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609110</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#74" center_name="SC" accession="ERX113683"> <IDENTIFIERS> <PRIMARY_ID>ERX113683</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#74</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609098, constructed from sample accession ERS103966 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence GGTCGTGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103966" refname="2042STDY5252820-sc-2012-03-13T13:23:04Z-1310110" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103966</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252820-sc-2012-03-13T13:23:04Z-1310110</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609098</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#75" center_name="SC" accession="ERX113684"> <IDENTIFIERS> <PRIMARY_ID>ERX113684</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#75</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609086, constructed from sample accession ERS103968 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence GAATCTGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103968" refname="2042STDY5252821-sc-2012-03-13T13:23:06Z-1310112" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103968</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252821-sc-2012-03-13T13:23:06Z-1310112</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609086</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#76" center_name="SC" accession="ERX113685"> <IDENTIFIERS> <PRIMARY_ID>ERX113685</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#76</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609074, constructed from sample accession ERS103971 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence GTACATCT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103971" refname="2042STDY5252822-sc-2012-03-13T13:23:08Z-1310115" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103971</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252822-sc-2012-03-13T13:23:08Z-1310115</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609074</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#77" center_name="SC" accession="ERX113686"> <IDENTIFIERS> <PRIMARY_ID>ERX113686</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#77</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609062, constructed from sample accession ERS103972 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence GAGGTGCT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103972" refname="2042STDY5252823-sc-2012-03-13T13:23:09Z-1310116" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103972</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252823-sc-2012-03-13T13:23:09Z-1310116</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609062</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#78" center_name="SC" accession="ERX113687"> <IDENTIFIERS> <PRIMARY_ID>ERX113687</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#78</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609050, constructed from sample accession ERS103973 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence GCATGGCT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103973" refname="2042STDY5252824-sc-2012-03-13T13:23:10Z-1310117" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103973</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252824-sc-2012-03-13T13:23:10Z-1310117</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609050</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#79" center_name="SC" accession="ERX113688"> <IDENTIFIERS> <PRIMARY_ID>ERX113688</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#79</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609038, constructed from sample accession ERS103975 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence GTTAGCCT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103975" refname="2042STDY5252825-sc-2012-03-13T13:23:12Z-1310119" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103975</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252825-sc-2012-03-13T13:23:12Z-1310119</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609038</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#80" center_name="SC" accession="ERX113689"> <IDENTIFIERS> <PRIMARY_ID>ERX113689</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#80</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609026, constructed from sample accession ERS103978 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence GTCGCTAT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103978" refname="2042STDY5252826-sc-2012-03-13T13:23:14Z-1310122" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103978</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252826-sc-2012-03-13T13:23:14Z-1310122</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609026</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#81" center_name="SC" accession="ERX113690"> <IDENTIFIERS> <PRIMARY_ID>ERX113690</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#81</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609109, constructed from sample accession ERS103980 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence GGAATGAT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103980" refname="2042STDY5252827-sc-2012-03-13T13:23:16Z-1310124" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103980</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252827-sc-2012-03-13T13:23:16Z-1310124</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609109</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#82" center_name="SC" accession="ERX113691"> <IDENTIFIERS> <PRIMARY_ID>ERX113691</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#82</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609097, constructed from sample accession ERS103985 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence GAGCCAAT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103985" refname="2042STDY5252828-sc-2012-03-13T13:23:20Z-1310129" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103985</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252828-sc-2012-03-13T13:23:20Z-1310129</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609097</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#83" center_name="SC" accession="ERX113692"> <IDENTIFIERS> <PRIMARY_ID>ERX113692</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#83</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609085, constructed from sample accession ERS103986 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence GCTCCTTG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103986" refname="2042STDY5252829-sc-2012-03-13T13:23:20Z-1310130" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103986</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252829-sc-2012-03-13T13:23:20Z-1310130</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609085</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#84" center_name="SC" accession="ERX113693"> <IDENTIFIERS> <PRIMARY_ID>ERX113693</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#84</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609073, constructed from sample accession ERS103987 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence GTAAGGTG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103987" refname="2042STDY5252830-sc-2012-03-13T13:23:22Z-1310131" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103987</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252830-sc-2012-03-13T13:23:22Z-1310131</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609073</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#85" center_name="SC" accession="ERX113694"> <IDENTIFIERS> <PRIMARY_ID>ERX113694</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#85</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609061, constructed from sample accession ERS103988 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence GAGGATGG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103988" refname="2042STDY5252831-sc-2012-03-13T13:23:22Z-1310132" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103988</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252831-sc-2012-03-13T13:23:22Z-1310132</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609061</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#86" center_name="SC" accession="ERX113695"> <IDENTIFIERS> <PRIMARY_ID>ERX113695</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#86</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609049, constructed from sample accession ERS103989 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence GTTGTCGG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103989" refname="2042STDY5252832-sc-2012-03-13T13:23:23Z-1310133" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103989</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252832-sc-2012-03-13T13:23:23Z-1310133</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609049</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#87" center_name="SC" accession="ERX113696"> <IDENTIFIERS> <PRIMARY_ID>ERX113696</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#87</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609037, constructed from sample accession ERS103990 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence GGATTAGG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103990" refname="2042STDY5252833-sc-2012-03-13T13:23:24Z-1310134" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103990</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252833-sc-2012-03-13T13:23:24Z-1310134</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609037</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#88" center_name="SC" accession="ERX113697"> <IDENTIFIERS> <PRIMARY_ID>ERX113697</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#88</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609025, constructed from sample accession ERS103992 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence GATAGAGG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103992" refname="2042STDY5252834-sc-2012-03-13T13:23:26Z-1310136" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103992</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252834-sc-2012-03-13T13:23:26Z-1310136</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609025</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#89" center_name="SC" accession="ERX113698"> <IDENTIFIERS> <PRIMARY_ID>ERX113698</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#89</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609108, constructed from sample accession ERS103998 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence GTGTGTCG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103998" refname="2042STDY5252835-sc-2012-03-13T13:23:31Z-1310143" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103998</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252835-sc-2012-03-13T13:23:31Z-1310143</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609108</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#90" center_name="SC" accession="ERX113699"> <IDENTIFIERS> <PRIMARY_ID>ERX113699</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#90</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609096, constructed from sample accession ERS103999 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence GCAATCCG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103999" refname="2042STDY5252836-sc-2012-03-13T13:23:32Z-1310144" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103999</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252836-sc-2012-03-13T13:23:32Z-1310144</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609096</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#91" center_name="SC" accession="ERX113700"> <IDENTIFIERS> <PRIMARY_ID>ERX113700</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#91</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609084, constructed from sample accession ERS104000 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence GACCTTAG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104000" refname="2042STDY5252837-sc-2012-03-13T13:23:33Z-1310145" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104000</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252837-sc-2012-03-13T13:23:33Z-1310145</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609084</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#92" center_name="SC" accession="ERX113701"> <IDENTIFIERS> <PRIMARY_ID>ERX113701</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#92</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609072, constructed from sample accession ERS104001 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence GCCTGTTC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104001" refname="2042STDY5252838-sc-2012-03-13T13:23:34Z-1310146" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104001</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252838-sc-2012-03-13T13:23:34Z-1310146</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609072</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#93" center_name="SC" accession="ERX113702"> <IDENTIFIERS> <PRIMARY_ID>ERX113702</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#93</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609060, constructed from sample accession ERS104002 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence GCACTGTC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104002" refname="2042STDY5252839-sc-2012-03-13T13:23:34Z-1310147" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104002</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252839-sc-2012-03-13T13:23:34Z-1310147</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609060</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#94" center_name="SC" accession="ERX113703"> <IDENTIFIERS> <PRIMARY_ID>ERX113703</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#94</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609048, constructed from sample accession ERS104003 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence GCTAACTC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104003" refname="2042STDY5252840-sc-2012-03-13T13:23:35Z-1310148" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104003</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252840-sc-2012-03-13T13:23:35Z-1310148</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609048</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#95" center_name="SC" accession="ERX113704"> <IDENTIFIERS> <PRIMARY_ID>ERX113704</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#95</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609036, constructed from sample accession ERS104004 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence GATTCATC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104004" refname="2042STDY5252841-sc-2012-03-13T13:23:36Z-1310149" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104004</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252841-sc-2012-03-13T13:23:36Z-1310149</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609036</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#1" center_name="SC" accession="ERX113705"> <IDENTIFIERS> <PRIMARY_ID>ERX113705</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#1</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587703, constructed from sample accession ERS104005 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence ATCACGTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104005" refname="2042STDY5252842-sc-2012-03-13T13:23:37Z-1310150" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104005</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252842-sc-2012-03-13T13:23:37Z-1310150</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587703</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#2" center_name="SC" accession="ERX113706"> <IDENTIFIERS> <PRIMARY_ID>ERX113706</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#2</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587691, constructed from sample accession ERS104006 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence CGATGTTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104006" refname="2042STDY5252843-sc-2012-03-13T13:23:38Z-1310151" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104006</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252843-sc-2012-03-13T13:23:38Z-1310151</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587691</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#3" center_name="SC" accession="ERX113707"> <IDENTIFIERS> <PRIMARY_ID>ERX113707</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#3</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587679, constructed from sample accession ERS104007 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TTAGGCAT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104007" refname="2042STDY5252844-sc-2012-03-13T13:23:39Z-1310152" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104007</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252844-sc-2012-03-13T13:23:39Z-1310152</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587679</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#4" center_name="SC" accession="ERX113708"> <IDENTIFIERS> <PRIMARY_ID>ERX113708</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#4</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587667, constructed from sample accession ERS104008 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TGACCACT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104008" refname="2042STDY5252845-sc-2012-03-13T13:23:40Z-1310153" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104008</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252845-sc-2012-03-13T13:23:40Z-1310153</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587667</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#5" center_name="SC" accession="ERX113709"> <IDENTIFIERS> <PRIMARY_ID>ERX113709</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#5</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587655, constructed from sample accession ERS104009 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence ACAGTGGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104009" refname="2042STDY5252846-sc-2012-03-13T13:23:41Z-1310154" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104009</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252846-sc-2012-03-13T13:23:41Z-1310154</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587655</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#6" center_name="SC" accession="ERX113710"> <IDENTIFIERS> <PRIMARY_ID>ERX113710</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#6</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587643, constructed from sample accession ERS104010 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence GCCAATGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104010" refname="2042STDY5252847-sc-2012-03-13T13:23:42Z-1310155" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104010</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252847-sc-2012-03-13T13:23:42Z-1310155</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587643</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#7" center_name="SC" accession="ERX113711"> <IDENTIFIERS> <PRIMARY_ID>ERX113711</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#7</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587631, constructed from sample accession ERS104011 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence CAGATCTG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104011" refname="2042STDY5252848-sc-2012-03-13T13:23:43Z-1310156" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104011</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252848-sc-2012-03-13T13:23:43Z-1310156</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587631</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#8" center_name="SC" accession="ERX113712"> <IDENTIFIERS> <PRIMARY_ID>ERX113712</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#8</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587619, constructed from sample accession ERS104012 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence ACTTGATG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104012" refname="2042STDY5252849-sc-2012-03-13T13:23:43Z-1310157" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104012</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252849-sc-2012-03-13T13:23:43Z-1310157</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587619</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#9" center_name="SC" accession="ERX113713"> <IDENTIFIERS> <PRIMARY_ID>ERX113713</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#9</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587702, constructed from sample accession ERS104013 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence GATCAGCG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104013" refname="2042STDY5252850-sc-2012-03-13T13:23:44Z-1310158" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104013</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252850-sc-2012-03-13T13:23:44Z-1310158</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587702</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#10" center_name="SC" accession="ERX113714"> <IDENTIFIERS> <PRIMARY_ID>ERX113714</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#10</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587690, constructed from sample accession ERS104014 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TAGCTTGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104014" refname="2042STDY5252851-sc-2012-03-13T13:23:45Z-1310159" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104014</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252851-sc-2012-03-13T13:23:45Z-1310159</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587690</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#11" center_name="SC" accession="ERX113715"> <IDENTIFIERS> <PRIMARY_ID>ERX113715</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#11</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587678, constructed from sample accession ERS104015 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence GGCTACAG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104015" refname="2042STDY5252852-sc-2012-03-13T13:23:46Z-1310160" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104015</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252852-sc-2012-03-13T13:23:46Z-1310160</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587678</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#12" center_name="SC" accession="ERX113716"> <IDENTIFIERS> <PRIMARY_ID>ERX113716</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#12</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587666, constructed from sample accession ERS104016 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence CTTGTACT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104016" refname="2042STDY5252853-sc-2012-03-13T13:23:47Z-1310161" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104016</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252853-sc-2012-03-13T13:23:47Z-1310161</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587666</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#13" center_name="SC" accession="ERX113717"> <IDENTIFIERS> <PRIMARY_ID>ERX113717</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#13</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587654, constructed from sample accession ERS104017 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TGGTTGTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104017" refname="2042STDY5252854-sc-2012-03-13T13:23:48Z-1310162" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104017</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252854-sc-2012-03-13T13:23:48Z-1310162</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587654</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#14" center_name="SC" accession="ERX113718"> <IDENTIFIERS> <PRIMARY_ID>ERX113718</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#14</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587642, constructed from sample accession ERS104018 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TCTCGGTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104018" refname="2042STDY5252855-sc-2012-03-13T13:23:49Z-1310163" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104018</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252855-sc-2012-03-13T13:23:49Z-1310163</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587642</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#15" center_name="SC" accession="ERX113719"> <IDENTIFIERS> <PRIMARY_ID>ERX113719</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#15</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587630, constructed from sample accession ERS104019 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TAAGCGTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104019" refname="2042STDY5252856-sc-2012-03-13T13:23:50Z-1310164" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104019</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252856-sc-2012-03-13T13:23:50Z-1310164</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587630</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#16" center_name="SC" accession="ERX113720"> <IDENTIFIERS> <PRIMARY_ID>ERX113720</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#16</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587618, constructed from sample accession ERS104020 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TCCGTCTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104020" refname="2042STDY5252857-sc-2012-03-13T13:23:51Z-1310165" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104020</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252857-sc-2012-03-13T13:23:51Z-1310165</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587618</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#17" center_name="SC" accession="ERX113721"> <IDENTIFIERS> <PRIMARY_ID>ERX113721</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#17</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587701, constructed from sample accession ERS104021 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TGTACCTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104021" refname="2042STDY5252858-sc-2012-03-13T13:23:51Z-1310166" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104021</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252858-sc-2012-03-13T13:23:51Z-1310166</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587701</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#18" center_name="SC" accession="ERX113722"> <IDENTIFIERS> <PRIMARY_ID>ERX113722</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#18</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587689, constructed from sample accession ERS104022 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TTCTGTGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104022" refname="2042STDY5252859-sc-2012-03-13T13:23:52Z-1310167" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104022</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252859-sc-2012-03-13T13:23:52Z-1310167</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587689</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#27" center_name="SC" accession="ERX113541"> <IDENTIFIERS> <PRIMARY_ID>ERX113541</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#27</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589519, constructed from sample accession ERS103841 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TAGTGACT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103841" refname="2042STDY5252677-sc-2012-03-13T13:21:14Z-1309985" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103841</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252677-sc-2012-03-13T13:21:14Z-1309985</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589519</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#28" center_name="SC" accession="ERX113542"> <IDENTIFIERS> <PRIMARY_ID>ERX113542</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#28</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589507, constructed from sample accession ERS103842 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TACAGGAT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103842" refname="2042STDY5252678-sc-2012-03-13T13:21:15Z-1309986" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103842</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252678-sc-2012-03-13T13:21:15Z-1309986</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589507</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#29" center_name="SC" accession="ERX113543"> <IDENTIFIERS> <PRIMARY_ID>ERX113543</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#29</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589495, constructed from sample accession ERS103843 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TCCTCAAT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103843" refname="2042STDY5252679-sc-2012-03-13T13:21:15Z-1309987" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103843</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252679-sc-2012-03-13T13:21:15Z-1309987</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589495</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#30" center_name="SC" accession="ERX113544"> <IDENTIFIERS> <PRIMARY_ID>ERX113544</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#30</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589483, constructed from sample accession ERS103844 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TGTGGTTG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103844" refname="2042STDY5252680-sc-2012-03-13T13:21:16Z-1309988" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103844</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252680-sc-2012-03-13T13:21:16Z-1309988</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589483</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#31" center_name="SC" accession="ERX113545"> <IDENTIFIERS> <PRIMARY_ID>ERX113545</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#31</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589471, constructed from sample accession ERS103845 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TAGTCTTG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103845" refname="2042STDY5252681-sc-2012-03-13T13:21:17Z-1309989" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103845</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252681-sc-2012-03-13T13:21:17Z-1309989</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589471</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#32" center_name="SC" accession="ERX113546"> <IDENTIFIERS> <PRIMARY_ID>ERX113546</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#32</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589459, constructed from sample accession ERS103846 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TTCCATTG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103846" refname="2042STDY5252682-sc-2012-03-13T13:21:18Z-1309990" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103846</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252682-sc-2012-03-13T13:21:18Z-1309990</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589459</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#33" center_name="SC" accession="ERX113547"> <IDENTIFIERS> <PRIMARY_ID>ERX113547</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#33</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589542, constructed from sample accession ERS103847 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TCGAAGTG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103847" refname="2042STDY5252683-sc-2012-03-13T13:21:19Z-1309991" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103847</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252683-sc-2012-03-13T13:21:19Z-1309991</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589542</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#19" center_name="SC" accession="ERX113723"> <IDENTIFIERS> <PRIMARY_ID>ERX113723</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#19</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587677, constructed from sample accession ERS104023 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TCTGCTGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104023" refname="2042STDY5252860-sc-2012-03-13T13:23:53Z-1310168" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104023</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252860-sc-2012-03-13T13:23:53Z-1310168</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587677</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#20" center_name="SC" accession="ERX113724"> <IDENTIFIERS> <PRIMARY_ID>ERX113724</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#20</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587665, constructed from sample accession ERS104024 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TTGGAGGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104024" refname="2042STDY5252861-sc-2012-03-13T13:23:54Z-1310169" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104024</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252861-sc-2012-03-13T13:23:54Z-1310169</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587665</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#21" center_name="SC" accession="ERX113725"> <IDENTIFIERS> <PRIMARY_ID>ERX113725</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#21</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587653, constructed from sample accession ERS104025 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TCGAGCGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104025" refname="2042STDY5252862-sc-2012-03-13T13:23:55Z-1310170" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104025</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252862-sc-2012-03-13T13:23:55Z-1310170</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587653</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#22" center_name="SC" accession="ERX113726"> <IDENTIFIERS> <PRIMARY_ID>ERX113726</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#22</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587641, constructed from sample accession ERS104026 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TGATACGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104026" refname="2042STDY5252863-sc-2012-03-13T13:23:56Z-1310171" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104026</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252863-sc-2012-03-13T13:23:56Z-1310171</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587641</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#23" center_name="SC" accession="ERX113727"> <IDENTIFIERS> <PRIMARY_ID>ERX113727</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#23</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587629, constructed from sample accession ERS104027 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TGCATAGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104027" refname="2042STDY5252864-sc-2012-03-13T13:23:56Z-1310172" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104027</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252864-sc-2012-03-13T13:23:56Z-1310172</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587629</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#24" center_name="SC" accession="ERX113728"> <IDENTIFIERS> <PRIMARY_ID>ERX113728</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#24</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587617, constructed from sample accession ERS104028 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TTGACTCT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104028" refname="2042STDY5252866-sc-2012-03-13T13:23:57Z-1310174" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104028</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252866-sc-2012-03-13T13:23:57Z-1310174</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587617</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#25" center_name="SC" accession="ERX113729"> <IDENTIFIERS> <PRIMARY_ID>ERX113729</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#25</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587700, constructed from sample accession ERS104029 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TGCGATCT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104029" refname="2042STDY5252867-sc-2012-03-13T13:23:58Z-1310175" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104029</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252867-sc-2012-03-13T13:23:58Z-1310175</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587700</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#26" center_name="SC" accession="ERX113730"> <IDENTIFIERS> <PRIMARY_ID>ERX113730</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#26</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587688, constructed from sample accession ERS104030 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TTCCTGCT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104030" refname="2042STDY5252868-sc-2012-03-13T13:23:59Z-1310176" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104030</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252868-sc-2012-03-13T13:23:59Z-1310176</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587688</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#27" center_name="SC" accession="ERX113731"> <IDENTIFIERS> <PRIMARY_ID>ERX113731</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#27</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587676, constructed from sample accession ERS104031 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TAGTGACT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104031" refname="2042STDY5252869-sc-2012-03-13T13:23:59Z-1310177" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104031</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252869-sc-2012-03-13T13:23:59Z-1310177</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587676</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#28" center_name="SC" accession="ERX113732"> <IDENTIFIERS> <PRIMARY_ID>ERX113732</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#28</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587664, constructed from sample accession ERS104032 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TACAGGAT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104032" refname="2042STDY5252870-sc-2012-03-13T13:24:01Z-1310178" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104032</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252870-sc-2012-03-13T13:24:01Z-1310178</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587664</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#29" center_name="SC" accession="ERX113733"> <IDENTIFIERS> <PRIMARY_ID>ERX113733</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#29</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587652, constructed from sample accession ERS104033 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TCCTCAAT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104033" refname="2042STDY5252871-sc-2012-03-13T13:24:01Z-1310179" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104033</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252871-sc-2012-03-13T13:24:01Z-1310179</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587652</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#30" center_name="SC" accession="ERX113734"> <IDENTIFIERS> <PRIMARY_ID>ERX113734</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#30</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587640, constructed from sample accession ERS104034 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TGTGGTTG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104034" refname="2042STDY5252872-sc-2012-03-13T13:24:02Z-1310180" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104034</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252872-sc-2012-03-13T13:24:02Z-1310180</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587640</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#31" center_name="SC" accession="ERX113735"> <IDENTIFIERS> <PRIMARY_ID>ERX113735</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#31</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587628, constructed from sample accession ERS104035 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TAGTCTTG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104035" refname="2042STDY5252873-sc-2012-03-13T13:24:03Z-1310181" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104035</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252873-sc-2012-03-13T13:24:03Z-1310181</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587628</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#32" center_name="SC" accession="ERX113736"> <IDENTIFIERS> <PRIMARY_ID>ERX113736</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#32</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587616, constructed from sample accession ERS104036 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TTCCATTG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104036" refname="2042STDY5252874-sc-2012-03-13T13:24:04Z-1310182" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104036</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252874-sc-2012-03-13T13:24:04Z-1310182</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587616</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#33" center_name="SC" accession="ERX113737"> <IDENTIFIERS> <PRIMARY_ID>ERX113737</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#33</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587699, constructed from sample accession ERS104037 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TCGAAGTG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104037" refname="2042STDY5252875-sc-2012-03-13T13:24:04Z-1310183" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104037</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252875-sc-2012-03-13T13:24:04Z-1310183</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587699</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#34" center_name="SC" accession="ERX113548"> <IDENTIFIERS> <PRIMARY_ID>ERX113548</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#34</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589530, constructed from sample accession ERS103848 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TAACGCTG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103848" refname="2042STDY5252684-sc-2012-03-13T13:21:20Z-1309992" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103848</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252684-sc-2012-03-13T13:21:20Z-1309992</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589530</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#35" center_name="SC" accession="ERX113549"> <IDENTIFIERS> <PRIMARY_ID>ERX113549</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#35</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589518, constructed from sample accession ERS103849 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TTGGTATG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103849" refname="2042STDY5252685-sc-2012-03-13T13:21:21Z-1309993" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103849</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252685-sc-2012-03-13T13:21:21Z-1309993</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589518</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#36" center_name="SC" accession="ERX113550"> <IDENTIFIERS> <PRIMARY_ID>ERX113550</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#36</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589506, constructed