ERS14543323 SAMEA112433013 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433013 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:00Z INSDC last update 2023-02-03T00:50:00Z INSDC status public Submitter Id MGBC162887 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 92.88 completeness software CheckM contamination score 1.83 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593853 sample name MGBC162887 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543324 SAMEA112433014 331634 uncultured Rikenellaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433014 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:00Z INSDC last update 2023-02-03T00:50:00Z INSDC status public Submitter Id MGBC162889 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 92.10 completeness software CheckM contamination score 0.09 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593853 sample name MGBC162889 scientific_name uncultured Rikenellaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543325 SAMEA112433015 172733 uncultured Eubacteriales bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433015 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:00Z INSDC last update 2023-02-03T00:50:00Z INSDC status public Submitter Id MGBC162890 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 89.82 completeness software CheckM contamination score 0.22 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593853 sample name MGBC162890 scientific_name uncultured Eubacteriales bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543326 SAMEA112433016 671267 Phocaeicola sartorii ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433016 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:00Z INSDC last update 2023-02-03T00:50:00Z INSDC status public Submitter Id MGBC162891 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 89.79 completeness software CheckM contamination score 1.24 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593853 sample name MGBC162891 scientific_name Phocaeicola sartorii sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543327 SAMEA112433017 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433017 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:00Z INSDC last update 2023-02-03T00:50:00Z INSDC status public Submitter Id MGBC162892 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 86.19 completeness software CheckM contamination score 0.19 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593853 sample name MGBC162892 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543328 SAMEA112433018 2054177 Christensenellaceae bacterium assembly software metaSPAdes_v3.10.1 broad-scale environmental context mouse gut collection date not provided sample derived from SRR10593853 geographic location (longitude) not provided DD binning parameters default parameters, kmer: 4 contamination score 1.84 % ENA-FIRST-PUBLIC 2023-02-03T00:50:00Z ENA-LAST-UPDATE 2023-02-03T00:50:00Z completeness software CheckM geographic location (country and/or sea) USA binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) organism Candidatus Borkfalkiaceae bacterium assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics taxonomic identity marker multi-marker approach completeness score 79.95 % environmental medium Faeces geographic location (latitude) not provided DD scientific_name Candidatus Borkfalkiaceae bacterium common name investigation type metagenome-assembled genome local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sequencing method Illumina isolation_source Faeces ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 ERS14543329 SAMEA112433019 172733 uncultured Eubacteriales bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433019 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:00Z INSDC last update 2023-02-03T00:50:00Z INSDC status public Submitter Id MGBC162894 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 78.92 completeness software CheckM contamination score 0.67 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593853 sample name MGBC162894 scientific_name uncultured Eubacteriales bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543330 SAMEA112433020 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433020 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:00Z INSDC last update 2023-02-03T00:50:00Z INSDC status public Submitter Id MGBC162895 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 78.58 completeness software CheckM contamination score 0.00 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593853 sample name MGBC162895 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543331 SAMEA112433021 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433021 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:08Z INSDC last update 2023-02-03T00:50:08Z INSDC status public Submitter Id MGBC162896 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 74.16 completeness software CheckM contamination score 1.51 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593853 sample name MGBC162896 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543332 SAMEA112433022 91750 uncultured Alphaproteobacteria bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433022 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:08Z INSDC last update 2023-02-03T00:50:08Z INSDC status public Submitter Id MGBC162897 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 73.17 completeness software CheckM contamination score 0.18 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593853 sample name MGBC162897 scientific_name uncultured Alphaproteobacteria bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543333 SAMEA112433023 286138 uncultured Dorea sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433023 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:08Z INSDC last update 2023-02-03T00:50:08Z INSDC status public Submitter Id MGBC162898 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 72.65 completeness software CheckM contamination score 4.19 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593853 sample name MGBC162898 scientific_name uncultured Dorea sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543334 SAMEA112433024 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433024 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:08Z INSDC last update 2023-02-03T00:50:08Z INSDC status public Submitter Id MGBC162899 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 70.75 completeness software CheckM contamination score 0.00 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593853 sample name MGBC162899 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543335 SAMEA112433025 2054177 Christensenellaceae bacterium assembly software metaSPAdes_v3.10.1 broad-scale environmental context mouse gut collection date not provided sample derived from SRR10593853 geographic location (longitude) not provided DD binning parameters default parameters, kmer: 4 contamination score 0.40 % ENA-FIRST-PUBLIC 2023-02-03T00:50:08Z ENA-LAST-UPDATE 2023-02-03T00:50:08Z completeness software CheckM geographic location (country and/or sea) USA binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) organism Candidatus Borkfalkiaceae bacterium assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics taxonomic identity marker multi-marker approach completeness score 68.50 % environmental medium Faeces geographic location (latitude) not provided DD scientific_name Candidatus Borkfalkiaceae bacterium common name investigation type metagenome-assembled genome local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sequencing method Illumina isolation_source Faeces ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 ERS14543336 SAMEA112433026 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03T00:50:08Z ENA-LAST-UPDATE 2023-02-03T00:50:08Z External Id SAMEA112433026 INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:08Z INSDC last update 2023-02-03T00:50:08Z INSDC status public Submitter Id MGBC162901 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 68.44 completeness software CheckM contamination score 3.45 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593853 sample name MGBC162901 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543337 SAMEA112433027 219660 uncultured Rickettsiales bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433027 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:08Z INSDC last update 2023-02-03T00:50:08Z INSDC status public Submitter Id MGBC162902 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 67.77 completeness software CheckM contamination score 2.13 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593853 sample name MGBC162902 scientific_name uncultured Rickettsiales bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543338 SAMEA112433028 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433028 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:08Z INSDC last update 2023-02-03T00:50:08Z INSDC status public Submitter Id MGBC162903 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 67.24 completeness software CheckM contamination score 0.00 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593853 sample name MGBC162903 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543339 SAMEA112433029 2039243 uncultured Anaerotignum sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433029 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:16Z INSDC last update 2023-02-03T00:50:16Z INSDC status public Submitter Id MGBC162904 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 65.21 completeness software CheckM contamination score 2.18 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593853 sample name MGBC162904 scientific_name uncultured Anaerotignum sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543340 SAMEA112433030 219660 uncultured Rickettsiales bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433030 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:16Z INSDC last update 2023-02-03T00:50:16Z INSDC status public Submitter Id MGBC162905 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 64.97 completeness software CheckM contamination score 2.13 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593853 sample name MGBC162905 scientific_name uncultured Rickettsiales bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543341 SAMEA112433031 162156 uncultured Bacteroides sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433031 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:16Z INSDC last update 2023-02-03T00:50:16Z INSDC status public Submitter Id MGBC162906 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 64.48 completeness software CheckM contamination score 1.72 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593853 sample name MGBC162906 scientific_name uncultured Bacteroides sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543342 SAMEA112433032 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433032 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:16Z INSDC last update 2023-02-03T00:50:16Z INSDC status public Submitter Id MGBC162907 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 58.90 completeness software CheckM contamination score 0.00 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593853 sample name MGBC162907 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543343 SAMEA112433033 344338 uncultured Bacillota bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433033 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:16Z INSDC last update 2023-02-03T00:50:16Z INSDC status public Submitter Id MGBC162908 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 58.83 completeness software CheckM contamination score 0.13 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593853 sample name MGBC162908 scientific_name uncultured Firmicutes bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543344 SAMEA112433034 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433034 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:16Z INSDC last update 2023-02-03T00:50:16Z INSDC status public Submitter Id MGBC162909 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 54.31 completeness software CheckM contamination score 0.00 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593853 sample name MGBC162909 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543345 SAMEA112433035 331634 uncultured Rikenellaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433035 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:16Z INSDC last update 2023-02-03T00:50:16Z INSDC status public Submitter Id MGBC162910 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 100 completeness software CheckM contamination score 0.74 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593849 sample name MGBC162910 scientific_name uncultured Rikenellaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543346 SAMEA112433036 876416 uncultured Odoribacter sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433036 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:16Z INSDC last update 2023-02-03T00:50:16Z INSDC status public Submitter Id MGBC162911 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 100 completeness software CheckM contamination score 0.54 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593849 sample name MGBC162911 scientific_name uncultured Odoribacter sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543347 SAMEA112433037 368003 uncultured Rikenella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433037 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:23Z INSDC last update 2023-02-03T00:50:23Z INSDC status public Submitter Id MGBC162912 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.52 completeness software CheckM contamination score 0.48 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593849 sample name MGBC162912 scientific_name uncultured Rikenella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543348 SAMEA112433038 876416 uncultured Odoribacter sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433038 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:23Z INSDC last update 2023-02-03T00:50:23Z INSDC status public Submitter Id MGBC162913 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.46 completeness software CheckM contamination score 0.00 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593849 sample name MGBC162913 scientific_name uncultured Odoribacter sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543349 SAMEA112433039 1918613 uncultured Muribaculum sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433039 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:23Z INSDC last update 2023-02-03T00:50:23Z INSDC status public Submitter Id MGBC162914 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.43 completeness software CheckM contamination score 1.13 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593849 sample name MGBC162914 scientific_name uncultured Muribaculum sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543350 SAMEA112433040 76936 Helicobacter typhlonius ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433040 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:23Z INSDC last update 2023-02-03T00:50:23Z INSDC status public Submitter Id MGBC162915 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.35 completeness software CheckM contamination score 0.71 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593849 sample name MGBC162915 scientific_name Helicobacter typhlonius sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543351 SAMEA112433041 135569 Helicobacter apodemus ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433041 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:23Z INSDC last update 2023-02-03T00:50:23Z INSDC status public Submitter Id MGBC162916 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.25 completeness software CheckM contamination score 0.35 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593849 sample name MGBC162916 scientific_name Helicobacter apodemus sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543352 SAMEA112433042 876091 uncultured Oscillibacter sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433042 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:23Z INSDC last update 2023-02-03T00:50:23Z INSDC status public Submitter Id MGBC162918 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.46 completeness software CheckM contamination score 0.34 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593849 sample name MGBC162918 scientific_name uncultured Oscillibacter sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543353 SAMEA112433043 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433043 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:23Z INSDC last update 2023-02-03T00:50:23Z INSDC status public Submitter Id MGBC162919 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.30 completeness software CheckM contamination score 0.25 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593849 sample name MGBC162919 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543354 SAMEA112433044 1981031 uncultured Mailhella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433044 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:23Z INSDC last update 2023-02-03T00:50:23Z INSDC status public Submitter Id MGBC162920 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.22 completeness software CheckM contamination score 0.00 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593849 sample name MGBC162920 scientific_name uncultured Mailhella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543355 SAMEA112433045 1702221 Faecalibaculum rodentium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433045 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:31Z INSDC last update 2023-02-03T00:50:31Z INSDC status public Submitter Id MGBC162922 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.11 completeness software CheckM contamination score 2.29 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593849 sample name MGBC162922 scientific_name Faecalibaculum rodentium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543356 SAMEA112433046 1862668 Ileibacterium valens ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433046 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:31Z INSDC last update 2023-02-03T00:50:31Z INSDC status public Submitter Id MGBC162923 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.84 completeness software CheckM contamination score 1.48 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593849 sample name MGBC162923 scientific_name Ileibacterium valens sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543357 SAMEA112433047 194843 uncultured Bacteroidales bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433047 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:31Z INSDC last update 2023-02-03T00:50:31Z INSDC status public Submitter Id MGBC162924 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.48 completeness software CheckM contamination score 0.24 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593849 sample name MGBC162924 scientific_name uncultured Bacteroidales bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543358 SAMEA112433048 1399876 uncultured Mucispirillum sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433048 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:31Z INSDC last update 2023-02-03T00:50:31Z INSDC status public Submitter Id MGBC162925 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.41 completeness software CheckM contamination score 3.45 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593849 sample name MGBC162925 scientific_name uncultured Mucispirillum sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543359 SAMEA112433049 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433049 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:31Z INSDC last update 2023-02-03T00:50:31Z INSDC status public Submitter Id MGBC162926 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.35 completeness software CheckM contamination score 0.12 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593849 sample name MGBC162926 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543360 SAMEA112433050 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433050 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:31Z INSDC last update 2023-02-03T00:50:31Z INSDC status public Submitter Id MGBC162927 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.29 completeness software CheckM contamination score 0.57 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593849 sample name MGBC162927 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543361 SAMEA112433051 538949 uncultured Alistipes sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433051 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:31Z INSDC last update 2023-02-03T00:50:31Z INSDC status public Submitter Id MGBC162928 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.21 completeness software CheckM contamination score 1.22 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593849 sample name MGBC162928 scientific_name uncultured Alistipes sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543362 SAMEA112433052 876416 uncultured Odoribacter sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433052 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:31Z INSDC last update 2023-02-03T00:50:31Z INSDC status public Submitter Id MGBC162929 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.04 completeness software CheckM contamination score 1.61 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593849 sample name MGBC162929 scientific_name uncultured Odoribacter sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543363 SAMEA112433053 538949 uncultured Alistipes sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433053 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:38Z INSDC last update 2023-02-03T00:50:38Z INSDC status public Submitter Id MGBC162930 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.95 completeness software CheckM contamination score 0.00 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593849 sample name MGBC162930 scientific_name uncultured Alistipes sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543364 SAMEA112433054 2094151 Paramuribaculum intestinale ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433054 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:38Z INSDC last update 2023-02-03T00:50:38Z INSDC status public Submitter Id MGBC162931 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.82 completeness software CheckM contamination score 0.63 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593849 sample name MGBC162931 scientific_name Paramuribaculum intestinale sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543365 SAMEA112433055 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433055 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:38Z INSDC last update 2023-02-03T00:50:38Z INSDC status public Submitter Id MGBC162932 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.60 completeness software CheckM contamination score 0.38 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593849 sample name MGBC162932 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543366 SAMEA112433056 172733 uncultured Eubacteriales bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433056 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:38Z INSDC last update 2023-02-03T00:50:38Z INSDC status public Submitter Id MGBC162933 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 95.77 completeness software CheckM contamination score 0.00 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593849 sample name MGBC162933 scientific_name uncultured Eubacteriales bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543367 SAMEA112433057 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433057 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:38Z INSDC last update 2023-02-03T00:50:38Z INSDC status public Submitter Id MGBC162934 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 95.68 completeness software CheckM contamination score 0.00 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593849 sample name MGBC162934 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543368 SAMEA112433058 167968 uncultured Desulfovibrio sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433058 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:38Z INSDC last update 2023-02-03T00:50:38Z INSDC status public Submitter Id MGBC162935 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 95.66 completeness software CheckM contamination score 0.59 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593849 sample name MGBC162935 scientific_name uncultured Desulfovibrio sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543369 SAMEA112433059 167968 uncultured Desulfovibrio sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433059 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:38Z INSDC last update 2023-02-03T00:50:38Z INSDC status public Submitter Id MGBC162936 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 95.56 completeness software CheckM contamination score 1.40 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593849 sample name MGBC162936 scientific_name uncultured Desulfovibrio sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543370 SAMEA112433060 172733 uncultured Eubacteriales bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433060 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:38Z INSDC last update 2023-02-03T00:50:38Z INSDC status public Submitter Id MGBC162937 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 94.99 completeness software CheckM contamination score 0.70 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593849 sample name MGBC162937 scientific_name uncultured Eubacteriales bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543371 SAMEA112433061 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433061 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:43Z INSDC last update 2023-02-03T00:50:43Z INSDC status public Submitter Id MGBC162938 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 94.81 completeness software CheckM contamination score 0.96 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593849 sample name MGBC162938 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543372 SAMEA112433062 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03T00:50:43Z ENA-LAST-UPDATE 2023-02-03T00:50:43Z External Id SAMEA112433062 INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:43Z INSDC last update 2023-02-03T00:50:43Z INSDC status public Submitter Id MGBC162939 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 94.47 completeness software CheckM contamination score 1.50 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593849 sample name MGBC162939 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543373 SAMEA112433063 194843 uncultured Bacteroidales bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433063 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:43Z INSDC last update 2023-02-03T00:50:43Z INSDC status public Submitter Id MGBC162940 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 94.04 completeness software CheckM contamination score 0.00 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593849 sample name MGBC162940 scientific_name uncultured Bacteroidales bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543374 SAMEA112433064 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433064 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:43Z INSDC last update 2023-02-03T00:50:43Z INSDC status public Submitter Id MGBC162941 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 93.96 completeness software CheckM contamination score 0.75 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593849 sample name MGBC162941 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543375 SAMEA112433065 1862672 Dubosiella newyorkensis ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433065 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:44Z INSDC last update 2023-02-03T00:50:44Z INSDC status public Submitter Id MGBC162942 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 93.39 completeness software CheckM contamination score 2.29 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593849 sample name MGBC162942 scientific_name Dubosiella newyorkensis sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543376 SAMEA112433066 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433066 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:44Z INSDC last update 2023-02-03T00:50:44Z INSDC status public Submitter Id MGBC162944 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 91.26 completeness software CheckM contamination score 1.19 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593849 sample name MGBC162944 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543377 SAMEA112433067 2478530 Brachyspiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433067 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:44Z INSDC last update 2023-02-03T00:50:44Z INSDC status public Submitter Id MGBC162945 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 90.57 completeness software CheckM contamination score 0.27 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593849 sample name MGBC162945 scientific_name Brachyspiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543378 SAMEA112433068 2676055 uncultured Schaedlerella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433068 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:44Z INSDC last update 2023-02-03T00:50:44Z INSDC status public Submitter Id MGBC162946 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 86.45 completeness software CheckM contamination score 3.22 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593849 sample name MGBC162946 scientific_name uncultured Schaedlerella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543379 SAMEA112433069 2321400 uncultured Atopobiaceae bacterium ENA-FIRST-PUBLIC 2023-02-03T00:48:57Z ENA-LAST-UPDATE 2023-02-03T00:48:57Z External Id SAMEA112433069 INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:48:57Z INSDC last update 2023-02-03T00:48:57Z INSDC status public Submitter Id MGBC162947 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 85.80 completeness software CheckM contamination score 0.54 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593849 sample name MGBC162947 scientific_name uncultured Atopobiaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543380 SAMEA112433070 224209 uncultured Bacilli bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433070 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:48:57Z INSDC last update 2023-02-03T00:48:57Z INSDC status public Submitter Id MGBC162948 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 84.80 completeness software CheckM contamination score 0.32 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593849 sample name MGBC162948 scientific_name uncultured Bacilli bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543381 SAMEA112433071 1263098 uncultured Parasutterella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433071 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:48:57Z INSDC last update 2023-02-03T00:48:57Z INSDC status public Submitter Id MGBC162949 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 84.62 completeness software CheckM contamination score 2.37 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593849 sample name MGBC162949 scientific_name uncultured Parasutterella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543382 SAMEA112433072 2054177 Christensenellaceae bacterium assembly software metaSPAdes_v3.10.1 broad-scale environmental context mouse gut collection date not provided sample derived from SRR10593849 geographic location (longitude) not provided DD binning parameters default parameters, kmer: 4 contamination score 1.01 % ENA-FIRST-PUBLIC 2023-02-03T00:48:57Z ENA-LAST-UPDATE 2023-02-03T00:48:57Z completeness software CheckM geographic location (country and/or sea) USA binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) organism Candidatus Borkfalkiaceae bacterium assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics taxonomic identity marker multi-marker approach completeness score 83.93 % environmental medium Faeces geographic location (latitude) not provided DD scientific_name Candidatus Borkfalkiaceae bacterium common name investigation type metagenome-assembled genome local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sequencing method Illumina isolation_source Faeces ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 ERS14543383 SAMEA112433073 2039243 uncultured Anaerotignum sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433073 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:48:57Z INSDC last update 2023-02-03T00:48:57Z INSDC status public Submitter Id MGBC162951 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 83.55 completeness software CheckM contamination score 1.29 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593849 sample name MGBC162951 scientific_name uncultured Anaerotignum sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543384 SAMEA112433074 707003 uncultured Oscillospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433074 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:48:57Z INSDC last update 2023-02-03T00:48:57Z INSDC status public Submitter Id MGBC162952 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 82.28 completeness software CheckM contamination score 2.01 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593849 sample name MGBC162952 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543385 SAMEA112433075 538949 uncultured Alistipes sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433075 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:48:57Z INSDC last update 2023-02-03T00:48:57Z INSDC status public Submitter Id MGBC162953 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 80.29 completeness software CheckM contamination score 2.50 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593849 sample name MGBC162953 scientific_name uncultured Alistipes sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543386 SAMEA112433076 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433076 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:48:57Z INSDC last update 2023-02-03T00:48:57Z INSDC status public Submitter Id MGBC162954 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 80.18 completeness software CheckM contamination score 0.00 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593849 sample name MGBC162954 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543387 SAMEA112433077 1806076 uncultured Parvibacter sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433077 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:04Z INSDC last update 2023-02-03T00:49:04Z INSDC status public Submitter Id MGBC162955 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 78.78 completeness software CheckM contamination score 1.73 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593849 sample name MGBC162955 scientific_name uncultured Parvibacter sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543388 SAMEA112433078 1193534 uncultured Flavonifractor sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433078 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:04Z INSDC last update 2023-02-03T00:49:04Z INSDC status public Submitter Id MGBC162956 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 77.32 completeness software CheckM contamination