ERS12282080 SAMEA110183274 2697049 Severe acute respiratory syndrome coronavirus 2 Sequenced wastewater sample from Central WWTP Ljubljana 1 Contains RNA extracts (sample codes) WW0429/22 p-EL Cq (N1) 30.19 Cq (N2) 29.71 DNA concentration (Qubit) 6.48 Date of amplification (ARTIC) 2022-06-09 ENA-FIRST-PUBLIC 2023-06-01 ENA-LAST-UPDATE 2023-06-01 External Id SAMEA110183274 Forward file name 429_22-01_S11_R1_001.fastq.gz INSDC center alias National Institute of Biology INSDC center name national institute of biology INSDC first public 2023-06-01T00:19:40Z INSDC last update 2023-06-01T00:19:40Z INSDC status public No. replicate 1 Reverse file name 429_22-01_S11_R2_001.fastq.gz Sequenced where/how Department of Endocrinology, Diabetes and Metabolism, University Children's Hospital, University Medical Centre Ljubljana Storage location at NIB INEXTVIR -20 Submitter Id WW0429_22_AR_1 collection_date 2022-06-07 environment (biome) wastewater treatment plant influent environment (feature) wastewater treatment plant environment (material) wastewater treatment plant influent geographic location (country and/or sea) Slovenia geographic location (latitude) 46 geographic location (longitude) 15 investigation type virus project name Sequencing of Slovenian WW samples for SARS-CoV-2 variant detection sample name WW0429_22_AR_1 scientific_name Severe acute respiratory syndrome coronavirus 2 sequencing method Illumina wastewater/sludge environmental package wastewater/sludge ERS12282081 SAMEA110183275 2697049 Severe acute respiratory syndrome coronavirus 2 Sequenced wastewater sample from Central WWTP Ljubljana 2 Contains RNA extracts (sample codes) WW0429/22 p-EL Cq (N1) 30.19 Cq (N2) 29.71 DNA concentration (Qubit) 10.3 Date of amplification (ARTIC) 2022-06-09 ENA-FIRST-PUBLIC 2023-06-01 ENA-LAST-UPDATE 2023-06-01 External Id SAMEA110183275 Forward file name 429_22-02_S12_R1_001.fastq.gz INSDC center alias National Institute of Biology INSDC center name national institute of biology INSDC first public 2023-06-01T00:19:40Z INSDC last update 2023-06-01T00:19:40Z INSDC status public No. replicate 2 Reverse file name 429_22-02_S12_R2_001.fastq.gz Sequenced where/how Department of Endocrinology, Diabetes and Metabolism, University Children's Hospital, University Medical Centre Ljubljana Storage location at NIB INEXTVIR -20 Submitter Id WW0429_22_AR_2 collection_date 2022-06-07 environment (biome) wastewater treatment plant influent environment (feature) wastewater treatment plant environment (material) wastewater treatment plant influent geographic location (country and/or sea) Slovenia geographic location (latitude) 46 geographic location (longitude) 15 investigation type virus project name Sequencing of Slovenian WW samples for SARS-CoV-2 variant detection sample name WW0429_22_AR_2 scientific_name Severe acute respiratory syndrome coronavirus 2 sequencing method Illumina wastewater/sludge environmental package wastewater/sludge ERS12282082 SAMEA110183276 2697049 Severe acute respiratory syndrome coronavirus 2 Sequenced wastewater sample from Central WWTP Kranj 1 Contains RNA extracts (sample codes) WW0435/22 p-EL Cq (N1) 31.81 Cq (N2) 31.11 DNA concentration (Qubit) 10 Date of amplification (ARTIC) 2022-06-09 ENA-FIRST-PUBLIC 2023-06-01 ENA-LAST-UPDATE 2023-06-01 External Id SAMEA110183276 Forward file name 435_22-01_S13_R1_001.fastq.gz INSDC center alias National Institute of Biology INSDC center name national institute of biology INSDC first public 2023-06-01T00:19:40Z INSDC last update 2023-06-01T00:19:40Z INSDC status public No. replicate 1 Reverse file name 435_22-01_S13_R2_001.fastq.gz Sequenced where/how Department of Endocrinology, Diabetes and Metabolism, University Children's Hospital, University Medical Centre Ljubljana Storage location at NIB INEXTVIR -20 Submitter Id WW0435_22_AR_1 collection_date 2022-06-07 environment (biome) wastewater treatment plant influent environment (feature) wastewater treatment plant environment (material) wastewater treatment plant influent geographic location (country and/or sea) Slovenia geographic location (latitude) 46 geographic location (longitude) 15 investigation type virus project name Sequencing of Slovenian WW samples for SARS-CoV-2 variant detection sample name WW0435_22_AR_1 scientific_name Severe acute respiratory syndrome coronavirus 2 sequencing method Illumina wastewater/sludge environmental package wastewater/sludge