ERX150290 DNA_HE080_16S_rDNA <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>16S rDNA amplicon library sequenced on 454 GS FLX Titanium from feces from cephalosporins resistant individual 14</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="DNA_HE080" accession="ERS179298" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179298</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">DNA_HE080</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>DNA_HE080_16S_rDNA_lib7</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>BarCode</READ_TYPE> <EXPECTED_BASECALL_TABLE base_coord="5"> <BASECALL read_group_tag="" min_match="11" max_mismatch="0" match_edge="full">AGTACTACTAT</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>2</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Primer</READ_TYPE> <EXPECTED_BASECALL_TABLE base_coord="15"> <BASECALL read_group_tag="" min_match="20" max_mismatch="0">AGAGTTTGATCMTGGCTCAG</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>3</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <RELATIVE_ORDER follows_read_index="2"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="DNA_HE084_16S_rDNA" accession="ERX150291" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150291</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">DNA_HE084_16S_rDNA</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>16S rDNA amplicon library sequenced on 454 GS FLX Titanium from feces from individual 15</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="DNA_HE084" accession="ERS179299" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179299</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">DNA_HE084</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>DNA_HE084_16S_rDNA_lib8</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>BarCode</READ_TYPE> <EXPECTED_BASECALL_TABLE base_coord="5"> <BASECALL read_group_tag="" min_match="11" max_mismatch="0" match_edge="full">ACGTAGATCGT</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>2</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Primer</READ_TYPE> <EXPECTED_BASECALL_TABLE base_coord="15"> <BASECALL read_group_tag="" min_match="20" max_mismatch="0">AGAGTTTGATCMTGGCTCAG</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>3</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <RELATIVE_ORDER follows_read_index="2"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="DNA_HE089_16S_rDNA" accession="ERX150292" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150292</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">DNA_HE089_16S_rDNA</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>16S rDNA amplicon library sequenced on 454 GS FLX Titanium from feces from individual 16</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="DNA_HE089" accession="ERS179300" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179300</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">DNA_HE089</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>DNA_HE089_16S_rDNA_lib8</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>BarCode</READ_TYPE> <EXPECTED_BASECALL_TABLE base_coord="5"> <BASECALL read_group_tag="" min_match="11" max_mismatch="0" match_edge="full">ACGAGTAGACT</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>2</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Primer</READ_TYPE> <EXPECTED_BASECALL_TABLE base_coord="15"> <BASECALL read_group_tag="" min_match="20" max_mismatch="0">AGAGTTTGATCMTGGCTCAG</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>3</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <RELATIVE_ORDER follows_read_index="2"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="DNA_HE090_16S_rDNA" accession="ERX150293" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150293</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">DNA_HE090_16S_rDNA</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>16S rDNA amplicon library sequenced on 454 GS FLX Titanium from feces from cephalosporins resistant individual 17</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="DNA_HE090" accession="ERS179301" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179301</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">DNA_HE090</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>DNA_HE090_16S_rDNA_lib9</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>BarCode</READ_TYPE> <EXPECTED_BASECALL_TABLE base_coord="5"> <BASECALL read_group_tag="" min_match="11" max_mismatch="0" match_edge="full">ACGACACGTAT</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>2</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Primer</READ_TYPE> <EXPECTED_BASECALL_TABLE base_coord="15"> <BASECALL read_group_tag="" min_match="20" max_mismatch="0">AGAGTTTGATCMTGGCTCAG</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>3</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <RELATIVE_ORDER follows_read_index="2"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="DNA_HE091_16S_rDNA" accession="ERX150294" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150294</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">DNA_HE091_16S_rDNA</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>16S rDNA amplicon library sequenced on 454 GS FLX Titanium from feces from individual 18</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="DNA_HE093" accession="ERS179302" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179302</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">DNA_HE093</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>DNA_HE091_16S_rDNA_lib9</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>BarCode</READ_TYPE> <EXPECTED_BASECALL_TABLE base_coord="5"> <BASECALL read_group_tag="" min_match="11" max_mismatch="0" match_edge="full">ACTATACGAGT</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>2</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Primer</READ_TYPE> <EXPECTED_BASECALL_TABLE base_coord="15"> <BASECALL read_group_tag="" min_match="20" max_mismatch="0">AGAGTTTGATCMTGGCTCAG</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>3</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <RELATIVE_ORDER follows_read_index="2"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="DNA_HE093_16S_rDNA" accession="ERX150295" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150295</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">DNA_HE093_16S_rDNA</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>16S rDNA amplicon library sequenced on 454 GS FLX Titanium from feces from individual 19</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="DNA_HE097" accession="ERS179303" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179303</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">DNA_HE097</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>DNA_HE093_16S_rDNA_lib10</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>BarCode</READ_TYPE> <EXPECTED_BASECALL_TABLE base_coord="5"> <BASECALL read_group_tag="" min_match="0" max_mismatch="0" match_edge="full"/> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>2</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Primer</READ_TYPE> <EXPECTED_BASECALL_TABLE base_coord="15"> <BASECALL read_group_tag="" min_match="20" max_mismatch="0">AGAGTTTGATCMTGGCTCAG</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>3</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <RELATIVE_ORDER follows_read_index="2"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="DNA_HE103_16S_rDNA" accession="ERX150296" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150296</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">DNA_HE103_16S_rDNA</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>16S rDNA amplicon library sequenced on 454 GS FLX Titanium from feces from individual 20</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="DNA_HE103" accession="ERS179304" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179304</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">DNA_HE103</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>DNA_HE103_16S_rDNA_lib10</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>BarCode</READ_TYPE> <EXPECTED_BASECALL_TABLE base_coord="5"> <BASECALL read_group_tag="" min_match="11" max_mismatch="0" match_edge="full">ACGTAGATCGT</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>2</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Primer</READ_TYPE> <EXPECTED_BASECALL_TABLE base_coord="15"> <BASECALL read_group_tag="" min_match="20" max_mismatch="0">AGAGTTTGATCMTGGCTCAG</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>3</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <RELATIVE_ORDER follows_read_index="2"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="DNA_HE104_16S_rDNA" accession="ERX150297" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150297</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">DNA_HE104_16S_rDNA</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>16S rDNA amplicon library sequenced on 454 GS FLX Titanium from feces from cephalosporins resistant individual 21</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="DNA_HE104" accession="ERS179305" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179305</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">DNA_HE104</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>DNA_HE104_16S_rDNA_lib11</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>BarCode</READ_TYPE> <EXPECTED_BASECALL_TABLE base_coord="5"> <BASECALL read_group_tag="" min_match="11" max_mismatch="0" match_edge="full">ACGTACTGTGT</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>2</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Primer</READ_TYPE> <EXPECTED_BASECALL_TABLE base_coord="15"> <BASECALL read_group_tag="" min_match="20" max_mismatch="0">AGAGTTTGATCMTGGCTCAG</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>3</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <RELATIVE_ORDER follows_read_index="2"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="DNA_HE106_16S_rDNA" accession="ERX150298" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150298</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">DNA_HE106_16S_rDNA</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>16S rDNA amplicon library sequenced on 454 GS FLX Titanium from feces from individual 