from sample accession ERS103850 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TGAACTGG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103850" refname="2042STDY5252686-sc-2012-03-13T13:21:22Z-1309994" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103850</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252686-sc-2012-03-13T13:21:22Z-1309994</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589506</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#37" center_name="SC" accession="ERX113551"> <IDENTIFIERS> <PRIMARY_ID>ERX113551</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#37</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589494, constructed from sample accession ERS103851 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TACTTCGG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103851" refname="2042STDY5252687-sc-2012-03-13T13:21:23Z-1309995" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103851</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252687-sc-2012-03-13T13:21:23Z-1309995</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589494</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#38" center_name="SC" accession="ERX113552"> <IDENTIFIERS> <PRIMARY_ID>ERX113552</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#38</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589482, constructed from sample accession ERS103852 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TCTCACGG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103852" refname="2042STDY5252688-sc-2012-03-13T13:21:24Z-1309996" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103852</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252688-sc-2012-03-13T13:21:24Z-1309996</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589482</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#39" center_name="SC" accession="ERX113553"> <IDENTIFIERS> <PRIMARY_ID>ERX113553</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#39</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589470, constructed from sample accession ERS103853 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TCAGGAGG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103853" refname="2042STDY5252689-sc-2012-03-13T13:21:25Z-1309997" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103853</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252689-sc-2012-03-13T13:21:25Z-1309997</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589470</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#40" center_name="SC" accession="ERX113554"> <IDENTIFIERS> <PRIMARY_ID>ERX113554</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#40</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589458, constructed from sample accession ERS103854 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TAAGTTCG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103854" refname="2042STDY5252690-sc-2012-03-13T13:21:27Z-1309998" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103854</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252690-sc-2012-03-13T13:21:27Z-1309998</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589458</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#41" center_name="SC" accession="ERX113555"> <IDENTIFIERS> <PRIMARY_ID>ERX113555</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#41</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589541, constructed from sample accession ERS103855 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TCCAGTCG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103855" refname="2042STDY5252691-sc-2012-03-13T13:21:27Z-1309999" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103855</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252691-sc-2012-03-13T13:21:27Z-1309999</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589541</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#42" center_name="SC" accession="ERX113556"> <IDENTIFIERS> <PRIMARY_ID>ERX113556</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#42</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589529, constructed from sample accession ERS103856 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TGTATGCG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103856" refname="2042STDY5252692-sc-2012-03-13T13:21:28Z-1310000" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103856</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252692-sc-2012-03-13T13:21:28Z-1310000</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589529</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#43" center_name="SC" accession="ERX113557"> <IDENTIFIERS> <PRIMARY_ID>ERX113557</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#43</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589517, constructed from sample accession ERS103857 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TCATTGAG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103857" refname="2042STDY5252693-sc-2012-03-13T13:21:29Z-1310001" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103857</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252693-sc-2012-03-13T13:21:29Z-1310001</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589517</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#44" center_name="SC" accession="ERX113558"> <IDENTIFIERS> <PRIMARY_ID>ERX113558</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#44</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589505, constructed from sample accession ERS103858 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TGGCTCAG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103858" refname="2042STDY5252694-sc-2012-03-13T13:21:30Z-1310002" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103858</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252694-sc-2012-03-13T13:21:30Z-1310002</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589505</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#45" center_name="SC" accession="ERX113559"> <IDENTIFIERS> <PRIMARY_ID>ERX113559</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#45</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589493, constructed from sample accession ERS103859 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TATGCCAG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103859" refname="2042STDY5252695-sc-2012-03-13T13:21:31Z-1310003" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103859</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252695-sc-2012-03-13T13:21:31Z-1310003</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589493</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#46" center_name="SC" accession="ERX113560"> <IDENTIFIERS> <PRIMARY_ID>ERX113560</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#46</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589481, constructed from sample accession ERS103860 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TCAGATTC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103860" refname="2042STDY5252696-sc-2012-03-13T13:21:31Z-1310004" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103860</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252696-sc-2012-03-13T13:21:31Z-1310004</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589481</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#47" center_name="SC" accession="ERX113561"> <IDENTIFIERS> <PRIMARY_ID>ERX113561</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#47</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589469, constructed from sample accession ERS103862 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TACTAGTC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103862" refname="2042STDY5252697-sc-2012-03-13T13:21:34Z-1310006" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103862</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252697-sc-2012-03-13T13:21:34Z-1310006</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589469</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#48" center_name="SC" accession="ERX113562"> <IDENTIFIERS> <PRIMARY_ID>ERX113562</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#48</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589457, constructed from sample accession ERS103864 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TTCAGCTC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103864" refname="2042STDY5252698-sc-2012-03-13T13:21:36Z-1310008" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103864</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252698-sc-2012-03-13T13:21:36Z-1310008</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589457</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#34" center_name="SC" accession="ERX113738"> <IDENTIFIERS> <PRIMARY_ID>ERX113738</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#34</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587687, constructed from sample accession ERS104038 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TAACGCTG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104038" refname="2042STDY5252876-sc-2012-03-13T13:24:05Z-1310184" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104038</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252876-sc-2012-03-13T13:24:05Z-1310184</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587687</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#35" center_name="SC" accession="ERX113739"> <IDENTIFIERS> <PRIMARY_ID>ERX113739</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#35</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587675, constructed from sample accession ERS104039 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TTGGTATG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104039" refname="2042STDY5252877-sc-2012-03-13T13:24:06Z-1310185" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104039</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252877-sc-2012-03-13T13:24:06Z-1310185</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587675</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#36" center_name="SC" accession="ERX113740"> <IDENTIFIERS> <PRIMARY_ID>ERX113740</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#36</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587663, constructed from sample accession ERS104040 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TGAACTGG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104040" refname="2042STDY5252878-sc-2012-03-13T13:24:07Z-1310186" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252878-sc-2012-03-13T13:24:07Z-1310186</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587663</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#37" center_name="SC" accession="ERX113741"> <IDENTIFIERS> <PRIMARY_ID>ERX113741</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#37</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587651, constructed from sample accession ERS104041 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TACTTCGG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104041" refname="2042STDY5252879-sc-2012-03-13T13:24:08Z-1310187" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104041</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252879-sc-2012-03-13T13:24:08Z-1310187</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587651</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#38" center_name="SC" accession="ERX113742"> <IDENTIFIERS> <PRIMARY_ID>ERX113742</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#38</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587639, constructed from sample accession ERS104042 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TCTCACGG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104042" refname="2042STDY5252880-sc-2012-03-13T13:24:09Z-1310188" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104042</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252880-sc-2012-03-13T13:24:09Z-1310188</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587639</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#39" center_name="SC" accession="ERX113743"> <IDENTIFIERS> <PRIMARY_ID>ERX113743</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#39</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587627, constructed from sample accession ERS104043 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TCAGGAGG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104043" refname="2042STDY5252881-sc-2012-03-13T13:24:09Z-1310189" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104043</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252881-sc-2012-03-13T13:24:09Z-1310189</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587627</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#40" center_name="SC" accession="ERX113744"> <IDENTIFIERS> <PRIMARY_ID>ERX113744</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#40</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587615, constructed from sample accession ERS104044 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TAAGTTCG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104044" refname="2042STDY5252882-sc-2012-03-13T13:24:10Z-1310190" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104044</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252882-sc-2012-03-13T13:24:10Z-1310190</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587615</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#41" center_name="SC" accession="ERX113745"> <IDENTIFIERS> <PRIMARY_ID>ERX113745</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#41</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587698, constructed from sample accession ERS104045 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TCCAGTCG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104045" refname="2042STDY5252883-sc-2012-03-13T13:24:11Z-1310191" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104045</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252883-sc-2012-03-13T13:24:11Z-1310191</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587698</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#42" center_name="SC" accession="ERX113746"> <IDENTIFIERS> <PRIMARY_ID>ERX113746</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#42</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587686, constructed from sample accession ERS104046 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TGTATGCG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104046" refname="2042STDY5252884-sc-2012-03-13T13:24:11Z-1310192" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104046</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252884-sc-2012-03-13T13:24:11Z-1310192</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587686</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#43" center_name="SC" accession="ERX113747"> <IDENTIFIERS> <PRIMARY_ID>ERX113747</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#43</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587674, constructed from sample accession ERS104047 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TCATTGAG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104047" refname="2042STDY5252885-sc-2012-03-13T13:24:12Z-1310193" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104047</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252885-sc-2012-03-13T13:24:12Z-1310193</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587674</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#44" center_name="SC" accession="ERX113748"> <IDENTIFIERS> <PRIMARY_ID>ERX113748</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#44</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587662, constructed from sample accession ERS104048 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TGGCTCAG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104048" refname="2042STDY5252886-sc-2012-03-13T13:24:13Z-1310194" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104048</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252886-sc-2012-03-13T13:24:13Z-1310194</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587662</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#45" center_name="SC" accession="ERX113749"> <IDENTIFIERS> <PRIMARY_ID>ERX113749</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#45</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587650, constructed from sample accession ERS104049 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TATGCCAG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104049" refname="2042STDY5252887-sc-2012-03-13T13:24:15Z-1310195" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104049</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252887-sc-2012-03-13T13:24:15Z-1310195</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587650</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#46" center_name="SC" accession="ERX113750"> <IDENTIFIERS> <PRIMARY_ID>ERX113750</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#46</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587638, constructed from sample accession ERS104050 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TCAGATTC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104050" refname="2042STDY5252888-sc-2012-03-13T13:24:16Z-1310196" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104050</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252888-sc-2012-03-13T13:24:16Z-1310196</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587638</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#47" center_name="SC" accession="ERX113751"> <IDENTIFIERS> <PRIMARY_ID>ERX113751</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#47</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587626, constructed from sample accession ERS104051 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TACTAGTC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104051" refname="2042STDY5252889-sc-2012-03-13T13:24:17Z-1310197" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104051</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252889-sc-2012-03-13T13:24:17Z-1310197</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587626</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#48" center_name="SC" accession="ERX113752"> <IDENTIFIERS> <PRIMARY_ID>ERX113752</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#48</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587614, constructed from sample accession ERS104052 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TTCAGCTC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104052" refname="2042STDY5252890-sc-2012-03-13T13:24:17Z-1310198" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104052</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252890-sc-2012-03-13T13:24:17Z-1310198</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587614</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#49" center_name="SC" accession="ERX113563"> <IDENTIFIERS> <PRIMARY_ID>ERX113563</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#49</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589540, constructed from sample accession ERS103866 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TGTCTATC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103866" refname="2042STDY5252699-sc-2012-03-13T13:21:38Z-1310010" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103866</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252699-sc-2012-03-13T13:21:38Z-1310010</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589540</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#50" center_name="SC" accession="ERX113564"> <IDENTIFIERS> <PRIMARY_ID>ERX113564</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#50</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589528, constructed from sample accession ERS103868 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TATGTGGC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103868" refname="2042STDY5252700-sc-2012-03-13T13:21:40Z-1310012" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103868</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252700-sc-2012-03-13T13:21:40Z-1310012</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589528</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#51" center_name="SC" accession="ERX113565"> <IDENTIFIERS> <PRIMARY_ID>ERX113565</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#51</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589516, constructed from sample accession ERS103869 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TTACTCGC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103869" refname="2042STDY5252701-sc-2012-03-13T13:21:40Z-1310013" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103869</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252701-sc-2012-03-13T13:21:40Z-1310013</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589516</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#52" center_name="SC" accession="ERX113566"> <IDENTIFIERS> <PRIMARY_ID>ERX113566</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#52</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589504, constructed from sample accession ERS103871 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TCGTTAGC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103871" refname="2042STDY5252702-sc-2012-03-13T13:21:43Z-1310015" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103871</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252702-sc-2012-03-13T13:21:43Z-1310015</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589504</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#53" center_name="SC" accession="ERX113567"> <IDENTIFIERS> <PRIMARY_ID>ERX113567</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#53</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589492, constructed from sample accession ERS103873 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TACCGAGC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103873" refname="2042STDY5252703-sc-2012-03-13T13:21:44Z-1310017" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103873</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252703-sc-2012-03-13T13:21:44Z-1310017</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589492</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#54" center_name="SC" accession="ERX113568"> <IDENTIFIERS> <PRIMARY_ID>ERX113568</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#54</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589480, constructed from sample accession ERS103876 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TGTTCTCC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103876" refname="2042STDY5252704-sc-2012-03-13T13:21:46Z-1310020" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103876</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252704-sc-2012-03-13T13:21:46Z-1310020</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589480</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#55" center_name="SC" accession="ERX113569"> <IDENTIFIERS> <PRIMARY_ID>ERX113569</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#55</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589468, constructed from sample accession ERS103879 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TTCGCACC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103879" refname="2042STDY5252705-sc-2012-03-13T13:21:49Z-1310023" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103879</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252705-sc-2012-03-13T13:21:49Z-1310023</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589468</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#56" center_name="SC" accession="ERX113570"> <IDENTIFIERS> <PRIMARY_ID>ERX113570</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#56</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589456, constructed from sample accession ERS103880 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TTGCGTAC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103880" refname="2042STDY5252706-sc-2012-03-13T13:21:50Z-1310024" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103880</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252706-sc-2012-03-13T13:21:50Z-1310024</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589456</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#57" center_name="SC" accession="ERX113571"> <IDENTIFIERS> <PRIMARY_ID>ERX113571</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#57</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589539, constructed from sample accession ERS103882 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TCTACGAC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103882" refname="2042STDY5252707-sc-2012-03-13T13:21:52Z-1310026" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103882</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252707-sc-2012-03-13T13:21:52Z-1310026</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589539</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#58" center_name="SC" accession="ERX113572"> <IDENTIFIERS> <PRIMARY_ID>ERX113572</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#58</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589527, constructed from sample accession ERS103883 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TGACAGAC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103883" refname="2042STDY5252708-sc-2012-03-13T13:21:53Z-1310027" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103883</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252708-sc-2012-03-13T13:21:53Z-1310027</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589527</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#59" center_name="SC" accession="ERX113573"> <IDENTIFIERS> <PRIMARY_ID>ERX113573</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#59</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589515, constructed from sample accession ERS103884 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TAGAACAC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103884" refname="2042STDY5252709-sc-2012-03-13T13:21:54Z-1310028" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103884</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252709-sc-2012-03-13T13:21:54Z-1310028</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589515</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#60" center_name="SC" accession="ERX113574"> <IDENTIFIERS> <PRIMARY_ID>ERX113574</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#60</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589503, constructed from sample accession ERS103887 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TCATCCTA.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103887" refname="2042STDY5252710-sc-2012-03-13T13:21:58Z-1310031" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103887</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252710-sc-2012-03-13T13:21:58Z-1310031</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589503</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#61" center_name="SC" accession="ERX113575"> <IDENTIFIERS> <PRIMARY_ID>ERX113575</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#61</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589491, constructed from sample accession ERS103888 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TGCTGATA.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103888" refname="2042STDY5252711-sc-2012-03-13T13:21:59Z-1310032" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103888</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252711-sc-2012-03-13T13:21:59Z-1310032</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589491</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#62" center_name="SC" accession="ERX113576"> <IDENTIFIERS> <PRIMARY_ID>ERX113576</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#62</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589479, constructed from sample accession ERS103890 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TAGACGGA.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103890" refname="2042STDY5252712-sc-2012-03-13T13:22:00Z-1310034" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103890</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252712-sc-2012-03-13T13:22:00Z-1310034</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589479</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#63" center_name="SC" accession="ERX113577"> <IDENTIFIERS> <PRIMARY_ID>ERX113577</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#63</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589467, constructed from sample accession ERS103892 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TGTGAAGA.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103892" refname="2042STDY5252713-sc-2012-03-13T13:22:02Z-1310036" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103892</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252713-sc-2012-03-13T13:22:02Z-1310036</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589467</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#49" center_name="SC" accession="ERX113753"> <IDENTIFIERS> <PRIMARY_ID>ERX113753</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#49</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587697, constructed from sample accession ERS104053 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TGTCTATC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104053" refname="2042STDY5252891-sc-2012-03-13T13:24:18Z-1310199" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104053</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252891-sc-2012-03-13T13:24:18Z-1310199</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587697</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#50" center_name="SC" accession="ERX113754"> <IDENTIFIERS> <PRIMARY_ID>ERX113754</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#50</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587685, constructed from sample accession ERS104055 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TATGTGGC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104055" refname="2042STDY5252893-sc-2012-03-13T13:24:20Z-1310201" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104055</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252893-sc-2012-03-13T13:24:20Z-1310201</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587685</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#51" center_name="SC" accession="ERX113755"> <IDENTIFIERS> <PRIMARY_ID>ERX113755</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#51</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587673, constructed from sample accession ERS104056 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TTACTCGC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104056" refname="2042STDY5252894-sc-2012-03-13T13:24:21Z-1310202" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104056</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252894-sc-2012-03-13T13:24:21Z-1310202</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587673</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#52" center_name="SC" accession="ERX113756"> <IDENTIFIERS> <PRIMARY_ID>ERX113756</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#52</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587661, constructed from sample accession ERS104057 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TCGTTAGC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104057" refname="2042STDY5252895-sc-2012-03-13T13:24:22Z-1310203" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104057</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252895-sc-2012-03-13T13:24:22Z-1310203</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587661</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#53" center_name="SC" accession="ERX113757"> <IDENTIFIERS> <PRIMARY_ID>ERX113757</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#53</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587649, constructed from sample accession ERS104058 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TACCGAGC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104058" refname="2042STDY5252896-sc-2012-03-13T13:24:23Z-1310204" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104058</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252896-sc-2012-03-13T13:24:23Z-1310204</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587649</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#54" center_name="SC" accession="ERX113758"> <IDENTIFIERS> <PRIMARY_ID>ERX113758</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#54</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587637, constructed from sample accession ERS104059 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TGTTCTCC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104059" refname="2042STDY5252897-sc-2012-03-13T13:24:23Z-1310205" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104059</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252897-sc-2012-03-13T13:24:23Z-1310205</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587637</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#55" center_name="SC" accession="ERX113759"> <IDENTIFIERS> <PRIMARY_ID>ERX113759</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#55</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587625, constructed from sample accession ERS104060 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TTCGCACC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104060" refname="2042STDY5252898-sc-2012-03-13T13:24:24Z-1310206" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104060</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252898-sc-2012-03-13T13:24:24Z-1310206</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587625</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#56" center_name="SC" accession="ERX113760"> <IDENTIFIERS> <PRIMARY_ID>ERX113760</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#56</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587613, constructed from sample accession ERS104061 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TTGCGTAC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104061" refname="2042STDY5252899-sc-2012-03-13T13:24:25Z-1310207" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104061</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252899-sc-2012-03-13T13:24:25Z-1310207</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587613</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#57" center_name="SC" accession="ERX113761"> <IDENTIFIERS> <PRIMARY_ID>ERX113761</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#57</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587696, constructed from sample accession ERS104062 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TCTACGAC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104062" refname="2042STDY5252900-sc-2012-03-13T13:24:26Z-1310208" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104062</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252900-sc-2012-03-13T13:24:26Z-1310208</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587696</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#58" center_name="SC" accession="ERX113762"> <IDENTIFIERS> <PRIMARY_ID>ERX113762</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#58</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587684, constructed from sample accession ERS104063 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TGACAGAC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104063" refname="2042STDY5252901-sc-2012-03-13T13:24:27Z-1310209" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104063</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252901-sc-2012-03-13T13:24:27Z-1310209</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587684</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#59" center_name="SC" accession="ERX113763"> <IDENTIFIERS> <PRIMARY_ID>ERX113763</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#59</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587672, constructed from sample accession ERS104064 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TAGAACAC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104064" refname="2042STDY5252902-sc-2012-03-13T13:24:28Z-1310210" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104064</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252902-sc-2012-03-13T13:24:28Z-1310210</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587672</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#60" center_name="SC" accession="ERX113764"> <IDENTIFIERS> <PRIMARY_ID>ERX113764</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#60</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587660, constructed from sample accession ERS104065 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TCATCCTA.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104065" refname="2042STDY5252903-sc-2012-03-13T13:24:29Z-1310211" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104065</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252903-sc-2012-03-13T13:24:29Z-1310211</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587660</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#61" center_name="SC" accession="ERX113765"> <IDENTIFIERS> <PRIMARY_ID>ERX113765</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#61</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587648, constructed from sample accession ERS104066 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TGCTGATA.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104066" refname="2042STDY5252904-sc-2012-03-13T13:24:30Z-1310212" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104066</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252904-sc-2012-03-13T13:24:30Z-1310212</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587648</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#62" center_name="SC" accession="ERX113766"> <IDENTIFIERS> <PRIMARY_ID>ERX113766</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#62</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587636, constructed from sample accession ERS104067 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TAGACGGA.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104067" refname="2042STDY5252905-sc-2012-03-13T13:24:30Z-1310213" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104067</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252905-sc-2012-03-13T13:24:30Z-1310213</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587636</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#63" center_name="SC" accession="ERX113767"> <IDENTIFIERS> <PRIMARY_ID>ERX113767</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#63</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587624, constructed from sample accession ERS104068 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TGTGAAGA.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104068" refname="2042STDY5252906-sc-2012-03-13T13:24:31Z-1310214" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104068</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252906-sc-2012-03-13T13:24:31Z-1310214</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587624</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#64" center_name="SC" accession="ERX113578"> <IDENTIFIERS> <PRIMARY_ID>ERX113578</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#64</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589455, constructed from sample accession ERS103894 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TCTCTTCA.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103894" refname="2042STDY5252714-sc-2012-03-13T13:22:04Z-1310038" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103894</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252714-sc-2012-03-13T13:22:04Z-1310038</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589455</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#65" center_name="SC" accession="ERX113579"> <IDENTIFIERS> <PRIMARY_ID>ERX113579</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#65</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589538, constructed from sample accession ERS103896 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TTGTTCCA.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103896" refname="2042STDY5252715-sc-2012-03-13T13:22:06Z-1310040" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103896</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252715-sc-2012-03-13T13:22:06Z-1310040</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589538</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#66" center_name="SC" accession="ERX113580"> <IDENTIFIERS> <PRIMARY_ID>ERX113580</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#66</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589526, constructed from sample accession ERS103898 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TGAAGCCA.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103898" refname="2042STDY5252716-sc-2012-03-13T13:22:08Z-1310042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103898</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252716-sc-2012-03-13T13:22:08Z-1310042</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589526</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#67" center_name="SC" accession="ERX113581"> <IDENTIFIERS> <PRIMARY_ID>ERX113581</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#67</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589514, constructed from sample accession ERS103903 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TACCACCA.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103903" refname="2042STDY5252717-sc-2012-03-13T13:22:12Z-1310047" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103903</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252717-sc-2012-03-13T13:22:12Z-1310047</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589514</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#68" center_name="SC" accession="ERX113582"> <IDENTIFIERS> <PRIMARY_ID>ERX113582</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#68</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589502, constructed from sample accession ERS103905 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TGCGTGAA.