ERS12282083 SAMEA110183277 2697049 Severe acute respiratory syndrome coronavirus 2 Sequenced wastewater sample from Central WWTP Kranj 2 Contains RNA extracts (sample codes) WW0435/22 p-EL Cq (N1) 31.81 Cq (N2) 31.11 DNA concentration (Qubit) 6.7 Date of amplification (ARTIC) 2022-06-09 ENA-FIRST-PUBLIC 2023-06-01 ENA-LAST-UPDATE 2023-06-01 External Id SAMEA110183277 Forward file name 435_22-02_S14_R1_001.fastq.gz INSDC center alias National Institute of Biology INSDC center name national institute of biology INSDC first public 2023-06-01T00:19:40Z INSDC last update 2023-06-01T00:19:40Z INSDC status public No. replicate 2 Reverse file name 435_22-02_S14_R2_001.fastq.gz Sequenced where/how Department of Endocrinology, Diabetes and Metabolism, University Children's Hospital, University Medical Centre Ljubljana Storage location at NIB INEXTVIR -20 Submitter Id WW0435_22_AR_2 collection_date 2022-06-07 environment (biome) wastewater treatment plant influent environment (feature) wastewater treatment plant environment (material) wastewater treatment plant influent geographic location (country and/or sea) Slovenia geographic location (latitude) 46 geographic location (longitude) 15 investigation type virus project name Sequencing of Slovenian WW samples for SARS-CoV-2 variant detection sample name WW0435_22_AR_2 scientific_name Severe acute respiratory syndrome coronavirus 2 sequencing method Illumina wastewater/sludge environmental package wastewater/sludge ERS12282084 SAMEA110183278 2697049 Severe acute respiratory syndrome coronavirus 2 Sequenced wastewater sample from Central WWTP Maribor 1 Contains RNA extracts (sample codes) WW0439/22 p-EL Cq (N1) 31.33 Cq (N2) 30.99 DNA concentration (Qubit) 3.36 Date of amplification (ARTIC) 2022-06-09 ENA-FIRST-PUBLIC 2023-06-01 ENA-LAST-UPDATE 2023-06-01 External Id SAMEA110183278 Forward file name 439_22-01_S15_R1_001.fastq.gz INSDC center alias National Institute of Biology INSDC center name national institute of biology INSDC first public 2023-06-01T00:19:40Z INSDC last update 2023-06-01T00:19:40Z INSDC status public No. replicate 1 Reverse file name 439_22-01_S15_R2_001.fastq.gz Sequenced where/how Department of Endocrinology, Diabetes and Metabolism, University Children's Hospital, University Medical Centre Ljubljana Storage location at NIB INEXTVIR -20 Submitter Id WW0439_22_AR_1 collection_date 2022-06-07 environment (biome) wastewater treatment plant influent environment (feature) wastewater treatment plant environment (material) wastewater treatment plant influent geographic location (country and/or sea) Slovenia geographic location (latitude) 46 geographic location (longitude) 15 investigation type virus project name Sequencing of Slovenian WW samples for SARS-CoV-2 variant detection sample name WW0439_22_AR_1 scientific_name Severe acute respiratory syndrome coronavirus 2 sequencing method Illumina wastewater/sludge environmental package wastewater/sludge ERS12282085 SAMEA110183279 2697049 Severe acute respiratory syndrome coronavirus 2 Sequenced wastewater sample from Central WWTP Maribor 2 Contains RNA extracts (sample codes) WW0439/22 p-EL Cq (N1) 31.33 Cq (N2) 30.99 DNA concentration (Qubit) 3.66 Date of amplification (ARTIC) 2022-06-09 ENA-FIRST-PUBLIC 2023-06-01 ENA-LAST-UPDATE 2023-06-01 External Id SAMEA110183279 Forward file name 439_22-02_S16_R1_001.fastq.gz INSDC center alias National Institute of Biology INSDC center name national institute of biology INSDC first public 2023-06-01T00:19:40Z INSDC last update 2023-06-01T00:19:40Z INSDC status public No. replicate 2 Reverse file name 439_22-02_S16_R2_001.fastq.gz Sequenced where/how Department of Endocrinology, Diabetes and Metabolism, University Children's Hospital, University Medical Centre Ljubljana Storage location at NIB INEXTVIR -20 Submitter Id WW0439_22_AR_2 collection_date 2022-06-07 environment (biome) wastewater treatment plant influent environment (feature) wastewater treatment plant environment (material) wastewater treatment plant influent geographic location (country and/or sea) Slovenia geographic location (latitude) 46 geographic location (longitude) 15 investigation type virus project name Sequencing of Slovenian WW samples for SARS-CoV-2 variant detection sample name WW0439_22_AR_2 scientific_name Severe acute respiratory syndrome coronavirus 2 sequencing method Illumina wastewater/sludge environmental package wastewater/sludge