score 0.94 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593849 sample name MGBC162956 scientific_name uncultured Flavonifractor sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543389 SAMEA112433079 172733 uncultured Eubacteriales bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433079 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:04Z INSDC last update 2023-02-03T00:49:04Z INSDC status public Submitter Id MGBC162957 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 74.97 completeness software CheckM contamination score 0.00 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593849 sample name MGBC162957 scientific_name uncultured Eubacteriales bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543390 SAMEA112433080 707003 uncultured Oscillospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433080 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:04Z INSDC last update 2023-02-03T00:49:04Z INSDC status public Submitter Id MGBC162958 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 68.01 completeness software CheckM contamination score 0.43 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593849 sample name MGBC162958 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543391 SAMEA112433081 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433081 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:04Z INSDC last update 2023-02-03T00:49:04Z INSDC status public Submitter Id MGBC162959 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 67.82 completeness software CheckM contamination score 3.23 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593849 sample name MGBC162959 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543392 SAMEA112433082 707003 uncultured Oscillospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433082 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:04Z INSDC last update 2023-02-03T00:49:04Z INSDC status public Submitter Id MGBC162960 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 66.72 completeness software CheckM contamination score 0.67 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593849 sample name MGBC162960 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543393 SAMEA112433083 823 Parabacteroides distasonis ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433083 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:04Z INSDC last update 2023-02-03T00:49:04Z INSDC status public Submitter Id MGBC162961 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 65.07 completeness software CheckM contamination score 1.79 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593849 sample name MGBC162961 scientific_name Parabacteroides distasonis sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543394 SAMEA112433084 905011 uncultured Anaerotruncus sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433084 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:04Z INSDC last update 2023-02-03T00:49:04Z INSDC status public Submitter Id MGBC162962 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 64.49 completeness software CheckM contamination score 0.92 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593849 sample name MGBC162962 scientific_name uncultured Anaerotruncus sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543395 SAMEA112433085 179883 uncultured Candidatus Saccharibacteria bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433085 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:11Z INSDC last update 2023-02-03T00:49:11Z INSDC status public Submitter Id MGBC162963 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 61.60 completeness software CheckM contamination score 0.85 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593849 sample name MGBC162963 scientific_name uncultured Candidatus Saccharibacteria bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543396 SAMEA112433086 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433086 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:11Z INSDC last update 2023-02-03T00:49:11Z INSDC status public Submitter Id MGBC162964 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 59.62 completeness software CheckM contamination score 0.00 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593849 sample name MGBC162964 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543397 SAMEA112433087 1926676 uncultured Prevotellamassilia sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433087 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:11Z INSDC last update 2023-02-03T00:49:11Z INSDC status public Submitter Id MGBC162965 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 51.66 completeness software CheckM contamination score 0.00 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593849 sample name MGBC162965 scientific_name uncultured Prevotellamassilia sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543398 SAMEA112433088 368003 uncultured Rikenella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433088 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:11Z INSDC last update 2023-02-03T00:49:11Z INSDC status public Submitter Id MGBC162967 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.52 completeness software CheckM contamination score 0.48 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593864 sample name MGBC162967 scientific_name uncultured Rikenella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543399 SAMEA112433089 1918613 uncultured Muribaculum sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433089 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:11Z INSDC last update 2023-02-03T00:49:11Z INSDC status public Submitter Id MGBC162968 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.43 completeness software CheckM contamination score 0.38 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593864 sample name MGBC162968 scientific_name uncultured Muribaculum sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543400 SAMEA112433090 76936 Helicobacter typhlonius ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433090 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:11Z INSDC last update 2023-02-03T00:49:11Z INSDC status public Submitter Id MGBC162969 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.35 completeness software CheckM contamination score 0.71 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593864 sample name MGBC162969 scientific_name Helicobacter typhlonius sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543401 SAMEA112433091 135569 Helicobacter apodemus ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433091 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:11Z INSDC last update 2023-02-03T00:49:11Z INSDC status public Submitter Id MGBC162970 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.25 completeness software CheckM contamination score 0.35 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593864 sample name MGBC162970 scientific_name Helicobacter apodemus sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543402 SAMEA112433092 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433092 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:11Z INSDC last update 2023-02-03T00:49:11Z INSDC status public Submitter Id MGBC162971 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.05 completeness software CheckM contamination score 0.25 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593864 sample name MGBC162971 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543403 SAMEA112433093 538949 uncultured Alistipes sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433093 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:18Z INSDC last update 2023-02-03T00:49:18Z INSDC status public Submitter Id MGBC162972 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.95 completeness software CheckM contamination score 1.06 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593864 sample name MGBC162972 scientific_name uncultured Alistipes sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543404 SAMEA112433094 876416 uncultured Odoribacter sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433094 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:18Z INSDC last update 2023-02-03T00:49:18Z INSDC status public Submitter Id MGBC162973 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.92 completeness software CheckM contamination score 0.00 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593864 sample name MGBC162973 scientific_name uncultured Odoribacter sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543405 SAMEA112433095 1263098 uncultured Parasutterella sp. ENA-FIRST-PUBLIC 2023-02-03T00:49:18Z ENA-LAST-UPDATE 2023-02-03T00:49:18Z External Id SAMEA112433095 INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:18Z INSDC last update 2023-02-03T00:49:18Z INSDC status public Submitter Id MGBC162974 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.75 completeness software CheckM contamination score 0.62 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593864 sample name MGBC162974 scientific_name uncultured Parasutterella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543406 SAMEA112433096 823 Parabacteroides distasonis ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433096 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:18Z INSDC last update 2023-02-03T00:49:18Z INSDC status public Submitter Id MGBC162975 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.65 completeness software CheckM contamination score 0.48 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593864 sample name MGBC162975 scientific_name Parabacteroides distasonis sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543407 SAMEA112433097 538949 uncultured Alistipes sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433097 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:18Z INSDC last update 2023-02-03T00:49:18Z INSDC status public Submitter Id MGBC162976 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.55 completeness software CheckM contamination score 0.48 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593864 sample name MGBC162976 scientific_name uncultured Alistipes sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543408 SAMEA112433098 248039 Mucispirillum schaedleri ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433098 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:18Z INSDC last update 2023-02-03T00:49:18Z INSDC status public Submitter Id MGBC162977 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.27 completeness software CheckM contamination score 2.59 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593864 sample name MGBC162977 scientific_name Mucispirillum schaedleri sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543409 SAMEA112433099 1981031 uncultured Mailhella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433099 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:18Z INSDC last update 2023-02-03T00:49:18Z INSDC status public Submitter Id MGBC162978 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.22 completeness software CheckM contamination score 0.00 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593864 sample name MGBC162978 scientific_name uncultured Mailhella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543410 SAMEA112433100 1702221 Faecalibaculum rodentium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433100 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:18Z INSDC last update 2023-02-03T00:49:18Z INSDC status public Submitter Id MGBC162979 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.11 completeness software CheckM contamination score 2.29 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593864 sample name MGBC162979 scientific_name Faecalibaculum rodentium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543411 SAMEA112433101 1862668 Ileibacterium valens ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433101 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:25Z INSDC last update 2023-02-03T00:49:25Z INSDC status public Submitter Id MGBC162981 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.84 completeness software CheckM contamination score 1.48 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593864 sample name MGBC162981 scientific_name Ileibacterium valens sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543412 SAMEA112433102 162156 uncultured Bacteroides sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433102 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:25Z INSDC last update 2023-02-03T00:49:25Z INSDC status public Submitter Id MGBC162982 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.76 completeness software CheckM contamination score 0.00 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593864 sample name MGBC162982 scientific_name uncultured Bacteroides sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543413 SAMEA112433103 172733 uncultured Eubacteriales bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433103 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:25Z INSDC last update 2023-02-03T00:49:25Z INSDC status public Submitter Id MGBC162983 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.17 completeness software CheckM contamination score 0.00 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593864 sample name MGBC162983 scientific_name uncultured Eubacteriales bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543414 SAMEA112433104 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433104 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:25Z INSDC last update 2023-02-03T00:49:25Z INSDC status public Submitter Id MGBC162984 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.09 completeness software CheckM contamination score 0.38 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593864 sample name MGBC162984 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543415 SAMEA112433105 1806076 uncultured Parvibacter sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433105 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:25Z INSDC last update 2023-02-03T00:49:25Z INSDC status public Submitter Id MGBC162985 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.06 completeness software CheckM contamination score 0.48 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593864 sample name MGBC162985 scientific_name uncultured Parvibacter sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543416 SAMEA112433106 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433106 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:25Z INSDC last update 2023-02-03T00:49:25Z INSDC status public Submitter Id MGBC162986 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.79 completeness software CheckM contamination score 0.38 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593864 sample name MGBC162986 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543417 SAMEA112433107 194843 uncultured Bacteroidales bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433107 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:25Z INSDC last update 2023-02-03T00:49:25Z INSDC status public Submitter Id MGBC162987 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.42 completeness software CheckM contamination score 0.48 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593864 sample name MGBC162987 scientific_name uncultured Bacteroidales bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543418 SAMEA112433108 172733 uncultured Eubacteriales bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433108 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:25Z INSDC last update 2023-02-03T00:49:25Z INSDC status public Submitter Id MGBC162988 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.37 completeness software CheckM contamination score 0.00 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593864 sample name MGBC162988 scientific_name uncultured Eubacteriales bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543419 SAMEA112433109 167968 uncultured Desulfovibrio sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433109 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:32Z INSDC last update 2023-02-03T00:49:32Z INSDC status public Submitter Id MGBC162989 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.25 completeness software CheckM contamination score 0.00 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593864 sample name MGBC162989 scientific_name uncultured Desulfovibrio sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543420 SAMEA112433110 2478530 Brachyspiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433110 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:32Z INSDC last update 2023-02-03T00:49:32Z INSDC status public Submitter Id MGBC162990 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.13 completeness software CheckM contamination score 0.27 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593864 sample name MGBC162990 scientific_name Brachyspiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543421 SAMEA112433111 85831 Bacteroides acidifaciens ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433111 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:32Z INSDC last update 2023-02-03T00:49:32Z INSDC status public Submitter Id MGBC162991 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 95.91 completeness software CheckM contamination score 0.65 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593864 sample name MGBC162991 scientific_name Bacteroides acidifaciens sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543422 SAMEA112433112 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433112 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:32Z INSDC last update 2023-02-03T00:49:32Z INSDC status public Submitter Id MGBC162992 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 95.84 completeness software CheckM contamination score 0.12 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593864 sample name MGBC162992 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543423 SAMEA112433113 1926676 uncultured Prevotellamassilia sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433113 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:33Z INSDC last update 2023-02-03T00:49:33Z INSDC status public Submitter Id MGBC162993 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 95.22 completeness software CheckM contamination score 1.24 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593864 sample name MGBC162993 scientific_name uncultured Prevotellamassilia sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543424 SAMEA112433114 876416 uncultured Odoribacter sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433114 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:33Z INSDC last update 2023-02-03T00:49:33Z INSDC status public Submitter Id MGBC162994 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 94.91 completeness software CheckM contamination score 1.08 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593864 sample name MGBC162994 scientific_name uncultured Odoribacter sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543425 SAMEA112433115 2054177 Christensenellaceae bacterium assembly software metaSPAdes_v3.10.1 broad-scale environmental context mouse gut collection date not provided sample derived from SRR10593864 geographic location (longitude) not provided DD binning parameters default parameters, kmer: 4 contamination score 0.83 % ENA-FIRST-PUBLIC 2023-02-03T00:49:33Z ENA-LAST-UPDATE 2023-02-03T00:49:33Z completeness software CheckM geographic location (country and/or sea) USA binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) organism Candidatus Borkfalkiaceae bacterium assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics taxonomic identity marker multi-marker approach completeness score 94.48 % environmental medium Faeces geographic location (latitude) not provided DD scientific_name Candidatus Borkfalkiaceae bacterium common name investigation type metagenome-assembled genome local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sequencing method Illumina isolation_source Faeces ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 ERS14543426 SAMEA112433116 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433116 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:33Z INSDC last update 2023-02-03T00:49:33Z INSDC status public Submitter Id MGBC162996 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 94.41 completeness software CheckM contamination score 1.51 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593864 sample name MGBC162996 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543427 SAMEA112433117 2054177 Christensenellaceae bacterium assembly software metaSPAdes_v3.10.1 broad-scale environmental context mouse gut collection date not provided sample derived from SRR10593864 geographic location (longitude) not provided DD binning parameters default parameters, kmer: 4 contamination score 0.00 % ENA-FIRST-PUBLIC 2023-02-03T00:49:39Z ENA-LAST-UPDATE 2023-02-03T00:49:39Z completeness software CheckM geographic location (country and/or sea) USA binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) organism Candidatus Borkfalkiaceae bacterium assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics taxonomic identity marker multi-marker approach completeness score 93.26 % environmental medium Faeces geographic location (latitude) not provided DD scientific_name Candidatus Borkfalkiaceae bacterium common name investigation type metagenome-assembled genome local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sequencing method Illumina isolation_source Faeces ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 ERS14543428 SAMEA112433118 224209 uncultured Bacilli bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433118 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:39Z INSDC last update 2023-02-03T00:49:39Z INSDC status public Submitter Id MGBC162998 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 91.57 completeness software CheckM contamination score 1.50 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593864 sample name MGBC162998 scientific_name uncultured Bacilli bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543429 SAMEA112433119 91750 uncultured Alphaproteobacteria bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433119 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:39Z INSDC last update 2023-02-03T00:49:39Z INSDC status public Submitter Id MGBC162999 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 90.51 completeness software CheckM contamination score 0.00 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593864 sample name MGBC162999 scientific_name uncultured Alphaproteobacteria bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543430 SAMEA112433120 2054177 Christensenellaceae bacterium assembly software metaSPAdes_v3.10.1 broad-scale environmental context mouse gut collection date not provided sample derived from SRR10593864 geographic location (longitude) not provided DD binning parameters default parameters, kmer: 4 contamination score 3.70 % ENA-FIRST-PUBLIC 2023-02-03T00:49:40Z ENA-LAST-UPDATE 2023-02-03T00:49:40Z completeness software CheckM geographic location (country and/or sea) USA binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) organism Candidatus Borkfalkiaceae bacterium assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics taxonomic identity marker multi-marker approach completeness score 87.58 % environmental medium Faeces geographic location (latitude) not provided DD scientific_name Candidatus Borkfalkiaceae bacterium common name investigation type metagenome-assembled genome local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sequencing method Illumina isolation_source Faeces ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 ERS14543431 SAMEA112433121 1862672 Dubosiella newyorkensis ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433121 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:40Z INSDC last update 2023-02-03T00:49:40Z INSDC status public Submitter Id MGBC163001 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 86.83 completeness software CheckM contamination score 1.68 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593864 sample name MGBC163001 scientific_name Dubosiella newyorkensis sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543432 SAMEA112433122 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433122 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:40Z INSDC last update 2023-02-03T00:49:40Z INSDC status public Submitter Id MGBC163002 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 86.60 completeness software CheckM contamination score 3.77 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593864 sample name MGBC163002 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543433 SAMEA112433123 244328 uncultured Clostridia bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433123 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:40Z INSDC last update 2023-02-03T00:49:40Z INSDC status public Submitter Id MGBC163003 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 79.01 completeness software CheckM contamination score 1.79 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593864 sample name MGBC163003 scientific_name uncultured Clostridia bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543434 SAMEA112433124 331634 uncultured Rikenellaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433124 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:40Z INSDC last update 2023-02-03T00:49:40Z INSDC status public Submitter Id MGBC163004 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 78.20 completeness software CheckM contamination score 0.90 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593864 sample name MGBC163004 scientific_name uncultured Rikenellaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543435 SAMEA112433125 244328 uncultured Clostridia bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433125 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:46Z INSDC last update 2023-02-03T00:49:46Z INSDC status public Submitter Id MGBC163005 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 76.55 completeness software CheckM contamination score 3.60 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593864 sample name MGBC163005 scientific_name uncultured Clostridia bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543436 SAMEA112433126 172733 uncultured Eubacteriales bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433126 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:46Z INSDC last update 2023-02-03T00:49:46Z INSDC status public Submitter Id MGBC163006 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 74.97 completeness software CheckM contamination score 0.00 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593864 sample name MGBC163006 scientific_name uncultured Eubacteriales bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543437 SAMEA112433127 244328 uncultured Clostridia bacterium ENA-FIRST-PUBLIC 2023-02-03T00:49:46Z ENA-LAST-UPDATE 2023-02-03T00:49:46Z External Id SAMEA112433127 INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:46Z INSDC last update 2023-02-03T00:49:46Z INSDC status public Submitter Id MGBC163007 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 74.87 completeness software CheckM contamination score 1.34 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593864 sample name MGBC163007 scientific_name uncultured Clostridia bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543438 SAMEA112433128 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433128 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:46Z INSDC last update 2023-02-03T00:49:46Z INSDC status public Submitter Id MGBC163008 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 74.71 completeness software CheckM contamination score 0.00 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593864 sample name MGBC163008 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543439 SAMEA112433129 194843 uncultured Bacteroidales bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433129 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:46Z INSDC last update 2023-02-03T00:49:46Z INSDC status public Submitter Id MGBC163009 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 69.66 completeness software CheckM contamination score 1.90 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593864 sample name MGBC163009 scientific_name uncultured Bacteroidales bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543440 SAMEA112433130 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433130 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:46Z INSDC last update 2023-02-03T00:49:46Z INSDC status public Submitter Id MGBC163010 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 66.98 completeness software CheckM contamination score 0.00 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593864 sample name MGBC163010 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543441 SAMEA112433131 1465754 Alistipes timonensis ENA-FIRST-PUBLIC 2023-02-03T00:49:46Z ENA-LAST-UPDATE 2023-02-03T00:49:46Z External Id SAMEA112433131 INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:46Z INSDC last update 2023-02-03T00:49:46Z INSDC status public Submitter Id MGBC163011 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 63.27 completeness software CheckM contamination score 1.72 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593864 sample name MGBC163011 scientific_name Alistipes timonensis sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543442 SAMEA112433132 179883 uncultured Candidatus Saccharibacteria bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433132 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:46Z INSDC last update 2023-02-03T00:49:46Z INSDC status public Submitter Id MGBC163012 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 61.60 completeness software CheckM contamination score 0.85 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593864 sample name MGBC163012 scientific_name uncultured Candidatus Saccharibacteria bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543443 SAMEA112433133 2094151 Paramuribaculum intestinale ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433133 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:53Z INSDC last update 2023-02-03T00:49:53Z INSDC status public Submitter Id MGBC163013 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 59.24 completeness software CheckM contamination score 0.38 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593864 sample name MGBC163013 scientific_name Paramuribaculum intestinale sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543444 SAMEA112433134 538949 uncultured Alistipes sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433134 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:53Z INSDC last update 2023-02-03T00:49:53Z INSDC status public Submitter Id MGBC163014 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 58.49 completeness software CheckM contamination score 0.00 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593864 sample name MGBC163014 scientific_name uncultured Alistipes sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543445 SAMEA112433135 179883 uncultured Candidatus Saccharibacteria bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433135 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:53Z INSDC last update 2023-02-03T00:49:53Z INSDC status public Submitter Id MGBC163015 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 54.58 completeness software CheckM contamination score 0.00 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593864 sample name MGBC163015 scientific_name uncultured Candidatus Saccharibacteria bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543446 SAMEA112433136 2094151 Paramuribaculum intestinale ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433136 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:53Z INSDC last update 2023-02-03T00:49:53Z INSDC status public Submitter Id MGBC163018 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.43 completeness software CheckM contamination score 0.38 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593857 sample name MGBC163018 scientific_name Paramuribaculum intestinale sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543447 SAMEA112433137 512312 uncultured Parabacteroides sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433137 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:53Z INSDC last update 2023-02-03T00:49:53Z INSDC status public Submitter Id MGBC163019 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.92 completeness software CheckM contamination score 0.01 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593857 sample name MGBC163019 scientific_name uncultured Parabacteroides sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543448 SAMEA112433138 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433138 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:53Z INSDC last update 2023-02-03T00:49:53Z INSDC status public Submitter Id MGBC163020 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.67 completeness software CheckM contamination score 0.50 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593857 sample name MGBC163020 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543449 SAMEA112433139 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433139 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:53Z INSDC last update 2023-02-03T00:49:53Z INSDC status public Submitter Id MGBC163021 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.67 completeness software CheckM contamination score 0.38 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593857 sample name MGBC163021 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543450 SAMEA112433140 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433140 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:53Z INSDC last update 2023-02-03T00:49:53Z INSDC status public Submitter Id MGBC163022 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.55 completeness software CheckM contamination score 0.00 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593857 sample name MGBC163022 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543451 SAMEA112433141 1926676 uncultured Prevotellamassilia sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433141 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:00Z INSDC last update 2023-02-03T00:50:00Z INSDC status public Submitter Id MGBC163023 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.38 completeness software CheckM contamination score 0.00 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593857 sample name MGBC163023 scientific_name uncultured Prevotellamassilia sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543452 SAMEA112433142 2321400 uncultured Atopobiaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433142 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:00Z INSDC last update 2023-02-03T00:50:00Z INSDC status public Submitter Id MGBC163024 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.38 completeness software CheckM contamination score 0.34 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593857 sample name MGBC163024 scientific_name uncultured Atopobiaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543453 SAMEA112433143 876416 uncultured Odoribacter sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433143 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:00Z INSDC last update 2023-02-03T00:50:00Z INSDC status public Submitter Id MGBC163025 