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103905" refname="2042STDY5252718-sc-2012-03-13T13:22:13Z-1310049" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103905</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252718-sc-2012-03-13T13:22:13Z-1310049</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589502</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#69" center_name="SC" accession="ERX113583"> <IDENTIFIERS> <PRIMARY_ID>ERX113583</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#69</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589490, constructed from sample accession ERS103907 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence GGTGAGTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103907" refname="2042STDY5252719-sc-2012-03-13T13:22:15Z-1310051" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103907</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252719-sc-2012-03-13T13:22:15Z-1310051</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589490</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#70" center_name="SC" accession="ERX113584"> <IDENTIFIERS> <PRIMARY_ID>ERX113584</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#70</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589478, constructed from sample accession ERS103908 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence GATCTCTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103908" refname="2042STDY5252720-sc-2012-03-13T13:22:15Z-1310052" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103908</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252720-sc-2012-03-13T13:22:15Z-1310052</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589478</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#71" center_name="SC" accession="ERX113585"> <IDENTIFIERS> <PRIMARY_ID>ERX113585</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#71</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589466, constructed from sample accession ERS103909 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence GTGTCCTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103909" refname="2042STDY5252721-sc-2012-03-13T13:22:16Z-1310053" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103909</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252721-sc-2012-03-13T13:22:16Z-1310053</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589466</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#72" center_name="SC" accession="ERX113586"> <IDENTIFIERS> <PRIMARY_ID>ERX113586</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#72</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589454, constructed from sample accession ERS103861 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence GACGGATT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103861" refname="2042STDY5252770-sc-2012-03-13T13:21:32Z-1310005" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103861</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252770-sc-2012-03-13T13:21:32Z-1310005</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589454</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#73" center_name="SC" accession="ERX113587"> <IDENTIFIERS> <PRIMARY_ID>ERX113587</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#73</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589537, constructed from sample accession ERS103863 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence GCAACATT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103863" refname="2042STDY5252771-sc-2012-03-13T13:21:35Z-1310007" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103863</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252771-sc-2012-03-13T13:21:35Z-1310007</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589537</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#74" center_name="SC" accession="ERX113588"> <IDENTIFIERS> <PRIMARY_ID>ERX113588</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#74</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589525, constructed from sample accession ERS103865 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence GGTCGTGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103865" refname="2042STDY5252772-sc-2012-03-13T13:21:37Z-1310009" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103865</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252772-sc-2012-03-13T13:21:37Z-1310009</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589525</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#75" center_name="SC" accession="ERX113589"> <IDENTIFIERS> <PRIMARY_ID>ERX113589</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#75</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589513, constructed from sample accession ERS103867 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence GAATCTGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103867" refname="2042STDY5252773-sc-2012-03-13T13:21:39Z-1310011" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103867</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252773-sc-2012-03-13T13:21:39Z-1310011</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589513</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#76" center_name="SC" accession="ERX113590"> <IDENTIFIERS> <PRIMARY_ID>ERX113590</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#76</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589501, constructed from sample accession ERS103870 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence GTACATCT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103870" refname="2042STDY5252774-sc-2012-03-13T13:21:41Z-1310014" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103870</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252774-sc-2012-03-13T13:21:41Z-1310014</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589501</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#77" center_name="SC" accession="ERX113591"> <IDENTIFIERS> <PRIMARY_ID>ERX113591</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#77</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589489, constructed from sample accession ERS103872 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence GAGGTGCT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103872" refname="2042STDY5252775-sc-2012-03-13T13:21:43Z-1310016" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103872</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252775-sc-2012-03-13T13:21:43Z-1310016</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589489</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#78" center_name="SC" accession="ERX113592"> <IDENTIFIERS> <PRIMARY_ID>ERX113592</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#78</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589477, constructed from sample accession ERS103874 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence GCATGGCT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103874" refname="2042STDY5252776-sc-2012-03-13T13:21:45Z-1310018" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103874</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252776-sc-2012-03-13T13:21:45Z-1310018</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589477</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#64" center_name="SC" accession="ERX113768"> <IDENTIFIERS> <PRIMARY_ID>ERX113768</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#64</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587612, constructed from sample accession ERS104069 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TCTCTTCA.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104069" refname="2042STDY5252907-sc-2012-03-13T13:24:32Z-1310215" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104069</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252907-sc-2012-03-13T13:24:32Z-1310215</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587612</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#65" center_name="SC" accession="ERX113769"> <IDENTIFIERS> <PRIMARY_ID>ERX113769</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#65</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587695, constructed from sample accession ERS104070 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TTGTTCCA.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104070" refname="2042STDY5252908-sc-2012-03-13T13:24:32Z-1310216" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104070</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252908-sc-2012-03-13T13:24:32Z-1310216</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587695</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#66" center_name="SC" accession="ERX113770"> <IDENTIFIERS> <PRIMARY_ID>ERX113770</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#66</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587683, constructed from sample accession ERS104071 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TGAAGCCA.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104071" refname="2042STDY5252909-sc-2012-03-13T13:24:33Z-1310217" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104071</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252909-sc-2012-03-13T13:24:33Z-1310217</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587683</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#67" center_name="SC" accession="ERX113771"> <IDENTIFIERS> <PRIMARY_ID>ERX113771</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#67</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587671, constructed from sample accession ERS104072 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TACCACCA.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104072" refname="2042STDY5252910-sc-2012-03-13T13:24:34Z-1310218" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104072</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252910-sc-2012-03-13T13:24:34Z-1310218</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587671</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#68" center_name="SC" accession="ERX113772"> <IDENTIFIERS> <PRIMARY_ID>ERX113772</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#68</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587659, constructed from sample accession ERS104073 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TGCGTGAA.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104073" refname="2042STDY5252911-sc-2012-03-13T13:24:35Z-1310219" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104073</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252911-sc-2012-03-13T13:24:35Z-1310219</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587659</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#69" center_name="SC" accession="ERX113773"> <IDENTIFIERS> <PRIMARY_ID>ERX113773</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#69</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587647, constructed from sample accession ERS104074 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence GGTGAGTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104074" refname="2042STDY5252912-sc-2012-03-13T13:24:36Z-1310220" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104074</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252912-sc-2012-03-13T13:24:36Z-1310220</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587647</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#70" center_name="SC" accession="ERX113774"> <IDENTIFIERS> <PRIMARY_ID>ERX113774</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#70</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587635, constructed from sample accession ERS104075 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence GATCTCTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104075" refname="2042STDY5252913-sc-2012-03-13T13:24:37Z-1310221" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104075</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252913-sc-2012-03-13T13:24:37Z-1310221</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587635</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#71" center_name="SC" accession="ERX113775"> <IDENTIFIERS> <PRIMARY_ID>ERX113775</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#71</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587623, constructed from sample accession ERS104076 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence GTGTCCTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104076" refname="2042STDY5252914-sc-2012-03-13T13:24:37Z-1310222" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104076</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252914-sc-2012-03-13T13:24:37Z-1310222</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587623</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#72" center_name="SC" accession="ERX113776"> <IDENTIFIERS> <PRIMARY_ID>ERX113776</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#72</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587611, constructed from sample accession ERS104077 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence GACGGATT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104077" refname="2042STDY5252915-sc-2012-03-13T13:24:38Z-1310223" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104077</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252915-sc-2012-03-13T13:24:38Z-1310223</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587611</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#73" center_name="SC" accession="ERX113777"> <IDENTIFIERS> <PRIMARY_ID>ERX113777</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#73</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587694, constructed from sample accession ERS104078 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence GCAACATT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104078" refname="2042STDY5252916-sc-2012-03-13T13:24:39Z-1310224" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104078</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252916-sc-2012-03-13T13:24:39Z-1310224</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587694</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#74" center_name="SC" accession="ERX113778"> <IDENTIFIERS> <PRIMARY_ID>ERX113778</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#74</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587682, constructed from sample accession ERS104079 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence GGTCGTGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104079" refname="2042STDY5252917-sc-2012-03-13T13:24:39Z-1310225" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104079</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252917-sc-2012-03-13T13:24:39Z-1310225</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587682</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#75" center_name="SC" accession="ERX113779"> <IDENTIFIERS> <PRIMARY_ID>ERX113779</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#75</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587670, constructed from sample accession ERS104080 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence GAATCTGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104080" refname="2042STDY5252918-sc-2012-03-13T13:24:41Z-1310226" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104080</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252918-sc-2012-03-13T13:24:41Z-1310226</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587670</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#76" center_name="SC" accession="ERX113780"> <IDENTIFIERS> <PRIMARY_ID>ERX113780</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#76</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587658, constructed from sample accession ERS104081 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence GTACATCT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104081" refname="2042STDY5252919-sc-2012-03-13T13:24:41Z-1310227" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104081</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252919-sc-2012-03-13T13:24:41Z-1310227</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587658</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#77" center_name="SC" accession="ERX113781"> <IDENTIFIERS> <PRIMARY_ID>ERX113781</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#77</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587646, constructed from sample accession ERS104082 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence GAGGTGCT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104082" refname="2042STDY5252920-sc-2012-03-13T13:24:42Z-1310228" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104082</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252920-sc-2012-03-13T13:24:42Z-1310228</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587646</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#78" center_name="SC" accession="ERX113782"> <IDENTIFIERS> <PRIMARY_ID>ERX113782</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#78</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587634, constructed from sample accession ERS104083 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence GCATGGCT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104083" refname="2042STDY5252921-sc-2012-03-13T13:24:43Z-1310229" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104083</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252921-sc-2012-03-13T13:24:43Z-1310229</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587634</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#79" center_name="SC" accession="ERX113593"> <IDENTIFIERS> <PRIMARY_ID>ERX113593</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#79</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589465, constructed from sample accession ERS103875 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence GTTAGCCT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103875" refname="2042STDY5252777-sc-2012-03-13T13:21:46Z-1310019" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103875</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252777-sc-2012-03-13T13:21:46Z-1310019</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589465</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#80" center_name="SC" accession="ERX113594"> <IDENTIFIERS> <PRIMARY_ID>ERX113594</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#80</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589453, constructed from sample accession ERS103877 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence GTCGCTAT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103877" refname="2042STDY5252778-sc-2012-03-13T13:21:47Z-1310021" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103877</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252778-sc-2012-03-13T13:21:47Z-1310021</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589453</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#81" center_name="SC" accession="ERX113595"> <IDENTIFIERS> <PRIMARY_ID>ERX113595</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#81</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589536, constructed from sample accession ERS103878 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence GGAATGAT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103878" refname="2042STDY5252779-sc-2012-03-13T13:21:48Z-1310022" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103878</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252779-sc-2012-03-13T13:21:48Z-1310022</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589536</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#82" center_name="SC" accession="ERX113596"> <IDENTIFIERS> <PRIMARY_ID>ERX113596</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#82</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589524, constructed from sample accession ERS103881 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence GAGCCAAT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103881" refname="2042STDY5252780-sc-2012-03-13T13:21:51Z-1310025" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103881</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252780-sc-2012-03-13T13:21:51Z-1310025</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589524</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#83" center_name="SC" accession="ERX113597"> <IDENTIFIERS> <PRIMARY_ID>ERX113597</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#83</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589512, constructed from sample accession ERS103885 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence GCTCCTTG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103885" refname="2042STDY5252781-sc-2012-03-13T13:21:55Z-1310029" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103885</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252781-sc-2012-03-13T13:21:55Z-1310029</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589512</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#84" center_name="SC" accession="ERX113598"> <IDENTIFIERS> <PRIMARY_ID>ERX113598</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#84</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589500, constructed from sample accession ERS103886 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence GTAAGGTG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103886" refname="2042STDY5252782-sc-2012-03-13T13:21:56Z-1310030" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103886</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252782-sc-2012-03-13T13:21:56Z-1310030</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589500</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#85" center_name="SC" accession="ERX113599"> <IDENTIFIERS> <PRIMARY_ID>ERX113599</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#85</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589488, constructed from sample accession ERS103889 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence GAGGATGG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103889" refname="2042STDY5252783-sc-2012-03-13T13:22:00Z-1310033" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103889</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252783-sc-2012-03-13T13:22:00Z-1310033</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589488</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#86" center_name="SC" accession="ERX113600"> <IDENTIFIERS> <PRIMARY_ID>ERX113600</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#86</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589476, constructed from sample accession ERS103891 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence GTTGTCGG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103891" refname="2042STDY5252784-sc-2012-03-13T13:22:01Z-1310035" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103891</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252784-sc-2012-03-13T13:22:01Z-1310035</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589476</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#87" center_name="SC" accession="ERX113601"> <IDENTIFIERS> <PRIMARY_ID>ERX113601</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#87</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589464, constructed from sample accession ERS103893 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence GGATTAGG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103893" refname="2042STDY5252785-sc-2012-03-13T13:22:03Z-1310037" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103893</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252785-sc-2012-03-13T13:22:03Z-1310037</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589464</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#88" center_name="SC" accession="ERX113602"> <IDENTIFIERS> <PRIMARY_ID>ERX113602</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#88</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589452, constructed from sample accession ERS103895 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence GATAGAGG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103895" refname="2042STDY5252786-sc-2012-03-13T13:22:05Z-1310039" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103895</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252786-sc-2012-03-13T13:22:05Z-1310039</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589452</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#89" center_name="SC" accession="ERX113603"> <IDENTIFIERS> <PRIMARY_ID>ERX113603</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#89</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589535, constructed from sample accession ERS103897 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence GTGTGTCG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103897" refname="2042STDY5252787-sc-2012-03-13T13:22:07Z-1310041" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103897</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252787-sc-2012-03-13T13:22:07Z-1310041</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589535</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#90" center_name="SC" accession="ERX113604"> <IDENTIFIERS> <PRIMARY_ID>ERX113604</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#90</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589523, constructed from sample accession ERS103899 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence GCAATCCG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103899" refname="2042STDY5252788-sc-2012-03-13T13:22:08Z-1310043" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103899</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252788-sc-2012-03-13T13:22:08Z-1310043</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589523</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#91" center_name="SC" accession="ERX113605"> <IDENTIFIERS> <PRIMARY_ID>ERX113605</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#91</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589511, constructed from sample accession ERS103900 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence GACCTTAG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103900" refname="2042STDY5252789-sc-2012-03-13T13:22:09Z-1310044" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103900</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252789-sc-2012-03-13T13:22:09Z-1310044</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589511</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#92" center_name="SC" accession="ERX113606"> <IDENTIFIERS> <PRIMARY_ID>ERX113606</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#92</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589499, constructed from sample accession ERS103901 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence GCCTGTTC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103901" refname="2042STDY5252790-sc-2012-03-13T13:22:10Z-1310045" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103901</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252790-sc-2012-03-13T13:22:10Z-1310045</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589499</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#93" center_name="SC" accession="ERX113607"> <IDENTIFIERS> <PRIMARY_ID>ERX113607</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#93</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589487, constructed from sample accession ERS103902 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence GCACTGTC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103902" refname="2042STDY5252791-sc-2012-03-13T13:22:10Z-1310046" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103902</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252791-sc-2012-03-13T13:22:10Z-1310046</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589487</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#79" center_name="SC" accession="ERX113783"> <IDENTIFIERS> <PRIMARY_ID>ERX113783</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#79</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587622, constructed from sample accession ERS104084 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence GTTAGCCT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104084" refname="2042STDY5252922-sc-2012-03-13T13:24:44Z-1310230" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104084</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252922-sc-2012-03-13T13:24:44Z-1310230</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587622</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#80" center_name="SC" accession="ERX113784"> <IDENTIFIERS> <PRIMARY_ID>ERX113784</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#80</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587610, constructed from sample accession ERS104085 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence GTCGCTAT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104085" refname="2042STDY5252923-sc-2012-03-13T13:24:45Z-1310231" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104085</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252923-sc-2012-03-13T13:24:45Z-1310231</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587610</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#81" center_name="SC" accession="ERX113785"> <IDENTIFIERS> <PRIMARY_ID>ERX113785</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#81</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587693, constructed from sample accession ERS104086 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence GGAATGAT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104086" refname="2042STDY5252924-sc-2012-03-13T13:24:45Z-1310232" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104086</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252924-sc-2012-03-13T13:24:45Z-1310232</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587693</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#82" center_name="SC" accession="ERX113786"> <IDENTIFIERS> <PRIMARY_ID>ERX113786</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#82</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587681, constructed from sample accession ERS104087 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence GAGCCAAT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104087" refname="2042STDY5252925-sc-2012-03-13T13:24:46Z-1310233" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104087</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252925-sc-2012-03-13T13:24:46Z-1310233</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587681</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#83" center_name="SC" accession="ERX113787"> <IDENTIFIERS> <PRIMARY_ID>ERX113787</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#83</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587669, constructed from sample accession ERS104088 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence GCTCCTTG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104088" refname="2042STDY5252926-sc-2012-03-13T13:24:47Z-1310234" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104088</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252926-sc-2012-03-13T13:24:47Z-1310234</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587669</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#84" center_name="SC" accession="ERX113788"> <IDENTIFIERS> <PRIMARY_ID>ERX113788</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#84</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587657, constructed from sample accession ERS104089 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence GTAAGGTG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104089" refname="2042STDY5252927-sc-2012-03-13T13:24:48Z-1310235" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104089</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252927-sc-2012-03-13T13:24:48Z-1310235</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587657</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#85" center_name="SC" accession="ERX113789"> <IDENTIFIERS> <PRIMARY_ID>ERX113789</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#85</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587645, constructed from sample accession ERS104090 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence GAGGATGG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104090" refname="2042STDY5252928-sc-2012-03-13T13:24:49Z-1310236" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104090</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252928-sc-2012-03-13T13:24:49Z-1310236</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587645</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#86" center_name="SC" accession="ERX113790"> <IDENTIFIERS> <PRIMARY_ID>ERX113790</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#86</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587633, constructed from sample accession ERS104091 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence GTTGTCGG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104091" refname="2042STDY5252929-sc-2012-03-13T13:24:50Z-1310237" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104091</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252929-sc-2012-03-13T13:24:50Z-1310237</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587633</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#87" center_name="SC" accession="ERX113791"> <IDENTIFIERS> <PRIMARY_ID>ERX113791</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#87</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587621, constructed from sample accession ERS104092 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence GGATTAGG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104092" refname="2042STDY5252930-sc-2012-03-13T13:24:51Z-1310238" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104092</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252930-sc-2012-03-13T13:24:51Z-1310238</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587621</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#88" center_name="SC" accession="ERX113792"> <IDENTIFIERS> <PRIMARY_ID>ERX113792</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#88</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587609, constructed from sample accession ERS104093 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence GATAGAGG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104093" refname="2042STDY5252931-sc-2012-03-13T13:24:51Z-1310239" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104093</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252931-sc-2012-03-13T13:24:51Z-1310239</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587609</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#89" center_name="SC" accession="ERX113793"> <IDENTIFIERS> <PRIMARY_ID>ERX113793</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#89</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587692, constructed from sample accession ERS104094 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence GTGTGTCG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104094" refname="2042STDY5252932-sc-2012-03-13T13:24:52Z-1310240" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104094</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252932-sc-2012-03-13T13:24:52Z-1310240</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587692</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#90" center_name="SC" accession="ERX113794"> <IDENTIFIERS> <PRIMARY_ID>ERX113794</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#90</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587680, constructed from sample accession ERS104095 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence GCAATCCG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104095" refname="2042STDY5252933-sc-2012-03-13T13:24:53Z-1310241" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104095</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252933-sc-2012-03-13T13:24:53Z-1310241</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587680</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#91" center_name="SC" accession="ERX113795"> <IDENTIFIERS> <PRIMARY_ID>ERX113795</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#91</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587668, constructed from sample accession ERS104096 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence GACCTTAG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104096" refname="2042STDY5252934-sc-2012-03-13T13:24:54Z-1310242" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104096</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252934-sc-2012-03-13T13:24:54Z-1310242</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587668</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#92" center_name="SC" accession="ERX113796"> <IDENTIFIERS> <PRIMARY_ID>ERX113796</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#92</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587656, constructed from sample accession ERS104097 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence GCCTGTTC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104097" refname="2042STDY5252935-sc-2012-03-13T13:24:55Z-1310243" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104097</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252935-sc-2012-03-13T13:24:55Z-1310243</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587656</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#93" center_name="SC" accession="ERX113797"> <IDENTIFIERS> <PRIMARY_ID>ERX113797</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#93</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587644, constructed from sample accession ERS104098 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence GCACTGTC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104098" refname="2042STDY5252936-sc-2012-03-13T13:24:56Z-1310244" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104098</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252936-sc-2012-03-13T13:24:56Z-1310244</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587644</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#94" center_name="SC" accession="ERX113608"> <IDENTIFIERS> <PRIMARY_ID>ERX113608</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#94</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589475, constructed from sample accession ERS103904 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence GCTAACTC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103904" refname="2042STDY5252792-sc-2012-03-13T13:22:12Z-1310048" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103904</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252792-sc-2012-03-13T13:22:12Z-1310048</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589475</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#95" center_name="SC" accession="ERX113609"> <IDENTIFIERS> <PRIMARY_ID>ERX113609</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#95</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589463, constructed from sample accession ERS103906 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence GATTCATC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103906" refname="2042STDY5252793-sc-2012-03-13T13:22:14Z-1310050" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103906</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252793-sc-2012-03-13T13:22:14Z-1310050</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589463</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#1" center_name="SC" accession="ERX113610"> <IDENTIFIERS> <PRIMARY_ID>ERX113610</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#1</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609119, constructed from sample accession ERS103910 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence ATCACGTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103910" refname="2042STDY5252722-sc-2012-03-13T13:22:17Z-1310054" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103910</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252722-sc-2012-03-13T13:22:17Z-1310054</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609119</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#2" center_name="SC" accession="ERX113611"> <IDENTIFIERS> <PRIMARY_ID>ERX113611</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#2</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609107, constructed from sample accession ERS103911 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence CGATGTTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103911" refname="2042STDY5252723-sc-2012-03-13T13:22:18Z-1310055" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103911</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252723-sc-2012-03-13T13:22:18Z-1310055</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609107</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#3" center_name="SC" accession="ERX113612"> <IDENTIFIERS> <PRIMARY_ID>ERX113612</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#3</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609095, constructed from sample accession ERS103912 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TTAGGCAT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103912" refname="2042STDY5252724-sc-2012-03-13T13:22:19Z-1310056" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103912</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252724-sc-2012-03-13T13:22:19Z-1310056</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609095</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#4" center_name="SC" accession="ERX113613"> <IDENTIFIERS> <PRIMARY_ID>ERX113613</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#4</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609083, constructed from sample accession ERS103918 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TGACCACT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103918" refname="2042STDY5252725-sc-2012-03-13T13:22:23Z-1310062" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103918</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252725-sc-2012-03-13T13:22:23Z-1310062</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609083</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#5" center_name="SC" accession="ERX113614"> <IDENTIFIERS> <PRIMARY_ID>ERX113614</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#5</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609071, constructed from sample accession ERS103919 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence ACAGTGGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103919" refname="2042STDY5252726-sc-2012-03-13T13:22:24Z-1310063" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103919</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252726-sc-2012-03-13T13:22:24Z-1310063</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609071</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#6" center_name="SC" accession="ERX113615"> <IDENTIFIERS> <PRIMARY_ID>ERX113615</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#6</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609059, constructed from sample accession ERS103922 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence GCCAATGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103922" refname="2042STDY5252727-sc-2012-03-13T13:22:27Z-1310066" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103922</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252727-sc-2012-03-13T13:22:27Z-1310066</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609059</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#7" center_name="SC" accession="ERX113616"> <IDENTIFIERS> <PRIMARY_ID>ERX113616</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#7</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609047, constructed from sample accession ERS103923 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence CAGATCTG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103923" refname="2042STDY5252728-sc-2012-03-13T13:22:27Z-1310067" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103923</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252728-sc-2012-03-13T13:22:27Z-1310067</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609047</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#8" center_name="SC" accession="ERX113617"> <IDENTIFIERS> <PRIMARY_ID>ERX113617</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#8</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609035, constructed from sample accession ERS103924 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence ACTTGATG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103924" refname="2042STDY5252729-sc-2012-03-13T13:22:28Z-1310068" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103924</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252729-sc-2012-03-13T13:22:28Z-1310068</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609035</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#9" center_name="SC" accession="ERX113618"> <IDENTIFIERS> <PRIMARY_ID>ERX113618</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#9</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609118, constructed from sample accession ERS103925 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence GATCAGCG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103925" refname="2042STDY5252730-sc-2012-03-13T13:22:29Z-1310069" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103925</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252730-sc-2012-03-13T13:22:29Z-1310069</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609118</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#10" center_name="SC" accession="ERX113619"> <IDENTIFIERS> <PRIMARY_ID>ERX113619</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#10</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609106, constructed