22</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="DNA_HE106" accession="ERS179306" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179306</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">DNA_HE106</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>DNA_HE106_16S_rDNA_lib11</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>BarCode</READ_TYPE> <EXPECTED_BASECALL_TABLE base_coord="5"> <BASECALL read_group_tag="" min_match="11" max_mismatch="0" match_edge="full">AGACTCGACGT</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>2</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Primer</READ_TYPE> <EXPECTED_BASECALL_TABLE base_coord="15"> <BASECALL read_group_tag="" min_match="20" max_mismatch="0">AGAGTTTGATCMTGGCTCAG</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>3</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <RELATIVE_ORDER follows_read_index="2"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="DNA_HE108_16S_rDNA" accession="ERX150299" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150299</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">DNA_HE108_16S_rDNA</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>16S rDNA amplicon library sequenced on 454 GS FLX Titanium from feces from individual 23</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="DNA_HE108" accession="ERS179307" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179307</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">DNA_HE108</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>DNA_HE108_16S_rDNA_lib12</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>BarCode</READ_TYPE> <EXPECTED_BASECALL_TABLE base_coord="5"> <BASECALL read_group_tag="" min_match="11" max_mismatch="0" match_edge="full">ACACTACTCGT</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>2</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Primer</READ_TYPE> <EXPECTED_BASECALL_TABLE base_coord="15"> <BASECALL read_group_tag="" min_match="20" max_mismatch="0">AGAGTTTGATCMTGGCTCAG</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>3</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <RELATIVE_ORDER follows_read_index="2"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="DNA_HE109_16S_rDNA" accession="ERX150300" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150300</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">DNA_HE109_16S_rDNA</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>16S rDNA amplicon library sequenced on 454 GS FLX Titanium from feces from individual 24</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="DNA_HE109" accession="ERS179308" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179308</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">DNA_HE109</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>DNA_HE109_16S_rDNA_lib12</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>BarCode</READ_TYPE> <EXPECTED_BASECALL_TABLE base_coord="5"> <BASECALL read_group_tag="" min_match="11" max_mismatch="0" match_edge="full">AGTACGAGAGT</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>2</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Primer</READ_TYPE> <EXPECTED_BASECALL_TABLE base_coord="15"> <BASECALL read_group_tag="" min_match="20" max_mismatch="0">AGAGTTTGATCMTGGCTCAG</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>3</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <RELATIVE_ORDER follows_read_index="2"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="DNA_HE113_16S_rDNA" accession="ERX150301" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150301</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">DNA_HE113_16S_rDNA</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>16S rDNA amplicon library sequenced on 454 GS FLX Titanium from feces from cephalosporins resistant individual 25</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="DNA_HE113" accession="ERS179309" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179309</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">DNA_HE113</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>DNA_HE113_16S_rDNA_lib13</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>BarCode</READ_TYPE> <EXPECTED_BASECALL_TABLE base_coord="5"> <BASECALL read_group_tag="" min_match="11" max_mismatch="0" match_edge="full">AGTAGACGTCT</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>2</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Primer</READ_TYPE> <EXPECTED_BASECALL_TABLE base_coord="15"> <BASECALL read_group_tag="" min_match="20" max_mismatch="0">AGAGTTTGATCMTGGCTCAG</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>3</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <RELATIVE_ORDER follows_read_index="2"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="DNA_HE135_16S_rDNA" accession="ERX150302" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150302</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">DNA_HE135_16S_rDNA</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>16S rDNA amplicon library sequenced on 454 GS FLX Titanium from feces from individual 26</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="DNA_HE135" accession="ERS179310" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179310</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">DNA_HE135</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>DNA_HE135_16S_rDNA_lib13</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>BarCode</READ_TYPE> <EXPECTED_BASECALL_TABLE base_coord="5"> <BASECALL read_group_tag="" min_match="11" max_mismatch="0" match_edge="full">ACGCGTCTAGT</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>2</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Primer</READ_TYPE> <EXPECTED_BASECALL_TABLE base_coord="15"> <BASECALL read_group_tag="" min_match="20" max_mismatch="0">AGAGTTTGATCMTGGCTCAG</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>3</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <RELATIVE_ORDER follows_read_index="2"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="DNA_HE137_16S_rDNA" accession="ERX150303" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150303</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">DNA_HE137_16S_rDNA</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>16S rDNA amplicon library sequenced on 454 GS FLX Titanium from feces from individual 27</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="DNA_HE137" accession="ERS179311" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179311</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">DNA_HE137</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>DNA_HE137_16S_rDNA_lib14</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>BarCode</READ_TYPE> <EXPECTED_BASECALL_TABLE base_coord="5"> <BASECALL read_group_tag="" min_match="11" max_mismatch="0" match_edge="full">ACTACGTCTCT</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>2</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Primer</READ_TYPE> <EXPECTED_BASECALL_TABLE base_coord="15"> <BASECALL read_group_tag="" min_match="20" max_mismatch="0">AGAGTTTGATCMTGGCTCAG</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>3</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <RELATIVE_ORDER follows_read_index="2"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="DNA_HE147_16S_rDNA" accession="ERX150304" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150304</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">DNA_HE147_16S_rDNA</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>16S rDNA amplicon library sequenced on 454 GS FLX Titanium from feces from individual 28</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="DNA_HE147" accession="ERS179312" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179312</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">DNA_HE147</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>DNA_HE147_16S_rDNA_lib14</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>BarCode</READ_TYPE> <EXPECTED_BASECALL_TABLE base_coord="5"> <BASECALL read_group_tag="" min_match="11" max_mismatch="0" match_edge="full">ACACGACGACT</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>2</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Primer</READ_TYPE> <EXPECTED_BASECALL_TABLE base_coord="15"> <BASECALL read_group_tag="" min_match="20" max_mismatch="0">AGAGTTTGATCMTGGCTCAG</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>3</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <RELATIVE_ORDER follows_read_index="2"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="DNA_HE157_16S_rDNA" accession="ERX150305" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150305</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">DNA_HE157_16S_rDNA</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>16S rDNA amplicon library sequenced on 454 GS FLX Titanium from feces from individual 29</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="DNA_HE157" accession="ERS179313" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179313</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">DNA_HE157</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>DNA_HE157_16S_rDNA_lib15</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>BarCode</READ_TYPE> <EXPECTED_BASECALL_TABLE base_coord="5"> <BASECALL read_group_tag="" min_match="11" max_mismatch="0" match_edge="full">ACACGTAGTAT</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>2</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Primer</READ_TYPE> <EXPECTED_BASECALL_TABLE base_coord="15"> <BASECALL read_group_tag="" min_match="20" max_mismatch="0">AGAGTTTGATCMTGGCTCAG</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>3</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <RELATIVE_ORDER follows_read_index="2"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="DNA_HE161_16S_rDNA" accession="ERX150306" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150306</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">DNA_HE161_16S_rDNA</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>16S rDNA amplicon library sequenced on 454 GS FLX Titanium from feces from individual 30</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="DNA_HE161" accession="ERS179314" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179314</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">DNA_HE161</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>DNA_HE161_16S_rDNA_lib15</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>BarCode</READ_TYPE> <EXPECTED_BASECALL_TABLE base_coord="5"> <BASECALL