ERS12168676 SAMEA110069858 2697049 Severe acute respiratory syndrome coronavirus 2 Sequenced wastewater sample from Central WWTP Koper 1 Contains RNA extracts (sample codes) WW0354/21 Cq (N1) 33.6 Cq (N2) 33.89 DNA concentration (Qubit) 45.2 Date of amplification (ARTIC) 2021-06-14 Date of sending/transfer to sequencing location 2021-06-15 ENA-FIRST-PUBLIC 2023-06-01 ENA-LAST-UPDATE 2023-06-01 External Id SAMEA110069858 Forward file name WWD354-21AR-1_S5_R1_001.fastq.gz INSDC center alias National Institute of Biology INSDC center name national institute of biology INSDC first public 2023-06-01T00:19:37Z INSDC last update 2023-06-01T00:19:37Z INSDC status public No. replicate 1 Reverse file name WWD354-21AR-1_S5_R2_001.fastq.gz Sequenced where/how Department of Endocrinology, Diabetes and Metabolism, University Children's Hospital, University Medical Centre Ljubljana Storage location at NIB INEXTVIR -20 Submitter Id WW0354_21_AR_1 collection_date 2021-06-08 environment (biome) wastewater treatment plant influent environment (feature) wastewater treatment plant environment (material) wastewater treatment plant influent geographic location (country and/or sea) Slovenia geographic location (latitude) 46 geographic location (longitude) 15 investigation type virus project name Sequencing of Slovenian WW samples for SARS-CoV-2 variant detection sample name WW0354_21_AR_1 scientific_name Severe acute respiratory syndrome coronavirus 2 sequencing method Illumina wastewater/sludge environmental package wastewater/sludge ERS12168677 SAMEA110069859 2697049 Severe acute respiratory syndrome coronavirus 2 Sequenced wastewater sample from Central WWTP Koper 2 Contains RNA extracts (sample codes) WW0354/21 Cq (N1) 33.6 Cq (N2) 33.89 DNA concentration (Qubit) 44.4 Date of amplification (ARTIC) 2021-06-14 Date of sending/transfer to sequencing location 2021-06-15 ENA-FIRST-PUBLIC 2023-06-01 ENA-LAST-UPDATE 2023-06-01 External Id SAMEA110069859 Forward file name WWD354-21AR-2_S6_R1_001.fastq.gz INSDC center alias National Institute of Biology INSDC center name national institute of biology INSDC first public 2023-06-01T00:19:37Z INSDC last update 2023-06-01T00:19:37Z INSDC status public No. replicate 2 Reverse file name WWD354-21AR-2_S6_R2_001.fastq.gz Sequenced where/how Department of Endocrinology, Diabetes and Metabolism, University Children's Hospital, University Medical Centre Ljubljana Storage location at NIB INEXTVIR -20 Submitter Id WW0354_21_AR_2 collection_date 2021-06-08 environment (biome) wastewater treatment plant influent environment (feature) wastewater treatment plant environment (material) wastewater treatment plant influent geographic location (country and/or sea) Slovenia geographic location (latitude) 46 geographic location (longitude) 15 investigation type virus project name Sequencing of Slovenian WW samples for SARS-CoV-2 variant detection sample name WW0354_21_AR_2 scientific_name Severe acute respiratory syndrome coronavirus 2 sequencing method Illumina wastewater/sludge environmental package wastewater/sludge ERS12168678 SAMEA110069860 2697049 Severe acute respiratory syndrome coronavirus 2 Sequenced wastewater sample from Central WWTP Kranj 1 Contains RNA extracts (sample codes) WW0358/21 Cq (N1) 34.01 Cq (N2) 33.74 DNA concentration (Qubit) 62.6 Date of amplification (ARTIC) 2021-06-14 Date of sending/transfer to sequencing location 2021-06-15 ENA-FIRST-PUBLIC 2023-06-01 ENA-LAST-UPDATE 2023-06-01 External Id SAMEA110069860 Forward file name WWD358-21AR-1_S9_R1_001.fastq.gz INSDC center alias National Institute of Biology INSDC center name national institute of biology INSDC first public 2023-06-01T00:19:37Z INSDC last update 2023-06-01T00:19:37Z INSDC status public No. replicate 1 Reverse file name WWD358-21AR-1_S9_R2_001.fastq.gz Sequenced where/how Department of