from sample accession ERS103926 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TAGCTTGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103926" refname="2042STDY5252731-sc-2012-03-13T13:22:30Z-1310070" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103926</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252731-sc-2012-03-13T13:22:30Z-1310070</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609106</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#11" center_name="SC" accession="ERX113620"> <IDENTIFIERS> <PRIMARY_ID>ERX113620</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#11</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609094, constructed from sample accession ERS103931 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence GGCTACAG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103931" refname="2042STDY5252732-sc-2012-03-13T13:22:34Z-1310075" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103931</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252732-sc-2012-03-13T13:22:34Z-1310075</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609094</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#12" center_name="SC" accession="ERX113621"> <IDENTIFIERS> <PRIMARY_ID>ERX113621</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#12</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609082, constructed from sample accession ERS103933 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence CTTGTACT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103933" refname="2042STDY5252733-sc-2012-03-13T13:22:35Z-1310077" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103933</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252733-sc-2012-03-13T13:22:35Z-1310077</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609082</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#13" center_name="SC" accession="ERX113622"> <IDENTIFIERS> <PRIMARY_ID>ERX113622</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#13</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609070, constructed from sample accession ERS103936 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TGGTTGTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103936" refname="2042STDY5252734-sc-2012-03-13T13:22:38Z-1310080" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103936</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252734-sc-2012-03-13T13:22:38Z-1310080</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609070</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#94" center_name="SC" accession="ERX113798"> <IDENTIFIERS> <PRIMARY_ID>ERX113798</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#94</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587632, constructed from sample accession ERS104099 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence GCTAACTC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104099" refname="2042STDY5252937-sc-2012-03-13T13:24:56Z-1310245" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104099</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252937-sc-2012-03-13T13:24:56Z-1310245</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587632</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#95" center_name="SC" accession="ERX113799"> <IDENTIFIERS> <PRIMARY_ID>ERX113799</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#95</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587620, constructed from sample accession ERS104100 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence GATTCATC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104100" refname="2042STDY5252938-sc-2012-03-13T13:24:57Z-1310246" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104100</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252938-sc-2012-03-13T13:24:57Z-1310246</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587620</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#14" center_name="SC" accession="ERX113623"> <IDENTIFIERS> <PRIMARY_ID>ERX113623</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#14</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609058, constructed from sample accession ERS103937 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TCTCGGTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103937" refname="2042STDY5252735-sc-2012-03-13T13:22:39Z-1310081" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103937</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252735-sc-2012-03-13T13:22:39Z-1310081</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609058</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#15" center_name="SC" accession="ERX113624"> <IDENTIFIERS> <PRIMARY_ID>ERX113624</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#15</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609046, constructed from sample accession ERS103938 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TAAGCGTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103938" refname="2042STDY5252736-sc-2012-03-13T13:22:40Z-1310082" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103938</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252736-sc-2012-03-13T13:22:40Z-1310082</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609046</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#16" center_name="SC" accession="ERX113625"> <IDENTIFIERS> <PRIMARY_ID>ERX113625</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#16</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609034, constructed from sample accession ERS103939 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TCCGTCTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103939" refname="2042STDY5252737-sc-2012-03-13T13:22:40Z-1310083" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103939</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252737-sc-2012-03-13T13:22:40Z-1310083</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609034</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#17" center_name="SC" accession="ERX113626"> <IDENTIFIERS> <PRIMARY_ID>ERX113626</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#17</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609117, constructed from sample accession ERS103940 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TGTACCTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103940" refname="2042STDY5252738-sc-2012-03-13T13:22:42Z-1310084" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103940</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252738-sc-2012-03-13T13:22:42Z-1310084</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609117</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#18" center_name="SC" accession="ERX113627"> <IDENTIFIERS> <PRIMARY_ID>ERX113627</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#18</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609105, constructed from sample accession ERS103941 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TTCTGTGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103941" refname="2042STDY5252739-sc-2012-03-13T13:22:43Z-1310085" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103941</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252739-sc-2012-03-13T13:22:43Z-1310085</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609105</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#19" center_name="SC" accession="ERX113628"> <IDENTIFIERS> <PRIMARY_ID>ERX113628</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#19</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609093, constructed from sample accession ERS103946 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TCTGCTGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103946" refname="2042STDY5252740-sc-2012-03-13T13:22:47Z-1310090" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103946</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252740-sc-2012-03-13T13:22:47Z-1310090</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609093</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#20" center_name="SC" accession="ERX113629"> <IDENTIFIERS> <PRIMARY_ID>ERX113629</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#20</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609081, constructed from sample accession ERS103949 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TTGGAGGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103949" refname="2042STDY5252741-sc-2012-03-13T13:22:49Z-1310093" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103949</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252741-sc-2012-03-13T13:22:49Z-1310093</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609081</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#21" center_name="SC" accession="ERX113630"> <IDENTIFIERS> <PRIMARY_ID>ERX113630</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#21</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609069, constructed from sample accession ERS103951 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TCGAGCGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103951" refname="2042STDY5252742-sc-2012-03-13T13:22:51Z-1310095" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103951</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252742-sc-2012-03-13T13:22:51Z-1310095</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609069</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#22" center_name="SC" accession="ERX113631"> <IDENTIFIERS> <PRIMARY_ID>ERX113631</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#22</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609057, constructed from sample accession ERS103952 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TGATACGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103952" refname="2042STDY5252743-sc-2012-03-13T13:22:52Z-1310096" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103952</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252743-sc-2012-03-13T13:22:52Z-1310096</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609057</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#23" center_name="SC" accession="ERX113632"> <IDENTIFIERS> <PRIMARY_ID>ERX113632</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#23</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609045, constructed from sample accession ERS103953 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TGCATAGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103953" refname="2042STDY5252744-sc-2012-03-13T13:22:53Z-1310097" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103953</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252744-sc-2012-03-13T13:22:53Z-1310097</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609045</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#24" center_name="SC" accession="ERX113633"> <IDENTIFIERS> <PRIMARY_ID>ERX113633</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#24</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609033, constructed from sample accession ERS103954 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TTGACTCT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103954" refname="2042STDY5252745-sc-2012-03-13T13:22:54Z-1310098" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103954</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252745-sc-2012-03-13T13:22:54Z-1310098</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609033</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#25" center_name="SC" accession="ERX113634"> <IDENTIFIERS> <PRIMARY_ID>ERX113634</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#25</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609116, constructed from sample accession ERS103955 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TGCGATCT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103955" refname="2042STDY5252746-sc-2012-03-13T13:22:54Z-1310099" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103955</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252746-sc-2012-03-13T13:22:54Z-1310099</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609116</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#26" center_name="SC" accession="ERX113635"> <IDENTIFIERS> <PRIMARY_ID>ERX113635</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#26</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609104, constructed from sample accession ERS103956 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TTCCTGCT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103956" refname="2042STDY5252747-sc-2012-03-13T13:22:55Z-1310100" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103956</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252747-sc-2012-03-13T13:22:55Z-1310100</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609104</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#27" center_name="SC" accession="ERX113636"> <IDENTIFIERS> <PRIMARY_ID>ERX113636</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#27</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609092, constructed from sample accession ERS103958 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TAGTGACT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103958" refname="2042STDY5252748-sc-2012-03-13T13:22:57Z-1310102" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103958</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252748-sc-2012-03-13T13:22:57Z-1310102</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609092</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#28" center_name="SC" accession="ERX113637"> <IDENTIFIERS> <PRIMARY_ID>ERX113637</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#28</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609080, constructed from sample accession ERS103961 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TACAGGAT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103961" refname="2042STDY5252749-sc-2012-03-13T13:23:00Z-1310105" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103961</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252749-sc-2012-03-13T13:23:00Z-1310105</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609080</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#29" center_name="SC" accession="ERX113638"> <IDENTIFIERS> <PRIMARY_ID>ERX113638</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#29</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609068, constructed from sample accession ERS103963 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TCCTCAAT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103963" refname="2042STDY5252750-sc-2012-03-13T13:23:02Z-1310107" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103963</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252750-sc-2012-03-13T13:23:02Z-1310107</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609068</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#30" center_name="SC" accession="ERX113639"> <IDENTIFIERS> <PRIMARY_ID>ERX113639</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#30</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609056, constructed from sample accession ERS103965 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TGTGGTTG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103965" refname="2042STDY5252751-sc-2012-03-13T13:23:03Z-1310109" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103965</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252751-sc-2012-03-13T13:23:03Z-1310109</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609056</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#31" center_name="SC" accession="ERX113640"> <IDENTIFIERS> <PRIMARY_ID>ERX113640</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#31</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609044, constructed from sample accession ERS103967 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TAGTCTTG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103967" refname="2042STDY5252752-sc-2012-03-13T13:23:05Z-1310111" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103967</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252752-sc-2012-03-13T13:23:05Z-1310111</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609044</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#32" center_name="SC" accession="ERX113641"> <IDENTIFIERS> <PRIMARY_ID>ERX113641</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#32</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609032, constructed from sample accession ERS103969 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TTCCATTG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103969" refname="2042STDY5252753-sc-2012-03-13T13:23:06Z-1310113" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103969</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252753-sc-2012-03-13T13:23:06Z-1310113</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609032</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#33" center_name="SC" accession="ERX113642"> <IDENTIFIERS> <PRIMARY_ID>ERX113642</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#33</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609115, constructed from sample accession ERS103970 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TCGAAGTG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103970" refname="2042STDY5252754-sc-2012-03-13T13:23:07Z-1310114" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103970</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252754-sc-2012-03-13T13:23:07Z-1310114</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609115</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#34" center_name="SC" accession="ERX113643"> <IDENTIFIERS> <PRIMARY_ID>ERX113643</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#34</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609103, constructed from sample accession ERS103974 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TAACGCTG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103974" refname="2042STDY5252755-sc-2012-03-13T13:23:10Z-1310118" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103974</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252755-sc-2012-03-13T13:23:10Z-1310118</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609103</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#35" center_name="SC" accession="ERX113644"> <IDENTIFIERS> <PRIMARY_ID>ERX113644</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#35</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609091, constructed from sample accession ERS103976 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TTGGTATG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103976" refname="2042STDY5252756-sc-2012-03-13T13:23:12Z-1310120" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103976</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252756-sc-2012-03-13T13:23:12Z-1310120</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609091</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#36" center_name="SC" accession="ERX113645"> <IDENTIFIERS> <PRIMARY_ID>ERX113645</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#36</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609079, constructed from sample accession ERS103977 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TGAACTGG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103977" refname="2042STDY5252757-sc-2012-03-13T13:23:13Z-1310121" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103977</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252757-sc-2012-03-13T13:23:13Z-1310121</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609079</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#37" center_name="SC" accession="ERX113646"> <IDENTIFIERS> <PRIMARY_ID>ERX113646</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#37</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609067, constructed from sample accession ERS103979 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TACTTCGG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103979" refname="2042STDY5252758-sc-2012-03-13T13:23:15Z-1310123" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103979</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252758-sc-2012-03-13T13:23:15Z-1310123</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609067</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#38" center_name="SC" accession="ERX113647"> <IDENTIFIERS> <PRIMARY_ID>ERX113647</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#38</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609055, constructed from sample accession ERS103981 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TCTCACGG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103981" refname="2042STDY5252759-sc-2012-03-13T13:23:16Z-1310125" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103981</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252759-sc-2012-03-13T13:23:16Z-1310125</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609055</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#39" center_name="SC" accession="ERX113648"> <IDENTIFIERS> <PRIMARY_ID>ERX113648</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#39</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609043, constructed from sample accession ERS103982 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TCAGGAGG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103982" refname="2042STDY5252760-sc-2012-03-13T13:23:17Z-1310126" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103982</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252760-sc-2012-03-13T13:23:17Z-1310126</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609043</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#40" center_name="SC" accession="ERX113649"> <IDENTIFIERS> <PRIMARY_ID>ERX113649</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#40</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609031, constructed from sample accession ERS103983 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TAAGTTCG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103983" refname="2042STDY5252761-sc-2012-03-13T13:23:18Z-1310127" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103983</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252761-sc-2012-03-13T13:23:18Z-1310127</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609031</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#41" center_name="SC" accession="ERX113650"> <IDENTIFIERS> <PRIMARY_ID>ERX113650</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#41</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609114, constructed from sample accession ERS103984 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TCCAGTCG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103984" refname="2042STDY5252762-sc-2012-03-13T13:23:19Z-1310128" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103984</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252762-sc-2012-03-13T13:23:19Z-1310128</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609114</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#42" center_name="SC" accession="ERX113651"> <IDENTIFIERS> <PRIMARY_ID>ERX113651</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#42</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609102, constructed from sample accession ERS103991 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TGTATGCG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103991" refname="2042STDY5252763-sc-2012-03-13T13:23:25Z-1310135" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103991</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252763-sc-2012-03-13T13:23:25Z-1310135</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609102</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#43" center_name="SC" accession="ERX113652"> <IDENTIFIERS> <PRIMARY_ID>ERX113652</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#43</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609090, constructed from sample accession ERS103993 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TCATTGAG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103993" refname="2042STDY5252764-sc-2012-03-13T13:23:27Z-1310137" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103993</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252764-sc-2012-03-13T13:23:27Z-1310137</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609090</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> </EXPERIMENT

ERX113653 SC_EXP_7790_4#44 <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609078, constructed from sample accession ERS103994 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TGGCTCAG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103994" refname="2042STDY5252765-sc-2012-03-13T13:23:28Z-1310138" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103994</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252765-sc-2012-03-13T13:23:28Z-1310138</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609078</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#45" center_name="SC" accession="ERX113654"> <IDENTIFIERS> <PRIMARY_ID>ERX113654</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#45</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609066, constructed from sample accession ERS103995 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TATGCCAG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103995" refname="2042STDY5252766-sc-2012-03-13T13:23:28Z-1310139" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103995</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252766-sc-2012-03-13T13:23:28Z-1310139</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609066</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#46" center_name="SC" accession="ERX113655"> <IDENTIFIERS> <PRIMARY_ID>ERX113655</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#46</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609054, constructed from sample accession ERS103996 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TCAGATTC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103996" refname="2042STDY5252767-sc-2012-03-13T13:23:29Z-1310140" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103996</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252767-sc-2012-03-13T13:23:29Z-1310140</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609054</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#47" center_name="SC" accession="ERX113656"> <IDENTIFIERS> <PRIMARY_ID>ERX113656</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#47</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609042, constructed from sample accession ERS103997 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TACTAGTC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103997" refname="2042STDY5252768-sc-2012-03-13T13:23:30Z-1310141" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103997</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252768-sc-2012-03-13T13:23:30Z-1310141</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609042</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#48" center_name="SC" accession="ERX113657"> <IDENTIFIERS> <PRIMARY_ID>ERX113657</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#48</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609030, constructed from sample accession ERS103913 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TTCAGCTC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103913" refname="2042STDY5252794-sc-2012-03-13T13:22:20Z-1310057" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103913</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252794-sc-2012-03-13T13:22:20Z-1310057</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609030</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#49" center_name="SC" accession="ERX113658"> <IDENTIFIERS> <PRIMARY_ID>ERX113658</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#49</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609113, constructed from sample accession ERS103914 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TGTCTATC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103914" refname="2042STDY5252795-sc-2012-03-13T13:22:20Z-1310058" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103914</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252795-sc-2012-03-13T13:22:20Z-1310058</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609113</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#50" center_name="SC" accession="ERX113659"> <IDENTIFIERS> <PRIMARY_ID>ERX113659</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#50</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609101, constructed from sample accession ERS103915 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TATGTGGC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103915" refname="2042STDY5252796-sc-2012-03-13T13:22:21Z-1310059" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103915</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252796-sc-2012-03-13T13:22:21Z-1310059</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609101</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#51" center_name="SC" accession="ERX113660"> <IDENTIFIERS> <PRIMARY_ID>ERX113660</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#51</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609089, constructed from sample accession ERS103916 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TTACTCGC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103916" refname="2042STDY5252797-sc-2012-03-13T13:22:22Z-1310060" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103916</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252797-sc-2012-03-13T13:22:22Z-1310060</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609089</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#52" center_name="SC" accession="ERX113661"> <IDENTIFIERS> <PRIMARY_ID>ERX113661</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#52</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609077, constructed from sample accession ERS103917 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TCGTTAGC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103917" refname="2042STDY5252798-sc-2012-03-13T13:22:22Z-1310061" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103917</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252798-sc-2012-03-13T13:22:22Z-1310061</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609077</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#53" center_name="SC" accession="ERX113662"> <IDENTIFIERS> <PRIMARY_ID>ERX113662</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#53</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609065, constructed from sample accession ERS103920 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TACCGAGC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103920" refname="2042STDY5252799-sc-2012-03-13T13:22:25Z-1310064" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103920</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252799-sc-2012-03-13T13:22:25Z-1310064</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609065</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#54" center_name="SC" accession="ERX113663"> <IDENTIFIERS> <PRIMARY_ID>ERX113663</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#54</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609053, constructed from sample accession ERS103921 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TGTTCTCC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103921" refname="2042STDY5252800-sc-2012-03-13T13:22:26Z-1310065" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103921</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252800-sc-2012-03-13T13:22:26Z-1310065</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609053</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#55" center_name="SC" accession="ERX113664"> <IDENTIFIERS> <PRIMARY_ID>ERX113664</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#55</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609041, constructed from sample accession ERS103927 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TTCGCACC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103927" refname="2042STDY5252801-sc-2012-03-13T13:22:31Z-1310071" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103927</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252801-sc-2012-03-13T13:22:31Z-1310071</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609041</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#56" center_name="SC" accession="ERX113665"> <IDENTIFIERS> <PRIMARY_ID>ERX113665</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#56</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609029, constructed from sample accession ERS103928 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TTGCGTAC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103928" refname="2042STDY5252802-sc-2012-03-13T13:22:32Z-1310072" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103928</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252802-sc-2012-03-13T13:22:32Z-1310072</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609029</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#57" center_name="SC" accession="ERX113666"> <IDENTIFIERS> <PRIMARY_ID>ERX113666</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#57</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609112, constructed from sample accession ERS103929 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TCTACGAC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103929" refname="2042STDY5252803-sc-2012-03-13T13:22:32Z-1310073" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103929</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252803-sc-2012-03-13T13:22:32Z-1310073</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609112</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#58" center_name="SC" accession="ERX113667"> <IDENTIFIERS> <PRIMARY_ID>ERX113667</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#58</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609100, constructed from sample accession ERS103930 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TGACAGAC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103930" refname="2042STDY5252804-sc-2012-03-13T13:22:33Z-1310074" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103930</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252804-sc-2012-03-13T13:22:33Z-1310074</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609100</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#1" center_name="SC" accession="ERX113515"> <IDENTIFIERS> <PRIMARY_ID>ERX113515</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#1</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589546, constructed from sample accession ERS103815 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence ATCACGTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103815" refname="2042STDY5252554-sc-2012-03-13T13:20:52Z-1309911" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103815</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252554-sc-2012-03-13T13:20:52Z-1309911</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589546</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#2" center_name="SC" accession="ERX113516"> <IDENTIFIERS> <PRIMARY_ID>ERX113516</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#2</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589534, constructed from sample accession ERS103816 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence CGATGTTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103816" refname="2042STDY5252555-sc-2012-03-13T13:20:53Z-1309912" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103816</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252555-sc-2012-03-13T13:20:53Z-1309912</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589534</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#3" center_name="SC" accession="ERX113517"> <IDENTIFIERS> <PRIMARY_ID>ERX113517</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#3</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589522, constructed from sample accession ERS103817 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TTAGGCAT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103817" refname="2042STDY5252556-sc-2012-03-13T13:20:54Z-1309914" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103817</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252556-sc-2012-03-13T13:20:54Z-1309914</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589522</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#4" center_name="SC" accession="ERX113518"> <IDENTIFIERS> <PRIMARY_ID>ERX113518</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#4</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589510, constructed from sample accession ERS103818 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TGACCACT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103818" refname="2042STDY5252557-sc-2012-03-13T13:20:55Z-1309916" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103818</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252557-sc-2012-03-13T13:20:55Z-1309916</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589510</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#5" center_name="SC" accession="ERX113519"> <IDENTIFIERS> <PRIMARY_ID>ERX113519</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#5</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589498, constructed from sample accession ERS103819 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence ACAGTGGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103819" refname="2042STDY5252558-sc-2012-03-13T13:20:56Z-1309918" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103819</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252558-sc-2012-03-13T13:20:56Z-1309918</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589498</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#6" center_name="SC" accession="ERX113520"> <IDENTIFIERS> <PRIMARY_ID>ERX113520</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#6</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589486, constructed from sample accession ERS103820 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence GCCAATGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103820" refname="2042STDY5252559-sc-2012-03-13T13:20:57Z-1309920" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103820</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252559-sc-2012-03-13T13:20:57Z-1309920</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589486</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#7" center_name="SC" accession="ERX113521"> <IDENTIFIERS> <PRIMARY_ID>ERX113521</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#7</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589474, constructed from sample accession ERS103821 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence CAGATCTG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103821" refname="2042STDY5252560-sc-2012-03-13T13:20:57Z-1309922" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103821</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252560-sc-2012-03-13T13:20:57Z-1309922</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589474</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#8" center_name="SC" accession="ERX113522"> <IDENTIFIERS> <PRIMARY_ID>ERX113522</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#8</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589462, constructed from sample accession ERS103822 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence ACTTGATG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103822" refname="2042STDY5252561-sc-2012-03-13T13:20:59Z-1309924" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103822</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252561-sc-2012-03-13T13:20:59Z-1309924</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589462</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#9" center_name="SC" accession="ERX113523"> <IDENTIFIERS> <PRIMARY_ID>ERX113523</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#9</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589545, constructed from sample accession ERS103823 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence GATCAGCG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103823" refname="2042STDY5252562-sc-2012-03-13T13:20:59Z-1309926" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103823</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252562-sc-2012-03-13T13:20:59Z-1309926</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589545</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#10" center_name="SC" accession="ERX113524"> <IDENTIFIERS> <PRIMARY_ID>ERX113524</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#10</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589533, constructed from sample accession ERS103824 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TAGCTTGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103824" refname="2042STDY5252563-sc-2012-03-13T13:21:00Z-1309927" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103824</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252563-sc-2012-03-13T13:21:00Z-1309927</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589533</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#11" center_name="SC" accession="ERX113525"> <IDENTIFIERS> <PRIMARY_ID>ERX113525</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#11</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589521, constructed from sample accession ERS103825 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence GGCTACAG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103825" refname="2042STDY5252564-sc-2012-03-13T13:21:01Z-1309931" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103825</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252564-sc-2012-03-13T13:21:01Z-1309931</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589521</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#12" center_name="SC" accession="ERX113526"> <IDENTIFIERS> <PRIMARY_ID>ERX113526</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#12</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589509, constructed from sample accession ERS103826 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence CTTGTACT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103826" refname="2042STDY5252565-sc-2012-03-13T13:21:02Z-1309933" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103826</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252565-sc-2012-03-13T13:21:02Z-1309933</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589509</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#13" center_name="SC" accession="ERX113527"> <IDENTIFIERS> <PRIMARY_ID>ERX113527</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#13</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589497, constructed from sample accession ERS103827 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TGGTTGTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103827" refname="2042STDY5252566-sc-2012-03-13T13:21:02Z-1309935" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103827</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252566-sc-2012-03-13T13:21:02Z-1309935</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589497</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#14" center_name="SC" accession="ERX113528"> <IDENTIFIERS> <PRIMARY_ID>ERX113528</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#14</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589485, constructed from sample accession ERS103828 