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<EXPERIMENT_SET xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
  <EXPERIMENT accession="ERX9291698" alias="E-MTAB-11760:Sample 2-ALL_DX_p" broker_name="ArrayExpress" center_name="European Bioinformatics Institute">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX9291698</PRIMARY_ID>
      <SUBMITTER_ID namespace="European Bioinformatics Institute">E-MTAB-11760:Sample 2-ALL_DX_p</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>STAG1 Mutations in Genetic Predisposition to Childhood hematological malignancies</TITLE>
    <STUDY_REF accession="ERP137693">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP137693</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJEB52940</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>STAG1 Mutations in Genetic Predisposition to Childhood hematological malignancies</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS12019259">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS12019259</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA14414251</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>Sample 2-ALL_DX_p</LIBRARY_NAME>
        <LIBRARY_STRATEGY>Targeted-Capture</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>Hybrid Selection</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Mononuclear cell by ficoll density purification of Bone Marrow samples DNA was extracted from cell pellets using the Promega kit WizardÂ® SV Genomic DNA Purification Systems. For library preparation we used the Illumina Nextera Flex for Enrichment protocol using IDT probes (custom panel 39 genes)</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 550</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>Experimental Factor: disease</TAG>
        <VALUE>childhood B acute lymphoblastic leukemia</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT accession="ERX9291697" alias="E-MTAB-11760:Sample 1-MDS_p" broker_name="ArrayExpress" center_name="European Bioinformatics Institute">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX9291697</PRIMARY_ID>
      <SUBMITTER_ID namespace="European Bioinformatics Institute">E-MTAB-11760:Sample 1-MDS_p</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>STAG1 Mutations in Genetic Predisposition to Childhood hematological malignancies</TITLE>
    <STUDY_REF accession="ERP137693">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP137693</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJEB52940</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>STAG1 Mutations in Genetic Predisposition to Childhood hematological malignancies</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS12019258">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS12019258</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA14414250</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>Sample 1-MDS_p</LIBRARY_NAME>
        <LIBRARY_STRATEGY>Targeted-Capture</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>Hybrid Selection</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Mononuclear cell by ficoll density purification of Bone Marrow samples DNA was extracted from cell pellets using the Promega kit WizardÂ® SV Genomic DNA Purification Systems. For library preparation we used the Illumina Nextera Flex for Enrichment protocol using IDT probes (custom panel 39 genes)</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 550</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>Experimental Factor: disease</TAG>
        <VALUE>myelodysplastic/myeloproliferative disease</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT accession="ERX9291699" alias="E-MTAB-11760:Sample 3-ALL_REM_p" broker_name="ArrayExpress" center_name="European Bioinformatics Institute">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX9291699</PRIMARY_ID>
      <SUBMITTER_ID namespace="European Bioinformatics Institute">E-MTAB-11760:Sample 3-ALL_REM_p</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>STAG1 Mutations in Genetic Predisposition to Childhood hematological malignancies</TITLE>
    <STUDY_REF accession="ERP137693">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP137693</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJEB52940</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>STAG1 Mutations in Genetic Predisposition to Childhood hematological malignancies</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS12019260">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS12019260</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA14414252</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>Sample 3-ALL_REM_p</LIBRARY_NAME>
        <LIBRARY_STRATEGY>Targeted-Capture</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>Hybrid Selection</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Mononuclear cell by ficoll density purification of Bone Marrow samples DNA was extracted from cell pellets using the Promega kit WizardÂ® SV Genomic DNA Purification Systems. For library preparation we used the Illumina Nextera Flex for Enrichment protocol using IDT probes (custom panel 39 genes)</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 550</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>Experimental Factor: disease</TAG>
        <VALUE>childhood B acute lymphoblastic leukemia</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
</EXPERIMENT_SET>