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.20 completeness software CheckM contamination score 0.54 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593857 sample name MGBC163025 scientific_name uncultured Odoribacter sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543454 SAMEA112433144 1702221 Faecalibaculum rodentium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433144 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:00Z INSDC last update 2023-02-03T00:50:00Z INSDC status public Submitter Id MGBC163026 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.11 completeness software CheckM contamination score 2.29 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593857 sample name MGBC163026 scientific_name Faecalibaculum rodentium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543455 SAMEA112433145 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433145 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:00Z INSDC last update 2023-02-03T00:50:00Z INSDC status public Submitter Id MGBC163027 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.92 completeness software CheckM contamination score 0.00 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593857 sample name MGBC163027 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543456 SAMEA112433146 1862668 Ileibacterium valens ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433146 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:00Z INSDC last update 2023-02-03T00:50:00Z INSDC status public Submitter Id MGBC163028 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.84 completeness software CheckM contamination score 1.48 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593857 sample name MGBC163028 scientific_name Ileibacterium valens sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543457 SAMEA112433147 162156 uncultured Bacteroides sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433147 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:00Z INSDC last update 2023-02-03T00:50:00Z INSDC status public Submitter Id MGBC163029 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.47 completeness software CheckM contamination score 0.00 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593857 sample name MGBC163029 scientific_name uncultured Bacteroides sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543458 SAMEA112433148 1622 Ligilactobacillus murinus ENA-FIRST-PUBLIC 2023-02-03T00:50:00Z ENA-LAST-UPDATE 2023-02-03T00:50:00Z External Id SAMEA112433148 INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:00Z INSDC last update 2023-02-03T00:50:00Z INSDC status public Submitter Id MGBC163030 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.46 completeness software CheckM contamination score 0.65 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593857 sample name MGBC163030 scientific_name Ligilactobacillus murinus sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543459 SAMEA112433149 671267 Phocaeicola sartorii ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433149 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:08Z INSDC last update 2023-02-03T00:50:08Z INSDC status public Submitter Id MGBC163031 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.40 completeness software CheckM contamination score 0.38 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593857 sample name MGBC163031 scientific_name Phocaeicola sartorii sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543460 SAMEA112433150 538949 uncultured Alistipes sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433150 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:08Z INSDC last update 2023-02-03T00:50:08Z INSDC status public Submitter Id MGBC163032 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.35 completeness software CheckM contamination score 0.80 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593857 sample name MGBC163032 scientific_name uncultured Alistipes sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543461 SAMEA112433151 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433151 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:09Z INSDC last update 2023-02-03T00:50:09Z INSDC status public Submitter Id MGBC163033 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.35 completeness software CheckM contamination score 0.00 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593857 sample name MGBC163033 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543462 SAMEA112433152 1862672 Dubosiella newyorkensis ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433152 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:09Z INSDC last update 2023-02-03T00:50:09Z INSDC status public Submitter Id MGBC163034 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.90 completeness software CheckM contamination score 2.29 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593857 sample name MGBC163034 scientific_name Dubosiella newyorkensis sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543463 SAMEA112433153 167968 uncultured Desulfovibrio sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433153 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:09Z INSDC last update 2023-02-03T00:50:09Z INSDC status public Submitter Id MGBC163035 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.44 completeness software CheckM contamination score 0.00 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593857 sample name MGBC163035 scientific_name uncultured Desulfovibrio sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543464 SAMEA112433154 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433154 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:09Z INSDC last update 2023-02-03T00:50:09Z INSDC status public Submitter Id MGBC163036 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.40 completeness software CheckM contamination score 0.38 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593857 sample name MGBC163036 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543465 SAMEA112433155 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433155 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:09Z INSDC last update 2023-02-03T00:50:09Z INSDC status public Submitter Id MGBC163037 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.29 completeness software CheckM contamination score 0.47 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593857 sample name MGBC163037 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543466 SAMEA112433156 194843 uncultured Bacteroidales bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433156 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:09Z INSDC last update 2023-02-03T00:50:09Z INSDC status public Submitter Id MGBC163038 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.19 completeness software CheckM contamination score 0.24 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593857 sample name MGBC163038 scientific_name uncultured Bacteroidales bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543467 SAMEA112433157 2854035 Mycoplasmoidaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433157 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:16Z INSDC last update 2023-02-03T00:50:16Z INSDC status public Submitter Id MGBC163039 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 95.22 completeness software CheckM contamination score 2.88 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593857 sample name MGBC163039 scientific_name Mycoplasmoidaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543468 SAMEA112433158 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433158 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:16Z INSDC last update 2023-02-03T00:50:16Z INSDC status public Submitter Id MGBC163041 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 93.96 completeness software CheckM contamination score 0.00 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593857 sample name MGBC163041 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543469 SAMEA112433159 1981031 uncultured Mailhella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433159 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:16Z INSDC last update 2023-02-03T00:50:16Z INSDC status public Submitter Id MGBC163042 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 93.12 completeness software CheckM contamination score 1.18 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593857 sample name MGBC163042 scientific_name uncultured Mailhella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543470 SAMEA112433160 823 Parabacteroides distasonis ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433160 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:16Z INSDC last update 2023-02-03T00:50:16Z INSDC status public Submitter Id MGBC163043 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 91.13 completeness software CheckM contamination score 0.70 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593857 sample name MGBC163043 scientific_name Parabacteroides distasonis sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543471 SAMEA112433161 876416 uncultured Odoribacter sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433161 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:16Z INSDC last update 2023-02-03T00:50:16Z INSDC status public Submitter Id MGBC163044 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 90.59 completeness software CheckM contamination score 0.54 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593857 sample name MGBC163044 scientific_name uncultured Odoribacter sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543472 SAMEA112433162 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433162 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:16Z INSDC last update 2023-02-03T00:50:16Z INSDC status public Submitter Id MGBC163045 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 82.84 completeness software CheckM contamination score 2.15 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593857 sample name MGBC163045 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543473 SAMEA112433163 167968 uncultured Desulfovibrio sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433163 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:16Z INSDC last update 2023-02-03T00:50:16Z INSDC status public Submitter Id MGBC163046 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 79.76 completeness software CheckM contamination score 0.09 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593857 sample name MGBC163046 scientific_name uncultured Desulfovibrio sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543474 SAMEA112433164 1937011 uncultured Dubosiella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433164 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:16Z INSDC last update 2023-02-03T00:50:16Z INSDC status public Submitter Id MGBC163047 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 75.50 completeness software CheckM contamination score 2.36 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593857 sample name MGBC163047 scientific_name uncultured Dubosiella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543475 SAMEA112433165 1806076 uncultured Parvibacter sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433165 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:23Z INSDC last update 2023-02-03T00:50:23Z INSDC status public Submitter Id MGBC163048 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 75.30 completeness software CheckM contamination score 2.00 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593857 sample name MGBC163048 scientific_name uncultured Parvibacter sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543476 SAMEA112433166 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433166 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:23Z INSDC last update 2023-02-03T00:50:23Z INSDC status public Submitter Id MGBC163049 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 74.76 completeness software CheckM contamination score 2.45 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593857 sample name MGBC163049 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543477 SAMEA112433167 172733 uncultured Eubacteriales bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433167 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:23Z INSDC last update 2023-02-03T00:50:23Z INSDC status public Submitter Id MGBC163050 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 74.35 completeness software CheckM contamination score 0.90 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593857 sample name MGBC163050 scientific_name uncultured Eubacteriales bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543478 SAMEA112433168 244328 uncultured Clostridia bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433168 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:23Z INSDC last update 2023-02-03T00:50:23Z INSDC status public Submitter Id MGBC163051 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 70.29 completeness software CheckM contamination score 2.86 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593857 sample name MGBC163051 scientific_name uncultured Clostridia bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543479 SAMEA112433169 876416 uncultured Odoribacter sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433169 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:23Z INSDC last update 2023-02-03T00:50:23Z INSDC status public Submitter Id MGBC163052 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 69.93 completeness software CheckM contamination score 3.45 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593857 sample name MGBC163052 scientific_name uncultured Odoribacter sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543480 SAMEA112433170 85831 Bacteroides acidifaciens ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433170 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:23Z INSDC last update 2023-02-03T00:50:23Z INSDC status public Submitter Id MGBC163053 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 62.93 completeness software CheckM contamination score 1.58 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593857 sample name MGBC163053 scientific_name Bacteroides acidifaciens sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543481 SAMEA112433171 2321402 uncultured Eggerthellaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433171 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:24Z INSDC last update 2023-02-03T00:50:24Z INSDC status public Submitter Id MGBC163054 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 61.44 completeness software CheckM contamination score 1.73 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593857 sample name MGBC163054 scientific_name uncultured Eggerthellaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543482 SAMEA112433172 179883 uncultured Candidatus Saccharibacteria bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433172 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:24Z INSDC last update 2023-02-03T00:50:24Z INSDC status public Submitter Id MGBC163055 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 60.74 completeness software CheckM contamination score 0.85 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593857 sample name MGBC163055 scientific_name uncultured Candidatus Saccharibacteria bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543483 SAMEA112433173 179883 uncultured Candidatus Saccharibacteria bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433173 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:31Z INSDC last update 2023-02-03T00:50:31Z INSDC status public Submitter Id MGBC163056 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 59.60 completeness software CheckM contamination score 0.85 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593857 sample name MGBC163056 scientific_name uncultured Candidatus Saccharibacteria bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543484 SAMEA112433174 179883 uncultured Candidatus Saccharibacteria bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433174 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:31Z INSDC last update 2023-02-03T00:50:31Z INSDC status public Submitter Id MGBC163057 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 59.40 completeness software CheckM contamination score 0.85 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593857 sample name MGBC163057 scientific_name uncultured Candidatus Saccharibacteria bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543485 SAMEA112433175 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433175 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:31Z INSDC last update 2023-02-03T00:50:31Z INSDC status public Submitter Id MGBC163058 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 56.91 completeness software CheckM contamination score 0.57 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593857 sample name MGBC163058 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543486 SAMEA112433176 179883 uncultured Candidatus Saccharibacteria bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433176 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:31Z INSDC last update 2023-02-03T00:50:31Z INSDC status public Submitter Id MGBC163059 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 56.68 completeness software CheckM contamination score 0.00 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593857 sample name MGBC163059 scientific_name uncultured Candidatus Saccharibacteria bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543487 SAMEA112433177 2321400 uncultured Atopobiaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433177 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:31Z INSDC last update 2023-02-03T00:50:31Z INSDC status public Submitter Id MGBC163060 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 51.89 completeness software CheckM contamination score 0.00 environmental medium Faeces geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source feces local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR10593857 sample name MGBC163060 scientific_name uncultured Atopobiaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543488 SAMEA112433178 487175 Parasutterella excrementihominis ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433178 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:31Z INSDC last update 2023-02-03T00:50:31Z INSDC status public Submitter Id MGBC163061 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 100 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474065 sample name MGBC163061 scientific_name Parasutterella excrementihominis sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543489 SAMEA112433179 1598 Limosilactobacillus reuteri ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433179 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:31Z INSDC last update 2023-02-03T00:50:31Z INSDC status public Submitter Id MGBC163062 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.45 completeness software CheckM contamination score 0.55 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474065 sample name MGBC163062 scientific_name Limosilactobacillus reuteri sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543490 SAMEA112433180 2768039 uncultured Duncaniella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433180 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:31Z INSDC last update 2023-02-03T00:50:31Z INSDC status public Submitter Id MGBC163063 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.43 completeness software CheckM contamination score 0.38 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474065 sample name MGBC163063 scientific_name uncultured Duncaniella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543491 SAMEA112433181 707003 uncultured Oscillospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433181 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:38Z INSDC last update 2023-02-03T00:50:38Z INSDC status public Submitter Id MGBC163064 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.32 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474065 sample name MGBC163064 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543492 SAMEA112433182 2321400 uncultured Atopobiaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433182 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:38Z INSDC last update 2023-02-03T00:50:38Z INSDC status public Submitter Id MGBC163065 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.19 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474065 sample name MGBC163065 scientific_name uncultured Atopobiaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543493 SAMEA112433183 59620 uncultured Clostridium sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433183 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:38Z INSDC last update 2023-02-03T00:50:38Z INSDC status public Submitter Id MGBC163066 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.19 completeness software CheckM contamination score 0.20 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474065 sample name MGBC163066 scientific_name uncultured Clostridium sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543494 SAMEA112433184 2321402 uncultured Eggerthellaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433184 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:38Z INSDC last update 2023-02-03T00:50:38Z INSDC status public Submitter Id MGBC163067 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.19 completeness software CheckM contamination score 0.40 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474065 sample name MGBC163067 scientific_name uncultured Eggerthellaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543495 SAMEA112433185 2768039 uncultured Duncaniella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433185 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:38Z INSDC last update 2023-02-03T00:50:38Z INSDC status public Submitter Id MGBC163068 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.05 completeness software CheckM contamination score 3.24 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474065 sample name MGBC163068 scientific_name uncultured Duncaniella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543496 SAMEA112433186 538949 uncultured Alistipes sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433186 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:38Z INSDC last update 2023-02-03T00:50:38Z INSDC status public Submitter Id MGBC163069 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.03 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474065 sample name MGBC163069 scientific_name uncultured Alistipes sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543497 SAMEA112433187 33959 Lactobacillus johnsonii ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433187 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:38Z INSDC last update 2023-02-03T00:50:38Z INSDC status public Submitter Id MGBC163070 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.96 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474065 sample name MGBC163070 scientific_name Lactobacillus johnsonii sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543498 SAMEA112433188 446043 uncultured Lachnospira sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433188 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:38Z INSDC last update 2023-02-03T00:50:38Z INSDC status public Submitter Id MGBC163071 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.65 completeness software CheckM contamination score 0.22 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474065 sample name MGBC163071 scientific_name uncultured Lachnospira sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543499 SAMEA112433189 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433189 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:44Z INSDC last update 2023-02-03T00:50:44Z INSDC status public Submitter Id MGBC163072 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.10 completeness software CheckM contamination score 0.16 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474065 sample name MGBC163072 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543500 SAMEA112433190 818 Bacteroides thetaiotaomicron ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433190 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:44Z INSDC last update 2023-02-03T00:50:44Z INSDC status public Submitter Id MGBC163073 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.09 completeness software CheckM contamination score 0.63 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474065 sample name MGBC163073 scientific_name Bacteroides thetaiotaomicron sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543501 SAMEA112433191 172733 uncultured Eubacteriales bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433191 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:44Z INSDC last update 2023-02-03T00:50:44Z INSDC status public Submitter Id MGBC163074 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.98 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474065 sample name MGBC163074 scientific_name uncultured Eubacteriales bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543502 SAMEA112433192 239935 Akkermansia muciniphila ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433192 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:44Z INSDC last update 2023-02-03T00:50:44Z INSDC status public Submitter Id MGBC163075 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.95 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474065 sample name MGBC163075 scientific_name Akkermansia muciniphila sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543503 SAMEA112433193 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433193 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:44Z INSDC last update 2023-02-03T00:50:44Z INSDC status public Submitter Id MGBC163076 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.54 completeness software CheckM contamination score 0.38 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474065 sample name MGBC163076 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543504 SAMEA112433194 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433194 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:44Z INSDC last update 2023-02-03T00:50:44Z INSDC status public Submitter Id MGBC163077 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.52 completeness software CheckM contamination score 0.12 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474065 sample name MGBC163077 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543505 SAMEA112433195 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433195 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:44Z INSDC last update 2023-02-03T00:50:44Z INSDC status public Submitter Id MGBC163078 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.12 completeness software CheckM contamination score 1.26 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474065 sample name MGBC163078 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543506 SAMEA112433196 2768039 uncultured Duncaniella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433196 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:44Z INSDC last update 2023-02-03T00:50:44Z INSDC status public Submitter Id MGBC163079 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.98 completeness software CheckM contamination score 0.88 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474065 sample name MGBC163079 scientific_name uncultured Duncaniella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543507 SAMEA112433197 707003 uncultured Oscillospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433197 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:48:57Z INSDC last update 2023-02-03T00:48:57Z INSDC status public Submitter Id MGBC163080 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.64 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474065 sample name MGBC163080 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543508 SAMEA112433198 2163171 uncultured Kineothrix sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433198 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:48:57Z INSDC last update 2023-02-03T00:48:57Z INSDC status public Submitter Id MGBC163081 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.43 completeness software CheckM contamination score 0.02 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474065 sample name MGBC163081 scientific_name uncultured Kineothrix sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543509 SAMEA112433199 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433199 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:48:57Z INSDC last update 2023-02-03T00:48:57Z INSDC status public Submitter Id MGBC163082 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.39 completeness software CheckM contamination score 0.38 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474065 sample name MGBC163082 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543510 SAMEA112433200 1729681 uncultured Faecalibaculum sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433200 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:48:57Z INSDC last update 2023-02-03T00:48:57Z INSDC status public Submitter Id MGBC163083 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.22 completeness software CheckM contamination score 2.29 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474065 sample name MGBC163083 scientific_name uncultured Faecalibaculum sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543511 SAMEA112433201 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433201 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:48:57Z INSDC last update 2023-02-03T00:48:57Z INSDC status public Submitter Id MGBC163084 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.14 completeness software CheckM contamination score 2.75 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474065 sample name MGBC163084 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543512 SAMEA112433202 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433202 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:48:57Z INSDC last update 2023-02-03T00:48:57Z INSDC status public Submitter Id MGBC163086 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 95.72 completeness software CheckM contamination score 1.13 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474065 sample name MGBC163086 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543513 SAMEA112433203 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433203 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:48:57Z INSDC last update 2023-02-03T00:48:57Z INSDC status public Submitter Id MGBC163087 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 94.71 completeness software CheckM contamination score 1.87 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474065 sample name MGBC163087 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543514 SAMEA112433204 224209 uncultured Bacilli bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433204 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:48:57Z INSDC last update 2023-02-03T00:48:57Z INSDC status public Submitter Id MGBC163088 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 92.13 completeness software CheckM contamination score 0.56 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474065 sample name MGBC163088 scientific_name uncultured Bacilli bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543515 SAMEA112433205 2054177 Christensenellaceae bacterium assembly software metaSPAdes_v3.10.1 broad-scale environmental context mouse gut collection date not provided sample derived from SRR12474065 geographic location (longitude) not provided DD binning parameters default parameters, kmer: 4 contamination score 0.17 % ENA-FIRST-PUBLIC 2023-02-03T00:49:04Z ENA-LAST-UPDATE 2023-02-03T00:49:04Z completeness software CheckM geographic location (country and/or sea) USA binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) organism Candidatus Borkfalkiaceae bacterium assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics taxonomic identity marker multi-marker approach completeness score 91.39 % environmental medium Distal colon geographic location (latitude) not provided DD scientific_name Candidatus Borkfalkiaceae bacterium common name investigation type metagenome-assembled genome local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sequencing method Illumina isolation_source Distal colon ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 ERS14543516 SAMEA112433206 297316 uncultured Turicibacter sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433206 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:04Z INSDC last update 2023-02-03T00:49:04Z INSDC status public Submitter Id MGBC163090 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 90.77 completeness software CheckM contamination score 2.03 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474065 sample name MGBC163090 scientific_name uncultured Turicibacter sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543517 SAMEA112433207 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433207 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:04Z INSDC last update 2023-02-03T00:49:04Z INSDC status public Submitter Id MGBC163091 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 89.97 completeness software CheckM contamination score 4.02 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474065 sample name MGBC163091 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543518 SAMEA112433208 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433208 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:04Z INSDC last update 2023-02-03T00:49:04Z INSDC status public Submitter Id MGBC163092 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 89.70 completeness software CheckM contamination score 2.52 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474065 sample name MGBC163092 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543519 SAMEA112433209 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433209 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:04Z INSDC last update 2023-02-03T00:49:04Z INSDC status public Submitter Id MGBC163093 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 89.65 completeness software CheckM contamination score 1.15 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474065 sample name MGBC163093 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543520 SAMEA112433210 1671927 uncultured Acetatifactor sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433210 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:04Z INSDC last update 2023-02-03T00:49:04Z INSDC status public Submitter Id MGBC163094 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 89.10 completeness software CheckM contamination score 2.30 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474065 sample name MGBC163094 scientific_name uncultured Acetatifactor sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543521 SAMEA112433211 244328 uncultured Clostridia bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433211 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:04Z INSDC last update 2023-02-03T00:49:04Z INSDC status public Submitter Id MGBC163095 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 83.37 completeness software CheckM contamination score 0.78 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474065 sample name MGBC163095 scientific_name uncultured