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TCTCGGTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103828" refname="2042STDY5252567-sc-2012-03-13T13:21:03Z-1309937" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103828</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252567-sc-2012-03-13T13:21:03Z-1309937</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589485</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#15" center_name="SC" accession="ERX113529"> <IDENTIFIERS> <PRIMARY_ID>ERX113529</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#15</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589473, constructed from sample accession ERS103829 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TAAGCGTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103829" refname="2042STDY5252568-sc-2012-03-13T13:21:04Z-1309939" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103829</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252568-sc-2012-03-13T13:21:04Z-1309939</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589473</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#16" center_name="SC" accession="ERX113530"> <IDENTIFIERS> <PRIMARY_ID>ERX113530</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#16</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589461, constructed from sample accession ERS103830 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TCCGTCTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103830" refname="2042STDY5252569-sc-2012-03-13T13:21:05Z-1309940" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103830</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252569-sc-2012-03-13T13:21:05Z-1309940</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589461</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#17" center_name="SC" accession="ERX113531"> <IDENTIFIERS> <PRIMARY_ID>ERX113531</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#17</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589544, constructed from sample accession ERS103831 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TGTACCTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103831" refname="2042STDY5252570-sc-2012-03-13T13:21:06Z-1309941" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103831</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252570-sc-2012-03-13T13:21:06Z-1309941</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589544</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#18" center_name="SC" accession="ERX113532"> <IDENTIFIERS> <PRIMARY_ID>ERX113532</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#18</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589532, constructed from sample accession ERS103832 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TTCTGTGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103832" refname="2042STDY5252571-sc-2012-03-13T13:21:07Z-1309942" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103832</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252571-sc-2012-03-13T13:21:07Z-1309942</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589532</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#19" center_name="SC" accession="ERX113533"> <IDENTIFIERS> <PRIMARY_ID>ERX113533</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#19</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589520, constructed from sample accession ERS103833 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TCTGCTGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103833" refname="2042STDY5252572-sc-2012-03-13T13:21:08Z-1309945" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103833</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252572-sc-2012-03-13T13:21:08Z-1309945</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589520</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#20" center_name="SC" accession="ERX113534"> <IDENTIFIERS> <PRIMARY_ID>ERX113534</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#20</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589508, constructed from sample accession ERS103834 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TTGGAGGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103834" refname="2042STDY5252573-sc-2012-03-13T13:21:08Z-1309947" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103834</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252573-sc-2012-03-13T13:21:08Z-1309947</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589508</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#21" center_name="SC" accession="ERX113535"> <IDENTIFIERS> <PRIMARY_ID>ERX113535</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#21</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589496, constructed from sample accession ERS103835 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TCGAGCGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103835" refname="2042STDY5252574-sc-2012-03-13T13:21:09Z-1309949" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103835</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252574-sc-2012-03-13T13:21:09Z-1309949</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589496</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#22" center_name="SC" accession="ERX113536"> <IDENTIFIERS> <PRIMARY_ID>ERX113536</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#22</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589484, constructed from sample accession ERS103836 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TGATACGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103836" refname="2042STDY5252575-sc-2012-03-13T13:21:10Z-1309951" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103836</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252575-sc-2012-03-13T13:21:10Z-1309951</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589484</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#23" center_name="SC" accession="ERX113537"> <IDENTIFIERS> <PRIMARY_ID>ERX113537</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#23</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589472, constructed from sample accession ERS103837 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TGCATAGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103837" refname="2042STDY5252576-sc-2012-03-13T13:21:11Z-1309953" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103837</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252576-sc-2012-03-13T13:21:11Z-1309953</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589472</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#24" center_name="SC" accession="ERX113538"> <IDENTIFIERS> <PRIMARY_ID>ERX113538</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#24</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589460, constructed from sample accession ERS103838 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TTGACTCT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103838" refname="2042STDY5252674-sc-2012-03-13T13:21:12Z-1309982" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103838</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252674-sc-2012-03-13T13:21:12Z-1309982</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589460</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#25" center_name="SC" accession="ERX113539"> <IDENTIFIERS> <PRIMARY_ID>ERX113539</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#25</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589543, constructed from sample accession ERS103839 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TGCGATCT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103839" refname="2042STDY5252675-sc-2012-03-13T13:21:12Z-1309983" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103839</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252675-sc-2012-03-13T13:21:12Z-1309983</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589543</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#26" center_name="SC" accession="ERX113540"> <IDENTIFIERS> <PRIMARY_ID>ERX113540</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#26</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589531, constructed from sample accession ERS103840 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TTCCTGCT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103840" refname="2042STDY5252676-sc-2012-03-13T13:21:13Z-1309984" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103840</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252676-sc-2012-03-13T13:21:13Z-1309984</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589531</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#59" center_name="SC" accession="ERX113668"> <IDENTIFIERS> <PRIMARY_ID>ERX113668</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#59</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609088, constructed from sample accession ERS103932 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TAGAACAC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103932" refname="2042STDY5252805-sc-2012-03-13T13:22:35Z-1310076" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103932</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252805-sc-2012-03-13T13:22:35Z-1310076</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609088</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#60" center_name="SC" accession="ERX113669"> <IDENTIFIERS> <PRIMARY_ID>ERX113669</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#60</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609076, constructed from sample accession ERS103934 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TCATCCTA.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103934" refname="2042STDY5252806-sc-2012-03-13T13:22:36Z-1310078" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103934</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252806-sc-2012-03-13T13:22:36Z-1310078</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609076</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#61" center_name="SC" accession="ERX113670"> <IDENTIFIERS> <PRIMARY_ID>ERX113670</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#61</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609064, constructed from sample accession ERS103935 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TGCTGATA.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103935" refname="2042STDY5252807-sc-2012-03-13T13:22:37Z-1310079" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103935</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252807-sc-2012-03-13T13:22:37Z-1310079</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609064</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#62" center_name="SC" accession="ERX113671"> <IDENTIFIERS> <PRIMARY_ID>ERX113671</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#62</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609052, constructed from sample accession ERS103942 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TAGACGGA.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103942" refname="2042STDY5252808-sc-2012-03-13T13:22:44Z-1310086" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103942</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252808-sc-2012-03-13T13:22:44Z-1310086</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609052</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#63" center_name="SC" accession="ERX113672"> <IDENTIFIERS> <PRIMARY_ID>ERX113672</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#63</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609040, constructed from sample accession ERS103943 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TGTGAAGA.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103943" refname="2042STDY5252809-sc-2012-03-13T13:22:45Z-1310087" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103943</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252809-sc-2012-03-13T13:22:45Z-1310087</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609040</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#64" center_name="SC" accession="ERX113673"> <IDENTIFIERS> <PRIMARY_ID>ERX113673</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#64</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609028, constructed from sample accession ERS103944 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TCTCTTCA.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103944" refname="2042STDY5252810-sc-2012-03-13T13:22:45Z-1310088" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103944</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252810-sc-2012-03-13T13:22:45Z-1310088</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609028</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#65" center_name="SC" accession="ERX113674"> <IDENTIFIERS> <PRIMARY_ID>ERX113674</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#65</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609111, constructed from sample accession ERS103945 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TTGTTCCA.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103945" refname="2042STDY5252811-sc-2012-03-13T13:22:46Z-1310089" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103945</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252811-sc-2012-03-13T13:22:46Z-1310089</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609111</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#66" center_name="SC" accession="ERX113675"> <IDENTIFIERS> <PRIMARY_ID>ERX113675</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#66</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609099, constructed from sample accession ERS103947 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TGAAGCCA.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103947" refname="2042STDY5252812-sc-2012-03-13T13:22:48Z-1310091" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103947</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252812-sc-2012-03-13T13:22:48Z-1310091</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609099</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#67" center_name="SC" accession="ERX113676"> <IDENTIFIERS> <PRIMARY_ID>ERX113676</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#67</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609087, constructed from sample accession ERS103948 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TACCACCA.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103948" refname="2042STDY5252813-sc-2012-03-13T13:22:48Z-1310092" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103948</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252813-sc-2012-03-13T13:22:48Z-1310092</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609087</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#68" center_name="SC" accession="ERX113677"> <IDENTIFIERS> <PRIMARY_ID>ERX113677</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#68</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609075, constructed from sample accession ERS103950 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TGCGTGAA.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103950" refname="2042STDY5252814-sc-2012-03-13T13:22:50Z-1310094" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103950</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252814-sc-2012-03-13T13:22:50Z-1310094</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609075</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#69" center_name="SC" accession="ERX113678"> <IDENTIFIERS> <PRIMARY_ID>ERX113678</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#69</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609063, constructed from sample accession ERS103957 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence GGTGAGTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103957" refname="2042STDY5252815-sc-2012-03-13T13:22:57Z-1310101" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103957</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252815-sc-2012-03-13T13:22:57Z-1310101</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609063</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#70" center_name="SC" accession="ERX113679"> <IDENTIFIERS> <PRIMARY_ID>ERX113679</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#70</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609051, constructed from sample accession ERS103959 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence GATCTCTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103959" refname="2042STDY5252816-sc-2012-03-13T13:22:59Z-1310103" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103959</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252816-sc-2012-03-13T13:22:59Z-1310103</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609051</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#71" center_name="SC" accession="ERX113680"> <IDENTIFIERS> <PRIMARY_ID>ERX113680</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#71</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609039, constructed from sample accession ERS103960 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence GTGTCCTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103960" refname="2042STDY5252817-sc-2012-03-13T13:22:59Z-1310104" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103960</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252817-sc-2012-03-13T13:22:59Z-1310104</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609039</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#72" center_name="SC" accession="ERX113681"> <IDENTIFIERS> <PRIMARY_ID>ERX113681</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#72</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609027, constructed from sample accession ERS103962 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence GACGGATT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103962" refname="2042STDY5252818-sc-2012-03-13T13:23:01Z-1310106" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103962</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252818-sc-2012-03-13T13:23:01Z-1310106</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609027</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#73" center_name="SC" accession="ERX113682"> <IDENTIFIERS> <PRIMARY_ID>ERX113682</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#73</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609110, constructed from sample accession ERS103964 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence GCAACATT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103964" refname="2042STDY5252819-sc-2012-03-13T13:23:02Z-1310108" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103964</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252819-sc-2012-03-13T13:23:02Z-1310108</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609110</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#74" center_name="SC" accession="ERX113683"> <IDENTIFIERS> <PRIMARY_ID>ERX113683</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#74</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609098, constructed from sample accession ERS103966 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence GGTCGTGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103966" refname="2042STDY5252820-sc-2012-03-13T13:23:04Z-1310110" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103966</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252820-sc-2012-03-13T13:23:04Z-1310110</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609098</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#75" center_name="SC" accession="ERX113684"> <IDENTIFIERS> <PRIMARY_ID>ERX113684</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#75</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609086, constructed from sample accession ERS103968 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence GAATCTGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103968" refname="2042STDY5252821-sc-2012-03-13T13:23:06Z-1310112" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103968</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252821-sc-2012-03-13T13:23:06Z-1310112</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609086</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#76" center_name="SC" accession="ERX113685"> <IDENTIFIERS> <PRIMARY_ID>ERX113685</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#76</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609074, constructed from sample accession ERS103971 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence GTACATCT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103971" refname="2042STDY5252822-sc-2012-03-13T13:23:08Z-1310115" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103971</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252822-sc-2012-03-13T13:23:08Z-1310115</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609074</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#77" center_name="SC" accession="ERX113686"> <IDENTIFIERS> <PRIMARY_ID>ERX113686</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#77</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609062, constructed from sample accession ERS103972 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence GAGGTGCT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103972" refname="2042STDY5252823-sc-2012-03-13T13:23:09Z-1310116" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103972</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252823-sc-2012-03-13T13:23:09Z-1310116</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609062</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#78" center_name="SC" accession="ERX113687"> <IDENTIFIERS> <PRIMARY_ID>ERX113687</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#78</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609050, constructed from sample accession ERS103973 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence GCATGGCT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103973" refname="2042STDY5252824-sc-2012-03-13T13:23:10Z-1310117" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103973</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252824-sc-2012-03-13T13:23:10Z-1310117</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609050</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#79" center_name="SC" accession="ERX113688"> <IDENTIFIERS> <PRIMARY_ID>ERX113688</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#79</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609038, constructed from sample accession ERS103975 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence GTTAGCCT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103975" refname="2042STDY5252825-sc-2012-03-13T13:23:12Z-1310119" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103975</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252825-sc-2012-03-13T13:23:12Z-1310119</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609038</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#80" center_name="SC" accession="ERX113689"> <IDENTIFIERS> <PRIMARY_ID>ERX113689</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#80</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609026, constructed from sample accession ERS103978 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence GTCGCTAT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103978" refname="2042STDY5252826-sc-2012-03-13T13:23:14Z-1310122" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103978</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252826-sc-2012-03-13T13:23:14Z-1310122</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609026</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#81" center_name="SC" accession="ERX113690"> <IDENTIFIERS> <PRIMARY_ID>ERX113690</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#81</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609109, constructed from sample accession ERS103980 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence GGAATGAT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103980" refname="2042STDY5252827-sc-2012-03-13T13:23:16Z-1310124" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103980</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252827-sc-2012-03-13T13:23:16Z-1310124</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609109</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#82" center_name="SC" accession="ERX113691"> <IDENTIFIERS> <PRIMARY_ID>ERX113691</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#82</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609097, constructed from sample accession ERS103985 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence GAGCCAAT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103985" refname="2042STDY5252828-sc-2012-03-13T13:23:20Z-1310129" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103985</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252828-sc-2012-03-13T13:23:20Z-1310129</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609097</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#83" center_name="SC" accession="ERX113692"> <IDENTIFIERS> <PRIMARY_ID>ERX113692</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#83</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609085, constructed from sample accession ERS103986 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence GCTCCTTG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103986" refname="2042STDY5252829-sc-2012-03-13T13:23:20Z-1310130" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103986</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252829-sc-2012-03-13T13:23:20Z-1310130</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609085</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#84" center_name="SC" accession="ERX113693"> <IDENTIFIERS> <PRIMARY_ID>ERX113693</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#84</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609073, constructed from sample accession ERS103987 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence GTAAGGTG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103987" refname="2042STDY5252830-sc-2012-03-13T13:23:22Z-1310131" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103987</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252830-sc-2012-03-13T13:23:22Z-1310131</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609073</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#85" center_name="SC" accession="ERX113694"> <IDENTIFIERS> <PRIMARY_ID>ERX113694</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#85</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609061, constructed from sample accession ERS103988 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence GAGGATGG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103988" refname="2042STDY5252831-sc-2012-03-13T13:23:22Z-1310132" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103988</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252831-sc-2012-03-13T13:23:22Z-1310132</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609061</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#86" center_name="SC" accession="ERX113695"> <IDENTIFIERS> <PRIMARY_ID>ERX113695</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#86</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609049, constructed from sample accession ERS103989 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence GTTGTCGG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103989" refname="2042STDY5252832-sc-2012-03-13T13:23:23Z-1310133" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103989</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252832-sc-2012-03-13T13:23:23Z-1310133</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609049</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#87" center_name="SC" accession="ERX113696"> <IDENTIFIERS> <PRIMARY_ID>ERX113696</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#87</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609037, constructed from sample accession ERS103990 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence GGATTAGG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103990" refname="2042STDY5252833-sc-2012-03-13T13:23:24Z-1310134" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103990</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252833-sc-2012-03-13T13:23:24Z-1310134</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609037</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#88" center_name="SC" accession="ERX113697"> <IDENTIFIERS> <PRIMARY_ID>ERX113697</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#88</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609025, constructed from sample accession ERS103992 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence GATAGAGG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103992" refname="2042STDY5252834-sc-2012-03-13T13:23:26Z-1310136" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103992</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252834-sc-2012-03-13T13:23:26Z-1310136</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609025</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#89" center_name="SC" accession="ERX113698"> <IDENTIFIERS> <PRIMARY_ID>ERX113698</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#89</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609108, constructed from sample accession ERS103998 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence GTGTGTCG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103998" refname="2042STDY5252835-sc-2012-03-13T13:23:31Z-1310143" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103998</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252835-sc-2012-03-13T13:23:31Z-1310143</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609108</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#90" center_name="SC" accession="ERX113699"> <IDENTIFIERS> <PRIMARY_ID>ERX113699</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#90</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609096, constructed from sample accession ERS103999 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence GCAATCCG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103999" refname="2042STDY5252836-sc-2012-03-13T13:23:32Z-1310144" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103999</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252836-sc-2012-03-13T13:23:32Z-1310144</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609096</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#91" center_name="SC" accession="ERX113700"> <IDENTIFIERS> <PRIMARY_ID>ERX113700</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#91</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609084, constructed from sample accession ERS104000 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence GACCTTAG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104000" refname="2042STDY5252837-sc-2012-03-13T13:23:33Z-1310145" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104000</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252837-sc-2012-03-13T13:23:33Z-1310145</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609084</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#92" center_name="SC" accession="ERX113701"> <IDENTIFIERS> <PRIMARY_ID>ERX113701</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#92</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609072, constructed from sample accession ERS104001 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence GCCTGTTC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104001" refname="2042STDY5252838-sc-2012-03-13T13:23:34Z-1310146" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104001</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252838-sc-2012-03-13T13:23:34Z-1310146</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609072</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#93" center_name="SC" accession="ERX113702"> <IDENTIFIERS> <PRIMARY_ID>ERX113702</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#93</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609060, constructed from sample accession ERS104002 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence GCACTGTC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104002" refname="2042STDY5252839-sc-2012-03-13T13:23:34Z-1310147" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104002</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252839-sc-2012-03-13T13:23:34Z-1310147</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609060</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#94" center_name="SC" accession="ERX113703"> <IDENTIFIERS> <PRIMARY_ID>ERX113703</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#94</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609048, constructed from sample accession ERS104003 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence GCTAACTC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104003" refname="2042STDY5252840-sc-2012-03-13T13:23:35Z-1310148" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104003</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252840-sc-2012-03-13T13:23:35Z-1310148</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609048</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#95" center_name="SC" accession="ERX113704"> <IDENTIFIERS> <PRIMARY_ID>ERX113704</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#95</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609036, constructed from sample accession ERS104004 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence GATTCATC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104004" refname="2042STDY5252841-sc-2012-03-13T13:23:36Z-1310149" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104004</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252841-sc-2012-03-13T13:23:36Z-1310149</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609036</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#1" center_name="SC" accession="ERX113705"> <IDENTIFIERS> <PRIMARY_ID>ERX113705</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#1</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587703, constructed from sample accession ERS104005 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence ATCACGTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104005" refname="2042STDY5252842-sc-2012-03-13T13:23:37Z-1310150" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104005</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252842-sc-2012-03-13T13:23:37Z-1310150</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587703</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#2" center_name="SC" accession="ERX113706"> <IDENTIFIERS> <PRIMARY_ID>ERX113706</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#2</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587691, constructed from sample accession ERS104006 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence CGATGTTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104006" refname="2042STDY5252843-sc-2012-03-13T13:23:38Z-1310151" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104006</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252843-sc-2012-03-13T13:23:38Z-1310151</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587691</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#3" center_name="SC" accession="ERX113707"> <IDENTIFIERS> <PRIMARY_ID>ERX113707</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#3</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587679, constructed from sample accession ERS104007 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TTAGGCAT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104007" refname="2042STDY5252844-sc-2012-03-13T13:23:39Z-1310152" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104007</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252844-sc-2012-03-13T13:23:39Z-1310152</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587679</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#4" center_name="SC" accession="ERX113708"> <IDENTIFIERS> <PRIMARY_ID>ERX113708</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#4</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587667, constructed from sample accession ERS104008 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TGACCACT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104008" refname="2042STDY5252845-sc-2012-03-13T13:23:40Z-1310153" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104008</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252845-sc-2012-03-13T13:23:40Z-1310153</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587667</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#5" center_name="SC" accession="ERX113709"> <IDENTIFIERS> <PRIMARY_ID>ERX113709</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#5</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587655, constructed from sample accession ERS104009 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence ACAGTGGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104009" refname="2042STDY5252846-sc-2012-03-13T13:23:41Z-1310154" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104009</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252846-sc-2012-03-13T13:23:41Z-1310154</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587655</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#6" center_name="SC" accession="ERX113710"> <IDENTIFIERS> <PRIMARY_ID>ERX113710</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#6</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587643, constructed from sample accession ERS104010 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence GCCAATGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104010" refname="2042STDY5252847-sc-2012-03-13T13:23:42Z-1310155" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104010</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252847-sc-2012-03-13T13:23:42Z-1310155</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587643</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#7" center_name="SC" accession="ERX113711"> <IDENTIFIERS> <PRIMARY_ID>ERX113711</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#7</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587631, constructed from sample accession ERS104011 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence CAGATCTG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104011" refname="2042STDY5252848-sc-2012-03-13T13:23:43Z-1310156" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104011</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252848-sc-2012-03-13T13:23:43Z-1310156</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587631</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#8" center_name="SC" accession="ERX113712"> <IDENTIFIERS> <PRIMARY_ID>ERX113712</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#8</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587619, constructed from sample accession ERS104012 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence ACTTGATG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104012" refname="2042STDY5252849-sc-2012-03-13T13:23:43Z-1310157" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104012</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252849-sc-2012-03-13T13:23:43Z-1310157</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587619</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#9" center_name="SC" accession="ERX113713"> <IDENTIFIERS> <PRIMARY_ID>ERX113713</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#9</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587702, constructed from sample accession ERS104013 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence GATCAGCG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104013" refname="2042STDY5252850-sc-2012-03-13T13:23:44Z-1310158" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104013</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252850-sc-2012-03-13T13:23:44Z-1310158</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587702</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#10" center_name="SC" accession="ERX113714"> <IDENTIFIERS> <PRIMARY_ID>ERX113714</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#10</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587690, constructed from sample accession ERS104014 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TAGCTTGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104014" refname="2042STDY5252851-sc-2012-03-13T13:23:45Z-1310159" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104014</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252851-sc-2012-03-13T13:23:45Z-1310159</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587690</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#11" center_name="SC" accession="ERX113715"> <IDENTIFIERS> <PRIMARY_ID>ERX113715</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#11</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587678, constructed from sample accession ERS104015 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence GGCTACAG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104015" refname="2042STDY5252852-sc-2012-03-13T13:23:46Z-1310160" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104015</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252852-sc-2012-03-13T13:23:46Z-1310160</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587678</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#12" center_name="SC" accession="ERX113716"> <IDENTIFIERS> <PRIMARY_ID>ERX113716</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#12</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587666, constructed from sample accession ERS104016 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence CTTGTACT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104016" refname="2042STDY5252853-sc-2012-03-13T13:23:47Z-1310161" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104016</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252853-sc-2012-03-13T13:23:47Z-1310161</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587666</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#13" center_name="SC" accession="ERX113717"> <IDENTIFIERS> <PRIMARY_ID>ERX113717</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#13</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587654, constructed from sample accession ERS104017 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TGGTTGTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104017" refname="2042STDY5252854-sc-2012-03-13T13:23:48Z-1310162" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104017</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252854-sc-2012-03-13T13:23:48Z-1310162</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587654</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#14" center_name="SC" accession="ERX113718"> <IDENTIFIERS> <PRIMARY_ID>ERX113718</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#14</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587642, constructed from sample accession ERS104018 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TCTCGGTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104018" refname="2042STDY5252855-sc-2012-03-13T13:23:49Z-1310163" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104018</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252855-sc-2012-03-13T13:23:49Z-1310163</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587642</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#15" center_name="SC" accession="ERX113719"> <IDENTIFIERS> <PRIMARY_ID>ERX113719</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#15</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587630, constructed from sample accession ERS104019 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TAAGCGTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104019" refname="2042STDY5252856-sc-2012-03-13T13:23:50Z-1310164" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104019</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252856-sc-2012-03-13T13:23:50Z-1310164</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587630</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#16" center_name="SC" accession="ERX113720"> <IDENTIFIERS> <PRIMARY_ID>ERX113720</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#16</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587618, constructed