Endocrinology, Diabetes and Metabolism, University Children's Hospital, University Medical Centre Ljubljana Storage location at NIB INEXTVIR -20 Submitter Id WW0358_21_AR_1 collection_date 2021-06-08 environment (biome) wastewater treatment plant influent environment (feature) wastewater treatment plant environment (material) wastewater treatment plant influent geographic location (country and/or sea) Slovenia geographic location (latitude) 46 geographic location (longitude) 15 investigation type virus project name Sequencing of Slovenian WW samples for SARS-CoV-2 variant detection sample name WW0358_21_AR_1 scientific_name Severe acute respiratory syndrome coronavirus 2 sequencing method Illumina wastewater/sludge environmental package wastewater/sludge ERS12168679 SAMEA110069861 2697049 Severe acute respiratory syndrome coronavirus 2 Sequenced wastewater sample from Central WWTP Kranj 2 Contains RNA extracts (sample codes) WW0358/21 Cq (N1) 34.01 Cq (N2) 33.74 DNA concentration (Qubit) 62.0 Date of amplification (ARTIC) 2021-06-14 Date of sending/transfer to sequencing location 2021-06-15 ENA-FIRST-PUBLIC 2023-06-01 ENA-LAST-UPDATE 2023-06-01 External Id SAMEA110069861 Forward file name WWD358-21AR-2_S10_R1_001.fastq.gz INSDC center alias National Institute of Biology INSDC center name national institute of biology INSDC first public 2023-06-01T00:19:37Z INSDC last update 2023-06-01T00:19:37Z INSDC status public No. replicate 2 Reverse file name WWD358-21AR-2_S10_R2_001.fastq.gz Sequenced where/how Department of Endocrinology, Diabetes and Metabolism, University Children's Hospital, University Medical Centre Ljubljana Storage location at NIB INEXTVIR -20 Submitter Id WW0358_21_AR_2 collection_date 2021-06-08 environment (biome) wastewater treatment plant influent environment (feature) wastewater treatment plant environment (material) wastewater treatment plant influent geographic location (country and/or sea) Slovenia geographic location (latitude) 46 geographic location (longitude) 15 investigation type virus project name Sequencing of Slovenian WW samples for SARS-CoV-2 variant detection sample name WW0358_21_AR_2 scientific_name Severe acute respiratory syndrome coronavirus 2 sequencing method Illumina wastewater/sludge environmental package wastewater/sludge ERS12168680 SAMEA110069862 2697049 Severe acute respiratory syndrome coronavirus 2 Sequenced wastewater sample from Central WWTP Ljubljana 1 Contains RNA extracts (sample codes) WW0362/21 Cq (N1) 32.23 Cq (N2) 32.89 DNA concentration (Qubit) 43.6 Date of amplification (ARTIC) 2021-06-14 Date of sending/transfer to sequencing location 2021-06-15 ENA-FIRST-PUBLIC 2023-06-01 ENA-LAST-UPDATE 2023-06-01 External Id SAMEA110069862 Forward file name WWD362-21AR-1_S1_R1_001.fastq.gz INSDC center alias National Institute of Biology INSDC center name national institute of biology INSDC first public 2023-06-01T00:19:37Z INSDC last update 2023-06-01T00:19:37Z INSDC status public No. replicate 1 Reverse file name WWD362-21AR-1_S1_R2_001.fastq.gz Sequenced where/how Department of Endocrinology, Diabetes and Metabolism, University Children's Hospital, University Medical Centre Ljubljana Storage location at NIB INEXTVIR -20 Submitter Id WW0362_21_AR_1 collection_date 2021-06-10 environment (biome) wastewater treatment plant influent environment (feature) wastewater treatment plant environment (material) wastewater treatment plant influent geographic location (country and/or sea) Slovenia geographic location (latitude) 46 geographic location (longitude) 15 investigation type virus project name Sequencing of Slovenian WW samples for SARS-CoV-2 variant detection sample name WW0362_21_AR_1 scientific_name Severe acute respiratory syndrome coronavirus 2 sequencing method Illumina wastewater/sludge environmental package wastewater/sludge ERS12168681 