Clostridia bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543522 SAMEA112433212 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433212 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:04Z INSDC last update 2023-02-03T00:49:04Z INSDC status public Submitter Id MGBC163096 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 76.31 completeness software CheckM contamination score 2.18 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474065 sample name MGBC163096 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543523 SAMEA112433213 165185 uncultured Eubacterium sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433213 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:11Z INSDC last update 2023-02-03T00:49:11Z INSDC status public Submitter Id MGBC163097 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 76.26 completeness software CheckM contamination score 2.37 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474065 sample name MGBC163097 scientific_name uncultured Eubacterium sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543524 SAMEA112433214 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433214 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:11Z INSDC last update 2023-02-03T00:49:11Z INSDC status public Submitter Id MGBC163098 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 76.08 completeness software CheckM contamination score 2.30 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474065 sample name MGBC163098 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543525 SAMEA112433215 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433215 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:11Z INSDC last update 2023-02-03T00:49:11Z INSDC status public Submitter Id MGBC163099 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 75.84 completeness software CheckM contamination score 0.55 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474065 sample name MGBC163099 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543526 SAMEA112433216 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433216 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:11Z INSDC last update 2023-02-03T00:49:11Z INSDC status public Submitter Id MGBC163100 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 73.47 completeness software CheckM contamination score 1.67 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474065 sample name MGBC163100 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543527 SAMEA112433217 349265 uncultured Atopostipes sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433217 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:11Z INSDC last update 2023-02-03T00:49:11Z INSDC status public Submitter Id MGBC163101 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 66.76 completeness software CheckM contamination score 1.33 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474065 sample name MGBC163101 scientific_name uncultured Atopostipes sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543528 SAMEA112433218 165185 uncultured Eubacterium sp. ENA-FIRST-PUBLIC 2023-02-03T00:49:11Z ENA-LAST-UPDATE 2023-02-03T00:49:11Z External Id SAMEA112433218 INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:11Z INSDC last update 2023-02-03T00:49:11Z INSDC status public Submitter Id MGBC163102 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 62.16 completeness software CheckM contamination score 1.54 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474065 sample name MGBC163102 scientific_name uncultured Eubacterium sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543529 SAMEA112433219 2768039 uncultured Duncaniella sp. ENA-FIRST-PUBLIC 2023-02-03T00:49:11Z ENA-LAST-UPDATE 2023-02-03T00:49:11Z External Id SAMEA112433219 INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:11Z INSDC last update 2023-02-03T00:49:11Z INSDC status public Submitter Id MGBC163103 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.43 completeness software CheckM contamination score 1.01 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474094 sample name MGBC163103 scientific_name uncultured Duncaniella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543530 SAMEA112433220 2768039 uncultured Duncaniella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433220 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:11Z INSDC last update 2023-02-03T00:49:11Z INSDC status public Submitter Id MGBC163104 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.41 completeness software CheckM contamination score 0.38 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474094 sample name MGBC163104 scientific_name uncultured Duncaniella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543531 SAMEA112433221 59620 uncultured Clostridium sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433221 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:18Z INSDC last update 2023-02-03T00:49:18Z INSDC status public Submitter Id MGBC163105 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.19 completeness software CheckM contamination score 1.01 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474094 sample name MGBC163105 scientific_name uncultured Clostridium sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543532 SAMEA112433222 2321400 uncultured Atopobiaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433222 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:18Z INSDC last update 2023-02-03T00:49:18Z INSDC status public Submitter Id MGBC163106 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.19 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474094 sample name MGBC163106 scientific_name uncultured Atopobiaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543533 SAMEA112433223 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433223 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:18Z INSDC last update 2023-02-03T00:49:18Z INSDC status public Submitter Id MGBC163107 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.05 completeness software CheckM contamination score 0.38 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474094 sample name MGBC163107 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543534 SAMEA112433224 2768039 uncultured Duncaniella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433224 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:18Z INSDC last update 2023-02-03T00:49:18Z INSDC status public Submitter Id MGBC163108 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.05 completeness software CheckM contamination score 0.75 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474094 sample name MGBC163108 scientific_name uncultured Duncaniella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543535 SAMEA112433225 538949 uncultured Alistipes sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433225 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:18Z INSDC last update 2023-02-03T00:49:18Z INSDC status public Submitter Id MGBC163109 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.03 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474094 sample name MGBC163109 scientific_name uncultured Alistipes sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543536 SAMEA112433226 1598 Limosilactobacillus reuteri ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433226 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:18Z INSDC last update 2023-02-03T00:49:18Z INSDC status public Submitter Id MGBC163110 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.90 completeness software CheckM contamination score 0.55 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474094 sample name MGBC163110 scientific_name Limosilactobacillus reuteri sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543537 SAMEA112433227 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433227 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:18Z INSDC last update 2023-02-03T00:49:18Z INSDC status public Submitter Id MGBC163111 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.41 completeness software CheckM contamination score 1.90 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474094 sample name MGBC163111 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543538 SAMEA112433228 818 Bacteroides thetaiotaomicron ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433228 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:18Z INSDC last update 2023-02-03T00:49:18Z INSDC status public Submitter Id MGBC163112 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.09 completeness software CheckM contamination score 0.57 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474094 sample name MGBC163112 scientific_name Bacteroides thetaiotaomicron sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543539 SAMEA112433229 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433229 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:25Z INSDC last update 2023-02-03T00:49:25Z INSDC status public Submitter Id MGBC163113 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.97 completeness software CheckM contamination score 0.68 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474094 sample name MGBC163113 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543540 SAMEA112433230 239935 Akkermansia muciniphila ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433230 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:25Z INSDC last update 2023-02-03T00:49:25Z INSDC status public Submitter Id MGBC163114 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.95 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474094 sample name MGBC163114 scientific_name Akkermansia muciniphila sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543541 SAMEA112433231 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433231 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:25Z INSDC last update 2023-02-03T00:49:25Z INSDC status public Submitter Id MGBC163115 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.90 completeness software CheckM contamination score 0.38 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474094 sample name MGBC163115 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543542 SAMEA112433232 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433232 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:25Z INSDC last update 2023-02-03T00:49:25Z INSDC status public Submitter Id MGBC163116 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.58 completeness software CheckM contamination score 4.31 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474094 sample name MGBC163116 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543543 SAMEA112433233 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433233 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:25Z INSDC last update 2023-02-03T00:49:25Z INSDC status public Submitter Id MGBC163117 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.52 completeness software CheckM contamination score 0.12 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474094 sample name MGBC163117 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543544 SAMEA112433234 172733 uncultured Eubacteriales bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433234 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:25Z INSDC last update 2023-02-03T00:49:25Z INSDC status public Submitter Id MGBC163118 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.31 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474094 sample name MGBC163118 scientific_name uncultured Eubacteriales bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543545 SAMEA112433235 1751881 uncultured Hungatella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433235 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:25Z INSDC last update 2023-02-03T00:49:25Z INSDC status public Submitter Id MGBC163119 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.88 completeness software CheckM contamination score 0.73 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474094 sample name MGBC163119 scientific_name uncultured Hungatella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543546 SAMEA112433236 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433236 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:25Z INSDC last update 2023-02-03T00:49:25Z INSDC status public Submitter Id MGBC163120 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.64 completeness software CheckM contamination score 2.37 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474094 sample name MGBC163120 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543547 SAMEA112433237 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433237 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:33Z INSDC last update 2023-02-03T00:49:33Z INSDC status public Submitter Id MGBC163121 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.64 completeness software CheckM contamination score 1.15 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474094 sample name MGBC163121 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543548 SAMEA112433238 1690 Bifidobacterium pseudolongum subsp. globosum ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433238 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:33Z INSDC last update 2023-02-03T00:49:33Z INSDC status public Submitter Id MGBC163122 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.59 completeness software CheckM contamination score 0.44 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474094 sample name MGBC163122 scientific_name Bifidobacterium pseudolongum subsp. globosum sequencing method Illumina taxonomic identity marker multi-marker approach sub_species globosum ERS14543549 SAMEA112433239 244328 uncultured Clostridia bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433239 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:33Z INSDC last update 2023-02-03T00:49:33Z INSDC status public Submitter Id MGBC163123 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 95.81 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474094 sample name MGBC163123 scientific_name uncultured Clostridia bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543550 SAMEA112433240 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433240 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:33Z INSDC last update 2023-02-03T00:49:33Z INSDC status public Submitter Id MGBC163124 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 95.68 completeness software CheckM contamination score 2.53 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474094 sample name MGBC163124 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543551 SAMEA112433241 2321402 uncultured Eggerthellaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433241 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:33Z INSDC last update 2023-02-03T00:49:33Z INSDC status public Submitter Id MGBC163125 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 95.22 completeness software CheckM contamination score 0.20 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474094 sample name MGBC163125 scientific_name uncultured Eggerthellaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543552 SAMEA112433242 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433242 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:33Z INSDC last update 2023-02-03T00:49:33Z INSDC status public Submitter Id MGBC163126 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 94.71 completeness software CheckM contamination score 2.30 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474094 sample name MGBC163126 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543553 SAMEA112433243 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433243 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:33Z INSDC last update 2023-02-03T00:49:33Z INSDC status public Submitter Id MGBC163127 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 94.21 completeness software CheckM contamination score 0.75 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474094 sample name MGBC163127 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543554 SAMEA112433244 487175 Parasutterella excrementihominis ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433244 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:33Z INSDC last update 2023-02-03T00:49:33Z INSDC status public Submitter Id MGBC163128 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 93.61 completeness software CheckM contamination score 1.92 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474094 sample name MGBC163128 scientific_name Parasutterella excrementihominis sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543555 SAMEA112433245 172733 uncultured Eubacteriales bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433245 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:40Z INSDC last update 2023-02-03T00:49:40Z INSDC status public Submitter Id MGBC163129 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 93.54 completeness software CheckM contamination score 0.81 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474094 sample name MGBC163129 scientific_name uncultured Eubacteriales bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543556 SAMEA112433246 2054177 Christensenellaceae bacterium assembly software metaSPAdes_v3.10.1 broad-scale environmental context mouse gut collection date not provided sample derived from SRR12474094 geographic location (longitude) not provided DD binning parameters default parameters, kmer: 4 contamination score 1.64 % ENA-FIRST-PUBLIC 2023-02-03T00:49:40Z ENA-LAST-UPDATE 2023-02-03T00:49:40Z completeness software CheckM geographic location (country and/or sea) USA binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) organism Candidatus Borkfalkiaceae bacterium assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics taxonomic identity marker multi-marker approach completeness score 93.54 % environmental medium Distal colon geographic location (latitude) not provided DD scientific_name Candidatus Borkfalkiaceae bacterium common name investigation type metagenome-assembled genome local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sequencing method Illumina isolation_source Distal colon ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 ERS14543557 SAMEA112433247 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433247 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:40Z INSDC last update 2023-02-03T00:49:40Z INSDC status public Submitter Id MGBC163131 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 92.98 completeness software CheckM contamination score 1.81 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474094 sample name MGBC163131 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543558 SAMEA112433248 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433248 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:40Z INSDC last update 2023-02-03T00:49:40Z INSDC status public Submitter Id MGBC163132 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 92.52 completeness software CheckM contamination score 0.57 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474094 sample name MGBC163132 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543559 SAMEA112433249 172733 uncultured Eubacteriales bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433249 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:40Z INSDC last update 2023-02-03T00:49:40Z INSDC status public Submitter Id MGBC163133 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 92.05 completeness software CheckM contamination score 0.89 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474094 sample name MGBC163133 scientific_name uncultured Eubacteriales bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543560 SAMEA112433250 286138 uncultured Dorea sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433250 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:40Z INSDC last update 2023-02-03T00:49:40Z INSDC status public Submitter Id MGBC163134 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 91.49 completeness software CheckM contamination score 1.66 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474094 sample name MGBC163134 scientific_name uncultured Dorea sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543561 SAMEA112433251 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433251 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:40Z INSDC last update 2023-02-03T00:49:40Z INSDC status public Submitter Id MGBC163135 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 91.13 completeness software CheckM contamination score 1.48 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474094 sample name MGBC163135 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543562 SAMEA112433252 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433252 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:40Z INSDC last update 2023-02-03T00:49:40Z INSDC status public Submitter Id MGBC163136 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 90.80 completeness software CheckM contamination score 2.49 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474094 sample name MGBC163136 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543563 SAMEA112433253 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433253 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:46Z INSDC last update 2023-02-03T00:49:46Z INSDC status public Submitter Id MGBC163137 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 89.24 completeness software CheckM contamination score 0.16 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474094 sample name MGBC163137 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543564 SAMEA112433254 1671927 uncultured Acetatifactor sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433254 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:46Z INSDC last update 2023-02-03T00:49:46Z INSDC status public Submitter Id MGBC163138 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 88.88 completeness software CheckM contamination score 2.01 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474094 sample name MGBC163138 scientific_name uncultured Acetatifactor sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543565 SAMEA112433255 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433255 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:46Z INSDC last update 2023-02-03T00:49:46Z INSDC status public Submitter Id MGBC163139 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 88.84 completeness software CheckM contamination score 2.53 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474094 sample name MGBC163139 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543566 SAMEA112433256 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433256 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:46Z INSDC last update 2023-02-03T00:49:46Z INSDC status public Submitter Id MGBC163140 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 87.71 completeness software CheckM contamination score 4.47 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474094 sample name MGBC163140 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543567 SAMEA112433257 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433257 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:46Z INSDC last update 2023-02-03T00:49:46Z INSDC status public Submitter Id MGBC163141 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 86.93 completeness software CheckM contamination score 1.41 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474094 sample name MGBC163141 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543568 SAMEA112433258 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433258 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:46Z INSDC last update 2023-02-03T00:49:46Z INSDC status public Submitter Id MGBC163142 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 86.17 completeness software CheckM contamination score 1.44 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474094 sample name MGBC163142 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543569 SAMEA112433259 286138 uncultured Dorea sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433259 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:46Z INSDC last update 2023-02-03T00:49:46Z INSDC status public Submitter Id MGBC163143 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 85.19 completeness software CheckM contamination score 1.17 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474094 sample name MGBC163143 scientific_name uncultured Dorea sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543570 SAMEA112433260 1796620 Acutalibacter muris ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433260 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:46Z INSDC last update 2023-02-03T00:49:46Z INSDC status public Submitter Id MGBC163144 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 80.81 completeness software CheckM contamination score 0.17 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474094 sample name MGBC163144 scientific_name Acutalibacter muris sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543571 SAMEA112433261 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433261 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:53Z INSDC last update 2023-02-03T00:49:53Z INSDC status public Submitter Id MGBC163145 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 80.73 completeness software CheckM contamination score 2.32 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474094 sample name MGBC163145 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543572 SAMEA112433262 2676055 uncultured Schaedlerella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433262 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:53Z INSDC last update 2023-02-03T00:49:53Z INSDC status public Submitter Id MGBC163146 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 79.48 completeness software CheckM contamination score 2.34 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474094 sample name MGBC163146 scientific_name uncultured Schaedlerella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543573 SAMEA112433263 33959 Lactobacillus johnsonii ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433263 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:53Z INSDC last update 2023-02-03T00:49:53Z INSDC status public Submitter Id MGBC163147 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 78.81 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474094 sample name MGBC163147 scientific_name Lactobacillus johnsonii sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543574 SAMEA112433264 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433264 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:53Z INSDC last update 2023-02-03T00:49:53Z INSDC status public Submitter Id MGBC163148 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 78.38 completeness software CheckM contamination score 1.90 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474094 sample name MGBC163148 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543575 SAMEA112433265 1671927 uncultured Acetatifactor sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433265 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:53Z INSDC last update 2023-02-03T00:49:53Z INSDC status public Submitter Id MGBC163149 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 77.16 completeness software CheckM contamination score 2.78 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474094 sample name MGBC163149 scientific_name uncultured Acetatifactor sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543576 SAMEA112433266 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433266 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:53Z INSDC last update 2023-02-03T00:49:53Z INSDC status public Submitter Id MGBC163150 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 72.36 completeness software CheckM contamination score 0.14 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474094 sample name MGBC163150 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543577 SAMEA112433267 2321402 uncultured Eggerthellaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433267 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:53Z INSDC last update 2023-02-03T00:49:53Z INSDC status public Submitter Id MGBC163151 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 66.57 completeness software CheckM contamination score 0.55 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474094 sample name MGBC163151 scientific_name uncultured Eggerthellaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543578 SAMEA112433268 331630 uncultured Erysipelotrichaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433268 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:54Z INSDC last update 2023-02-03T00:49:54Z INSDC status public Submitter Id MGBC163152 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 100 completeness software CheckM contamination score 1.12 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474092 sample name MGBC163152 scientific_name uncultured Erysipelotrichaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543579 SAMEA112433269 487175 Parasutterella excrementihominis ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433269 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:00Z INSDC last update 2023-02-03T00:50:00Z INSDC status public Submitter Id MGBC163153 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 100 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474092 sample name MGBC163153 scientific_name Parasutterella excrementihominis sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543580 SAMEA112433270 2768039 uncultured Duncaniella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433270 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:00Z INSDC last update 2023-02-03T00:50:00Z INSDC status public Submitter Id MGBC163154 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.43 completeness software CheckM contamination score 1.92 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474092 sample name MGBC163154 scientific_name uncultured Duncaniella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543581 SAMEA112433271 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433271 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:00Z INSDC last update 2023-02-03T00:50:00Z INSDC status public Submitter Id MGBC163155 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.43 completeness software CheckM contamination score 0.38 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474092 sample name MGBC163155 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543582 SAMEA112433272 2768039 uncultured Duncaniella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433272 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:00Z INSDC last update 2023-02-03T00:50:00Z INSDC status public Submitter Id MGBC163156 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.43 completeness software CheckM contamination score 0.38 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474092 sample name MGBC163156 scientific_name uncultured Duncaniella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543583 SAMEA112433273 707003 uncultured Oscillospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433273 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:01Z INSDC last update 2023-02-03T00:50:01Z INSDC status public Submitter Id MGBC163157 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.32 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474092 sample name MGBC163157 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543584 SAMEA112433274 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433274 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:01Z INSDC last update 2023-02-03T00:50:01Z INSDC status public Submitter Id MGBC163159 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.52 completeness software CheckM contamination score 3.38 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474092 sample name MGBC163159 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543585 SAMEA112433275 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433275 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:01Z INSDC last update 2023-02-03T00:50:01Z INSDC status public Submitter Id MGBC163160 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.10 completeness software CheckM contamination score 4.43 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474092 sample name MGBC163160 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543586 SAMEA112433276 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433276 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:01Z INSDC last update 2023-02-03T00:50:01Z INSDC status public Submitter Id MGBC163161 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.10 completeness software CheckM contamination score 0.63 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474092 sample name MGBC163161 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543587 SAMEA112433277 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433277 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:09Z INSDC last update 2023-02-03T00:50:09Z INSDC status public Submitter Id MGBC163162 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.98 completeness software CheckM contamination score 0.57 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474092 sample name MGBC163162 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543588 SAMEA112433278 172733 uncultured Eubacteriales bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433278 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:09Z INSDC last update 2023-02-03T00:50:09Z INSDC status public Submitter Id MGBC163163 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.98 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474092 sample name MGBC163163 scientific_name uncultured Eubacteriales bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543589 SAMEA112433279 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433279 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:09Z INSDC last update 2023-02-03T00:50:09Z INSDC status public Submitter Id MGBC163164 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.97 completeness software CheckM contamination score 1.35 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474092 sample name MGBC163164 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543590 SAMEA112433280 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433280 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:09Z INSDC last update 2023-02-03T00:50:09Z INSDC status public Submitter Id MGBC163166 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.58 completeness software CheckM contamination score 1.15 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474092 sample name MGBC163166 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543591 SAMEA112433281 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433281 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:09Z INSDC last update 2023-02-03T00:50:09Z INSDC status public Submitter Id MGBC163167 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.58 completeness software CheckM contamination score 2.86 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474092 sample name MGBC163167 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543592 SAMEA112433282 165185 uncultured Eubacterium sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433282 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:09Z INSDC last update 2023-02-03T00:50:09Z INSDC status public Submitter Id MGBC163168 