from sample accession ERS104020 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TCCGTCTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104020" refname="2042STDY5252857-sc-2012-03-13T13:23:51Z-1310165" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104020</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252857-sc-2012-03-13T13:23:51Z-1310165</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587618</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#17" center_name="SC" accession="ERX113721"> <IDENTIFIERS> <PRIMARY_ID>ERX113721</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#17</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587701, constructed from sample accession ERS104021 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TGTACCTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104021" refname="2042STDY5252858-sc-2012-03-13T13:23:51Z-1310166" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104021</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252858-sc-2012-03-13T13:23:51Z-1310166</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587701</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#18" center_name="SC" accession="ERX113722"> <IDENTIFIERS> <PRIMARY_ID>ERX113722</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#18</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587689, constructed from sample accession ERS104022 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TTCTGTGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104022" refname="2042STDY5252859-sc-2012-03-13T13:23:52Z-1310167" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104022</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252859-sc-2012-03-13T13:23:52Z-1310167</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587689</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#27" center_name="SC" accession="ERX113541"> <IDENTIFIERS> <PRIMARY_ID>ERX113541</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#27</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589519, constructed from sample accession ERS103841 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TAGTGACT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103841" refname="2042STDY5252677-sc-2012-03-13T13:21:14Z-1309985" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103841</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252677-sc-2012-03-13T13:21:14Z-1309985</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589519</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#28" center_name="SC" accession="ERX113542"> <IDENTIFIERS> <PRIMARY_ID>ERX113542</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#28</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589507, constructed from sample accession ERS103842 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TACAGGAT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103842" refname="2042STDY5252678-sc-2012-03-13T13:21:15Z-1309986" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103842</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252678-sc-2012-03-13T13:21:15Z-1309986</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589507</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#29" center_name="SC" accession="ERX113543"> <IDENTIFIERS> <PRIMARY_ID>ERX113543</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#29</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589495, constructed from sample accession ERS103843 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TCCTCAAT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103843" refname="2042STDY5252679-sc-2012-03-13T13:21:15Z-1309987" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103843</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252679-sc-2012-03-13T13:21:15Z-1309987</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589495</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#30" center_name="SC" accession="ERX113544"> <IDENTIFIERS> <PRIMARY_ID>ERX113544</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#30</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589483, constructed from sample accession ERS103844 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TGTGGTTG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103844" refname="2042STDY5252680-sc-2012-03-13T13:21:16Z-1309988" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103844</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252680-sc-2012-03-13T13:21:16Z-1309988</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589483</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#31" center_name="SC" accession="ERX113545"> <IDENTIFIERS> <PRIMARY_ID>ERX113545</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#31</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589471, constructed from sample accession ERS103845 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TAGTCTTG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103845" refname="2042STDY5252681-sc-2012-03-13T13:21:17Z-1309989" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103845</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252681-sc-2012-03-13T13:21:17Z-1309989</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589471</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#32" center_name="SC" accession="ERX113546"> <IDENTIFIERS> <PRIMARY_ID>ERX113546</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#32</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589459, constructed from sample accession ERS103846 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TTCCATTG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103846" refname="2042STDY5252682-sc-2012-03-13T13:21:18Z-1309990" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103846</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252682-sc-2012-03-13T13:21:18Z-1309990</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589459</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#33" center_name="SC" accession="ERX113547"> <IDENTIFIERS> <PRIMARY_ID>ERX113547</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#33</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589542, constructed from sample accession ERS103847 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TCGAAGTG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103847" refname="2042STDY5252683-sc-2012-03-13T13:21:19Z-1309991" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103847</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252683-sc-2012-03-13T13:21:19Z-1309991</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589542</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#19" center_name="SC" accession="ERX113723"> <IDENTIFIERS> <PRIMARY_ID>ERX113723</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#19</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587677, constructed from sample accession ERS104023 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TCTGCTGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104023" refname="2042STDY5252860-sc-2012-03-13T13:23:53Z-1310168" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104023</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252860-sc-2012-03-13T13:23:53Z-1310168</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587677</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#20" center_name="SC" accession="ERX113724"> <IDENTIFIERS> <PRIMARY_ID>ERX113724</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#20</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587665, constructed from sample accession ERS104024 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TTGGAGGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104024" refname="2042STDY5252861-sc-2012-03-13T13:23:54Z-1310169" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104024</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252861-sc-2012-03-13T13:23:54Z-1310169</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587665</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#21" center_name="SC" accession="ERX113725"> <IDENTIFIERS> <PRIMARY_ID>ERX113725</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#21</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587653, constructed from sample accession ERS104025 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TCGAGCGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104025" refname="2042STDY5252862-sc-2012-03-13T13:23:55Z-1310170" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104025</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252862-sc-2012-03-13T13:23:55Z-1310170</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587653</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#22" center_name="SC" accession="ERX113726"> <IDENTIFIERS> <PRIMARY_ID>ERX113726</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#22</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587641, constructed from sample accession ERS104026 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TGATACGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104026" refname="2042STDY5252863-sc-2012-03-13T13:23:56Z-1310171" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104026</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252863-sc-2012-03-13T13:23:56Z-1310171</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587641</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#23" center_name="SC" accession="ERX113727"> <IDENTIFIERS> <PRIMARY_ID>ERX113727</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#23</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587629, constructed from sample accession ERS104027 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TGCATAGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104027" refname="2042STDY5252864-sc-2012-03-13T13:23:56Z-1310172" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104027</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252864-sc-2012-03-13T13:23:56Z-1310172</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587629</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#24" center_name="SC" accession="ERX113728"> <IDENTIFIERS> <PRIMARY_ID>ERX113728</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#24</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587617, constructed from sample accession ERS104028 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TTGACTCT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104028" refname="2042STDY5252866-sc-2012-03-13T13:23:57Z-1310174" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104028</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252866-sc-2012-03-13T13:23:57Z-1310174</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587617</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#25" center_name="SC" accession="ERX113729"> <IDENTIFIERS> <PRIMARY_ID>ERX113729</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#25</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587700, constructed from sample accession ERS104029 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TGCGATCT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104029" refname="2042STDY5252867-sc-2012-03-13T13:23:58Z-1310175" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104029</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252867-sc-2012-03-13T13:23:58Z-1310175</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587700</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#26" center_name="SC" accession="ERX113730"> <IDENTIFIERS> <PRIMARY_ID>ERX113730</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#26</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587688, constructed from sample accession ERS104030 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TTCCTGCT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104030" refname="2042STDY5252868-sc-2012-03-13T13:23:59Z-1310176" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104030</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252868-sc-2012-03-13T13:23:59Z-1310176</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587688</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#27" center_name="SC" accession="ERX113731"> <IDENTIFIERS> <PRIMARY_ID>ERX113731</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#27</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587676, constructed from sample accession ERS104031 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TAGTGACT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104031" refname="2042STDY5252869-sc-2012-03-13T13:23:59Z-1310177" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104031</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252869-sc-2012-03-13T13:23:59Z-1310177</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587676</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#28" center_name="SC" accession="ERX113732"> <IDENTIFIERS> <PRIMARY_ID>ERX113732</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#28</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587664, constructed from sample accession ERS104032 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TACAGGAT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104032" refname="2042STDY5252870-sc-2012-03-13T13:24:01Z-1310178" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104032</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252870-sc-2012-03-13T13:24:01Z-1310178</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587664</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#29" center_name="SC" accession="ERX113733"> <IDENTIFIERS> <PRIMARY_ID>ERX113733</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#29</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587652, constructed from sample accession ERS104033 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TCCTCAAT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104033" refname="2042STDY5252871-sc-2012-03-13T13:24:01Z-1310179" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104033</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252871-sc-2012-03-13T13:24:01Z-1310179</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587652</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#30" center_name="SC" accession="ERX113734"> <IDENTIFIERS> <PRIMARY_ID>ERX113734</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#30</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587640, constructed from sample accession ERS104034 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TGTGGTTG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104034" refname="2042STDY5252872-sc-2012-03-13T13:24:02Z-1310180" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104034</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252872-sc-2012-03-13T13:24:02Z-1310180</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587640</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#31" center_name="SC" accession="ERX113735"> <IDENTIFIERS> <PRIMARY_ID>ERX113735</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#31</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587628, constructed from sample accession ERS104035 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TAGTCTTG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104035" refname="2042STDY5252873-sc-2012-03-13T13:24:03Z-1310181" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104035</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252873-sc-2012-03-13T13:24:03Z-1310181</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587628</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#32" center_name="SC" accession="ERX113736"> <IDENTIFIERS> <PRIMARY_ID>ERX113736</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#32</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587616, constructed from sample accession ERS104036 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TTCCATTG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104036" refname="2042STDY5252874-sc-2012-03-13T13:24:04Z-1310182" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104036</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252874-sc-2012-03-13T13:24:04Z-1310182</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587616</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#33" center_name="SC" accession="ERX113737"> <IDENTIFIERS> <PRIMARY_ID>ERX113737</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#33</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587699, constructed from sample accession ERS104037 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TCGAAGTG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104037" refname="2042STDY5252875-sc-2012-03-13T13:24:04Z-1310183" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104037</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252875-sc-2012-03-13T13:24:04Z-1310183</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587699</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#34" center_name="SC" accession="ERX113548"> <IDENTIFIERS> <PRIMARY_ID>ERX113548</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#34</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589530, constructed from sample accession ERS103848 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TAACGCTG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103848" refname="2042STDY5252684-sc-2012-03-13T13:21:20Z-1309992" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103848</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252684-sc-2012-03-13T13:21:20Z-1309992</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589530</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#35" center_name="SC" accession="ERX113549"> <IDENTIFIERS> <PRIMARY_ID>ERX113549</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#35</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589518, constructed from sample accession ERS103849 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TTGGTATG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103849" refname="2042STDY5252685-sc-2012-03-13T13:21:21Z-1309993" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103849</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252685-sc-2012-03-13T13:21:21Z-1309993</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589518</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#36" center_name="SC" accession="ERX113550"> <IDENTIFIERS> <PRIMARY_ID>ERX113550</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#36</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589506, constructed from sample accession ERS103850 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TGAACTGG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103850" refname="2042STDY5252686-sc-2012-03-13T13:21:22Z-1309994" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103850</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252686-sc-2012-03-13T13:21:22Z-1309994</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589506</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#37" center_name="SC" accession="ERX113551"> <IDENTIFIERS> <PRIMARY_ID>ERX113551</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#37</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589494, constructed from sample accession ERS103851 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TACTTCGG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103851" refname="2042STDY5252687-sc-2012-03-13T13:21:23Z-1309995" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103851</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252687-sc-2012-03-13T13:21:23Z-1309995</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589494</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#38" center_name="SC" accession="ERX113552"> <IDENTIFIERS> <PRIMARY_ID>ERX113552</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#38</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589482, constructed from sample accession ERS103852 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TCTCACGG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103852" refname="2042STDY5252688-sc-2012-03-13T13:21:24Z-1309996" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103852</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252688-sc-2012-03-13T13:21:24Z-1309996</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589482</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#39" center_name="SC" accession="ERX113553"> <IDENTIFIERS> <PRIMARY_ID>ERX113553</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#39</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589470, constructed from sample accession ERS103853 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TCAGGAGG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103853" refname="2042STDY5252689-sc-2012-03-13T13:21:25Z-1309997" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103853</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252689-sc-2012-03-13T13:21:25Z-1309997</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589470</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#40" center_name="SC" accession="ERX113554"> <IDENTIFIERS> <PRIMARY_ID>ERX113554</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#40</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589458, constructed from sample accession ERS103854 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TAAGTTCG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103854" refname="2042STDY5252690-sc-2012-03-13T13:21:27Z-1309998" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103854</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252690-sc-2012-03-13T13:21:27Z-1309998</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589458</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#41" center_name="SC" accession="ERX113555"> <IDENTIFIERS> <PRIMARY_ID>ERX113555</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#41</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589541, constructed from sample accession ERS103855 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TCCAGTCG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103855" refname="2042STDY5252691-sc-2012-03-13T13:21:27Z-1309999" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103855</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252691-sc-2012-03-13T13:21:27Z-1309999</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589541</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#42" center_name="SC" accession="ERX113556"> <IDENTIFIERS> <PRIMARY_ID>ERX113556</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#42</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589529, constructed from sample accession ERS103856 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TGTATGCG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103856" refname="2042STDY5252692-sc-2012-03-13T13:21:28Z-1310000" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103856</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252692-sc-2012-03-13T13:21:28Z-1310000</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589529</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#43" center_name="SC" accession="ERX113557"> <IDENTIFIERS> <PRIMARY_ID>ERX113557</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#43</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589517, constructed from sample accession ERS103857 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TCATTGAG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103857" refname="2042STDY5252693-sc-2012-03-13T13:21:29Z-1310001" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103857</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252693-sc-2012-03-13T13:21:29Z-1310001</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589517</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#44" center_name="SC" accession="ERX113558"> <IDENTIFIERS> <PRIMARY_ID>ERX113558</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#44</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589505, constructed from sample accession ERS103858 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TGGCTCAG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103858" refname="2042STDY5252694-sc-2012-03-13T13:21:30Z-1310002" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103858</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252694-sc-2012-03-13T13:21:30Z-1310002</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589505</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#45" center_name="SC" accession="ERX113559"> <IDENTIFIERS> <PRIMARY_ID>ERX113559</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#45</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589493, constructed from sample accession ERS103859 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TATGCCAG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103859" refname="2042STDY5252695-sc-2012-03-13T13:21:31Z-1310003" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103859</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252695-sc-2012-03-13T13:21:31Z-1310003</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589493</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#46" center_name="SC" accession="ERX113560"> <IDENTIFIERS> <PRIMARY_ID>ERX113560</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#46</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589481, constructed from sample accession ERS103860 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TCAGATTC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103860" refname="2042STDY5252696-sc-2012-03-13T13:21:31Z-1310004" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103860</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252696-sc-2012-03-13T13:21:31Z-1310004</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589481</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#47" center_name="SC" accession="ERX113561"> <IDENTIFIERS> <PRIMARY_ID>ERX113561</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#47</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589469, constructed from sample accession ERS103862 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TACTAGTC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103862" refname="2042STDY5252697-sc-2012-03-13T13:21:34Z-1310006" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103862</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252697-sc-2012-03-13T13:21:34Z-1310006</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589469</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#48" center_name="SC" accession="ERX113562"> <IDENTIFIERS> <PRIMARY_ID>ERX113562</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#48</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589457, constructed from sample accession ERS103864 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TTCAGCTC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103864" refname="2042STDY5252698-sc-2012-03-13T13:21:36Z-1310008" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103864</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252698-sc-2012-03-13T13:21:36Z-1310008</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589457</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#34" center_name="SC" accession="ERX113738"> <IDENTIFIERS> <PRIMARY_ID>ERX113738</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#34</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587687, constructed from sample accession ERS104038 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TAACGCTG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104038" refname="2042STDY5252876-sc-2012-03-13T13:24:05Z-1310184" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104038</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252876-sc-2012-03-13T13:24:05Z-1310184</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587687</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#35" center_name="SC" accession="ERX113739"> <IDENTIFIERS> <PRIMARY_ID>ERX113739</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#35</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587675, constructed from sample accession ERS104039 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TTGGTATG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104039" refname="2042STDY5252877-sc-2012-03-13T13:24:06Z-1310185" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104039</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252877-sc-2012-03-13T13:24:06Z-1310185</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587675</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#36" center_name="SC" accession="ERX113740"> <IDENTIFIERS> <PRIMARY_ID>ERX113740</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#36</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587663, constructed from sample accession ERS104040 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TGAACTGG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104040" refname="2042STDY5252878-sc-2012-03-13T13:24:07Z-1310186" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252878-sc-2012-03-13T13:24:07Z-1310186</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587663</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#37" center_name="SC" accession="ERX113741"> <IDENTIFIERS> <PRIMARY_ID>ERX113741</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#37</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587651, constructed from sample accession ERS104041 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TACTTCGG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104041" refname="2042STDY5252879-sc-2012-03-13T13:24:08Z-1310187" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104041</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252879-sc-2012-03-13T13:24:08Z-1310187</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587651</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#38" center_name="SC" accession="ERX113742"> <IDENTIFIERS> <PRIMARY_ID>ERX113742</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#38</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587639, constructed from sample accession ERS104042 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TCTCACGG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104042" refname="2042STDY5252880-sc-2012-03-13T13:24:09Z-1310188" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104042</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252880-sc-2012-03-13T13:24:09Z-1310188</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587639</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#39" center_name="SC" accession="ERX113743"> <IDENTIFIERS> <PRIMARY_ID>ERX113743</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#39</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587627, constructed from sample accession ERS104043 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TCAGGAGG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104043" refname="2042STDY5252881-sc-2012-03-13T13:24:09Z-1310189" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104043</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252881-sc-2012-03-13T13:24:09Z-1310189</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587627</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#40" center_name="SC" accession="ERX113744"> <IDENTIFIERS> <PRIMARY_ID>ERX113744</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#40</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587615, constructed from sample accession ERS104044 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TAAGTTCG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104044" refname="2042STDY5252882-sc-2012-03-13T13:24:10Z-1310190" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104044</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252882-sc-2012-03-13T13:24:10Z-1310190</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587615</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#41" center_name="SC" accession="ERX113745"> <IDENTIFIERS> <PRIMARY_ID>ERX113745</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#41</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587698, constructed from sample accession ERS104045 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TCCAGTCG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104045" refname="2042STDY5252883-sc-2012-03-13T13:24:11Z-1310191" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104045</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252883-sc-2012-03-13T13:24:11Z-1310191</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587698</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#42" center_name="SC" accession="ERX113746"> <IDENTIFIERS> <PRIMARY_ID>ERX113746</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#42</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587686, constructed from sample accession ERS104046 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TGTATGCG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104046" refname="2042STDY5252884-sc-2012-03-13T13:24:11Z-1310192" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104046</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252884-sc-2012-03-13T13:24:11Z-1310192</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587686</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#43" center_name="SC" accession="ERX113747"> <IDENTIFIERS> <PRIMARY_ID>ERX113747</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#43</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587674, constructed from sample accession ERS104047 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TCATTGAG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104047" refname="2042STDY5252885-sc-2012-03-13T13:24:12Z-1310193" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104047</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252885-sc-2012-03-13T13:24:12Z-1310193</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587674</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#44" center_name="SC" accession="ERX113748"> <IDENTIFIERS> <PRIMARY_ID>ERX113748</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#44</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587662, constructed from sample accession ERS104048 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TGGCTCAG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104048" refname="2042STDY5252886-sc-2012-03-13T13:24:13Z-1310194" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104048</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252886-sc-2012-03-13T13:24:13Z-1310194</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587662</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#45" center_name="SC" accession="ERX113749"> <IDENTIFIERS> <PRIMARY_ID>ERX113749</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#45</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587650, constructed from sample accession ERS104049 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TATGCCAG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104049" refname="2042STDY5252887-sc-2012-03-13T13:24:15Z-1310195" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104049</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252887-sc-2012-03-13T13:24:15Z-1310195</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587650</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#46" center_name="SC" accession="ERX113750"> <IDENTIFIERS> <PRIMARY_ID>ERX113750</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#46</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587638, constructed from sample accession ERS104050 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TCAGATTC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104050" refname="2042STDY5252888-sc-2012-03-13T13:24:16Z-1310196" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104050</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252888-sc-2012-03-13T13:24:16Z-1310196</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587638</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#47" center_name="SC" accession="ERX113751"> <IDENTIFIERS> <PRIMARY_ID>ERX113751</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#47</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587626, constructed from sample accession ERS104051 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TACTAGTC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104051" refname="2042STDY5252889-sc-2012-03-13T13:24:17Z-1310197" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104051</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252889-sc-2012-03-13T13:24:17Z-1310197</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587626</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#48" center_name="SC" accession="ERX113752"> <IDENTIFIERS> <PRIMARY_ID>ERX113752</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#48</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587614, constructed from sample accession ERS104052 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TTCAGCTC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104052" refname="2042STDY5252890-sc-2012-03-13T13:24:17Z-1310198" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104052</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252890-sc-2012-03-13T13:24:17Z-1310198</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587614</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#49" center_name="SC" accession="ERX113563"> <IDENTIFIERS> <PRIMARY_ID>ERX113563</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#49</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589540, constructed from sample accession ERS103866 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TGTCTATC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103866" refname="2042STDY5252699-sc-2012-03-13T13:21:38Z-1310010" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103866</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252699-sc-2012-03-13T13:21:38Z-1310010</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589540</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#50" center_name="SC" accession="ERX113564"> <IDENTIFIERS> <PRIMARY_ID>ERX113564</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#50</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589528, constructed from sample accession ERS103868 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TATGTGGC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103868" refname="2042STDY5252700-sc-2012-03-13T13:21:40Z-1310012" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103868</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252700-sc-2012-03-13T13:21:40Z-1310012</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589528</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#51" center_name="SC" accession="ERX113565"> <IDENTIFIERS> <PRIMARY_ID>ERX113565</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#51</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589516, constructed from sample accession ERS103869 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TTACTCGC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103869" refname="2042STDY5252701-sc-2012-03-13T13:21:40Z-1310013" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103869</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252701-sc-2012-03-13T13:21:40Z-1310013</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589516</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#52" center_name="SC" accession="ERX113566"> <IDENTIFIERS> <PRIMARY_ID>ERX113566</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#52</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589504, constructed from sample accession ERS103871 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TCGTTAGC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103871" refname="2042STDY5252702-sc-2012-03-13T13:21:43Z-1310015" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103871</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252702-sc-2012-03-13T13:21:43Z-1310015</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589504</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#53" center_name="SC" accession="ERX113567"> <IDENTIFIERS> <PRIMARY_ID>ERX113567</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#53</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589492, constructed from sample accession ERS103873 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TACCGAGC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103873" refname="2042STDY5252703-sc-2012-03-13T13:21:44Z-1310017" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103873</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252703-sc-2012-03-13T13:21:44Z-1310017</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589492</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#54" center_name="SC" accession="ERX113568"> <IDENTIFIERS> <PRIMARY_ID>ERX113568</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#54</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589480, constructed from sample accession ERS103876 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TGTTCTCC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103876" refname="2042STDY5252704-sc-2012-03-13T13:21:46Z-1310020" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103876</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252704-sc-2012-03-13T13:21:46Z-1310020</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589480</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#55" center_name="SC" accession="ERX113569"> <IDENTIFIERS> <PRIMARY_ID>ERX113569</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#55</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589468, constructed from sample accession ERS103879 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TTCGCACC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103879" refname="2042STDY5252705-sc-2012-03-13T13:21:49Z-1310023" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103879</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252705-sc-2012-03-13T13:21:49Z-1310023</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589468</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#56" center_name="SC" accession="ERX113570"> <IDENTIFIERS> <PRIMARY_ID>ERX113570</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#56</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589456, constructed from sample accession ERS103880 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TTGCGTAC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103880" refname="2042STDY5252706-sc-2012-03-13T13:21:50Z-1310024" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103880</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252706-sc-2012-03-13T13:21:50Z-1310024</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589456</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#57" center_name="SC" accession="ERX113571"> <IDENTIFIERS> <PRIMARY_ID>ERX113571</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#57</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589539, constructed from sample accession ERS103882 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TCTACGAC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103882" refname="2042STDY5252707-sc-2012-03-13T13:21:52Z-1310026" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103882</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252707-sc-2012-03-13T13:21:52Z-1310026</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589539</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#58" center_name="SC" accession="ERX113572"> <IDENTIFIERS> <PRIMARY_ID>ERX113572</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#58</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589527, constructed from sample accession ERS103883 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TGACAGAC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103883" refname="2042STDY5252708-sc-2012-03-13T13:21:53Z-1310027" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103883</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252708-sc-2012-03-13T13:21:53Z-1310027</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589527</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#59" center_name="SC" accession="ERX113573"> <IDENTIFIERS> <PRIMARY_ID>ERX113573</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#59</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589515, constructed from sample accession ERS103884 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TAGAACAC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103884" refname="2042STDY5252709-sc-2012-03-13T13:21:54Z-1310028" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103884</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252709-sc-2012-03-13T13:21:54Z-1310028</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589515</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#60" center_name="SC" accession="ERX113574"> <IDENTIFIERS> <PRIMARY_ID>ERX113574</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#60</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589503, constructed from sample accession ERS103887 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TCATCCTA.