SAMEA110069863 2697049 Severe acute respiratory syndrome coronavirus 2 Sequenced wastewater sample from Central WWTP Ljubljana 2 Contains RNA extracts (sample codes) WW0362/21 Cq (N1) 32.23 Cq (N2) 32.89 DNA concentration (Qubit) 47.4 Date of amplification (ARTIC) 2021-06-14 Date of sending/transfer to sequencing location 2021-06-15 ENA-FIRST-PUBLIC 2023-06-01 ENA-LAST-UPDATE 2023-06-01 External Id SAMEA110069863 Forward file name WWD362-21AR-2_S2_R1_001.fastq.gz INSDC center alias National Institute of Biology INSDC center name national institute of biology INSDC first public 2023-06-01T00:19:37Z INSDC last update 2023-06-01T00:19:37Z INSDC status public No. replicate 2 Reverse file name WWD362-21AR-2_S2_R2_001.fastq.gz Sequenced where/how Department of Endocrinology, Diabetes and Metabolism, University Children's Hospital, University Medical Centre Ljubljana Storage location at NIB INEXTVIR -20 Submitter Id WW0362_21_AR_2 collection_date 2021-06-10 environment (biome) wastewater treatment plant influent environment (feature) wastewater treatment plant environment (material) wastewater treatment plant influent geographic location (country and/or sea) Slovenia geographic location (latitude) 46 geographic location (longitude) 15 investigation type virus project name Sequencing of Slovenian WW samples for SARS-CoV-2 variant detection sample name WW0362_21_AR_2 scientific_name Severe acute respiratory syndrome coronavirus 2 sequencing method Illumina wastewater/sludge environmental package wastewater/sludge ERS12168682 SAMEA110069864 2697049 Severe acute respiratory syndrome coronavirus 2 Sequenced wastewater sample from Central WWTP Saleska dolina 1 Contains RNA extracts (sample codes) WW0364/21 Cq (N1) 36.15 Cq (N2) 35.93 DNA concentration (Qubit) 29.8 Date of amplification (ARTIC) 2021-06-14 Date of sending/transfer to sequencing location 2021-06-15 ENA-FIRST-PUBLIC 2023-06-01 ENA-LAST-UPDATE 2023-06-01 External Id SAMEA110069864 Forward file name WWD364-21AR-1_S7_R1_001.fastq.gz INSDC center alias National Institute of Biology INSDC center name national institute of biology INSDC first public 2023-06-01T00:19:37Z INSDC last update 2023-06-01T00:19:37Z INSDC status public No. replicate 1 Reverse file name WWD364-21AR-1_S7_R2_001.fastq.gz Sequenced where/how Department of Endocrinology, Diabetes and Metabolism, University Children's Hospital, University Medical Centre Ljubljana Storage location at NIB INEXTVIR -20 Submitter Id WW0364_21_AR_1 collection_date 2021-06-10 environment (biome) wastewater treatment plant influent environment (feature) wastewater treatment plant environment (material) wastewater treatment plant influent geographic location (country and/or sea) Slovenia geographic location (latitude) 46 geographic location (longitude) 15 investigation type virus project name Sequencing of Slovenian WW samples for SARS-CoV-2 variant detection sample name WW0364_21_AR_1 scientific_name Severe acute respiratory syndrome coronavirus 2 sequencing method Illumina wastewater/sludge environmental package wastewater/sludge ERS12168683 SAMEA110069865 2697049 Severe acute respiratory syndrome coronavirus 2 Sequenced wastewater sample from Central WWTP Saleska dolina 2 Contains RNA extracts (sample codes) WW0364/21 Cq (N1) 36.15 Cq (N2) 35.93 DNA concentration (Qubit) 30.0 Date of amplification (ARTIC) 2021-06-14 Date of sending/transfer to sequencing location 2021-06-15 ENA-FIRST-PUBLIC 2023-06-01 ENA-LAST-UPDATE 2023-06-01 External Id SAMEA110069865 Forward file name WWD364-21AR-2_S8_R1_001.fastq.gz INSDC center alias National Institute of Biology INSDC center name national institute of biology INSDC first public 2023-06-01T00:19:37Z INSDC last update 2023-06-01T00:19:37Z INSDC status public No. replicate 2 Reverse file name WWD364-21AR-2_S8_R2_001.fastq.gz Sequenced where/how Department