read_group_tag="" min_match="11" max_mismatch="0" match_edge="full">AGTACGAGAGT</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>2</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Primer</READ_TYPE> <EXPECTED_BASECALL_TABLE base_coord="15"> <BASECALL read_group_tag="" min_match="20" max_mismatch="0">AGAGTTTGATCMTGGCTCAG</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>3</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <RELATIVE_ORDER follows_read_index="2"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="DNA_HE163_16S_rDNA" accession="ERX150307" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150307</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">DNA_HE163_16S_rDNA</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>16S rDNA amplicon library sequenced on 454 GS FLX Titanium from feces from individual 31</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="DNA_HE163" accession="ERS179315" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179315</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">DNA_HE163</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>DNA_HE163_16S_rDNA_lib16</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>BarCode</READ_TYPE> <EXPECTED_BASECALL_TABLE base_coord="5"> <BASECALL read_group_tag="" min_match="11" max_mismatch="0" match_edge="full">ACTCGCGTCGT</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>2</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Primer</READ_TYPE> <EXPECTED_BASECALL_TABLE base_coord="15"> <BASECALL read_group_tag="" min_match="20" max_mismatch="0">AGAGTTTGATCMTGGCTCAG</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>3</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <RELATIVE_ORDER follows_read_index="2"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE001_1L_Metatranscritome" accession="ERX150308" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150308</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE001_1L_Metatranscritome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscritome library sequenced on 454 GS FLX Titanium from feces from cephalosporins resistant individual 1</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE001_1L" accession="ERS179316" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179316</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE001_1L</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE001_1L_Metatranscritome_lib16</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE001_c1_Metatranscritome" accession="ERX150309" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150309</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE001_c1_Metatranscritome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscritome library sequenced on 454 GS FLX Titanium from feces from cephalosporins resistant individual 1</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE001_c1" accession="ERS179317" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179317</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE001_c1</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE001_c1_Metatranscritome_lib17</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE002_c2_Metatranscritome" accession="ERX150310" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150310</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE002_c2_Metatranscritome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscritome library sequenced on 454 GS FLX Titanium from feces from individual 2</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE002_c2" accession="ERS179318" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179318</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE002_c2</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE002_c2_Metatranscritome_lib17</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE002_l2_Metatranscritome" accession="ERX150311" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150311</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE002_l2_Metatranscritome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscritome library sequenced on 454 GS FLX Titanium from feces from individual 2</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE002_l2" accession="ERS179319" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179319</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE002_l2</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE002_l2_Metatranscritome_lib18</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE012_12C_Metatranscritome" accession="ERX150312" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150312</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE012_12C_Metatranscritome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscritome library sequenced on 454 GS FLX Titanium from feces from individual 3</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE012_12C" accession="ERS179320" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179320</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE012_12C</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE012_12C_Metatranscritome_lib18</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE012_12L_Metatranscritome" accession="ERX150313" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150313</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE012_12L_Metatranscritome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscritome library sequenced on 454 GS FLX Titanium from feces from individual 3</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE012_12L" accession="ERS179321" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179321</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE012_12L</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE012_12L_Metatranscritome_lib19</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE014_14C_Metatranscritome" accession="ERX150314" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150314</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE014_14C_Metatranscritome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscritome library sequenced on 454 GS FLX Titanium from feces from individual 4</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE014_14C" accession="ERS179322" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179322</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE014_14C</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE014_14C_Metatranscritome_lib19</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE014_14L_Metatranscritome" accession="ERX150315" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150315</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE014_14L_Metatranscritome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscritome library sequenced on 454 GS FLX Titanium from feces from individual 4</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE014_14L" accession="ERS179323" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179323</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE014_14L</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE014_14L_Metatranscritome_lib19</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE014_c14_Metatranscritome" accession="ERX150316" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150316</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE014_c14_Metatranscritome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscritome library sequenced on 454 GS FLX Titanium from feces from individual 4</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE014_c14" accession="ERS179324" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179324</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE014_c14</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE014_c14_Metatranscritome_lib19</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE022_c22_Metatranscritome" accession="ERX150317" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150317</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE022_c22_Metatranscritome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscritome library sequenced on 454 GS FLX Titanium from feces from individual 5</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE022_c22" accession="ERS179325" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179325</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE022_c22</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE022_c22_Metatranscritome_lib19</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE022_l22_Metatranscritome" accession="ERX150318" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150318</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE022_l22_Metatranscritome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscritome library sequenced on 454 GS FLX Titanium from feces from individual 5</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE022_l22" accession="ERS179326" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179326</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE022_l22</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE022_l22_Metatranscritome_lib19</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE025_25C_Metatranscritome" accession="ERX150319" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150319</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE025_25C_Metatranscritome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscritome library sequenced on 454 GS FLX Titanium from feces from individual 6</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE025_25C" accession="ERS179327" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179327</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE025_25C</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE025_25C_Metatranscritome_lib19</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE025_Lreg6-25_Metatranscritome" accession="ERX150320" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150320</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE025_Lreg6-25_Metatranscritome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscritome library sequenced on 454 GS FLX Titanium from feces from individual 6</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE025_Lreg6-25" accession="ERS179328" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179328</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE025_Lreg6-25</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE025_Lreg6-25_Metatranscritome_lib19</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE050_50L_Metatranscritome" accession="ERX150321" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150321</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE050_50L_Metatranscritome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscritome library sequenced on 454 GS FLX Titanium from feces from individual 7</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE050_50L" accession="ERS179329" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179329</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE050_50L</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE050_50L_Metatranscritome_lib19</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE053_c53_Metatranscritome" accession="ERX150322" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150322</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE053_c53_Metatranscritome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscritome library sequenced on 454 GS FLX Titanium from feces from individual 8</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE053_c53" accession="ERS179330" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179330</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE053_c53</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE053_c53_Metatranscritome_lib19</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE053_l53_Metatranscritome" accession="ERX150323" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150323</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE053_l53_Metatranscritome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscritome library sequenced on 454 GS FLX Titanium from feces from individual 8</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE053_l53" accession="ERS179331" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179331</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE053_l53</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE053_l53_Metatranscritome_lib19</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE054_54C_Metatranscritome" accession="ERX150324" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150324</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE054_54C_Metatranscritome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscritome library sequenced on 454 GS FLX Titanium from feces from cephalosporins resistant individual 9</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE054_54C" accession="ERS179332" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179332</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE054_54C</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE054_54C_Metatranscritome_lib19</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE054_l54_Metatranscritome" accession="ERX150325" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150325</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE054_l54_Metatranscritome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscritome library sequenced on 454 GS FLX Titanium from feces from cephalosporins resistant individual 9</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE054_l54" accession="ERS179333" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179333</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE054_l54</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE054_l54_Metatranscritome_lib19</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE055_55C_Metatranscritome" accession="ERX150326" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150326</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE055_55C_Metatranscritome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscritome library sequenced on 454 GS FLX Titanium from feces from cephalosporins resistant individual 10</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE055_55C" accession="ERS179334" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179334</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE055_55C</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE055_55C_Metatranscritome_lib19</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE055_l55_Metatranscritome" accession="ERX150327" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150327</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE055_l55_Metatranscritome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscritome library sequenced on 454 GS FLX Titanium from feces from cephalosporins resistant individual 10</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE055_l55" accession="ERS179335" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179335</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE055_l55</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE055_l55_Metatranscritome_lib19</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE059_59C_Metatranscritome" accession="ERX150328" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150328</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE059_59C_Metatranscritome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscritome library sequenced on 454 GS FLX Titanium from feces from individual 11</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE059_59C" accession="ERS179336" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179336</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE059_59C</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE059_59C_Metatranscritome_lib19</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE059_Lreg3-59_Metatranscritome" accession="ERX150329" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150329</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE059_Lreg3-59_Metatranscritome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscritome library sequenced on 454 GS FLX Titanium from feces from individual 11</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE059_Lreg3-59" accession="ERS179337" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179337</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE059_Lreg3-59</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE059_Lreg3-59_Metatranscritome_lib19</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE071_c71_Metatranscritome" accession="ERX150330" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150330</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE071_c71_Metatranscritome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscritome library sequenced on 454 GS FLX Titanium from feces from individual 12</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE071_c71" accession="ERS179338" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179338</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE071_c71</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE071_c71_Metatranscritome_lib19</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE071_l71_Metatranscritome" accession="ERX150331" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150331</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE071_l71_Metatranscritome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscritome library sequenced on 454 GS FLX Titanium from feces from individual 12</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE071_l71" accession="ERS179339" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179339</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE071_l71</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE071_l71_Metatranscritome_lib19</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE077_77C_Metatranscritome" accession="ERX150332" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150332</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE077_77C_Metatranscritome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscritome library sequenced on 454 GS FLX Titanium from feces from individual 13</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE077_77C" accession="ERS179340" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179340</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE077_77C</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE077_77C_Metatranscritome_lib19</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE077_Lreg2-77_Metatranscritome" accession="ERX150333" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150333</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE077_Lreg2-77_Metatranscritome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscritome library sequenced on 454 GS FLX Titanium from feces from individual 13</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE077_Lreg2-77" accession="ERS179341" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179341</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE077_Lreg2-77</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE077_Lreg2-77_Metatranscritome_lib19</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE080_80C_Metatranscritome" accession="ERX150334" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150334</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE080_80C_Metatranscritome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscritome library sequenced on 454 GS FLX Titanium from feces from cephalosporins resistant individual 14</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE080_80C" accession="ERS179342" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179342</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE080_80C</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE080_80C_Metatranscritome_lib19</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE080_l80_Metatranscritome" accession="ERX150335" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150335</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE080_l80_Metatranscritome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscritome library sequenced on 454 GS FLX Titanium from feces from cephalosporins resistant individual 14</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE080_l80" accession="ERS179343" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179343</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE080_l80</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE080_l80_Metatranscritome_lib19</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE084_84C_Metatranscritome" accession="ERX150336" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150336</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE084_84C_Metatranscritome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscritome library sequenced on 454 GS FLX Titanium from feces from individual 