ERS12855583 SAMEA110757973 562 Escherichia coli The whole genome of Escherichia coli CRE strain 163A9 was isolated and sequenced. Cultivation was done for approx. 16h in LB medium w/ 100 ug/ml carbenicllin (see Methods). gDNA was isolated and sequenced by long reads (PacBio) and assembled by flye 2.7.1-b1590 (default parameters). ENA-FIRST-PUBLIC 2022-08-30 ENA-LAST-UPDATE 2022-08-30 External Id SAMEA110757973 INSDC center alias Insitut Pasteur INSDC center name insitut pasteur INSDC first public 2022-08-30T16:14:05Z INSDC last update 2022-08-30T16:14:05Z INSDC status public Submitter Id 163A9_genome sample name 163A9_genome ERS12855584 SAMEA110757974 550 Enterobacter cloacae Integrated prophages and phage-plasmids of Enterobacter cloacae CRE strain 169C2 were induced by MMC addition in exponential phages (2h after cultivation start, see Methods). Phages were isolated, the DNA extracted and sequenced by short reads (Illumina). The short reads from the MMC induction experiment and the long reads of the genome sequencing were cmobined in a hybrid assembly using unicycler v0.4.8 (default). ENA-FIRST-PUBLIC 2022-08-30 ENA-LAST-UPDATE 2022-08-30 External Id SAMEA110757974 INSDC center alias Insitut Pasteur INSDC center name insitut pasteur INSDC first public 2022-08-30T16:14:05Z INSDC last update 2022-08-30T16:14:05Z INSDC status public Submitter Id 169C2_hybrid sample name 169C2_hybrid ERS12855585 SAMEA110757975 550 Enterobacter cloacae Integrated prophages and phage-plasmids of Enterobacter cloacae CRE strain 170E2 were induced by MMC addition in exponential phages (2h after cultivation start, see Methods). Phages were isolated, the DNA extracted and sequenced by short reads (Illumina). The short reads from the MMC induction experiment and the long reads of the genome sequencing were cmobined in a hybrid assembly using unicycler v0.4.8 (default). ENA-FIRST-PUBLIC 2022-08-30 ENA-LAST-UPDATE 2022-08-30 External Id SAMEA110757975 INSDC center alias Insitut Pasteur INSDC center name insitut pasteur INSDC first public 2022-08-30T16:14:05Z INSDC last update 2022-08-30T16:14:05Z INSDC status public Submitter Id 170E2_hybrid sample name 170E2_hybrid ERS12855586 SAMEA110757976 550 Enterobacter cloacae Integrated prophages and phage-plasmids of Enterobacter cloacae CRE strain 171A5 were induced by MMC addition in exponential phages (2h after cultivation start, see Methods). Phages were isolated, the DNA extracted and sequenced by short reads (Illumina). The short reads from the MMC induction experiment and the long reads of the genome sequencing were cmobined in a hybrid assembly using unicycler v0.4.8 (default). ENA-FIRST-PUBLIC 2022-08-30 ENA-LAST-UPDATE 2022-08-30 External Id SAMEA110757976 INSDC center alias Insitut Pasteur INSDC center name insitut pasteur INSDC first public 2022-08-30T16:14:05Z INSDC last update 2022-08-30T16:14:05Z INSDC status public Submitter Id 171A5_hybrid sample name 171A5_hybrid ERS12855587 SAMEA110757977 550 Enterobacter cloacae Integrated prophages and phage-plasmids of Enterobacter cloacae CRE strain 211G7 were induced by MMC addition in exponential phages (2h after cultivation start, see Methods). Phages were isolated, the DNA extracted and sequenced by short reads (Illumina). The short reads from the MMC induction experiment and the long reads of the genome sequencing were cmobined in a hybrid assembly using unicycler v0.4.8 (default). ENA-FIRST-PUBLIC 2022-08-30 ENA-LAST-UPDATE 2022-08-30 External Id SAMEA110757977 INSDC center alias Insitut Pasteur INSDC center name insitut pasteur INSDC first public 2022-08-30T16:14:05Z INSDC last update 2022-08-30T16:14:05Z INSDC status public Submitter Id 211G7_hybrid sample name 211G7_hybrid