of Endocrinology, Diabetes and Metabolism, University Children's Hospital, University Medical Centre Ljubljana Storage location at NIB INEXTVIR -20 Submitter Id WW0364_21_AR_2 collection_date 2021-06-10 environment (biome) wastewater treatment plant influent environment (feature) wastewater treatment plant environment (material) wastewater treatment plant influent geographic location (country and/or sea) Slovenia geographic location (latitude) 46 geographic location (longitude) 15 investigation type virus project name Sequencing of Slovenian WW samples for SARS-CoV-2 variant detection sample name WW0364_21_AR_2 scientific_name Severe acute respiratory syndrome coronavirus 2 sequencing method Illumina wastewater/sludge environmental package wastewater/sludge ERS12168684 SAMEA110069866 2697049 Severe acute respiratory syndrome coronavirus 2 Sequenced wastewater sample from Central WWTP Maribor 1 Contains RNA extracts (sample codes) WW0366/21 Cq (N1) 32.99 Cq (N2) 33.68 DNA concentration (Qubit) 40.4 Date of amplification (ARTIC) 2021-06-14 Date of sending/transfer to sequencing location 2021-06-15 ENA-FIRST-PUBLIC 2023-06-01 ENA-LAST-UPDATE 2023-06-01 External Id SAMEA110069866 Forward file name WWD366-21AR-1_S3_R1_001.fastq.gz INSDC center alias National Institute of Biology INSDC center name national institute of biology INSDC first public 2023-06-01T00:19:37Z INSDC last update 2023-06-01T00:19:37Z INSDC status public No. replicate 1 Reverse file name WWD366-21AR-1_S3_R2_001.fastq.gz Sequenced where/how Department of Endocrinology, Diabetes and Metabolism, University Children's Hospital, University Medical Centre Ljubljana Storage location at NIB INEXTVIR -20 Submitter Id WW0366_21_AR_1 collection_date 2021-06-10 environment (biome) wastewater treatment plant influent environment (feature) wastewater treatment plant environment (material) wastewater treatment plant influent geographic location (country and/or sea) Slovenia geographic location (latitude) 46 geographic location (longitude) 15 investigation type virus project name Sequencing of Slovenian WW samples for SARS-CoV-2 variant detection sample name WW0366_21_AR_1 scientific_name Severe acute respiratory syndrome coronavirus 2 sequencing method Illumina wastewater/sludge environmental package wastewater/sludge ERS12168685 SAMEA110069867 2697049 Severe acute respiratory syndrome coronavirus 2 Sequenced wastewater sample from Central WWTP Maribor 2 Contains RNA extracts (sample codes) WW0366/21 Cq (N1) 32.99 Cq (N2) 33.68 DNA concentration (Qubit) 39.0 Date of amplification (ARTIC) 2021-06-14 Date of sending/transfer to sequencing location 2021-06-15 ENA-FIRST-PUBLIC 2023-06-01 ENA-LAST-UPDATE 2023-06-01 External Id SAMEA110069867 Forward file name WWD366-21AR-2_S4_R1_001.fastq.gz INSDC center alias National Institute of Biology INSDC center name national institute of biology INSDC first public 2023-06-01T00:19:37Z INSDC last update 2023-06-01T00:19:37Z INSDC status public No. replicate 2 Reverse file name WWD366-21AR-2_S4_R2_001.fastq.gz Sequenced where/how Department of Endocrinology, Diabetes and Metabolism, University Children's Hospital, University Medical Centre Ljubljana Storage location at NIB INEXTVIR -20 Submitter Id WW0366_21_AR_2 collection_date 2021-06-10 environment (biome) wastewater treatment plant influent environment (feature) wastewater treatment plant environment (material) wastewater treatment plant influent geographic location (country and/or sea) Slovenia geographic location (latitude) 46 geographic location (longitude) 15 investigation type virus project name Sequencing of Slovenian WW samples for SARS-CoV-2 variant detection sample name WW0366_21_AR_2 scientific_name Severe acute respiratory syndrome coronavirus 2 sequencing method Illumina wastewater/sludge environmental package wastewater/sludge