15</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE084_84C" accession="ERS179344" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179344</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE084_84C</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE084_84C_Metatranscritome_lib19</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE084_Lreg4-84_Metatranscritome" accession="ERX150337" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150337</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE084_Lreg4-84_Metatranscritome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscritome library sequenced on 454 GS FLX Titanium from feces from individual 15</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE084_Lreg4-84" accession="ERS179345" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179345</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE084_Lreg4-84</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE084_Lreg4-84_Metatranscritome_lib19</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE089_89C_Metatranscritome" accession="ERX150338" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150338</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE089_89C_Metatranscritome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscritome library sequenced on 454 GS FLX Titanium from feces from individual 16</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE089_89C" accession="ERS179346" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179346</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE089_89C</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE089_89C_Metatranscritome_lib19</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE089_89L_Metatranscritome" accession="ERX150339" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150339</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE089_89L_Metatranscritome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscritome library sequenced on 454 GS FLX Titanium from feces from individual 16</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE089_89L" accession="ERS179347" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179347</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE089_89L</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE089_89L_Metatranscritome_lib19</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE090_90C_Metatranscritome" accession="ERX150340" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150340</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE090_90C_Metatranscritome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscritome library sequenced on 454 GS FLX Titanium from feces from cephalosporins resistant individual 17</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE090_90C" accession="ERS179348" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179348</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE090_90C</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE090_90C_Metatranscritome_lib19</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE090_Lreg5-90_Metatranscritome" accession="ERX150341" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150341</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE090_Lreg5-90_Metatranscritome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscritome library sequenced on 454 GS FLX Titanium from feces from cephalosporins resistant individual 17</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE090_Lreg5-90" accession="ERS179349" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179349</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE090_Lreg5-90</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE090_Lreg5-90_Metatranscritome_lib19</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE090_Lreg8-90_Metatranscritome" accession="ERX150342" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150342</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE090_Lreg8-90_Metatranscritome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscritome library sequenced on 454 GS FLX Titanium from feces from cephalosporins resistant individual 17</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE090_Lreg8-90" accession="ERS179350" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179350</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE090_Lreg8-90</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE090_Lreg8-90_Metatranscritome_lib19</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE091_91C_Metatranscritome" accession="ERX150343" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150343</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE091_91C_Metatranscritome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscritome library sequenced on 454 GS FLX Titanium from feces from individual 18</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE091_91C" accession="ERS179351" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179351</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE091_91C</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE091_91C_Metatranscritome_lib19</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE091_Lreg7-91_Metatranscritome" accession="ERX150344" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150344</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE091_Lreg7-91_Metatranscritome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscritome library sequenced on 454 GS FLX Titanium from feces from individual 18</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE091_Lreg7-91" accession="ERS179352" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179352</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE091_Lreg7-91</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE091_Lreg7-91_Metatranscritome_lib19</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE093_93C_Metatranscritome" accession="ERX150345" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150345</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE093_93C_Metatranscritome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscritome library sequenced on 454 GS FLX Titanium from feces from individual 19</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE093_93C" accession="ERS179353" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179353</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE093_93C</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE093_93C_Metatranscritome_lib19</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE093_Lreg1-93_Metatranscritome" accession="ERX150346" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150346</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE093_Lreg1-93_Metatranscritome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscritome library sequenced on 454 GS FLX Titanium from feces from individual 19</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE093_Lreg1-93" accession="ERS179354" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179354</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE093_Lreg1-93</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE093_Lreg1-93_Metatranscritome_lib19</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE103_103C_Metatranscritome" accession="ERX150347" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150347</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE103_103C_Metatranscritome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscritome library sequenced on 454 GS FLX Titanium from feces from individual 20</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE103_103C" accession="ERS179355" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179355</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE103_103C</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE103_103C_Metatranscritome_lib19</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE103_Lreg3-103_Metatranscritome" accession="ERX150348" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150348</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE103_Lreg3-103_Metatranscritome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscritome library sequenced on 454 GS FLX Titanium from feces from individual 20</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE103_Lreg3-103" accession="ERS179356" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179356</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE103_Lreg3-103</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE103_Lreg3-103_Metatranscritome_lib19</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE104_104C_Metatranscritome" accession="ERX150349" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150349</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE104_104C_Metatranscritome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscritome library sequenced on 454 GS FLX Titanium from feces from cephalosporins resistant individual 21</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE104_104C" accession="ERS179357" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179357</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE104_104C</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE104_104C_Metatranscritome_lib19</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE104_l104_Metatranscritome" accession="ERX150350" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150350</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE104_l104_Metatranscritome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscritome library sequenced on 454 GS FLX Titanium from feces from cephalosporins resistant individual 21</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE104_l104" accession="ERS179358" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179358</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE104_l104</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE104_l104_Metatranscritome_lib19</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE106_106C_Metatranscritome" accession="ERX150351" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150351</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE106_106C_Metatranscritome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscritome library sequenced on 454 GS FLX Titanium from feces from individual 22</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE106_106C" accession="ERS179359" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179359</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE106_106C</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE106_106C_Metatranscritome_lib19</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE106_Lreg5-106_Metatranscritome" accession="ERX150352" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150352</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE106_Lreg5-106_Metatranscritome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscritome library sequenced on 454 GS FLX Titanium from feces from individual 22</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE106_Lreg5-106" accession="ERS179360" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179360</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE106_Lreg5-106</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE106_Lreg5-106_Metatranscritome_lib19</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE106_Lreg8-106_Metatranscritome" accession="ERX150353" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150353</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE106_Lreg8-106_Metatranscritome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscritome library sequenced on 454 GS FLX Titanium from feces from individual 22</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE106_Lreg8-106" accession="ERS179361" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179361</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE106_Lreg8-106</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE106_Lreg8-106_Metatranscritome_lib19</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE108_108C_Metatranscritome" accession="ERX150354" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150354</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE108_108C_Metatranscritome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscritome library sequenced on 454 GS FLX Titanium from feces from individual 23</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE108_108C" accession="ERS179362" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179362</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE108_108C</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE108_108C_Metatranscritome_lib19</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE108_Lreg2-108_Metatranscritome" accession="ERX150355" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150355</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE108_Lreg2-108_Metatranscritome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscritome library sequenced on 454 GS FLX Titanium from feces from individual 23</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE108_Lreg2-108" accession="ERS179363" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179363</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE108_Lreg2-108</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE108_Lreg2-108_Metatranscritome_lib19</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE109_109C_Metatranscritome" accession="ERX150356" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150356</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE109_109C_Metatranscritome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscritome library sequenced on 454 GS FLX Titanium from feces from individual 24</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE109_109C" accession="ERS179364" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179364</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE109_109C</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE109_109C_Metatranscritome_lib19</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE109_Lreg1-109_Metatranscritome" accession="ERX150357" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150357</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE109_Lreg1-109_Metatranscritome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscritome library sequenced on 454 GS FLX Titanium from feces from individual 24</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE109_Lreg1-109" accession="ERS179365" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179365</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE109_Lreg1-109</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE109_Lreg1-109_Metatranscritome_lib19</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE113_113C_Metatranscritome" accession="ERX150358" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150358</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE113_113C_Metatranscritome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscritome library sequenced on 454 GS FLX Titanium from feces from cephalosporins resistant individual 25</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE113_113C" accession="ERS179366" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179366</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE113_113C</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE113_113C_Metatranscritome_lib19</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE113_Lreg4-113_Metatranscritome" accession="ERX150359" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150359</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE113_Lreg4-113_Metatranscritome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscritome library sequenced on 454 GS FLX Titanium from feces from cephalosporins resistant individual 25</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE113_Lreg4-113" accession="ERS179367" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179367</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE113_Lreg4-113</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE113_Lreg4-113_Metatranscritome_lib19</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE113_Lreg8-113_Metatranscritome" accession="ERX150360" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150360</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE113_Lreg8-113_Metatranscritome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscritome library sequenced on 454 GS FLX Titanium from feces from cephalosporins resistant individual 25</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE113_Lreg8-113" accession="ERS179368" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179368</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE113_Lreg8-113</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE113_Lreg8-113_Metatranscritome_lib19</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE135_135C_Metatranscritome" accession="ERX150361" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150361</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE135_135C_Metatranscritome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscritome library sequenced on 454 GS FLX Titanium from feces from individual 26</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE135_135C" accession="ERS179369" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179369</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE135_135C</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE135_135C_Metatranscritome_lib19</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE135_135L_Metatranscritome" accession="ERX150362" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150362</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE135_135L_Metatranscritome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscritome library sequenced on 454 GS FLX Titanium from feces from individual 26</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE135_135L" accession="ERS179370" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179370</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE135_135L</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE135_135L_Metatranscritome_lib19</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE137_137C_Metatranscritome" accession="ERX150363" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150363</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE137_137C_Metatranscritome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscritome library sequenced on 454 GS FLX Titanium from feces from individual 27</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE137_137C" accession="ERS179371" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179371</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE137_137C</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE137_137C_Metatranscritome_lib19</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE137_Lreg6-137_Metatranscritome" accession="ERX150364" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150364</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE137_Lreg6-137_Metatranscritome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscritome library sequenced on 454 GS FLX Titanium from feces from individual 27</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE137_Lreg6-137" accession="ERS179372" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179372</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE137_Lreg6-137</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE137_Lreg6-137_Metatranscritome_lib19</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE147_147C_Metatranscritome" accession="ERX150365" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150365</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE147_147C_Metatranscritome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscritome library sequenced on 454 GS FLX Titanium from feces from individual 28</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE147_147C" accession="ERS179373" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179373</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE147_147C</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE147_147C_Metatranscritome_lib19</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE147_Lreg2-147_Metatranscritome" accession="ERX150366" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150366</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE147_Lreg2-147_Metatranscritome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscritome library sequenced on 454 GS FLX Titanium from feces from individual 28</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE147_Lreg2-147" accession="ERS179374" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179374</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE147_Lreg2-147</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE147_Lreg2-147_Metatranscritome_lib19</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE157_157C_Metatranscritome" accession="ERX150367" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150367</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE157_157C_Metatranscritome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscritome library sequenced on 454 GS FLX Titanium from