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103887" refname="2042STDY5252710-sc-2012-03-13T13:21:58Z-1310031" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103887</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252710-sc-2012-03-13T13:21:58Z-1310031</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589503</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#61" center_name="SC" accession="ERX113575"> <IDENTIFIERS> <PRIMARY_ID>ERX113575</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#61</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589491, constructed from sample accession ERS103888 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TGCTGATA.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103888" refname="2042STDY5252711-sc-2012-03-13T13:21:59Z-1310032" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103888</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252711-sc-2012-03-13T13:21:59Z-1310032</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589491</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#62" center_name="SC" accession="ERX113576"> <IDENTIFIERS> <PRIMARY_ID>ERX113576</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#62</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589479, constructed from sample accession ERS103890 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TAGACGGA.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103890" refname="2042STDY5252712-sc-2012-03-13T13:22:00Z-1310034" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103890</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252712-sc-2012-03-13T13:22:00Z-1310034</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589479</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#63" center_name="SC" accession="ERX113577"> <IDENTIFIERS> <PRIMARY_ID>ERX113577</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#63</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589467, constructed from sample accession ERS103892 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TGTGAAGA.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103892" refname="2042STDY5252713-sc-2012-03-13T13:22:02Z-1310036" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103892</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252713-sc-2012-03-13T13:22:02Z-1310036</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589467</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#49" center_name="SC" accession="ERX113753"> <IDENTIFIERS> <PRIMARY_ID>ERX113753</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#49</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587697, constructed from sample accession ERS104053 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TGTCTATC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104053" refname="2042STDY5252891-sc-2012-03-13T13:24:18Z-1310199" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104053</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252891-sc-2012-03-13T13:24:18Z-1310199</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587697</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#50" center_name="SC" accession="ERX113754"> <IDENTIFIERS> <PRIMARY_ID>ERX113754</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#50</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587685, constructed from sample accession ERS104055 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TATGTGGC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104055" refname="2042STDY5252893-sc-2012-03-13T13:24:20Z-1310201" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104055</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252893-sc-2012-03-13T13:24:20Z-1310201</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587685</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#51" center_name="SC" accession="ERX113755"> <IDENTIFIERS> <PRIMARY_ID>ERX113755</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#51</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587673, constructed from sample accession ERS104056 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TTACTCGC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104056" refname="2042STDY5252894-sc-2012-03-13T13:24:21Z-1310202" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104056</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252894-sc-2012-03-13T13:24:21Z-1310202</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587673</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#52" center_name="SC" accession="ERX113756"> <IDENTIFIERS> <PRIMARY_ID>ERX113756</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#52</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587661, constructed from sample accession ERS104057 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TCGTTAGC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104057" refname="2042STDY5252895-sc-2012-03-13T13:24:22Z-1310203" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104057</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252895-sc-2012-03-13T13:24:22Z-1310203</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587661</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#53" center_name="SC" accession="ERX113757"> <IDENTIFIERS> <PRIMARY_ID>ERX113757</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#53</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587649, constructed from sample accession ERS104058 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TACCGAGC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104058" refname="2042STDY5252896-sc-2012-03-13T13:24:23Z-1310204" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104058</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252896-sc-2012-03-13T13:24:23Z-1310204</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587649</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#54" center_name="SC" accession="ERX113758"> <IDENTIFIERS> <PRIMARY_ID>ERX113758</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#54</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587637, constructed from sample accession ERS104059 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TGTTCTCC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104059" refname="2042STDY5252897-sc-2012-03-13T13:24:23Z-1310205" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104059</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252897-sc-2012-03-13T13:24:23Z-1310205</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587637</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#55" center_name="SC" accession="ERX113759"> <IDENTIFIERS> <PRIMARY_ID>ERX113759</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#55</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587625, constructed from sample accession ERS104060 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TTCGCACC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104060" refname="2042STDY5252898-sc-2012-03-13T13:24:24Z-1310206" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104060</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252898-sc-2012-03-13T13:24:24Z-1310206</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587625</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#56" center_name="SC" accession="ERX113760"> <IDENTIFIERS> <PRIMARY_ID>ERX113760</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#56</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587613, constructed from sample accession ERS104061 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TTGCGTAC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104061" refname="2042STDY5252899-sc-2012-03-13T13:24:25Z-1310207" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104061</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252899-sc-2012-03-13T13:24:25Z-1310207</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587613</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#57" center_name="SC" accession="ERX113761"> <IDENTIFIERS> <PRIMARY_ID>ERX113761</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#57</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587696, constructed from sample accession ERS104062 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TCTACGAC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104062" refname="2042STDY5252900-sc-2012-03-13T13:24:26Z-1310208" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104062</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252900-sc-2012-03-13T13:24:26Z-1310208</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587696</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#58" center_name="SC" accession="ERX113762"> <IDENTIFIERS> <PRIMARY_ID>ERX113762</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#58</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587684, constructed from sample accession ERS104063 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TGACAGAC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104063" refname="2042STDY5252901-sc-2012-03-13T13:24:27Z-1310209" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104063</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252901-sc-2012-03-13T13:24:27Z-1310209</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587684</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#59" center_name="SC" accession="ERX113763"> <IDENTIFIERS> <PRIMARY_ID>ERX113763</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#59</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587672, constructed from sample accession ERS104064 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TAGAACAC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104064" refname="2042STDY5252902-sc-2012-03-13T13:24:28Z-1310210" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104064</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252902-sc-2012-03-13T13:24:28Z-1310210</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587672</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#60" center_name="SC" accession="ERX113764"> <IDENTIFIERS> <PRIMARY_ID>ERX113764</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#60</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587660, constructed from sample accession ERS104065 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TCATCCTA.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104065" refname="2042STDY5252903-sc-2012-03-13T13:24:29Z-1310211" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104065</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252903-sc-2012-03-13T13:24:29Z-1310211</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587660</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#61" center_name="SC" accession="ERX113765"> <IDENTIFIERS> <PRIMARY_ID>ERX113765</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#61</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587648, constructed from sample accession ERS104066 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TGCTGATA.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104066" refname="2042STDY5252904-sc-2012-03-13T13:24:30Z-1310212" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104066</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252904-sc-2012-03-13T13:24:30Z-1310212</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587648</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#62" center_name="SC" accession="ERX113766"> <IDENTIFIERS> <PRIMARY_ID>ERX113766</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#62</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587636, constructed from sample accession ERS104067 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TAGACGGA.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104067" refname="2042STDY5252905-sc-2012-03-13T13:24:30Z-1310213" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104067</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252905-sc-2012-03-13T13:24:30Z-1310213</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587636</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#63" center_name="SC" accession="ERX113767"> <IDENTIFIERS> <PRIMARY_ID>ERX113767</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#63</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587624, constructed from sample accession ERS104068 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TGTGAAGA.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104068" refname="2042STDY5252906-sc-2012-03-13T13:24:31Z-1310214" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104068</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252906-sc-2012-03-13T13:24:31Z-1310214</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587624</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#64" center_name="SC" accession="ERX113578"> <IDENTIFIERS> <PRIMARY_ID>ERX113578</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#64</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589455, constructed from sample accession ERS103894 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TCTCTTCA.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103894" refname="2042STDY5252714-sc-2012-03-13T13:22:04Z-1310038" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103894</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252714-sc-2012-03-13T13:22:04Z-1310038</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589455</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#65" center_name="SC" accession="ERX113579"> <IDENTIFIERS> <PRIMARY_ID>ERX113579</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#65</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589538, constructed from sample accession ERS103896 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TTGTTCCA.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103896" refname="2042STDY5252715-sc-2012-03-13T13:22:06Z-1310040" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103896</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252715-sc-2012-03-13T13:22:06Z-1310040</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589538</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#66" center_name="SC" accession="ERX113580"> <IDENTIFIERS> <PRIMARY_ID>ERX113580</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#66</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589526, constructed from sample accession ERS103898 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TGAAGCCA.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103898" refname="2042STDY5252716-sc-2012-03-13T13:22:08Z-1310042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103898</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252716-sc-2012-03-13T13:22:08Z-1310042</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589526</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#67" center_name="SC" accession="ERX113581"> <IDENTIFIERS> <PRIMARY_ID>ERX113581</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#67</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589514, constructed from sample accession ERS103903 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TACCACCA.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103903" refname="2042STDY5252717-sc-2012-03-13T13:22:12Z-1310047" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103903</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252717-sc-2012-03-13T13:22:12Z-1310047</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589514</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#68" center_name="SC" accession="ERX113582"> <IDENTIFIERS> <PRIMARY_ID>ERX113582</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#68</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589502, constructed from sample accession ERS103905 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence TGCGTGAA.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103905" refname="2042STDY5252718-sc-2012-03-13T13:22:13Z-1310049" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103905</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252718-sc-2012-03-13T13:22:13Z-1310049</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589502</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#69" center_name="SC" accession="ERX113583"> <IDENTIFIERS> <PRIMARY_ID>ERX113583</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#69</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589490, constructed from sample accession ERS103907 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence GGTGAGTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103907" refname="2042STDY5252719-sc-2012-03-13T13:22:15Z-1310051" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103907</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252719-sc-2012-03-13T13:22:15Z-1310051</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589490</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#70" center_name="SC" accession="ERX113584"> <IDENTIFIERS> <PRIMARY_ID>ERX113584</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#70</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589478, constructed from sample accession ERS103908 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence GATCTCTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103908" refname="2042STDY5252720-sc-2012-03-13T13:22:15Z-1310052" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103908</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252720-sc-2012-03-13T13:22:15Z-1310052</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589478</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#71" center_name="SC" accession="ERX113585"> <IDENTIFIERS> <PRIMARY_ID>ERX113585</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#71</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589466, constructed from sample accession ERS103909 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence GTGTCCTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103909" refname="2042STDY5252721-sc-2012-03-13T13:22:16Z-1310053" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103909</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252721-sc-2012-03-13T13:22:16Z-1310053</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589466</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#72" center_name="SC" accession="ERX113586"> <IDENTIFIERS> <PRIMARY_ID>ERX113586</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#72</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589454, constructed from sample accession ERS103861 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence GACGGATT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103861" refname="2042STDY5252770-sc-2012-03-13T13:21:32Z-1310005" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103861</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252770-sc-2012-03-13T13:21:32Z-1310005</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589454</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#73" center_name="SC" accession="ERX113587"> <IDENTIFIERS> <PRIMARY_ID>ERX113587</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#73</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589537, constructed from sample accession ERS103863 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence GCAACATT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103863" refname="2042STDY5252771-sc-2012-03-13T13:21:35Z-1310007" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103863</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252771-sc-2012-03-13T13:21:35Z-1310007</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589537</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#74" center_name="SC" accession="ERX113588"> <IDENTIFIERS> <PRIMARY_ID>ERX113588</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#74</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589525, constructed from sample accession ERS103865 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence GGTCGTGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103865" refname="2042STDY5252772-sc-2012-03-13T13:21:37Z-1310009" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103865</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252772-sc-2012-03-13T13:21:37Z-1310009</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589525</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#75" center_name="SC" accession="ERX113589"> <IDENTIFIERS> <PRIMARY_ID>ERX113589</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#75</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589513, constructed from sample accession ERS103867 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence GAATCTGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103867" refname="2042STDY5252773-sc-2012-03-13T13:21:39Z-1310011" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103867</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252773-sc-2012-03-13T13:21:39Z-1310011</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589513</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#76" center_name="SC" accession="ERX113590"> <IDENTIFIERS> <PRIMARY_ID>ERX113590</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#76</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589501, constructed from sample accession ERS103870 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence GTACATCT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103870" refname="2042STDY5252774-sc-2012-03-13T13:21:41Z-1310014" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103870</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252774-sc-2012-03-13T13:21:41Z-1310014</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589501</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#77" center_name="SC" accession="ERX113591"> <IDENTIFIERS> <PRIMARY_ID>ERX113591</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#77</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589489, constructed from sample accession ERS103872 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence GAGGTGCT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103872" refname="2042STDY5252775-sc-2012-03-13T13:21:43Z-1310016" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103872</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252775-sc-2012-03-13T13:21:43Z-1310016</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589489</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#78" center_name="SC" accession="ERX113592"> <IDENTIFIERS> <PRIMARY_ID>ERX113592</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#78</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589477, constructed from sample accession ERS103874 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence GCATGGCT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103874" refname="2042STDY5252776-sc-2012-03-13T13:21:45Z-1310018" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103874</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252776-sc-2012-03-13T13:21:45Z-1310018</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589477</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#64" center_name="SC" accession="ERX113768"> <IDENTIFIERS> <PRIMARY_ID>ERX113768</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#64</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587612, constructed from sample accession ERS104069 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TCTCTTCA.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104069" refname="2042STDY5252907-sc-2012-03-13T13:24:32Z-1310215" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104069</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252907-sc-2012-03-13T13:24:32Z-1310215</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587612</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#65" center_name="SC" accession="ERX113769"> <IDENTIFIERS> <PRIMARY_ID>ERX113769</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#65</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587695, constructed from sample accession ERS104070 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TTGTTCCA.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104070" refname="2042STDY5252908-sc-2012-03-13T13:24:32Z-1310216" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104070</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252908-sc-2012-03-13T13:24:32Z-1310216</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587695</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#66" center_name="SC" accession="ERX113770"> <IDENTIFIERS> <PRIMARY_ID>ERX113770</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#66</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587683, constructed from sample accession ERS104071 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TGAAGCCA.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104071" refname="2042STDY5252909-sc-2012-03-13T13:24:33Z-1310217" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104071</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252909-sc-2012-03-13T13:24:33Z-1310217</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587683</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#67" center_name="SC" accession="ERX113771"> <IDENTIFIERS> <PRIMARY_ID>ERX113771</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#67</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587671, constructed from sample accession ERS104072 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TACCACCA.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104072" refname="2042STDY5252910-sc-2012-03-13T13:24:34Z-1310218" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104072</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252910-sc-2012-03-13T13:24:34Z-1310218</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587671</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#68" center_name="SC" accession="ERX113772"> <IDENTIFIERS> <PRIMARY_ID>ERX113772</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#68</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587659, constructed from sample accession ERS104073 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence TGCGTGAA.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104073" refname="2042STDY5252911-sc-2012-03-13T13:24:35Z-1310219" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104073</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252911-sc-2012-03-13T13:24:35Z-1310219</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587659</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#69" center_name="SC" accession="ERX113773"> <IDENTIFIERS> <PRIMARY_ID>ERX113773</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#69</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587647, constructed from sample accession ERS104074 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence GGTGAGTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104074" refname="2042STDY5252912-sc-2012-03-13T13:24:36Z-1310220" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104074</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252912-sc-2012-03-13T13:24:36Z-1310220</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587647</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#70" center_name="SC" accession="ERX113774"> <IDENTIFIERS> <PRIMARY_ID>ERX113774</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#70</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587635, constructed from sample accession ERS104075 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence GATCTCTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104075" refname="2042STDY5252913-sc-2012-03-13T13:24:37Z-1310221" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104075</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252913-sc-2012-03-13T13:24:37Z-1310221</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587635</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#71" center_name="SC" accession="ERX113775"> <IDENTIFIERS> <PRIMARY_ID>ERX113775</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#71</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587623, constructed from sample accession ERS104076 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence GTGTCCTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104076" refname="2042STDY5252914-sc-2012-03-13T13:24:37Z-1310222" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104076</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252914-sc-2012-03-13T13:24:37Z-1310222</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587623</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#72" center_name="SC" accession="ERX113776"> <IDENTIFIERS> <PRIMARY_ID>ERX113776</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#72</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587611, constructed from sample accession ERS104077 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence GACGGATT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104077" refname="2042STDY5252915-sc-2012-03-13T13:24:38Z-1310223" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104077</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252915-sc-2012-03-13T13:24:38Z-1310223</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587611</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#73" center_name="SC" accession="ERX113777"> <IDENTIFIERS> <PRIMARY_ID>ERX113777</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#73</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587694, constructed from sample accession ERS104078 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence GCAACATT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104078" refname="2042STDY5252916-sc-2012-03-13T13:24:39Z-1310224" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104078</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252916-sc-2012-03-13T13:24:39Z-1310224</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587694</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#74" center_name="SC" accession="ERX113778"> <IDENTIFIERS> <PRIMARY_ID>ERX113778</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#74</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587682, constructed from sample accession ERS104079 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence GGTCGTGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104079" refname="2042STDY5252917-sc-2012-03-13T13:24:39Z-1310225" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104079</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252917-sc-2012-03-13T13:24:39Z-1310225</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587682</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#75" center_name="SC" accession="ERX113779"> <IDENTIFIERS> <PRIMARY_ID>ERX113779</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#75</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587670, constructed from sample accession ERS104080 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence GAATCTGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104080" refname="2042STDY5252918-sc-2012-03-13T13:24:41Z-1310226" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104080</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252918-sc-2012-03-13T13:24:41Z-1310226</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587670</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#76" center_name="SC" accession="ERX113780"> <IDENTIFIERS> <PRIMARY_ID>ERX113780</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#76</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587658, constructed from sample accession ERS104081 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence GTACATCT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104081" refname="2042STDY5252919-sc-2012-03-13T13:24:41Z-1310227" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104081</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252919-sc-2012-03-13T13:24:41Z-1310227</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587658</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#77" center_name="SC" accession="ERX113781"> <IDENTIFIERS> <PRIMARY_ID>ERX113781</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#77</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587646, constructed from sample accession ERS104082 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence GAGGTGCT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104082" refname="2042STDY5252920-sc-2012-03-13T13:24:42Z-1310228" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104082</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252920-sc-2012-03-13T13:24:42Z-1310228</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587646</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#78" center_name="SC" accession="ERX113782"> <IDENTIFIERS> <PRIMARY_ID>ERX113782</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#78</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587634, constructed from sample accession ERS104083 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence GCATGGCT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104083" refname="2042STDY5252921-sc-2012-03-13T13:24:43Z-1310229" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104083</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252921-sc-2012-03-13T13:24:43Z-1310229</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587634</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#79" center_name="SC" accession="ERX113593"> <IDENTIFIERS> <PRIMARY_ID>ERX113593</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#79</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589465, constructed from sample accession ERS103875 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence GTTAGCCT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103875" refname="2042STDY5252777-sc-2012-03-13T13:21:46Z-1310019" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103875</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252777-sc-2012-03-13T13:21:46Z-1310019</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589465</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#80" center_name="SC" accession="ERX113594"> <IDENTIFIERS> <PRIMARY_ID>ERX113594</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#80</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589453, constructed from sample accession ERS103877 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence GTCGCTAT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103877" refname="2042STDY5252778-sc-2012-03-13T13:21:47Z-1310021" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103877</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252778-sc-2012-03-13T13:21:47Z-1310021</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589453</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#81" center_name="SC" accession="ERX113595"> <IDENTIFIERS> <PRIMARY_ID>ERX113595</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#81</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589536, constructed from sample accession ERS103878 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence GGAATGAT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103878" refname="2042STDY5252779-sc-2012-03-13T13:21:48Z-1310022" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103878</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252779-sc-2012-03-13T13:21:48Z-1310022</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589536</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#82" center_name="SC" accession="ERX113596"> <IDENTIFIERS> <PRIMARY_ID>ERX113596</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#82</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589524, constructed from sample accession ERS103881 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence GAGCCAAT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103881" refname="2042STDY5252780-sc-2012-03-13T13:21:51Z-1310025" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103881</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252780-sc-2012-03-13T13:21:51Z-1310025</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589524</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#83" center_name="SC" accession="ERX113597"> <IDENTIFIERS> <PRIMARY_ID>ERX113597</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#83</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589512, constructed from sample accession ERS103885 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence GCTCCTTG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103885" refname="2042STDY5252781-sc-2012-03-13T13:21:55Z-1310029" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103885</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252781-sc-2012-03-13T13:21:55Z-1310029</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589512</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#84" center_name="SC" accession="ERX113598"> <IDENTIFIERS> <PRIMARY_ID>ERX113598</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#84</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589500, constructed from sample accession ERS103886 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence GTAAGGTG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103886" refname="2042STDY5252782-sc-2012-03-13T13:21:56Z-1310030" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103886</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252782-sc-2012-03-13T13:21:56Z-1310030</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589500</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#85" center_name="SC" accession="ERX113599"> <IDENTIFIERS> <PRIMARY_ID>ERX113599</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#85</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589488, constructed from sample accession ERS103889 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence GAGGATGG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103889" refname="2042STDY5252783-sc-2012-03-13T13:22:00Z-1310033" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103889</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252783-sc-2012-03-13T13:22:00Z-1310033</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589488</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#86" center_name="SC" accession="ERX113600"> <IDENTIFIERS> <PRIMARY_ID>ERX113600</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#86</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589476, constructed from sample accession ERS103891 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence GTTGTCGG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103891" refname="2042STDY5252784-sc-2012-03-13T13:22:01Z-1310035" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103891</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252784-sc-2012-03-13T13:22:01Z-1310035</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589476</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#87" center_name="SC" accession="ERX113601"> <IDENTIFIERS> <PRIMARY_ID>ERX113601</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#87</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589464, constructed from sample accession ERS103893 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence GGATTAGG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103893" refname="2042STDY5252785-sc-2012-03-13T13:22:03Z-1310037" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103893</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252785-sc-2012-03-13T13:22:03Z-1310037</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589464</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#88" center_name="SC" accession="ERX113602"> <IDENTIFIERS> <PRIMARY_ID>ERX113602</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#88</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589452, constructed from sample accession ERS103895 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence GATAGAGG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103895" refname="2042STDY5252786-sc-2012-03-13T13:22:05Z-1310039" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103895</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252786-sc-2012-03-13T13:22:05Z-1310039</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589452</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#89" center_name="SC" accession="ERX113603"> <IDENTIFIERS> <PRIMARY_ID>ERX113603</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#89</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589535, constructed from sample accession ERS103897 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence GTGTGTCG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103897" refname="2042STDY5252787-sc-2012-03-13T13:22:07Z-1310041" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103897</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252787-sc-2012-03-13T13:22:07Z-1310041</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589535</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#90" center_name="SC" accession="ERX113604"> <IDENTIFIERS> <PRIMARY_ID>ERX113604</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#90</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589523, constructed from sample accession ERS103899 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence GCAATCCG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103899" refname="2042STDY5252788-sc-2012-03-13T13:22:08Z-1310043" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103899</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252788-sc-2012-03-13T13:22:08Z-1310043</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589523</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#91" center_name="SC" accession="ERX113605"> <IDENTIFIERS> <PRIMARY_ID>ERX113605</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#91</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589511, constructed from sample accession ERS103900 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence GACCTTAG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103900" refname="2042STDY5252789-sc-2012-03-13T13:22:09Z-1310044" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103900</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252789-sc-2012-03-13T13:22:09Z-1310044</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589511</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#92" center_name="SC" accession="ERX113606"> <IDENTIFIERS> <PRIMARY_ID>ERX113606</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#92</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589499, constructed from sample accession ERS103901 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence GCCTGTTC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103901" refname="2042STDY5252790-sc-2012-03-13T13:22:10Z-1310045" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103901</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252790-sc-2012-03-13T13:22:10Z-1310045</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589499</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#93" center_name="SC" accession="ERX113607"> <IDENTIFIERS> <PRIMARY_ID>ERX113607</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#93</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589487, constructed from sample accession ERS103902 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence GCACTGTC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103902" refname="2042STDY5252791-sc-2012-03-13T13:22:10Z-1310046" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103902</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252791-sc-2012-03-13T13:22:10Z-1310046</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589487</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#79" center_name="SC" accession="ERX113783"> <IDENTIFIERS> <PRIMARY_ID>ERX113783</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#79</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587622, constructed from sample accession ERS104084 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence GTTAGCCT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104084" refname="2042STDY5252922-sc-2012-03-13T13:24:44Z-1310230" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104084</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252922-sc-2012-03-13T13:24:44Z-1310230</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587622</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#80" center_name="SC" accession="ERX113784"> <IDENTIFIERS> <PRIMARY_ID>ERX113784</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#80</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587610, constructed from sample accession ERS104085 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence GTCGCTAT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104085" refname="2042STDY5252923-sc-2012-03-13T13:24:45Z-1310231" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104085</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252923-sc-2012-03-13T13:24:45Z-1310231</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587610</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#81" center_name="SC" accession="ERX113785"> <IDENTIFIERS> <PRIMARY_ID>ERX113785</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#81</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587693, constructed from sample accession ERS104086 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence GGAATGAT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104086" refname="2042STDY5252924-sc-2012-03-13T13:24:45Z-1310232" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104086</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252924-sc-2012-03-13T13:24:45Z-1310232</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587693</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#82" center_name="SC" accession="ERX113786"> <IDENTIFIERS> <PRIMARY_ID>ERX113786</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#82</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587681, constructed from sample accession ERS104087 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence GAGCCAAT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104087" refname="2042STDY5252925-sc-2012-03-13T13:24:46Z-1310233" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104087</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252925-sc-2012-03-13T13:24:46Z-1310233</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587681</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#83" center_name="SC" accession="ERX113787"> <IDENTIFIERS> <PRIMARY_ID>ERX113787</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#83</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587669, constructed from sample accession ERS104088 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence GCTCCTTG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104088" refname="2042STDY5252926-sc-2012-03-13T13:24:47Z-1310234" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104088</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252926-sc-2012-03-13T13:24:47Z-1310234</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587669</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#84" center_name="SC" accession="ERX113788"> <IDENTIFIERS> <PRIMARY_ID>ERX113788</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#84</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587657, constructed from sample accession ERS104089 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence GTAAGGTG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104089" refname="2042STDY5252927-sc-2012-03-13T13:24:48Z-1310235" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104089</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252927-sc-2012-03-13T13:24:48Z-1310235</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587657</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#85" center_name="SC" accession="ERX113789"> <IDENTIFIERS> <PRIMARY_ID>ERX113789</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#85</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587645, constructed from sample accession ERS104090 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence GAGGATGG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104090" refname="2042STDY5252928-sc-2012-03-13T13:24:49Z-1310236" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104090</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252928-sc-2012-03-13T13:24:49Z-1310236</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587645</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#86" center_name="SC" accession="ERX113790"> <IDENTIFIERS> <PRIMARY_ID>ERX113790</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#86</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587633, constructed from sample accession ERS104091 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence GTTGTCGG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104091" refname="2042STDY5252929-sc-2012-03-13T13:24:50Z-1310237" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104091</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252929-sc-2012-03-13T13:24:50Z-1310237</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587633</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#87" center_name="SC" accession="ERX113791"> <IDENTIFIERS> <PRIMARY_ID>ERX113791</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#87</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587621, constructed from sample accession ERS104092 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence GGATTAGG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104092" refname="2042STDY5252930-sc-2012-03-13T13:24:51Z-1310238" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104092</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252930-sc-2012-03-13T13:24:51Z-1310238</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587621</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#88" center_name="SC" accession="ERX113792"> <IDENTIFIERS> <PRIMARY_ID>ERX113792</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#88</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587609, constructed from sample accession ERS104093 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence GATAGAGG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104093" refname="2042STDY5252931-sc-2012-03-13T13:24:51Z-1310239" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104093</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252931-sc-2012-03-13T13:24:51Z-1310239</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587609</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#89" center_name="SC" accession="ERX113793"> <IDENTIFIERS> <PRIMARY_ID>ERX113793</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#89</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587692, constructed from sample accession ERS104094 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence GTGTGTCG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104094" refname="2042STDY5252932-sc-2012-03-13T13:24:52Z-1310240" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104094</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252932-sc-2012-03-13T13:24:52Z-1310240</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587692</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#90" center_name="SC" accession="ERX113794"> <IDENTIFIERS> <PRIMARY_ID>ERX113794</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#90</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587680, constructed from sample accession ERS104095 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence GCAATCCG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104095" refname="2042STDY5252933-sc-2012-03-13T13:24:53Z-1310241" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104095</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252933-sc-2012-03-13T13:24:53Z-1310241</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587680</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#91" center_name="SC" accession="ERX113795"> <IDENTIFIERS> <PRIMARY_ID>ERX113795</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#91</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587668, constructed from sample accession ERS104096 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence GACCTTAG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104096" refname="2042STDY5252934-sc-2012-03-13T13:24:54Z-1310242" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104096</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252934-sc-2012-03-13T13:24:54Z-1310242</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587668</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#92" center_name="SC" accession="ERX113796"> <IDENTIFIERS> <PRIMARY_ID>ERX113796</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#92</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587656, constructed from sample accession ERS104097 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence GCCTGTTC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104097" refname="2042STDY5252935-sc-2012-03-13T13:24:55Z-1310243" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104097</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252935-sc-2012-03-13T13:24:55Z-1310243</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587656</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#93" center_name="SC" accession="ERX113797"> <IDENTIFIERS> <PRIMARY_ID>ERX113797</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#93</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587644, constructed from sample accession ERS104098 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence GCACTGTC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104098" refname="2042STDY5252936-sc-2012-03-13T13:24:56Z-1310244" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104098</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252936-sc-2012-03-13T13:24:56Z-1310244</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587644</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#94" center_name="SC" accession="ERX113608"> <IDENTIFIERS> <PRIMARY_ID>ERX113608</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#94</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589475, constructed from sample accession ERS103904 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence GCTAACTC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103904" refname="2042STDY5252792-sc-2012-03-13T13:22:12Z-1310048" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103904</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252792-sc-2012-03-13T13:22:12Z-1310048</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589475</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_3#95" center_name="SC" accession="ERX113609"> <IDENTIFIERS> <PRIMARY_ID>ERX113609</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_3#95</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4589463, constructed from sample accession ERS103906 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_3). This submission includes reads tagged with the sequence GATTCATC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103906" refname="2042STDY5252793-sc-2012-03-13T13:22:14Z-1310050" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103906</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252793-sc-2012-03-13T13:22:14Z-1310050</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4589463</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="287" NOMINAL_SDEV="101"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#1" center_name="SC" accession="ERX113610"> <IDENTIFIERS> <PRIMARY_ID>ERX113610</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#1</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609119, constructed from sample accession ERS103910 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence ATCACGTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103910" refname="2042STDY5252722-sc-2012-03-13T13:22:17Z-1310054" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103910</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252722-sc-2012-03-13T13:22:17Z-1310054</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609119</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#2" center_name="SC" accession="ERX113611"> <IDENTIFIERS> <PRIMARY_ID>ERX113611</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#2</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609107, constructed from sample accession ERS103911 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence CGATGTTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103911" refname="2042STDY5252723-sc-2012-03-13T13:22:18Z-1310055" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103911</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252723-sc-2012-03-13T13:22:18Z-1310055</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609107</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#3" center_name="SC" accession="ERX113612"> <IDENTIFIERS> <PRIMARY_ID>ERX113612</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#3</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609095, constructed from sample accession ERS103912 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TTAGGCAT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103912" refname="2042STDY5252724-sc-2012-03-13T13:22:19Z-1310056" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103912</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252724-sc-2012-03-13T13:22:19Z-1310056</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609095</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#4" center_name="SC" accession="ERX113613"> <IDENTIFIERS> <PRIMARY_ID>ERX113613</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#4</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609083, constructed from sample accession ERS103918 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TGACCACT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103918" refname="2042STDY5252725-sc-2012-03-13T13:22:23Z-1310062" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103918</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252725-sc-2012-03-13T13:22:23Z-1310062</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609083</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#5" center_name="SC" accession="ERX113614"> <IDENTIFIERS> <PRIMARY_ID>ERX113614</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#5</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609071, constructed from sample accession ERS103919 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence ACAGTGGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103919" refname="2042STDY5252726-sc-2012-03-13T13:22:24Z-1310063" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103919</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252726-sc-2012-03-13T13:22:24Z-1310063</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609071</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#6" center_name="SC" accession="ERX113615"> <IDENTIFIERS> <PRIMARY_ID>ERX113615</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#6</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609059, constructed from sample accession ERS103922 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence GCCAATGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103922" refname="2042STDY5252727-sc-2012-03-13T13:22:27Z-1310066" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103922</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252727-sc-2012-03-13T13:22:27Z-1310066</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609059</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#7" center_name="SC" accession="ERX113616"> <IDENTIFIERS> <PRIMARY_ID>ERX113616</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#7</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609047, constructed from sample accession ERS103923 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence CAGATCTG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103923" refname="2042STDY5252728-sc-2012-03-13T13:22:27Z-1310067" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103923</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252728-sc-2012-03-13T13:22:27Z-1310067</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609047</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#8" center_name="SC" accession="ERX113617"> <IDENTIFIERS> <PRIMARY_ID>ERX113617</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#8</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609035, constructed from sample accession ERS103924 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence ACTTGATG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103924" refname="2042STDY5252729-sc-2012-03-13T13:22:28Z-1310068" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103924</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252729-sc-2012-03-13T13:22:28Z-1310068</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609035</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#9" center_name="SC" accession="ERX113618"> <IDENTIFIERS> <PRIMARY_ID>ERX113618</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#9</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609118, constructed from sample accession ERS103925 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence GATCAGCG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103925" refname="2042STDY5252730-sc-2012-03-13T13:22:29Z-1310069" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103925</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252730-sc-2012-03-13T13:22:29Z-1310069</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609118</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#10" center_name="SC" accession="ERX113619"> <IDENTIFIERS> <PRIMARY_ID>ERX113619</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#10</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609106, constructed from sample accession ERS103926 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TAGCTTGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103926" refname="2042STDY5252731-sc-2012-03-13T13:22:30Z-1310070" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103926</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252731-sc-2012-03-13T13:22:30Z-1310070</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609106</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#11" center_name="SC" accession="ERX113620"> <IDENTIFIERS> <PRIMARY_ID>ERX113620</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#11</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609094, constructed from sample accession ERS103931 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence GGCTACAG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103931" refname="2042STDY5252732-sc-2012-03-13T13:22:34Z-1310075" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103931</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252732-sc-2012-03-13T13:22:34Z-1310075</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609094</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#12" center_name="SC" accession="ERX113621"> <IDENTIFIERS> <PRIMARY_ID>ERX113621</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#12</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609082, constructed from sample accession ERS103933 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence CTTGTACT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103933" refname="2042STDY5252733-sc-2012-03-13T13:22:35Z-1310077" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103933</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252733-sc-2012-03-13T13:22:35Z-1310077</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609082</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#13" center_name="SC" accession="ERX113622"> <IDENTIFIERS> <PRIMARY_ID>ERX113622</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#13</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609070, constructed from sample accession ERS103936 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TGGTTGTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103936" refname="2042STDY5252734-sc-2012-03-13T13:22:38Z-1310080" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103936</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252734-sc-2012-03-13T13:22:38Z-1310080</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609070</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#94" center_name="SC" accession="ERX113798"> <IDENTIFIERS> <PRIMARY_ID>ERX113798</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#94</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587632, constructed from sample accession ERS104099 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence GCTAACTC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104099" refname="2042STDY5252937-sc-2012-03-13T13:24:56Z-1310245" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104099</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252937-sc-2012-03-13T13:24:56Z-1310245</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587632</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_5#95" center_name="SC" accession="ERX113799"> <IDENTIFIERS> <PRIMARY_ID>ERX113799</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_5#95</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4587620, constructed from sample accession ERS104100 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_5). This submission includes reads tagged with the sequence GATTCATC.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS104100" refname="2042STDY5252938-sc-2012-03-13T13:24:57Z-1310246" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS104100</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252938-sc-2012-03-13T13:24:57Z-1310246</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4587620</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="305" NOMINAL_SDEV="89"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#14" center_name="SC" accession="ERX113623"> <IDENTIFIERS> <PRIMARY_ID>ERX113623</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#14</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609058, constructed from sample accession ERS103937 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TCTCGGTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103937" refname="2042STDY5252735-sc-2012-03-13T13:22:39Z-1310081" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103937</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252735-sc-2012-03-13T13:22:39Z-1310081</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609058</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#15" center_name="SC" accession="ERX113624"> <IDENTIFIERS> <PRIMARY_ID>ERX113624</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#15</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609046, constructed from sample accession ERS103938 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TAAGCGTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103938" refname="2042STDY5252736-sc-2012-03-13T13:22:40Z-1310082" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103938</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252736-sc-2012-03-13T13:22:40Z-1310082</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609046</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#16" center_name="SC" accession="ERX113625"> <IDENTIFIERS> <PRIMARY_ID>ERX113625</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#16</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609034, constructed from sample accession ERS103939 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TCCGTCTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103939" refname="2042STDY5252737-sc-2012-03-13T13:22:40Z-1310083" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103939</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252737-sc-2012-03-13T13:22:40Z-1310083</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609034</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#17" center_name="SC" accession="ERX113626"> <IDENTIFIERS> <PRIMARY_ID>ERX113626</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#17</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609117, constructed from sample accession ERS103940 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TGTACCTT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103940" refname="2042STDY5252738-sc-2012-03-13T13:22:42Z-1310084" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103940</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252738-sc-2012-03-13T13:22:42Z-1310084</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609117</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#18" center_name="SC" accession="ERX113627"> <IDENTIFIERS> <PRIMARY_ID>ERX113627</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#18</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609105, constructed from sample accession ERS103941 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TTCTGTGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103941" refname="2042STDY5252739-sc-2012-03-13T13:22:43Z-1310085" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103941</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252739-sc-2012-03-13T13:22:43Z-1310085</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609105</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#19" center_name="SC" accession="ERX113628"> <IDENTIFIERS> <PRIMARY_ID>ERX113628</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#19</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609093, constructed from sample accession ERS103946 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TCTGCTGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103946" refname="2042STDY5252740-sc-2012-03-13T13:22:47Z-1310090" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103946</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252740-sc-2012-03-13T13:22:47Z-1310090</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609093</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#20" center_name="SC" accession="ERX113629"> <IDENTIFIERS> <PRIMARY_ID>ERX113629</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#20</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609081, constructed from sample accession ERS103949 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TTGGAGGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103949" refname="2042STDY5252741-sc-2012-03-13T13:22:49Z-1310093" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103949</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252741-sc-2012-03-13T13:22:49Z-1310093</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609081</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#21" center_name="SC" accession="ERX113630"> <IDENTIFIERS> <PRIMARY_ID>ERX113630</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#21</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609069, constructed from sample accession ERS103951 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TCGAGCGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103951" refname="2042STDY5252742-sc-2012-03-13T13:22:51Z-1310095" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103951</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252742-sc-2012-03-13T13:22:51Z-1310095</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609069</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#22" center_name="SC" accession="ERX113631"> <IDENTIFIERS> <PRIMARY_ID>ERX113631</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#22</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609057, constructed from sample accession ERS103952 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TGATACGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103952" refname="2042STDY5252743-sc-2012-03-13T13:22:52Z-1310096" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103952</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252743-sc-2012-03-13T13:22:52Z-1310096</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609057</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#23" center_name="SC" accession="ERX113632"> <IDENTIFIERS> <PRIMARY_ID>ERX113632</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#23</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609045, constructed from sample accession ERS103953 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TGCATAGT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103953" refname="2042STDY5252744-sc-2012-03-13T13:22:53Z-1310097" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103953</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252744-sc-2012-03-13T13:22:53Z-1310097</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609045</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#24" center_name="SC" accession="ERX113633"> <IDENTIFIERS> <PRIMARY_ID>ERX113633</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#24</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609033, constructed from sample accession ERS103954 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TTGACTCT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103954" refname="2042STDY5252745-sc-2012-03-13T13:22:54Z-1310098" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103954</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252745-sc-2012-03-13T13:22:54Z-1310098</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609033</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#25" center_name="SC" accession="ERX113634"> <IDENTIFIERS> <PRIMARY_ID>ERX113634</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#25</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609116, constructed from sample accession ERS103955 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TGCGATCT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103955" refname="2042STDY5252746-sc-2012-03-13T13:22:54Z-1310099" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103955</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252746-sc-2012-03-13T13:22:54Z-1310099</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609116</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#26" center_name="SC" accession="ERX113635"> <IDENTIFIERS> <PRIMARY_ID>ERX113635</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#26</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609104, constructed from sample accession ERS103956 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TTCCTGCT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103956" refname="2042STDY5252747-sc-2012-03-13T13:22:55Z-1310100" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103956</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252747-sc-2012-03-13T13:22:55Z-1310100</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609104</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#27" center_name="SC" accession="ERX113636"> <IDENTIFIERS> <PRIMARY_ID>ERX113636</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#27</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609092, constructed from sample accession ERS103958 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TAGTGACT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103958" refname="2042STDY5252748-sc-2012-03-13T13:22:57Z-1310102" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103958</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252748-sc-2012-03-13T13:22:57Z-1310102</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609092</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#28" center_name="SC" accession="ERX113637"> <IDENTIFIERS> <PRIMARY_ID>ERX113637</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#28</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609080, constructed from sample accession ERS103961 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TACAGGAT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103961" refname="2042STDY5252749-sc-2012-03-13T13:23:00Z-1310105" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103961</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252749-sc-2012-03-13T13:23:00Z-1310105</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609080</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#29" center_name="SC" accession="ERX113638"> <IDENTIFIERS> <PRIMARY_ID>ERX113638</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#29</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609068, constructed from sample accession ERS103963 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TCCTCAAT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103963" refname="2042STDY5252750-sc-2012-03-13T13:23:02Z-1310107" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103963</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252750-sc-2012-03-13T13:23:02Z-1310107</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609068</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#30" center_name="SC" accession="ERX113639"> <IDENTIFIERS> <PRIMARY_ID>ERX113639</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#30</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609056, constructed from sample accession ERS103965 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TGTGGTTG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103965" refname="2042STDY5252751-sc-2012-03-13T13:23:03Z-1310109" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103965</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252751-sc-2012-03-13T13:23:03Z-1310109</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609056</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#31" center_name="SC" accession="ERX113640"> <IDENTIFIERS> <PRIMARY_ID>ERX113640</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#31</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609044, constructed from sample accession ERS103967 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TAGTCTTG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103967" refname="2042STDY5252752-sc-2012-03-13T13:23:05Z-1310111" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103967</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252752-sc-2012-03-13T13:23:05Z-1310111</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609044</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#32" center_name="SC" accession="ERX113641"> <IDENTIFIERS> <PRIMARY_ID>ERX113641</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#32</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609032, constructed from sample accession ERS103969 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TTCCATTG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103969" refname="2042STDY5252753-sc-2012-03-13T13:23:06Z-1310113" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103969</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252753-sc-2012-03-13T13:23:06Z-1310113</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609032</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#33" center_name="SC" accession="ERX113642"> <IDENTIFIERS> <PRIMARY_ID>ERX113642</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#33</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609115, constructed from sample accession ERS103970 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TCGAAGTG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103970" refname="2042STDY5252754-sc-2012-03-13T13:23:07Z-1310114" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103970</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252754-sc-2012-03-13T13:23:07Z-1310114</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609115</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#34" center_name="SC" accession="ERX113643"> <IDENTIFIERS> <PRIMARY_ID>ERX113643</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#34</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609103, constructed from sample accession ERS103974 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TAACGCTG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103974" refname="2042STDY5252755-sc-2012-03-13T13:23:10Z-1310118" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103974</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252755-sc-2012-03-13T13:23:10Z-1310118</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609103</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#35" center_name="SC" accession="ERX113644"> <IDENTIFIERS> <PRIMARY_ID>ERX113644</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#35</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609091, constructed from sample accession ERS103976 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TTGGTATG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103976" refname="2042STDY5252756-sc-2012-03-13T13:23:12Z-1310120" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103976</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252756-sc-2012-03-13T13:23:12Z-1310120</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609091</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#36" center_name="SC" accession="ERX113645"> <IDENTIFIERS> <PRIMARY_ID>ERX113645</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#36</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609079, constructed from sample accession ERS103977 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TGAACTGG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103977" refname="2042STDY5252757-sc-2012-03-13T13:23:13Z-1310121" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103977</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252757-sc-2012-03-13T13:23:13Z-1310121</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609079</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#37" center_name="SC" accession="ERX113646"> <IDENTIFIERS> <PRIMARY_ID>ERX113646</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#37</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609067, constructed from sample accession ERS103979 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TACTTCGG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103979" refname="2042STDY5252758-sc-2012-03-13T13:23:15Z-1310123" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103979</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252758-sc-2012-03-13T13:23:15Z-1310123</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609067</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#38" center_name="SC" accession="ERX113647"> <IDENTIFIERS> <PRIMARY_ID>ERX113647</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#38</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609055, constructed from sample accession ERS103981 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TCTCACGG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103981" refname="2042STDY5252759-sc-2012-03-13T13:23:16Z-1310125" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103981</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252759-sc-2012-03-13T13:23:16Z-1310125</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609055</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#39" center_name="SC" accession="ERX113648"> <IDENTIFIERS> <PRIMARY_ID>ERX113648</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#39</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609043, constructed from sample accession ERS103982 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TCAGGAGG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103982" refname="2042STDY5252760-sc-2012-03-13T13:23:17Z-1310126" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103982</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252760-sc-2012-03-13T13:23:17Z-1310126</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609043</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#40" center_name="SC" accession="ERX113649"> <IDENTIFIERS> <PRIMARY_ID>ERX113649</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#40</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609031, constructed from sample accession ERS103983 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TAAGTTCG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103983" refname="2042STDY5252761-sc-2012-03-13T13:23:18Z-1310127" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103983</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252761-sc-2012-03-13T13:23:18Z-1310127</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609031</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#41" center_name="SC" accession="ERX113650"> <IDENTIFIERS> <PRIMARY_ID>ERX113650</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#41</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609114, constructed from sample accession ERS103984 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TCCAGTCG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103984" refname="2042STDY5252762-sc-2012-03-13T13:23:19Z-1310128" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103984</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252762-sc-2012-03-13T13:23:19Z-1310128</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609114</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#42" center_name="SC" accession="ERX113651"> <IDENTIFIERS> <PRIMARY_ID>ERX113651</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#42</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609102, constructed from sample accession ERS103991 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TGTATGCG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103991" refname="2042STDY5252763-sc-2012-03-13T13:23:25Z-1310135" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103991</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252763-sc-2012-03-13T13:23:25Z-1310135</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609102</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_7790_4#43" center_name="SC" accession="ERX113652"> <IDENTIFIERS> <PRIMARY_ID>ERX113652</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_7790_4#43</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001040" refname="High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001040</PRIMARY_ID> <SUBMITTER_ID namespace="SC">High_resolution_QTL_mapping_in_an_outbred_population_of_mice_using_low_coverage_next_generation_sequencing-sc-2011-11-30T12:43:27Z-2042</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 4609090, constructed from sample accession ERS103993 for study accession ERP001040. This is part of an Illumina multiplexed sequencing run (7790_4). This submission includes reads tagged with the sequence TCATTGAG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS103993" refname="2042STDY5252764-sc-2012-03-13T13:23:27Z-1310137" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS103993</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2042STDY5252764-sc-2012-03-13T13:23:27Z-1310137</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>4609090</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="292" NOMINAL_SDEV="98"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> </EXPERIMENT_SET>