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.44 completeness software CheckM contamination score 4.51 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474092 sample name MGBC163168 scientific_name uncultured Eubacterium sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543593 SAMEA112433283 538949 uncultured Alistipes sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433283 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:09Z INSDC last update 2023-02-03T00:50:09Z INSDC status public Submitter Id MGBC163169 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.35 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474092 sample name MGBC163169 scientific_name uncultured Alistipes sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543594 SAMEA112433284 1690 Bifidobacterium pseudolongum subsp. globosum ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433284 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:09Z INSDC last update 2023-02-03T00:50:09Z INSDC status public Submitter Id MGBC163170 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.33 completeness software CheckM contamination score 0.49 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474092 sample name MGBC163170 scientific_name Bifidobacterium pseudolongum subsp. globosum sequencing method Illumina taxonomic identity marker multi-marker approach sub_species globosum ERS14543595 SAMEA112433285 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433285 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:16Z INSDC last update 2023-02-03T00:50:16Z INSDC status public Submitter Id MGBC163171 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.09 completeness software CheckM contamination score 3.77 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474092 sample name MGBC163171 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543596 SAMEA112433286 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433286 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:16Z INSDC last update 2023-02-03T00:50:16Z INSDC status public Submitter Id MGBC163172 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.88 completeness software CheckM contamination score 0.12 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474092 sample name MGBC163172 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543597 SAMEA112433287 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433287 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:16Z INSDC last update 2023-02-03T00:50:16Z INSDC status public Submitter Id MGBC163173 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.85 completeness software CheckM contamination score 1.89 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474092 sample name MGBC163173 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543598 SAMEA112433288 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433288 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:16Z INSDC last update 2023-02-03T00:50:16Z INSDC status public Submitter Id MGBC163174 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.83 completeness software CheckM contamination score 0.16 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474092 sample name MGBC163174 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543599 SAMEA112433289 1757166 uncultured Ruminiclostridium sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433289 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:16Z INSDC last update 2023-02-03T00:50:16Z INSDC status public Submitter Id MGBC163175 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.42 completeness software CheckM contamination score 0.84 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474092 sample name MGBC163175 scientific_name uncultured Ruminiclostridium sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543600 SAMEA112433290 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433290 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:16Z INSDC last update 2023-02-03T00:50:16Z INSDC status public Submitter Id MGBC163176 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 95.28 completeness software CheckM contamination score 2.87 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474092 sample name MGBC163176 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543601 SAMEA112433291 2768039 uncultured Duncaniella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433291 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:16Z INSDC last update 2023-02-03T00:50:16Z INSDC status public Submitter Id MGBC163177 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 95.26 completeness software CheckM contamination score 0.41 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474092 sample name MGBC163177 scientific_name uncultured Duncaniella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543602 SAMEA112433292 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433292 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:16Z INSDC last update 2023-02-03T00:50:16Z INSDC status public Submitter Id MGBC163178 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 94.92 completeness software CheckM contamination score 1.72 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474092 sample name MGBC163178 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543603 SAMEA112433293 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433293 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:24Z INSDC last update 2023-02-03T00:50:24Z INSDC status public Submitter Id MGBC163179 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 92.93 completeness software CheckM contamination score 2.27 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474092 sample name MGBC163179 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543604 SAMEA112433294 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433294 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:24Z INSDC last update 2023-02-03T00:50:24Z INSDC status public Submitter Id MGBC163180 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 91.87 completeness software CheckM contamination score 1.26 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474092 sample name MGBC163180 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543605 SAMEA112433295 818 Bacteroides thetaiotaomicron ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433295 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:24Z INSDC last update 2023-02-03T00:50:24Z INSDC status public Submitter Id MGBC163181 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 90.97 completeness software CheckM contamination score 0.57 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474092 sample name MGBC163181 scientific_name Bacteroides thetaiotaomicron sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543606 SAMEA112433296 33959 Lactobacillus johnsonii ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433296 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:24Z INSDC last update 2023-02-03T00:50:24Z INSDC status public Submitter Id MGBC163182 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 90.43 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474092 sample name MGBC163182 scientific_name Lactobacillus johnsonii sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543607 SAMEA112433297 165185 uncultured Eubacterium sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433297 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:24Z INSDC last update 2023-02-03T00:50:24Z INSDC status public Submitter Id MGBC163183 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 89.82 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474092 sample name MGBC163183 scientific_name uncultured Eubacterium sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543608 SAMEA112433298 1926559 uncultured Emergencia sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433298 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:24Z INSDC last update 2023-02-03T00:50:24Z INSDC status public Submitter Id MGBC163184 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 89.55 completeness software CheckM contamination score 1.42 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474092 sample name MGBC163184 scientific_name uncultured Emergencia sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543609 SAMEA112433299 286138 uncultured Dorea sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433299 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:24Z INSDC last update 2023-02-03T00:50:24Z INSDC status public Submitter Id MGBC163185 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 89.00 completeness software CheckM contamination score 1.66 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474092 sample name MGBC163185 scientific_name uncultured Dorea sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543610 SAMEA112433300 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433300 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:24Z INSDC last update 2023-02-03T00:50:24Z INSDC status public Submitter Id MGBC163186 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 88.51 completeness software CheckM contamination score 2.98 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474092 sample name MGBC163186 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543611 SAMEA112433301 2321402 uncultured Eggerthellaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433301 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:31Z INSDC last update 2023-02-03T00:50:31Z INSDC status public Submitter Id MGBC163187 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 87.33 completeness software CheckM contamination score 0.27 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474092 sample name MGBC163187 scientific_name uncultured Eggerthellaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543612 SAMEA112433302 286138 uncultured Dorea sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433302 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:31Z INSDC last update 2023-02-03T00:50:31Z INSDC status public Submitter Id MGBC163188 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 86.40 completeness software CheckM contamination score 1.66 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474092 sample name MGBC163188 scientific_name uncultured Dorea sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543613 SAMEA112433303 2163171 uncultured Kineothrix sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433303 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:31Z INSDC last update 2023-02-03T00:50:31Z INSDC status public Submitter Id MGBC163189 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 85.19 completeness software CheckM contamination score 0.91 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474092 sample name MGBC163189 scientific_name uncultured Kineothrix sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543614 SAMEA112433304 349265 uncultured Atopostipes sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433304 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:31Z INSDC last update 2023-02-03T00:50:31Z INSDC status public Submitter Id MGBC163190 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 84.15 completeness software CheckM contamination score 3.39 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474092 sample name MGBC163190 scientific_name uncultured Atopostipes sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543615 SAMEA112433305 2676055 uncultured Schaedlerella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433305 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:31Z INSDC last update 2023-02-03T00:50:31Z INSDC status public Submitter Id MGBC163191 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 83.35 completeness software CheckM contamination score 2.70 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474092 sample name MGBC163191 scientific_name uncultured Schaedlerella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543616 SAMEA112433306 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433306 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:31Z INSDC last update 2023-02-03T00:50:31Z INSDC status public Submitter Id MGBC163192 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 83.14 completeness software CheckM contamination score 0.57 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474092 sample name MGBC163192 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543617 SAMEA112433307 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433307 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:31Z INSDC last update 2023-02-03T00:50:31Z INSDC status public Submitter Id MGBC163193 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 82.57 completeness software CheckM contamination score 0.98 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474092 sample name MGBC163193 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543618 SAMEA112433308 875803 uncultured Adlercreutzia sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433308 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:31Z INSDC last update 2023-02-03T00:50:31Z INSDC status public Submitter Id MGBC163194 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 82.16 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474092 sample name MGBC163194 scientific_name uncultured Adlercreutzia sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543619 SAMEA112433309 446043 uncultured Lachnospira sp. ENA-FIRST-PUBLIC 2023-02-03T00:50:38Z ENA-LAST-UPDATE 2023-02-03T00:50:38Z External Id SAMEA112433309 INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:38Z INSDC last update 2023-02-03T00:50:38Z INSDC status public Submitter Id MGBC163195 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 80.59 completeness software CheckM contamination score 0.73 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474092 sample name MGBC163195 scientific_name uncultured Lachnospira sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543620 SAMEA112433310 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433310 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:38Z INSDC last update 2023-02-03T00:50:38Z INSDC status public Submitter Id MGBC163196 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 71.93 completeness software CheckM contamination score 2.39 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474092 sample name MGBC163196 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543621 SAMEA112433311 286138 uncultured Dorea sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433311 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:38Z INSDC last update 2023-02-03T00:50:38Z INSDC status public Submitter Id MGBC163197 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 68.75 completeness software CheckM contamination score 1.75 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474092 sample name MGBC163197 scientific_name uncultured Dorea sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543622 SAMEA112433312 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433312 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:38Z INSDC last update 2023-02-03T00:50:38Z INSDC status public Submitter Id MGBC163198 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 66.83 completeness software CheckM contamination score 0.32 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474092 sample name MGBC163198 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543623 SAMEA112433313 239935 Akkermansia muciniphila ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433313 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:38Z INSDC last update 2023-02-03T00:50:38Z INSDC status public Submitter Id MGBC163199 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 66.28 completeness software CheckM contamination score 1.36 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474092 sample name MGBC163199 scientific_name Akkermansia muciniphila sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543624 SAMEA112433314 244328 uncultured Clostridia bacterium ENA-FIRST-PUBLIC 2023-02-03T00:50:38Z ENA-LAST-UPDATE 2023-02-03T00:50:38Z External Id SAMEA112433314 INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:38Z INSDC last update 2023-02-03T00:50:38Z INSDC status public Submitter Id MGBC163200 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 65.59 completeness software CheckM contamination score 2.45 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474092 sample name MGBC163200 scientific_name uncultured Clostridia bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543625 SAMEA112433315 344338 uncultured Bacillota bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433315 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:38Z INSDC last update 2023-02-03T00:50:38Z INSDC status public Submitter Id MGBC163201 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 62.99 completeness software CheckM contamination score 0.54 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474092 sample name MGBC163201 scientific_name uncultured Firmicutes bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543626 SAMEA112433316 487175 Parasutterella excrementihominis ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433316 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:38Z INSDC last update 2023-02-03T00:50:38Z INSDC status public Submitter Id MGBC163202 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 100 completeness software CheckM contamination score 0.63 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474070 sample name MGBC163202 scientific_name Parasutterella excrementihominis sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543627 SAMEA112433317 1690 Bifidobacterium pseudolongum subsp. globosum ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433317 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:44Z INSDC last update 2023-02-03T00:50:44Z INSDC status public Submitter Id MGBC163203 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.77 completeness software CheckM contamination score 0.44 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474070 sample name MGBC163203 scientific_name Bifidobacterium pseudolongum subsp. globosum sequencing method Illumina taxonomic identity marker multi-marker approach sub_species globosum ERS14543628 SAMEA112433318 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433318 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:44Z INSDC last update 2023-02-03T00:50:44Z INSDC status public Submitter Id MGBC163204 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.41 completeness software CheckM contamination score 0.38 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474070 sample name MGBC163204 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543629 SAMEA112433319 2768039 uncultured Duncaniella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433319 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:44Z INSDC last update 2023-02-03T00:50:44Z INSDC status public Submitter Id MGBC163205 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.41 completeness software CheckM contamination score 0.38 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474070 sample name MGBC163205 scientific_name uncultured Duncaniella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543630 SAMEA112433320 818 Bacteroides thetaiotaomicron ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433320 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:44Z INSDC last update 2023-02-03T00:50:44Z INSDC status public Submitter Id MGBC163206 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.36 completeness software CheckM contamination score 0.89 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474070 sample name MGBC163206 scientific_name Bacteroides thetaiotaomicron sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543631 SAMEA112433321 707003 uncultured Oscillospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433321 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:44Z INSDC last update 2023-02-03T00:50:44Z INSDC status public Submitter Id MGBC163207 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.32 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474070 sample name MGBC163207 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543632 SAMEA112433322 2321400 uncultured Atopobiaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433322 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:44Z INSDC last update 2023-02-03T00:50:44Z INSDC status public Submitter Id MGBC163208 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.19 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474070 sample name MGBC163208 scientific_name uncultured Atopobiaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543633 SAMEA112433323 59620 uncultured Clostridium sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433323 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:44Z INSDC last update 2023-02-03T00:50:44Z INSDC status public Submitter Id MGBC163209 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.19 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474070 sample name MGBC163209 scientific_name uncultured Clostridium sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543634 SAMEA112433324 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433324 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:44Z INSDC last update 2023-02-03T00:50:44Z INSDC status public Submitter Id MGBC163210 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.05 completeness software CheckM contamination score 0.38 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474070 sample name MGBC163210 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543635 SAMEA112433325 538949 uncultured Alistipes sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433325 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:48:57Z INSDC last update 2023-02-03T00:48:57Z INSDC status public Submitter Id MGBC163211 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.03 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474070 sample name MGBC163211 scientific_name uncultured Alistipes sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543636 SAMEA112433326 33959 Lactobacillus johnsonii ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433326 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:48:57Z INSDC last update 2023-02-03T00:48:57Z INSDC status public Submitter Id MGBC163212 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.96 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474070 sample name MGBC163212 scientific_name Lactobacillus johnsonii sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543637 SAMEA112433327 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433327 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:48:57Z INSDC last update 2023-02-03T00:48:57Z INSDC status public Submitter Id MGBC163213 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.73 completeness software CheckM contamination score 0.86 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474070 sample name MGBC163213 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543638 SAMEA112433328 2321402 uncultured Eggerthellaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433328 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:48:57Z INSDC last update 2023-02-03T00:48:57Z INSDC status public Submitter Id MGBC163214 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.58 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474070 sample name MGBC163214 scientific_name uncultured Eggerthellaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543639 SAMEA112433329 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433329 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:48:57Z INSDC last update 2023-02-03T00:48:57Z INSDC status public Submitter Id MGBC163215 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.12 completeness software CheckM contamination score 1.53 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474070 sample name MGBC163215 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543640 SAMEA112433330 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433330 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:48:57Z INSDC last update 2023-02-03T00:48:57Z INSDC status public Submitter Id MGBC163216 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.98 completeness software CheckM contamination score 1.83 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474070 sample name MGBC163216 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543641 SAMEA112433331 239935 Akkermansia muciniphila ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433331 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:48:57Z INSDC last update 2023-02-03T00:48:57Z INSDC status public Submitter Id MGBC163217 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.95 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474070 sample name MGBC163217 scientific_name Akkermansia muciniphila sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543642 SAMEA112433332 172733 uncultured Eubacteriales bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433332 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:48:57Z INSDC last update 2023-02-03T00:48:57Z INSDC status public Submitter Id MGBC163218 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.31 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474070 sample name MGBC163218 scientific_name uncultured Eubacteriales bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543643 SAMEA112433333 446043 uncultured Lachnospira sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433333 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:04Z INSDC last update 2023-02-03T00:49:04Z INSDC status public Submitter Id MGBC163219 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.29 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474070 sample name MGBC163219 scientific_name uncultured Lachnospira sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543644 SAMEA112433334 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433334 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:04Z INSDC last update 2023-02-03T00:49:04Z INSDC status public Submitter Id MGBC163220 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.16 completeness software CheckM contamination score 0.12 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474070 sample name MGBC163220 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543645 SAMEA112433335 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433335 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:04Z INSDC last update 2023-02-03T00:49:04Z INSDC status public Submitter Id MGBC163221 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.85 completeness software CheckM contamination score 0.75 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474070 sample name MGBC163221 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543646 SAMEA112433336 707003 uncultured Oscillospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433336 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:04Z INSDC last update 2023-02-03T00:49:04Z INSDC status public Submitter Id MGBC163222 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.64 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474070 sample name MGBC163222 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543647 SAMEA112433337 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433337 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:04Z INSDC last update 2023-02-03T00:49:04Z INSDC status public Submitter Id MGBC163223 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.41 completeness software CheckM contamination score 0.38 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474070 sample name MGBC163223 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543648 SAMEA112433338 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433338 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:04Z INSDC last update 2023-02-03T00:49:04Z INSDC status public Submitter Id MGBC163224 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 94.18 completeness software CheckM contamination score 3.58 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474070 sample name MGBC163224 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543649 SAMEA112433339 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433339 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:04Z INSDC last update 2023-02-03T00:49:04Z INSDC status public Submitter Id MGBC163225 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 93.10 completeness software CheckM contamination score 1.52 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474070 sample name MGBC163225 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543650 SAMEA112433340 297316 uncultured Turicibacter sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433340 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:04Z INSDC last update 2023-02-03T00:49:04Z INSDC status public Submitter Id MGBC163226 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 91.60 completeness software CheckM contamination score 2.58 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474070 sample name MGBC163226 scientific_name uncultured Turicibacter sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543651 SAMEA112433341 224209 uncultured Bacilli bacterium ENA-FIRST-PUBLIC 2023-02-03T00:49:11Z ENA-LAST-UPDATE 2023-02-03T00:49:11Z External Id SAMEA112433341 INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:11Z INSDC last update 2023-02-03T00:49:11Z INSDC status public Submitter Id MGBC163227 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 91.57 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474070 sample name MGBC163227 scientific_name uncultured Bacilli bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543652 SAMEA112433342 2321402 uncultured Eggerthellaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433342 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:11Z INSDC last update 2023-02-03T00:49:11Z INSDC status public Submitter Id MGBC163228 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 89.41 completeness software CheckM contamination score 1.08 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474070 sample name MGBC163228 scientific_name uncultured Eggerthellaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543653 SAMEA112433343 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433343 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:11Z INSDC last update 2023-02-03T00:49:11Z INSDC status public Submitter Id MGBC163229 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 86.13 completeness software CheckM contamination score 2.43 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474070 sample name MGBC163229 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543654 SAMEA112433344 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433344 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:11Z INSDC last update 2023-02-03T00:49:11Z INSDC status public Submitter Id MGBC163230 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 84.23 completeness software CheckM contamination score 4.02 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474070 sample name MGBC163230 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543655 SAMEA112433345 293430 uncultured Ureaplasma sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433345 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:11Z INSDC last update 2023-02-03T00:49:11Z INSDC status public Submitter Id MGBC163231 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 83.48 completeness software CheckM contamination score 2.05 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474070 sample name MGBC163231 scientific_name uncultured Ureaplasma sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543656 SAMEA112433346 2676055 uncultured Schaedlerella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433346 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:11Z INSDC last update 2023-02-03T00:49:11Z INSDC status public Submitter Id MGBC163232 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 83.43 completeness software CheckM contamination score 2.05 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474070 sample name MGBC163232 scientific_name uncultured Schaedlerella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543657 SAMEA112433347 244328 uncultured Clostridia bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433347 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:11Z INSDC last update 2023-02-03T00:49:11Z INSDC status public Submitter Id MGBC163233 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 81.03 completeness software CheckM contamination score 3.58 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474070 sample name MGBC163233 scientific_name uncultured Clostridia bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543658 SAMEA112433348 1671927 uncultured Acetatifactor sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433348 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:11Z INSDC last update 2023-02-03T00:49:11Z INSDC status public Submitter Id MGBC163234 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 77.97 completeness software CheckM contamination score 2.40 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474070 sample name MGBC163234 scientific_name uncultured Acetatifactor sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543659 SAMEA112433349 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433349 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:18Z INSDC last update 2023-02-03T00:49:18Z INSDC status public Submitter Id MGBC163235 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 75.88 completeness software CheckM contamination score 3.69 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474070 sample name MGBC163235 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543660 SAMEA112433350 2768039 uncultured Duncaniella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433350 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:18Z INSDC last update 2023-02-03T00:49:18Z INSDC status public Submitter Id MGBC163236 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 72.83 completeness software CheckM contamination score 1.13 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474070 sample name MGBC163236 scientific_name uncultured Duncaniella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543661 SAMEA112433351 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433351 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:18Z INSDC last update 2023-02-03T00:49:18Z INSDC status public Submitter Id MGBC163237 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 71.66 completeness software CheckM contamination score 2.61 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474070 sample name MGBC163237 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543662 SAMEA112433352 2768039 uncultured Duncaniella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433352 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:18Z INSDC last update 2023-02-03T00:49:18Z INSDC status public Submitter Id MGBC163238 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 69.81 completeness software CheckM contamination score 0.38 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474070 sample name MGBC163238 scientific_name uncultured Duncaniella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543663 SAMEA112433353 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433353 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:18Z INSDC last update 2023-02-03T00:49:18Z INSDC status public Submitter Id MGBC163239 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 