feces from individual 29</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE157_157C" accession="ERS179375" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179375</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE157_157C</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE157_157C_Metatranscritome_lib19</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE157_Lreg6-157_Metatranscritome" accession="ERX150368" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150368</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE157_Lreg6-157_Metatranscritome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscritome library sequenced on 454 GS FLX Titanium from feces from individual 29</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE157_Lreg6-157" accession="ERS179376" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179376</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE157_Lreg6-157</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE157_Lreg6-157_Metatranscritome_lib19</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE161_161C_Metatranscriptome" accession="ERX150369" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150369</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE161_161C_Metatranscriptome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscriptome library sequenced on 454 GS FLX Titanium from feces from individual 30</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE161_161C" accession="ERS179377" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179377</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE161_161C</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE161_161C_Metatranscriptome_lib19</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE161_Lreg7-161_Metatranscriptome" accession="ERX150370" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150370</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE161_Lreg7-161_Metatranscriptome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscriptome library sequenced on 454 GS FLX Titanium from feces from individual 30</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE161_Lreg7-161" accession="ERS179378" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179378</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE161_Lreg7-161</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE161_Lreg7-161_Metatranscriptome_lib19</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE163_163C_Metatranscriptome" accession="ERX150371" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150371</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE163_163C_Metatranscriptome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscriptome library sequenced on 454 GS FLX Titanium from feces from individual 31</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE163_163C" accession="ERS179379" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179379</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE163_163C</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE163_163C_Metatranscriptome_lib19</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="RNA_HE163_Lreg1-163_Metatranscriptome" accession="ERX150372" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150372</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE163_Lreg1-163_Metatranscriptome</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Metatranscriptome library sequenced on 454 GS FLX Titanium from feces from individual 31</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="RNA_HE163_Lreg1-163" accession="ERS179380" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179380</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">RNA_HE163_Lreg1-163</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>RNA_HE163_Lreg1-163_Metatranscriptome_lib19</LIBRARY_NAME> <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY> <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>5</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="DNA_HE001_16S_rDNA" accession="ERX150277" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150277</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">DNA_HE001_16S_rDNA</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>16S rDNA amplicon library sequenced on 454 GS FLX Titanium from feces from cephalosporins resistant individual 1</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="DNA_HE001" accession="ERS179285" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179285</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">DNA_HE001</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>DNA_HE001_16S_rDNA_lib1</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>BarCode</READ_TYPE> <EXPECTED_BASECALL_TABLE base_coord="5"> <BASECALL read_group_tag="" min_match="11" max_mismatch="0" match_edge="full">ACGTAGATCGT</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>2</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Primer</READ_TYPE> <EXPECTED_BASECALL_TABLE base_coord="15"> <BASECALL read_group_tag="" min_match="20" max_mismatch="0" match_edge="full">AGAGTTTGATCMTGGCTCAG</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>3</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <RELATIVE_ORDER follows_read_index="2"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="DNA_HE002_16S_rDNA" accession="ERX150278" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150278</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">DNA_HE002_16S_rDNA</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>16S rDNA amplicon library sequenced on 454 GS FLX Titanium from feces from individual 2</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="DNA_HE002" accession="ERS179286" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179286</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">DNA_HE002</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>DNA_HE002_16S_rDNA_lib1</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>BarCode</READ_TYPE> <EXPECTED_BASECALL_TABLE base_coord="5"> <BASECALL read_group_tag="" min_match="11" max_mismatch="0" match_edge="full">ACACGACGACT</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>2</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Primer</READ_TYPE> <EXPECTED_BASECALL_TABLE base_coord="15"> <BASECALL read_group_tag="" min_match="20" max_mismatch="0">AGAGTTTGATCMTGGCTCAG</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>3</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <RELATIVE_ORDER follows_read_index="2"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="DNA_HE012_16S_rDNA" accession="ERX150279" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150279</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">DNA_HE012_16S_rDNA</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>16S rDNA amplicon library sequenced on 454 GS FLX Titanium from feces from individual 3</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="DNA_HE012" accession="ERS179287" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179287</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">DNA_HE012</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>DNA_HE012_16S_rDNA_lib2</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>BarCode</READ_TYPE> <EXPECTED_BASECALL_TABLE base_coord="5"> <BASECALL read_group_tag="" min_match="11" max_mismatch="0" match_edge="full">ACGCGTCTAGT</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>2</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Primer</READ_TYPE> <EXPECTED_BASECALL_TABLE base_coord="15"> <BASECALL read_group_tag="" min_match="20" max_mismatch="0">AGAGTTTGATCMTGGCTCAG</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>3</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <RELATIVE_ORDER follows_read_index="2"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="DNA_HE014_16S_rDNA" accession="ERX150280" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150280</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">DNA_HE014_16S_rDNA</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>16S rDNA amplicon library sequenced on 454 GS FLX Titanium from feces from individual 4</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="DNA_HE014" accession="ERS179288" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179288</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">DNA_HE014</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>DNA_HE014_16S_rDNA_lib2</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>BarCode</READ_TYPE> <EXPECTED_BASECALL_TABLE base_coord="5"> <BASECALL read_group_tag="" min_match="11" max_mismatch="0" match_edge="full">ACTACGTCTCT</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>2</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Primer</READ_TYPE> <EXPECTED_BASECALL_TABLE base_coord="15"> <BASECALL read_group_tag="" min_match="20" max_mismatch="0">AGAGTTTGATCMTGGCTCAG</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>3</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <RELATIVE_ORDER follows_read_index="2"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="DNA_HE022_16S_rDNA" accession="ERX150281" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150281</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">DNA_HE022_16S_rDNA</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>16S rDNA amplicon library sequenced on 454 GS FLX Titanium from feces from individual 5</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="DNA_HE022" accession="ERS179289" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179289</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">DNA_HE022</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>DNA_HE022_16S_rDNA_lib3</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>BarCode</READ_TYPE> <EXPECTED_BASECALL_TABLE base_coord="5"> <BASECALL read_group_tag="" min_match="11" max_mismatch="0" match_edge="full">ACACTACTCGT</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>2</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Primer</READ_TYPE> <EXPECTED_BASECALL_TABLE base_coord="15"> <BASECALL read_group_tag="" min_match="0">AGAGTTTGATCMTGGCTCAG</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>3</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <RELATIVE_ORDER follows_read_index="2"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="DNA_HE025_16S_rDNA" accession="ERX150282" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150282</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">DNA_HE025_16S_rDNA</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>16S