ERP109315 PRJEB27255 ena-STUDY-IRHS-12-06-2018-07:39:33:052-533 Microbial assemblages associated to crop residues Crop residues are a crucial ecological niche having significant impact on agricultural ecosystems. Here, we investigated the dynamics of these communities in three plots during a two-year wheat-oilseed rape rotation experiment. We demonstrated that crop residues are a pivotal, shifting platform that should be took into account as a whole microbial ecosystem to manage residues-borne disease. Crop residues are a crucial ecological niche having significant impact on agricultural ecosystems. Here, we investigated the dynamics of these communities in three plots during a two-year wheat-oilseed rape rotation experiment. We demonstrated that crop residues are a pivotal, shifting platform that should be took into account as a whole microbial ecosystem to manage residues-borne disease. ENA-FIRST-PUBLIC 2018-11-30 ENA-LAST-UPDATE 2018-06-12