59.58 completeness software CheckM contamination score 0.68 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474070 sample name MGBC163239 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543664 SAMEA112433354 1751881 uncultured Hungatella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433354 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:18Z INSDC last update 2023-02-03T00:49:18Z INSDC status public Submitter Id MGBC163240 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 58.03 completeness software CheckM contamination score 1.26 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474070 sample name MGBC163240 scientific_name uncultured Hungatella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543665 SAMEA112433355 487175 Parasutterella excrementihominis ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433355 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:18Z INSDC last update 2023-02-03T00:49:18Z INSDC status public Submitter Id MGBC163241 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 100 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474069 sample name MGBC163241 scientific_name Parasutterella excrementihominis sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543666 SAMEA112433356 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433356 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:18Z INSDC last update 2023-02-03T00:49:18Z INSDC status public Submitter Id MGBC163242 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.41 completeness software CheckM contamination score 1.51 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474069 sample name MGBC163242 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543667 SAMEA112433357 2321400 uncultured Atopobiaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433357 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:26Z INSDC last update 2023-02-03T00:49:26Z INSDC status public Submitter Id MGBC163243 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.19 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474069 sample name MGBC163243 scientific_name uncultured Atopobiaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543668 SAMEA112433358 2768039 uncultured Duncaniella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433358 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:26Z INSDC last update 2023-02-03T00:49:26Z INSDC status public Submitter Id MGBC163244 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.05 completeness software CheckM contamination score 1.51 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474069 sample name MGBC163244 scientific_name uncultured Duncaniella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543669 SAMEA112433359 538949 uncultured Alistipes sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433359 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:26Z INSDC last update 2023-02-03T00:49:26Z INSDC status public Submitter Id MGBC163245 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.03 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474069 sample name MGBC163245 scientific_name uncultured Alistipes sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543670 SAMEA112433360 2768039 uncultured Duncaniella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433360 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:26Z INSDC last update 2023-02-03T00:49:26Z INSDC status public Submitter Id MGBC163246 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.01 completeness software CheckM contamination score 0.38 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474069 sample name MGBC163246 scientific_name uncultured Duncaniella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543671 SAMEA112433361 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433361 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:26Z INSDC last update 2023-02-03T00:49:26Z INSDC status public Submitter Id MGBC163247 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.73 completeness software CheckM contamination score 1.26 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474069 sample name MGBC163247 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543672 SAMEA112433362 2768039 uncultured Duncaniella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433362 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:26Z INSDC last update 2023-02-03T00:49:26Z INSDC status public Submitter Id MGBC163248 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.67 completeness software CheckM contamination score 0.88 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474069 sample name MGBC163248 scientific_name uncultured Duncaniella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543673 SAMEA112433363 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433363 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:26Z INSDC last update 2023-02-03T00:49:26Z INSDC status public Submitter Id MGBC163249 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.67 completeness software CheckM contamination score 0.88 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474069 sample name MGBC163249 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543674 SAMEA112433364 818 Bacteroides thetaiotaomicron ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433364 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:26Z INSDC last update 2023-02-03T00:49:26Z INSDC status public Submitter Id MGBC163250 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.09 completeness software CheckM contamination score 0.61 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474069 sample name MGBC163250 scientific_name Bacteroides thetaiotaomicron sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543675 SAMEA112433365 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433365 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:33Z INSDC last update 2023-02-03T00:49:33Z INSDC status public Submitter Id MGBC163251 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.91 completeness software CheckM contamination score 1.44 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474069 sample name MGBC163251 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543676 SAMEA112433366 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433366 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:33Z INSDC last update 2023-02-03T00:49:33Z INSDC status public Submitter Id MGBC163252 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.90 completeness software CheckM contamination score 0.38 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474069 sample name MGBC163252 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543677 SAMEA112433367 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433367 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:33Z INSDC last update 2023-02-03T00:49:33Z INSDC status public Submitter Id MGBC163253 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.52 completeness software CheckM contamination score 0.12 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474069 sample name MGBC163253 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543678 SAMEA112433368 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433368 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:33Z INSDC last update 2023-02-03T00:49:33Z INSDC status public Submitter Id MGBC163254 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.15 completeness software CheckM contamination score 1.92 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474069 sample name MGBC163254 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543679 SAMEA112433369 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433369 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:33Z INSDC last update 2023-02-03T00:49:33Z INSDC status public Submitter Id MGBC163255 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.85 completeness software CheckM contamination score 0.75 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474069 sample name MGBC163255 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543680 SAMEA112433370 172733 uncultured Eubacteriales bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433370 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:33Z INSDC last update 2023-02-03T00:49:33Z INSDC status public Submitter Id MGBC163256 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.64 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474069 sample name MGBC163256 scientific_name uncultured Eubacteriales bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543681 SAMEA112433371 707003 uncultured Oscillospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433371 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:33Z INSDC last update 2023-02-03T00:49:33Z INSDC status public Submitter Id MGBC163257 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.64 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474069 sample name MGBC163257 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543682 SAMEA112433372 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433372 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:33Z INSDC last update 2023-02-03T00:49:33Z INSDC status public Submitter Id MGBC163258 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.55 completeness software CheckM contamination score 2.09 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474069 sample name MGBC163258 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543683 SAMEA112433373 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433373 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:40Z INSDC last update 2023-02-03T00:49:40Z INSDC status public Submitter Id MGBC163259 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.03 completeness software CheckM contamination score 1.03 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474069 sample name MGBC163259 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543684 SAMEA112433374 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433374 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:40Z INSDC last update 2023-02-03T00:49:40Z INSDC status public Submitter Id MGBC163260 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 95.83 completeness software CheckM contamination score 1.91 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474069 sample name MGBC163260 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543685 SAMEA112433375 165185 uncultured Eubacterium sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433375 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:40Z INSDC last update 2023-02-03T00:49:40Z INSDC status public Submitter Id MGBC163261 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 95.19 completeness software CheckM contamination score 1.04 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474069 sample name MGBC163261 scientific_name uncultured Eubacterium sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543686 SAMEA112433376 1796620 Acutalibacter muris ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433376 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:40Z INSDC last update 2023-02-03T00:49:40Z INSDC status public Submitter Id MGBC163262 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 94.96 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474069 sample name MGBC163262 scientific_name Acutalibacter muris sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543687 SAMEA112433377 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433377 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:40Z INSDC last update 2023-02-03T00:49:40Z INSDC status public Submitter Id MGBC163263 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 93.77 completeness software CheckM contamination score 3.38 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474069 sample name MGBC163263 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543688 SAMEA112433378 707003 uncultured Oscillospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433378 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:40Z INSDC last update 2023-02-03T00:49:40Z INSDC status public Submitter Id MGBC163264 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 93.50 completeness software CheckM contamination score 1.36 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474069 sample name MGBC163264 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543689 SAMEA112433379 165185 uncultured Eubacterium sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433379 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:40Z INSDC last update 2023-02-03T00:49:40Z INSDC status public Submitter Id MGBC163265 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 93.28 completeness software CheckM contamination score 3.52 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474069 sample name MGBC163265 scientific_name uncultured Eubacterium sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543690 SAMEA112433380 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433380 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:40Z INSDC last update 2023-02-03T00:49:40Z INSDC status public Submitter Id MGBC163266 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 92.39 completeness software CheckM contamination score 1.68 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474069 sample name MGBC163266 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543691 SAMEA112433381 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433381 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:46Z INSDC last update 2023-02-03T00:49:46Z INSDC status public Submitter Id MGBC163267 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 91.88 completeness software CheckM contamination score 0.85 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474069 sample name MGBC163267 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543692 SAMEA112433382 286138 uncultured Dorea sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433382 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:47Z INSDC last update 2023-02-03T00:49:47Z INSDC status public Submitter Id MGBC163268 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 91.56 completeness software CheckM contamination score 1.32 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474069 sample name MGBC163268 scientific_name uncultured Dorea sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543693 SAMEA112433383 905011 uncultured Anaerotruncus sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433383 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:47Z INSDC last update 2023-02-03T00:49:47Z INSDC status public Submitter Id MGBC163269 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 91.09 completeness software CheckM contamination score 1.68 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474069 sample name MGBC163269 scientific_name uncultured Anaerotruncus sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543694 SAMEA112433384 2676055 uncultured Schaedlerella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433384 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:47Z INSDC last update 2023-02-03T00:49:47Z INSDC status public Submitter Id MGBC163270 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 89.80 completeness software CheckM contamination score 2.69 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474069 sample name MGBC163270 scientific_name uncultured Schaedlerella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543695 SAMEA112433385 1751881 uncultured Hungatella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433385 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:47Z INSDC last update 2023-02-03T00:49:47Z INSDC status public Submitter Id MGBC163271 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 89.54 completeness software CheckM contamination score 0.84 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474069 sample name MGBC163271 scientific_name uncultured Hungatella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543696 SAMEA112433386 239935 Akkermansia muciniphila ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433386 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:47Z INSDC last update 2023-02-03T00:49:47Z INSDC status public Submitter Id MGBC163272 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 88.49 completeness software CheckM contamination score 1.70 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474069 sample name MGBC163272 scientific_name Akkermansia muciniphila sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543697 SAMEA112433387 2054177 Christensenellaceae bacterium assembly software metaSPAdes_v3.10.1 broad-scale environmental context mouse gut collection date not provided sample derived from SRR12474069 geographic location (longitude) not provided DD binning parameters default parameters, kmer: 4 contamination score 1.24 % ENA-FIRST-PUBLIC 2023-02-03T00:49:47Z ENA-LAST-UPDATE 2023-02-03T00:49:47Z completeness software CheckM geographic location (country and/or sea) USA binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) organism Candidatus Borkfalkiaceae bacterium assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics taxonomic identity marker multi-marker approach completeness score 88.44 % environmental medium Distal colon geographic location (latitude) not provided DD scientific_name Candidatus Borkfalkiaceae bacterium common name investigation type metagenome-assembled genome local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sequencing method Illumina isolation_source Distal colon ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 ERS14543698 SAMEA112433388 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433388 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:47Z INSDC last update 2023-02-03T00:49:47Z INSDC status public Submitter Id MGBC163274 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 88.26 completeness software CheckM contamination score 2.30 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474069 sample name MGBC163274 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543699 SAMEA112433389 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433389 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:54Z INSDC last update 2023-02-03T00:49:54Z INSDC status public Submitter Id MGBC163275 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 87.50 completeness software CheckM contamination score 1.35 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474069 sample name MGBC163275 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543700 SAMEA112433390 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433390 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:54Z INSDC last update 2023-02-03T00:49:54Z INSDC status public Submitter Id MGBC163276 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 86.44 completeness software CheckM contamination score 1.08 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474069 sample name MGBC163276 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543701 SAMEA112433391 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433391 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:54Z INSDC last update 2023-02-03T00:49:54Z INSDC status public Submitter Id MGBC163277 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 84.95 completeness software CheckM contamination score 1.85 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474069 sample name MGBC163277 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543702 SAMEA112433392 331630 uncultured Erysipelotrichaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433392 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:54Z INSDC last update 2023-02-03T00:49:54Z INSDC status public Submitter Id MGBC163278 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 84.93 completeness software CheckM contamination score 2.20 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474069 sample name MGBC163278 scientific_name uncultured Erysipelotrichaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543703 SAMEA112433393 286138 uncultured Dorea sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433393 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:54Z INSDC last update 2023-02-03T00:49:54Z INSDC status public Submitter Id MGBC163279 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 84.90 completeness software CheckM contamination score 0.63 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474069 sample name MGBC163279 scientific_name uncultured Dorea sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543704 SAMEA112433394 33959 Lactobacillus johnsonii ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433394 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:54Z INSDC last update 2023-02-03T00:49:54Z INSDC status public Submitter Id MGBC163280 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 84.39 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474069 sample name MGBC163280 scientific_name Lactobacillus johnsonii sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543705 SAMEA112433395 331630 uncultured Erysipelotrichaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433395 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:54Z INSDC last update 2023-02-03T00:49:54Z INSDC status public Submitter Id MGBC163281 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 83.96 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474069 sample name MGBC163281 scientific_name uncultured Erysipelotrichaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543706 SAMEA112433396 876091 uncultured Oscillibacter sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433396 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:54Z INSDC last update 2023-02-03T00:49:54Z INSDC status public Submitter Id MGBC163282 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 83.08 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474069 sample name MGBC163282 scientific_name uncultured Oscillibacter sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543707 SAMEA112433397 331630 uncultured Erysipelotrichaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433397 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:01Z INSDC last update 2023-02-03T00:50:01Z INSDC status public Submitter Id MGBC163283 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 82.45 completeness software CheckM contamination score 2.20 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474069 sample name MGBC163283 scientific_name uncultured Erysipelotrichaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543708 SAMEA112433398 344338 uncultured Bacillota bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433398 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:01Z INSDC last update 2023-02-03T00:50:01Z INSDC status public Submitter Id MGBC163284 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 82.32 completeness software CheckM contamination score 3.02 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474069 sample name MGBC163284 scientific_name uncultured Firmicutes bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543709 SAMEA112433399 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433399 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:01Z INSDC last update 2023-02-03T00:50:01Z INSDC status public Submitter Id MGBC163285 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 81.32 completeness software CheckM contamination score 2.54 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474069 sample name MGBC163285 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543710 SAMEA112433400 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433400 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:01Z INSDC last update 2023-02-03T00:50:01Z INSDC status public Submitter Id MGBC163286 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 79.20 completeness software CheckM contamination score 1.93 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474069 sample name MGBC163286 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543711 SAMEA112433401 286138 uncultured Dorea sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433401 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:01Z INSDC last update 2023-02-03T00:50:01Z INSDC status public Submitter Id MGBC163287 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 74.98 completeness software CheckM contamination score 4.78 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474069 sample name MGBC163287 scientific_name uncultured Dorea sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543712 SAMEA112433402 1671927 uncultured Acetatifactor sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433402 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:01Z INSDC last update 2023-02-03T00:50:01Z INSDC status public Submitter Id MGBC163288 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 73.07 completeness software CheckM contamination score 2.78 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474069 sample name MGBC163288 scientific_name uncultured Acetatifactor sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543713 SAMEA112433403 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433403 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:01Z INSDC last update 2023-02-03T00:50:01Z INSDC status public Submitter Id MGBC163289 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 68.24 completeness software CheckM contamination score 2.87 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474069 sample name MGBC163289 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543714 SAMEA112433404 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03T00:50:01Z ENA-LAST-UPDATE 2023-02-03T00:50:01Z External Id SAMEA112433404 INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:01Z INSDC last update 2023-02-03T00:50:01Z INSDC status public Submitter Id MGBC163290 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 65.58 completeness software CheckM contamination score 1.69 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474069 sample name MGBC163290 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543715 SAMEA112433405 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433405 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:09Z INSDC last update 2023-02-03T00:50:09Z INSDC status public Submitter Id MGBC163291 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 62.48 completeness software CheckM contamination score 0.57 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474069 sample name MGBC163291 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543716 SAMEA112433406 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433406 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:09Z INSDC last update 2023-02-03T00:50:09Z INSDC status public Submitter Id MGBC163292 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 61.18 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474069 sample name MGBC163292 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543717 SAMEA112433407 707003 uncultured Oscillospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433407 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:09Z INSDC last update 2023-02-03T00:50:09Z INSDC status public Submitter Id MGBC163293 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 58.24 completeness software CheckM contamination score 1.07 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474069 sample name MGBC163293 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543718 SAMEA112433408 707003 uncultured Oscillospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433408 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:09Z INSDC last update 2023-02-03T00:50:09Z INSDC status public Submitter Id MGBC163294 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 56.37 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474069 sample name MGBC163294 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543719 SAMEA112433409 1690 Bifidobacterium pseudolongum subsp. globosum ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433409 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:09Z INSDC last update 2023-02-03T00:50:09Z INSDC status public Submitter Id MGBC163295 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.77 completeness software CheckM contamination score 0.44 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474082 sample name MGBC163295 scientific_name Bifidobacterium pseudolongum subsp. globosum sequencing method Illumina taxonomic identity marker multi-marker approach sub_species globosum ERS14543720 SAMEA112433410 2768039 uncultured Duncaniella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433410 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:09Z INSDC last update 2023-02-03T00:50:09Z INSDC status public Submitter Id MGBC163296 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.43 completeness software CheckM contamination score 0.88 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474082 sample name MGBC163296 scientific_name uncultured Duncaniella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543721 SAMEA112433411 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433411 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:09Z INSDC last update 2023-02-03T00:50:09Z INSDC status public Submitter Id MGBC163297 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.42 completeness software CheckM contamination score 0.57 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474082 sample name MGBC163297 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543722 SAMEA112433412 2768039 uncultured Duncaniella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433412 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:09Z INSDC last update 2023-02-03T00:50:09Z INSDC status public Submitter Id MGBC163298 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.41 completeness software CheckM contamination score 0.38 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474082 sample name MGBC163298 scientific_name uncultured Duncaniella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543723 SAMEA112433413 487175 Parasutterella excrementihominis ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433413 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:16Z INSDC last update 2023-02-03T00:50:16Z INSDC status public Submitter Id MGBC163299 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.36 completeness software CheckM contamination score 1.34 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474082 sample name MGBC163299 scientific_name Parasutterella excrementihominis sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543724 SAMEA112433414 2321400 uncultured Atopobiaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433414 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:16Z INSDC last update 2023-02-03T00:50:16Z INSDC status public Submitter Id MGBC163300 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.19 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474082 sample name MGBC163300 scientific_name uncultured Atopobiaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543725 SAMEA112433415 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433415 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:16Z INSDC last update 2023-02-03T00:50:16Z INSDC status public Submitter Id MGBC163301 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.05 completeness software CheckM contamination score 0.88 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474082 sample name MGBC163301 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543726 SAMEA112433416 538949 uncultured Alistipes sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433416 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:16Z INSDC last update 2023-02-03T00:50:16Z INSDC status public Submitter Id MGBC163302 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.03 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474082 sample name MGBC163302 scientific_name uncultured Alistipes sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543727 SAMEA112433417 33959 Lactobacillus johnsonii ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433417 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:16Z INSDC last update 2023-02-03T00:50:16Z INSDC status public Submitter Id MGBC163304 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.96 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474082 sample name MGBC163304 scientific_name Lactobacillus johnsonii sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543728 SAMEA112433418 446043 uncultured Lachnospira sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433418 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:16Z INSDC last update 2023-02-03T00:50:16Z INSDC status public Submitter Id MGBC163305 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.65 completeness software CheckM contamination score 0.02 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474082 sample name MGBC163305 scientific_name uncultured Lachnospira sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543729 SAMEA112433419 2321402 uncultured Eggerthellaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433419 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:16Z INSDC last update 2023-02-03T00:50:16Z INSDC status public Submitter Id MGBC163306 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.38 completeness software CheckM contamination score 1.59 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474082 sample name MGBC163306 scientific_name uncultured Eggerthellaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543730 SAMEA112433420 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433420 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:16Z INSDC last update 2023-02-03T00:50:16Z INSDC status public Submitter Id MGBC163307 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.22 completeness software CheckM contamination score 1.25 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474082 sample name MGBC163307 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543731 SAMEA112433421 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433421 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:24Z INSDC last update 2023-02-03T00:50:24Z INSDC status public Submitter Id MGBC163308 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.91 completeness software CheckM contamination score 1.41 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474082 sample name MGBC163308 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543732 SAMEA112433422 239935 Akkermansia muciniphila ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433422 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:24Z INSDC last update 2023-02-03T00:50:24Z INSDC status public Submitter Id MGBC163309 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.90 completeness software CheckM contamination score 1.13 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474082 sample name MGBC163309 scientific_name Akkermansia muciniphila sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543733 SAMEA112433423 818 Bacteroides thetaiotaomicron ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433423 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:24Z INSDC last update 2023-02-03T00:50:24Z INSDC status public Submitter Id MGBC163310 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.83 completeness software CheckM contamination score 1.86 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474082 sample name MGBC163310 scientific_name Bacteroides thetaiotaomicron sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543734 SAMEA112433424 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433424 