rDNA amplicon library sequenced on 454 GS FLX Titanium from feces from individual 6</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="DNA_HE025" accession="ERS179290" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179290</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">DNA_HE025</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>DNA_HE025_16S_rDNA_lib3</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>BarCode</READ_TYPE> <EXPECTED_BASECALL_TABLE base_coord="5"> <BASECALL read_group_tag="" min_match="11" max_mismatch="0" match_edge="full">ACTCGCGTCGT</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>2</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Primer</READ_TYPE> <EXPECTED_BASECALL_TABLE base_coord="15"> <BASECALL read_group_tag="" min_match="20" max_mismatch="0">AGAGTTTGATCMTGGCTCAG</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>3</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <RELATIVE_ORDER follows_read_index="2"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="DNA_HE050_16S_rDNA" accession="ERX150283" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150283</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">DNA_HE050_16S_rDNA</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>16S rDNA amplicon library sequenced on 454 GS FLX Titanium from feces from individual 7</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="DNA_HE050" accession="ERS179291" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179291</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">DNA_HE050</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>DNA_HE050_16S_rDNA_lib4</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>BarCode</READ_TYPE> <EXPECTED_BASECALL_TABLE base_coord="5"> <BASECALL read_group_tag="" min_match="11" max_mismatch="0" match_edge="full">ACACGTAGTAT</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>2</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Primer</READ_TYPE> <EXPECTED_BASECALL_TABLE base_coord="15"> <BASECALL read_group_tag="" min_match="20" max_mismatch="0">AGAGTTTGATCMTGGCTCAG</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>3</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <RELATIVE_ORDER follows_read_index="2"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="DNA_HE053_16S_rDNA" accession="ERX150284" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150284</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">DNA_HE053_16S_rDNA</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>16S rDNA amplicon library sequenced on 454 GS FLX Titanium from feces from individual 8</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="DNA_HE053" accession="ERS179292" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179292</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">DNA_HE053</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>DNA_HE053_16S_rDNA_lib4</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>BarCode</READ_TYPE> <EXPECTED_BASECALL_TABLE base_coord="5"> <BASECALL read_group_tag="" min_match="11" max_mismatch="0" match_edge="full">ACGACACGTAT</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>2</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Primer</READ_TYPE> <EXPECTED_BASECALL_TABLE base_coord="15"> <BASECALL read_group_tag="" min_match="20" max_mismatch="0">AGAGTTTGATCMTGGCTCAG</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>3</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <RELATIVE_ORDER follows_read_index="2"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="DNA_HE054_16S_rDNA" accession="ERX150285" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150285</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">DNA_HE054_16S_rDNA</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>16S rDNA amplicon library sequenced on 454 GS FLX Titanium from feces from cephalosporins resistant individual 9</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="DNA_HE054" accession="ERS179293" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179293</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">DNA_HE054</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>DNA_HE054_16S_rDNA_lib5</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>BarCode</READ_TYPE> <EXPECTED_BASECALL_TABLE base_coord="5"> <BASECALL read_group_tag="" min_match="11" max_mismatch="0" match_edge="full">ACGAGTAGACT</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>2</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Primer</READ_TYPE> <EXPECTED_BASECALL_TABLE base_coord="15"> <BASECALL read_group_tag="" min_match="20" max_mismatch="0">AGAGTTTGATCMTGGCTCAG</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>3</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <RELATIVE_ORDER follows_read_index="2"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="DNA_HE055_16S_rDNA" accession="ERX150286" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150286</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">DNA_HE055_16S_rDNA</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>16S rDNA amplicon library sequenced on 454 GS FLX Titanium from feces from cephalosporins resistant individual 10</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="DNA_HE055" accession="ERS179294" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179294</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">DNA_HE055</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>DNA_HE055_16S_rDNA_lib5</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>BarCode</READ_TYPE> <EXPECTED_BASECALL_TABLE base_coord="5"> <BASECALL read_group_tag="" min_match="11" max_mismatch="0" match_edge="full">ACGTACTGTGT</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>2</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Primer</READ_TYPE> <EXPECTED_BASECALL_TABLE base_coord="15"> <BASECALL read_group_tag="" min_match="20" max_mismatch="0">AGAGTTTGATCMTGGCTCAG</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>3</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <RELATIVE_ORDER follows_read_index="2"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="DNA_HE059_16S_rDNA" accession="ERX150287" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150287</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">DNA_HE059_16S_rDNA</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>16S rDNA amplicon library sequenced on 454 GS FLX Titanium from feces from individual 11</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="DNA_HE059" accession="ERS179295" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179295</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">DNA_HE059</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>DNA_HE059_16S_rDNA_lib6</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>BarCode</READ_TYPE> <EXPECTED_BASECALL_TABLE base_coord="5"> <BASECALL read_group_tag="" min_match="11" max_mismatch="0" match_edge="full">AGACTCGACGT</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>2</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Primer</READ_TYPE> <EXPECTED_BASECALL_TABLE base_coord="15"> <BASECALL read_group_tag="" min_match="20" max_mismatch="0">AGAGTTTGATCMTGGCTCAG</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>3</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <RELATIVE_ORDER follows_read_index="2"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="DNA_HE071_16S_rDNA" accession="ERX150288" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150288</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">DNA_HE071_16S_rDNA</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>16S rDNA amplicon library sequenced on 454 GS FLX Titanium from feces from individual 12</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="DNA_HE071" accession="ERS179296" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179296</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">DNA_HE071</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>DNA_HE071_16S_rDNA_lib6</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>BarCode</READ_TYPE> <EXPECTED_BASECALL_TABLE base_coord="5"> <BASECALL read_group_tag="" min_match="11" max_mismatch="0" match_edge="full">ACTATACGAGT</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>2</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Primer</READ_TYPE> <EXPECTED_BASECALL_TABLE base_coord="15"> <BASECALL read_group_tag="" min_match="20" max_mismatch="0">AGAGTTTGATCMTGGCTCAG</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>3</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <RELATIVE_ORDER follows_read_index="2"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="DNA_HE077_16S_rDNA" accession="ERX150289" center_name="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERX150289</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">DNA_HE077_16S_rDNA</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF refname="Antibiotic resistance in amerindian gut microbiome" accession="ERP001842" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERP001842</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">Antibiotic resistance in amerindian gut microbiome</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>16S rDNA amplicon library sequenced on 454 GS FLX Titanium from feces from individual 13</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="DNA_HE077" accession="ERS179297" refcenter="CSISP"> <IDENTIFIERS> <PRIMARY_ID>ERS179297</PRIMARY_ID> <SUBMITTER_ID namespace="CSISP">DNA_HE077</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>DNA_HE077_16S_rDNA_lib7</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Adapter</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>BarCode</READ_TYPE> <EXPECTED_BASECALL_TABLE base_coord="5"> <BASECALL read_group_tag="" min_match="11" max_mismatch="0" match_edge="full">ACGTACACACT</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>2</READ_INDEX> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>Primer</READ_TYPE> <EXPECTED_BASECALL_TABLE base_coord="15"> <BASECALL read_group_tag="" min_match="20" max_mismatch="0">AGAGTTTGATCMTGGCTCAG</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>3</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <RELATIVE_ORDER follows_read_index="2"/> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <LS454> <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL> </LS454> </PLATFORM> <PROCESSING/> </EXPERIMENT> </EXPERIMENT_SET>