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:24Z INSDC last update 2023-02-03T00:50:24Z INSDC status public Submitter Id MGBC163311 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.70 completeness software CheckM contamination score 2.14 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474082 sample name MGBC163311 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543735 SAMEA112433425 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433425 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:24Z INSDC last update 2023-02-03T00:50:24Z INSDC status public Submitter Id MGBC163312 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.62 completeness software CheckM contamination score 1.20 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474082 sample name MGBC163312 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543736 SAMEA112433426 2321402 uncultured Eggerthellaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433426 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:24Z INSDC last update 2023-02-03T00:50:24Z INSDC status public Submitter Id MGBC163313 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.59 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474082 sample name MGBC163313 scientific_name uncultured Eggerthellaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543737 SAMEA112433427 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433427 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:24Z INSDC last update 2023-02-03T00:50:24Z INSDC status public Submitter Id MGBC163314 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.54 completeness software CheckM contamination score 0.12 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474082 sample name MGBC163314 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543738 SAMEA112433428 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433428 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:24Z INSDC last update 2023-02-03T00:50:24Z INSDC status public Submitter Id MGBC163315 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.52 completeness software CheckM contamination score 1.89 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474082 sample name MGBC163315 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543739 SAMEA112433429 172733 uncultured Eubacteriales bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433429 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:31Z INSDC last update 2023-02-03T00:50:31Z INSDC status public Submitter Id MGBC163316 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.31 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474082 sample name MGBC163316 scientific_name uncultured Eubacteriales bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543740 SAMEA112433430 1796620 Acutalibacter muris ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433430 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:31Z INSDC last update 2023-02-03T00:50:31Z INSDC status public Submitter Id MGBC163317 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.95 completeness software CheckM contamination score 0.78 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474082 sample name MGBC163317 scientific_name Acutalibacter muris sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543741 SAMEA112433431 707003 uncultured Oscillospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433431 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:31Z INSDC last update 2023-02-03T00:50:31Z INSDC status public Submitter Id MGBC163318 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.64 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474082 sample name MGBC163318 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543742 SAMEA112433432 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433432 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:31Z INSDC last update 2023-02-03T00:50:31Z INSDC status public Submitter Id MGBC163319 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.47 completeness software CheckM contamination score 0.38 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474082 sample name MGBC163319 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543743 SAMEA112433433 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433433 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:31Z INSDC last update 2023-02-03T00:50:31Z INSDC status public Submitter Id MGBC163320 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.07 completeness software CheckM contamination score 0.64 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474082 sample name MGBC163320 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543744 SAMEA112433434 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433434 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:31Z INSDC last update 2023-02-03T00:50:31Z INSDC status public Submitter Id MGBC163321 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 95.99 completeness software CheckM contamination score 3.38 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474082 sample name MGBC163321 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543745 SAMEA112433435 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433435 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:31Z INSDC last update 2023-02-03T00:50:31Z INSDC status public Submitter Id MGBC163322 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 95.94 completeness software CheckM contamination score 1.35 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474082 sample name MGBC163322 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543746 SAMEA112433436 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433436 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:31Z INSDC last update 2023-02-03T00:50:31Z INSDC status public Submitter Id MGBC163324 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 95.30 completeness software CheckM contamination score 2.57 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474082 sample name MGBC163324 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543747 SAMEA112433437 165185 uncultured Eubacterium sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433437 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:38Z INSDC last update 2023-02-03T00:50:38Z INSDC status public Submitter Id MGBC163325 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 94.52 completeness software CheckM contamination score 2.01 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474082 sample name MGBC163325 scientific_name uncultured Eubacterium sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543748 SAMEA112433438 1671927 uncultured Acetatifactor sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433438 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:38Z INSDC last update 2023-02-03T00:50:38Z INSDC status public Submitter Id MGBC163326 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 93.96 completeness software CheckM contamination score 3.02 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474082 sample name MGBC163326 scientific_name uncultured Acetatifactor sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543749 SAMEA112433439 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433439 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:38Z INSDC last update 2023-02-03T00:50:38Z INSDC status public Submitter Id MGBC163327 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 93.77 completeness software CheckM contamination score 0.75 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474082 sample name MGBC163327 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543750 SAMEA112433440 165185 uncultured Eubacterium sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433440 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:38Z INSDC last update 2023-02-03T00:50:38Z INSDC status public Submitter Id MGBC163328 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 93.75 completeness software CheckM contamination score 1.61 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474082 sample name MGBC163328 scientific_name uncultured Eubacterium sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543751 SAMEA112433441 244328 uncultured Clostridia bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433441 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:38Z INSDC last update 2023-02-03T00:50:38Z INSDC status public Submitter Id MGBC163330 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 92.61 completeness software CheckM contamination score 0.02 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474082 sample name MGBC163330 scientific_name uncultured Clostridia bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543752 SAMEA112433442 297316 uncultured Turicibacter sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433442 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:38Z INSDC last update 2023-02-03T00:50:38Z INSDC status public Submitter Id MGBC163331 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 91.60 completeness software CheckM contamination score 3.13 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474082 sample name MGBC163331 scientific_name uncultured Turicibacter sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543753 SAMEA112433443 293430 uncultured Ureaplasma sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433443 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:38Z INSDC last update 2023-02-03T00:50:38Z INSDC status public Submitter Id MGBC163332 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 91.55 completeness software CheckM contamination score 2.72 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474082 sample name MGBC163332 scientific_name uncultured Ureaplasma sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543754 SAMEA112433444 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433444 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:38Z INSDC last update 2023-02-03T00:50:38Z INSDC status public Submitter Id MGBC163333 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 91.50 completeness software CheckM contamination score 0.13 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474082 sample name MGBC163333 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543755 SAMEA112433445 2676055 uncultured Schaedlerella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433445 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:44Z INSDC last update 2023-02-03T00:50:44Z INSDC status public Submitter Id MGBC163334 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 91.37 completeness software CheckM contamination score 1.17 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474082 sample name MGBC163334 scientific_name uncultured Schaedlerella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543756 SAMEA112433446 707003 uncultured Oscillospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433446 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:44Z INSDC last update 2023-02-03T00:50:44Z INSDC status public Submitter Id MGBC163335 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 90.60 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474082 sample name MGBC163335 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543757 SAMEA112433447 1671927 uncultured Acetatifactor sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433447 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:44Z INSDC last update 2023-02-03T00:50:44Z INSDC status public Submitter Id MGBC163336 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 89.59 completeness software CheckM contamination score 3.98 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474082 sample name MGBC163336 scientific_name uncultured Acetatifactor sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543758 SAMEA112433448 707003 uncultured Oscillospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433448 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:44Z INSDC last update 2023-02-03T00:50:44Z INSDC status public Submitter Id MGBC163337 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 88.94 completeness software CheckM contamination score 1.40 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474082 sample name MGBC163337 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543759 SAMEA112433449 2054177 Christensenellaceae bacterium assembly software metaSPAdes_v3.10.1 broad-scale environmental context mouse gut collection date not provided sample derived from SRR12474082 geographic location (longitude) not provided DD binning parameters default parameters, kmer: 4 contamination score 0.83 % ENA-FIRST-PUBLIC 2023-02-03T00:50:44Z ENA-LAST-UPDATE 2023-02-03T00:50:44Z completeness software CheckM geographic location (country and/or sea) USA binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) organism Candidatus Borkfalkiaceae bacterium assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics taxonomic identity marker multi-marker approach completeness score 86.96 % environmental medium Proximal colon geographic location (latitude) not provided DD scientific_name Candidatus Borkfalkiaceae bacterium common name investigation type metagenome-assembled genome local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sequencing method Illumina isolation_source Proximal colon ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 ERS14543760 SAMEA112433450 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433450 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:44Z INSDC last update 2023-02-03T00:50:44Z INSDC status public Submitter Id MGBC163339 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 84.53 completeness software CheckM contamination score 1.66 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474082 sample name MGBC163339 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543761 SAMEA112433451 2768039 uncultured Duncaniella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433451 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:44Z INSDC last update 2023-02-03T00:50:44Z INSDC status public Submitter Id MGBC163340 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 84.52 completeness software CheckM contamination score 0.38 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474082 sample name MGBC163340 scientific_name uncultured Duncaniella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543762 SAMEA112433452 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433452 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:44Z INSDC last update 2023-02-03T00:50:44Z INSDC status public Submitter Id MGBC163341 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 81.03 completeness software CheckM contamination score 2.85 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474082 sample name MGBC163341 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543763 SAMEA112433453 707003 uncultured Oscillospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433453 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:48:57Z INSDC last update 2023-02-03T00:48:57Z INSDC status public Submitter Id MGBC163342 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 79.99 completeness software CheckM contamination score 2.26 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474082 sample name MGBC163342 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543764 SAMEA112433454 707003 uncultured Oscillospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433454 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:48:57Z INSDC last update 2023-02-03T00:48:57Z INSDC status public Submitter Id MGBC163343 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 76.72 completeness software CheckM contamination score 2.97 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474082 sample name MGBC163343 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543765 SAMEA112433455 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433455 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:48:57Z INSDC last update 2023-02-03T00:48:57Z INSDC status public Submitter Id MGBC163344 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 72.26 completeness software CheckM contamination score 0.38 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474082 sample name MGBC163344 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543766 SAMEA112433456 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433456 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:48:57Z INSDC last update 2023-02-03T00:48:57Z INSDC status public Submitter Id MGBC163345 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 69.44 completeness software CheckM contamination score 0.57 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474082 sample name MGBC163345 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543767 SAMEA112433457 905011 uncultured Anaerotruncus sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433457 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:48:57Z INSDC last update 2023-02-03T00:48:57Z INSDC status public Submitter Id MGBC163346 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 69.29 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474082 sample name MGBC163346 scientific_name uncultured Anaerotruncus sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543768 SAMEA112433458 1671927 uncultured Acetatifactor sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433458 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:48:57Z INSDC last update 2023-02-03T00:48:57Z INSDC status public Submitter Id MGBC163347 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 66.27 completeness software CheckM contamination score 2.05 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474082 sample name MGBC163347 scientific_name uncultured Acetatifactor sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543769 SAMEA112433459 344338 uncultured Bacillota bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433459 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:48:57Z INSDC last update 2023-02-03T00:48:57Z INSDC status public Submitter Id MGBC163348 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 65.55 completeness software CheckM contamination score 0.84 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474082 sample name MGBC163348 scientific_name uncultured Firmicutes bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543770 SAMEA112433460 765821 uncultured Blautia sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433460 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:48:57Z INSDC last update 2023-02-03T00:48:57Z INSDC status public Submitter Id MGBC163349 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 59.50 completeness software CheckM contamination score 1.90 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474082 sample name MGBC163349 scientific_name uncultured Blautia sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543771 SAMEA112433461 2676055 uncultured Schaedlerella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433461 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:04Z INSDC last update 2023-02-03T00:49:04Z INSDC status public Submitter Id MGBC163350 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 58.62 completeness software CheckM contamination score 1.72 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474082 sample name MGBC163350 scientific_name uncultured Schaedlerella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543772 SAMEA112433462 172733 uncultured Eubacteriales bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433462 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:04Z INSDC last update 2023-02-03T00:49:04Z INSDC status public Submitter Id MGBC163351 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 55.88 completeness software CheckM contamination score 0.67 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474082 sample name MGBC163351 scientific_name uncultured Eubacteriales bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543773 SAMEA112433463 487175 Parasutterella excrementihominis ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433463 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:04Z INSDC last update 2023-02-03T00:49:04Z INSDC status public Submitter Id MGBC163352 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.89 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474093 sample name MGBC163352 scientific_name Parasutterella excrementihominis sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543774 SAMEA112433464 1690 Bifidobacterium pseudolongum subsp. globosum ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433464 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:04Z INSDC last update 2023-02-03T00:49:04Z INSDC status public Submitter Id MGBC163353 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.77 completeness software CheckM contamination score 0.44 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474093 sample name MGBC163353 scientific_name Bifidobacterium pseudolongum subsp. globosum sequencing method Illumina taxonomic identity marker multi-marker approach sub_species globosum ERS14543775 SAMEA112433465 2321400 uncultured Atopobiaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433465 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:04Z INSDC last update 2023-02-03T00:49:04Z INSDC status public Submitter Id MGBC163354 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.19 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474093 sample name MGBC163354 scientific_name uncultured Atopobiaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543776 SAMEA112433466 2768039 uncultured Duncaniella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433466 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:04Z INSDC last update 2023-02-03T00:49:04Z INSDC status public Submitter Id MGBC163355 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.14 completeness software CheckM contamination score 0.38 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474093 sample name MGBC163355 scientific_name uncultured Duncaniella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543777 SAMEA112433467 538949 uncultured Alistipes sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433467 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:04Z INSDC last update 2023-02-03T00:49:04Z INSDC status public Submitter Id MGBC163356 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.03 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474093 sample name MGBC163356 scientific_name uncultured Alistipes sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543778 SAMEA112433468 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433468 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:04Z INSDC last update 2023-02-03T00:49:04Z INSDC status public Submitter Id MGBC163357 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.93 completeness software CheckM contamination score 0.65 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474093 sample name MGBC163357 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543779 SAMEA112433469 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433469 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:11Z INSDC last update 2023-02-03T00:49:11Z INSDC status public Submitter Id MGBC163358 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.73 completeness software CheckM contamination score 1.28 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474093 sample name MGBC163358 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543780 SAMEA112433470 2768039 uncultured Duncaniella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433470 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:11Z INSDC last update 2023-02-03T00:49:11Z INSDC status public Submitter Id MGBC163359 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.52 completeness software CheckM contamination score 0.75 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474093 sample name MGBC163359 scientific_name uncultured Duncaniella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543781 SAMEA112433471 239935 Akkermansia muciniphila ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433471 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:11Z INSDC last update 2023-02-03T00:49:11Z INSDC status public Submitter Id MGBC163360 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.95 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474093 sample name MGBC163360 scientific_name Akkermansia muciniphila sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543782 SAMEA112433472 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433472 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:11Z INSDC last update 2023-02-03T00:49:11Z INSDC status public Submitter Id MGBC163361 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.16 completeness software CheckM contamination score 0.38 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474093 sample name MGBC163361 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543783 SAMEA112433473 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433473 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:11Z INSDC last update 2023-02-03T00:49:11Z INSDC status public Submitter Id MGBC163362 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.12 completeness software CheckM contamination score 1.26 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474093 sample name MGBC163362 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543784 SAMEA112433474 818 Bacteroides thetaiotaomicron ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433474 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:11Z INSDC last update 2023-02-03T00:49:11Z INSDC status public Submitter Id MGBC163363 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.02 completeness software CheckM contamination score 0.24 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474093 sample name MGBC163363 scientific_name Bacteroides thetaiotaomicron sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543785 SAMEA112433475 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433475 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:11Z INSDC last update 2023-02-03T00:49:11Z INSDC status public Submitter Id MGBC163364 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.98 completeness software CheckM contamination score 2.49 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474093 sample name MGBC163364 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543786 SAMEA112433476 707003 uncultured Oscillospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433476 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:11Z INSDC last update 2023-02-03T00:49:11Z INSDC status public Submitter Id MGBC163365 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.64 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474093 sample name MGBC163365 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543787 SAMEA112433477 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433477 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:18Z INSDC last update 2023-02-03T00:49:18Z INSDC status public Submitter Id MGBC163366 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.62 completeness software CheckM contamination score 2.25 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474093 sample name MGBC163366 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543788 SAMEA112433478 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433478 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:18Z INSDC last update 2023-02-03T00:49:18Z INSDC status public Submitter Id MGBC163367 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.55 completeness software CheckM contamination score 1.15 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474093 sample name MGBC163367 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543789 SAMEA112433479 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433479 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:18Z INSDC last update 2023-02-03T00:49:18Z INSDC status public Submitter Id MGBC163368 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.36 completeness software CheckM contamination score 4.36 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474093 sample name MGBC163368 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543790 SAMEA112433480 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433480 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:18Z INSDC last update 2023-02-03T00:49:18Z INSDC status public Submitter Id MGBC163369 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 95.34 completeness software CheckM contamination score 3.58 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474093 sample name MGBC163369 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543791 SAMEA112433481 707003 uncultured Oscillospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433481 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:18Z INSDC last update 2023-02-03T00:49:18Z INSDC status public Submitter Id MGBC163370 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 95.30 completeness software CheckM contamination score 2.12 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474093 sample name MGBC163370 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543792 SAMEA112433482 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433482 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:18Z INSDC last update 2023-02-03T00:49:18Z INSDC status public Submitter Id MGBC163371 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 94.68 completeness software CheckM contamination score 2.97 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474093 sample name MGBC163371 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543793 SAMEA112433483 286138 uncultured Dorea sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433483 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:19Z INSDC last update 2023-02-03T00:49:19Z INSDC status public Submitter Id MGBC163372 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 94.63 completeness software CheckM contamination score 2.33 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474093 sample name MGBC163372 scientific_name uncultured Dorea sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543794 SAMEA112433484 286138 uncultured Dorea sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433484 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:19Z INSDC last update 2023-02-03T00:49:19Z INSDC status public Submitter Id MGBC163373 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 93.85 completeness software CheckM contamination score 0.58 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474093 sample name MGBC163373 scientific_name uncultured Dorea sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543795 SAMEA112433485 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433485 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:26Z INSDC last update 2023-02-03T00:49:26Z INSDC status public Submitter Id MGBC163374 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 93.24 completeness software CheckM contamination score 0.69 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474093 sample name MGBC163374 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543796 SAMEA112433486 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433486 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:26Z INSDC last update 2023-02-03T00:49:26Z INSDC status public Submitter Id MGBC163375 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 93.19 completeness software CheckM contamination score 1.81 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474093 sample name MGBC163375 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543797 SAMEA112433487 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433487 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:26Z INSDC last update 2023-02-03T00:49:26Z INSDC status public Submitter Id MGBC163376 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 93.19 completeness software CheckM contamination score 2.87 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474093 sample name MGBC163376 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543798 SAMEA112433488 172733 uncultured Eubacteriales bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433488 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:26Z INSDC last update 2023-02-03T00:49:26Z INSDC status public Submitter Id MGBC163377 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 92.33 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474093 sample name MGBC163377 scientific_name uncultured Eubacteriales bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543799 SAMEA112433489 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433489 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:26Z INSDC last update 2023-02-03T00:49:26Z INSDC status public Submitter Id MGBC163378 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 91.93 completeness software CheckM contamination score 1.08 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474093 sample name MGBC163378 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543800 SAMEA112433490 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433490 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:26Z INSDC last update 2023-02-03T00:49:26Z INSDC status public Submitter Id MGBC163379 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 91.54 completeness software CheckM contamination score 1.26 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474093 sample name MGBC163379 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543801 SAMEA112433491 2321402 uncultured Eggerthellaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433491 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:26Z INSDC last update 2023-02-03T00:49:26Z INSDC status public Submitter Id MGBC163380 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 91.12 completeness software CheckM contamination score 3.49 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474093 sample name MGBC163380 scientific_name uncultured Eggerthellaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543802 SAMEA112433492 1751881 uncultured Hungatella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433492 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:26Z INSDC last update 2023-02-03T00:49:26Z INSDC status public Submitter Id MGBC163381 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 91.08 completeness software CheckM contamination score 0.63 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474093 sample name MGBC163381 scientific_name uncultured Hungatella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543803 SAMEA112433493 905011 uncultured Anaerotruncus sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433493 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:33Z INSDC last update 2023-02-03T00:49:33Z INSDC status public Submitter Id MGBC163382 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 89.73 completeness software CheckM contamination score 1.45 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474093 sample name MGBC163382 scientific_name uncultured Anaerotruncus sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543804 SAMEA112433494 286138 uncultured Dorea sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433494 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:33Z INSDC last update 2023-02-03T00:49:33Z INSDC status public Submitter Id MGBC163383 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 89.47 completeness software CheckM contamination score 1.56 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474093 sample name MGBC163383 scientific_name uncultured Dorea sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543805 SAMEA112433495 2676055 uncultured Schaedlerella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433495 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:33Z INSDC last update 2023-02-03T00:49:33Z INSDC status public Submitter Id MGBC163384 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 88.46 completeness software CheckM contamination score 1.66 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474093 sample name MGBC163384 scientific_name uncultured Schaedlerella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543806 SAMEA112433496 2321402 uncultured Eggerthellaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433496 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:33Z INSDC last update 2023-02-03T00:49:33Z INSDC status public Submitter Id MGBC163385 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 88.29 completeness software CheckM contamination score 2.42 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474093 sample name MGBC163385 scientific_name uncultured Eggerthellaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543807 SAMEA112433497 2054177 Christensenellaceae bacterium assembly software metaSPAdes_v3.10.1 broad-scale environmental context mouse gut collection date not provided sample derived from SRR12474093 geographic location (longitude) not provided DD binning parameters default parameters, kmer: 4 contamination score 1.24 % ENA-FIRST-PUBLIC 2023-02-03T00:49:33Z ENA-LAST-UPDATE 2023-02-03T00:49:33Z completeness software CheckM geographic location (country and/or sea) USA binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) organism Candidatus Borkfalkiaceae bacterium assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics taxonomic identity marker multi-marker approach completeness score 86.74 % environmental medium Distal colon geographic location (latitude) not provided DD scientific_name Candidatus Borkfalkiaceae bacterium common name investigation type metagenome-assembled genome local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sequencing method Illumina isolation_source Distal colon ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 ERS14543808 SAMEA112433498 344338 uncultured Bacillota bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433498 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:33Z INSDC last update 2023-02-03T00:49:33Z INSDC status public Submitter Id MGBC163387 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 84.88 completeness software CheckM contamination score 1.02 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474093 sample name MGBC163387 scientific_name uncultured Firmicutes bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543809 SAMEA112433499 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433499 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:33Z INSDC last update 2023-02-03T00:49:33Z INSDC status public Submitter Id MGBC163388 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 84.88 completeness software CheckM contamination score 2.97 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474093 sample name MGBC163388 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543810 SAMEA112433500 33959 Lactobacillus johnsonii ENA-FIRST-PUBLIC 2023-02-03T00:49:33Z ENA-LAST-UPDATE 2023-02-03T00:49:33Z External Id SAMEA112433500 INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:33Z INSDC last update 2023-02-03T00:49:33Z INSDC status public Submitter Id MGBC163389 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 80.06 completeness software CheckM contamination score 1.84 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474093 sample name MGBC163389 scientific_name Lactobacillus johnsonii sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543811 SAMEA112433501 1598 Limosilactobacillus reuteri ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433501 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:40Z INSDC last update 2023-02-03T00:49:40Z INSDC status public Submitter Id MGBC163390 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 78.50 completeness software CheckM contamination score 2.36 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474093 sample name MGBC163390 scientific_name Limosilactobacillus reuteri sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543812 SAMEA112433502 172733 uncultured Eubacteriales bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433502 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:40Z INSDC last update 2023-02-03T00:49:40Z INSDC status public Submitter Id MGBC163391 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 77.12 completeness software CheckM contamination score 0.34 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474093 sample name MGBC163391 scientific_name uncultured Eubacteriales bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543813 SAMEA112433503 2163171 uncultured Kineothrix sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433503 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:40Z INSDC last update 2023-02-03T00:49:40Z INSDC status public Submitter Id MGBC163392 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 75.27 completeness software CheckM contamination score 0.86 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474093 sample name MGBC163392 scientific_name uncultured Kineothrix sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543814 SAMEA112433504 707003 uncultured Oscillospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433504 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:40Z INSDC last update 2023-02-03T00:49:40Z INSDC status public Submitter Id MGBC163393 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 74.05 completeness software CheckM contamination score 1.68 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474093 sample name MGBC163393 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543815 SAMEA112433505 2054177 Christensenellaceae bacterium assembly software metaSPAdes_v3.10.1 broad-scale environmental context mouse gut collection date not provided sample derived from SRR12474093 geographic location (longitude) not provided DD binning parameters default parameters, kmer: 4 contamination score 3.28 % ENA-FIRST-PUBLIC 2023-02-03T00:49:40Z ENA-LAST-UPDATE 2023-02-03T00:49:40Z completeness software CheckM geographic location (country and/or sea) USA binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) organism Candidatus Borkfalkiaceae bacterium assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics taxonomic identity marker multi-marker approach completeness score 73.77 % environmental medium Distal colon geographic location (latitude) not provided DD scientific_name Candidatus Borkfalkiaceae bacterium common name investigation type metagenome-assembled genome local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sequencing method Illumina isolation_source Distal colon ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 ERS14543816 SAMEA112433506 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433506 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:40Z INSDC last update 2023-02-03T00:49:40Z INSDC status public Submitter Id MGBC163395 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 71.13 completeness software CheckM contamination score 1.53 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474093 sample name MGBC163395 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543817 SAMEA112433507 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433507 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:40Z INSDC last update 2023-02-03T00:49:40Z INSDC status public Submitter Id MGBC163396 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 68.90 completeness software CheckM contamination score 0.38 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474093 sample name MGBC163396 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543818 SAMEA112433508 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433508 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:40Z INSDC last update 2023-02-03T00:49:40Z INSDC status public Submitter Id MGBC163397 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 68.43 completeness software CheckM contamination score 1.71 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474093 sample name MGBC163397 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543819 SAMEA112433509 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433509 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:47Z INSDC last update 2023-02-03T00:49:47Z INSDC status public Submitter Id MGBC163398 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 67.11 completeness software CheckM contamination score 2.56 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474093 sample name MGBC163398 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543820 SAMEA112433510 2768039 uncultured Duncaniella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433510 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:47Z INSDC last update 2023-02-03T00:49:47Z INSDC status public Submitter Id MGBC163399 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 63.77 completeness software CheckM contamination score 0.38 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474093 sample name MGBC163399 scientific_name uncultured Duncaniella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543821 SAMEA112433511 707003 uncultured Oscillospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433511 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:47Z INSDC last update 2023-02-03T00:49:47Z INSDC status public Submitter Id MGBC163400 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 63.53 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474093 sample name MGBC163400 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543822 SAMEA112433512 707003 uncultured Oscillospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433512 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:47Z INSDC last update 2023-02-03T00:49:47Z INSDC status public Submitter Id MGBC163401 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 60.26 completeness software CheckM contamination score 1.34 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474093 sample name MGBC163401 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543823 SAMEA112433513 707003 uncultured Oscillospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433513 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:47Z INSDC last update 2023-02-03T00:49:47Z INSDC status public Submitter Id MGBC163402 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 55.36 completeness software CheckM contamination score 0.67 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474093 sample name MGBC163402 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543824 SAMEA112433514 2321402 uncultured Eggerthellaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433514 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:47Z INSDC last update 2023-02-03T00:49:47Z INSDC status public Submitter Id MGBC163403 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 100 completeness software CheckM contamination score 3.02 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163403 scientific_name uncultured Eggerthellaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543825 SAMEA112433515 2321402 uncultured Eggerthellaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433515 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:47Z INSDC last update 2023-02-03T00:49:47Z INSDC status public Submitter Id MGBC163404 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 100 completeness software CheckM contamination score 0.81 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163404 scientific_name uncultured Eggerthellaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543826 SAMEA112433516 487175 Parasutterella excrementihominis ENA-FIRST-PUBLIC 2023-02-03T00:49:47Z ENA-LAST-UPDATE 2023-02-03T00:49:47Z External Id SAMEA112433516 INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:47Z INSDC last update 2023-02-03T00:49:47Z INSDC status public Submitter Id MGBC163405 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 100 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163405 scientific_name Parasutterella excrementihominis sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543827 SAMEA112433517 1690 Bifidobacterium pseudolongum subsp. globosum ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433517 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:54Z INSDC last update 2023-02-03T00:49:54Z INSDC status public Submitter Id MGBC163406 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.72 completeness software CheckM contamination score 0.53 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163406 scientific_name Bifidobacterium pseudolongum subsp. globosum sequencing method Illumina taxonomic identity marker multi-marker approach sub_species globosum ERS14543828 SAMEA112433518 2768039 uncultured Duncaniella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433518 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:54Z INSDC last update 2023-02-03T00:49:54Z INSDC status public Submitter Id MGBC163407 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.43 completeness software CheckM contamination score 0.38 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163407 scientific_name uncultured Duncaniella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543829 SAMEA112433519 818 Bacteroides thetaiotaomicron ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433519 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:54Z INSDC last update 2023-02-03T00:49:54Z INSDC status public Submitter Id MGBC163408 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.41 completeness software CheckM contamination score 0.59 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163408 scientific_name Bacteroides thetaiotaomicron sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543830 SAMEA112433520 2321400 uncultured Atopobiaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433520 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:54Z INSDC last update 2023-02-03T00:49:54Z INSDC status public Submitter Id MGBC163409 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.19 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163409 scientific_name uncultured Atopobiaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543831 SAMEA112433521 2768039 uncultured Duncaniella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433521 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:54Z INSDC last update 2023-02-03T00:49:54Z INSDC status public Submitter Id MGBC163410 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.05 completeness software CheckM contamination score 0.88 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163410 scientific_name uncultured Duncaniella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543832 SAMEA112433522 538949 uncultured Alistipes sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433522 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:54Z INSDC last update 2023-02-03T00:49:54Z INSDC status public Submitter Id MGBC163411 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.03 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163411 scientific_name uncultured Alistipes sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543833 SAMEA112433523 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433523 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:54Z INSDC last update 2023-02-03T00:49:54Z INSDC status public Submitter Id MGBC163412 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.85 completeness software CheckM contamination score 0.57 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163412 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543834 SAMEA112433524 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03T00:49:54Z ENA-LAST-UPDATE 2023-02-03T00:49:54Z External Id SAMEA112433524 INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:54Z INSDC last update 2023-02-03T00:49:54Z INSDC status public Submitter Id MGBC163413 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.73 completeness software CheckM contamination score 1.26 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163413 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543835 SAMEA112433525 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433525 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:01Z INSDC last update 2023-02-03T00:50:01Z INSDC status public Submitter Id MGBC163414 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.73 completeness software CheckM contamination score 0.63 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163414 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543836 SAMEA112433526 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433526 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:01Z INSDC last update 2023-02-03T00:50:01Z INSDC status public Submitter Id MGBC163415 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.41 completeness software CheckM contamination score 0.63 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163415 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543837 SAMEA112433527 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433527 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:01Z INSDC last update 2023-02-03T00:50:01Z INSDC status public Submitter Id MGBC163416 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.30 completeness software CheckM contamination score 0.38 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163416 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543838 SAMEA112433528 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433528 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:01Z INSDC last update 2023-02-03T00:50:01Z INSDC status public Submitter Id MGBC163417 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.10 completeness software CheckM contamination score 3.80 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163417 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543839 SAMEA112433529 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433529 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:01Z INSDC last update 2023-02-03T00:50:01Z INSDC status public Submitter Id MGBC163418 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.99 completeness software CheckM contamination score 2.57 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163418 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543840 SAMEA112433530 876091 uncultured Oscillibacter sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433530 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:01Z INSDC last update 2023-02-03T00:50:01Z INSDC status public Submitter Id MGBC163419 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.98 completeness software CheckM contamination score 0.34 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163419 scientific_name uncultured Oscillibacter sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543841 SAMEA112433531 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433531 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:01Z INSDC last update 2023-02-03T00:50:01Z INSDC status public Submitter Id MGBC163420 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.58 completeness software CheckM contamination score 2.87 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163420 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543842 SAMEA112433532 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433532 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:01Z INSDC last update 2023-02-03T00:50:01Z INSDC status public Submitter Id MGBC163422 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.58 completeness software CheckM contamination score 2.24 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163422 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543843 SAMEA112433533 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433533 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:09Z INSDC last update 2023-02-03T00:50:09Z INSDC status public Submitter Id MGBC163423 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.54 completeness software CheckM contamination score 0.12 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163423 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543844 SAMEA112433534 1926559 uncultured Emergencia sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433534 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:09Z INSDC last update 2023-02-03T00:50:09Z INSDC status public Submitter Id MGBC163424 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.51 completeness software CheckM contamination score 0.24 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163424 scientific_name uncultured Emergencia sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543845 SAMEA112433535 1757166 uncultured Ruminiclostridium sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433535 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:09Z INSDC last update 2023-02-03T00:50:09Z INSDC status public Submitter Id MGBC163425 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.09 completeness software CheckM contamination score 0.67 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163425 scientific_name uncultured Ruminiclostridium sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543846 SAMEA112433536 165185 uncultured Eubacterium sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433536 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:09Z INSDC last update 2023-02-03T00:50:09Z INSDC status public Submitter Id MGBC163426 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.96 completeness software CheckM contamination score 1.06 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163426 scientific_name uncultured Eubacterium sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543847 SAMEA112433537 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433537 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:09Z INSDC last update 2023-02-03T00:50:09Z INSDC status public Submitter Id MGBC163427 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.92 completeness software CheckM contamination score 4.02 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163427 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543848 SAMEA112433538 1751881 uncultured Hungatella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433538 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:09Z INSDC last update 2023-02-03T00:50:09Z INSDC status public Submitter Id MGBC163428 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.43 completeness software CheckM contamination score 2.69 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163428 scientific_name uncultured Hungatella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543849 SAMEA112433539 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433539 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:09Z INSDC last update 2023-02-03T00:50:09Z INSDC status public Submitter Id MGBC163429 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.04 completeness software CheckM contamination score 1.32 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163429 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543850 SAMEA112433540 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433540 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:09Z INSDC last update 2023-02-03T00:50:09Z INSDC status public Submitter Id MGBC163430 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 95.99 completeness software CheckM contamination score 3.38 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163430 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543851 SAMEA112433541 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433541 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:16Z INSDC last update 2023-02-03T00:50:16Z INSDC status public Submitter Id MGBC163431 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 95.74 completeness software CheckM contamination score 1.34 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163431 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543852 SAMEA112433542 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433542 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:16Z INSDC last update 2023-02-03T00:50:16Z INSDC status public Submitter Id MGBC163432 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 95.72 completeness software CheckM contamination score 0.38 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163432 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543853 SAMEA112433543 172733 uncultured Eubacteriales bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433543 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:17Z INSDC last update 2023-02-03T00:50:17Z INSDC status public Submitter Id MGBC163433 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 95.30 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163433 scientific_name uncultured Eubacteriales bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543854 SAMEA112433544 172733 uncultured Eubacteriales bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433544 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:17Z INSDC last update 2023-02-03T00:50:17Z INSDC status public Submitter Id MGBC163434 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 95.07 completeness software CheckM contamination score 2.01 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163434 scientific_name uncultured Eubacteriales bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543855 SAMEA112433545 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433545 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:17Z INSDC last update 2023-02-03T00:50:17Z INSDC status public Submitter Id MGBC163435 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 95.07 completeness software CheckM contamination score 3.02 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163435 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543856 SAMEA112433546 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433546 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:17Z INSDC last update 2023-02-03T00:50:17Z INSDC status public Submitter Id MGBC163436 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 95.03 completeness software CheckM contamination score 2.01 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163436 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543857 SAMEA112433547 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433547 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:17Z INSDC last update 2023-02-03T00:50:17Z INSDC status public Submitter Id MGBC163437 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 94.82 completeness software CheckM contamination score 1.11 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163437 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543858 SAMEA112433548 331630 uncultured Erysipelotrichaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433548 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:17Z INSDC last update 2023-02-03T00:50:17Z INSDC status public Submitter Id MGBC163438 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 94.33 completeness software CheckM contamination score 1.08 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163438 scientific_name uncultured Erysipelotrichaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543859 SAMEA112433549 2163171 uncultured Kineothrix sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433549 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:24Z INSDC last update 2023-02-03T00:50:24Z INSDC status public Submitter Id MGBC163439 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 94.25 completeness software CheckM contamination score 0.02 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163439 scientific_name uncultured Kineothrix sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543860 SAMEA112433550 165185 uncultured Eubacterium sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433550 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:24Z INSDC last update 2023-02-03T00:50:24Z INSDC status public Submitter Id MGBC163440 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 93.82 completeness software CheckM contamination score 2.40 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163440 scientific_name uncultured Eubacterium sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543861 SAMEA112433551 2676055 uncultured Schaedlerella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433551 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:24Z INSDC last update 2023-02-03T00:50:24Z INSDC status public Submitter Id MGBC163441 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 93.71 completeness software CheckM contamination score 0.88 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163441 scientific_name uncultured Schaedlerella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543862 SAMEA112433552 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433552 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:24Z INSDC last update 2023-02-03T00:50:24Z INSDC status public Submitter Id MGBC163442 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 93.70 completeness software CheckM contamination score 2.36 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163442 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543863 SAMEA112433553 286138 uncultured Dorea sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433553 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:24Z INSDC last update 2023-02-03T00:50:24Z INSDC status public Submitter Id MGBC163443 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 93.56 completeness software CheckM contamination score 1.46 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163443 scientific_name uncultured Dorea sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543864 SAMEA112433554 2054177 Christensenellaceae bacterium assembly software megahit_v1.1.1-2-g02102e1 broad-scale environmental context mouse gut collection date not provided sample derived from SRR12474076 geographic location (longitude) not provided DD binning parameters default parameters, kmer: 4 contamination score 0.46 % ENA-FIRST-PUBLIC 2023-02-03T00:50:24Z ENA-LAST-UPDATE 2023-02-03T00:50:24Z completeness software CheckM geographic location (country and/or sea) USA binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) organism Candidatus Borkfalkiaceae bacterium assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics taxonomic identity marker multi-marker approach completeness score 93.54 % environmental medium Proximal colon geographic location (latitude) not provided DD scientific_name Candidatus Borkfalkiaceae bacterium common name investigation type metagenome-assembled genome local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sequencing method Illumina isolation_source Proximal colon ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 ERS14543865 SAMEA112433555 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433555 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:24Z INSDC last update 2023-02-03T00:50:24Z INSDC status public Submitter Id MGBC163445 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 93.29 completeness software CheckM contamination score 1.30 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163445 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543866 SAMEA112433556 165185 uncultured Eubacterium sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433556 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:24Z INSDC last update 2023-02-03T00:50:24Z INSDC status public Submitter Id MGBC163446 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 93.28 completeness software CheckM contamination score 2.68 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163446 scientific_name uncultured Eubacterium sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543867 SAMEA112433557 875803 uncultured Adlercreutzia sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433557 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:31Z INSDC last update 2023-02-03T00:50:31Z INSDC status public Submitter Id MGBC163447 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 93.14 completeness software CheckM contamination score 0.56 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163447 scientific_name uncultured Adlercreutzia sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543868 SAMEA112433558 875803 uncultured Adlercreutzia sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433558 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:31Z INSDC last update 2023-02-03T00:50:31Z INSDC status public Submitter Id MGBC163449 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 91.75 completeness software CheckM contamination score 1.61 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163449 scientific_name uncultured Adlercreutzia sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543869 SAMEA112433559 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433559 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:31Z INSDC last update 2023-02-03T00:50:31Z INSDC status public Submitter Id MGBC163450 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 91.52 completeness software CheckM contamination score 0.95 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163450 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543870 SAMEA112433560 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433560 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:31Z INSDC last update 2023-02-03T00:50:31Z INSDC status public Submitter Id MGBC163451 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 91.50 completeness software CheckM contamination score 0.38 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163451 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543871 SAMEA112433561 286138 uncultured Dorea sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433561 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:31Z INSDC last update 2023-02-03T00:50:31Z INSDC status public Submitter Id MGBC163452 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 90.79 completeness software CheckM contamination score 1.07 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163452 scientific_name uncultured Dorea sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543872 SAMEA112433562 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433562 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:31Z INSDC last update 2023-02-03T00:50:31Z INSDC status public Submitter Id MGBC163453 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 88.77 completeness software CheckM contamination score 3.54 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163453 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543873 SAMEA112433563 286138 uncultured Dorea sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433563 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:31Z INSDC last update 2023-02-03T00:50:31Z INSDC status public Submitter Id MGBC163454 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 88.46 completeness software CheckM contamination score 2.34 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163454 scientific_name uncultured Dorea sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543874 SAMEA112433564 344338 uncultured Bacillota bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433564 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:31Z INSDC last update 2023-02-03T00:50:31Z INSDC status public Submitter Id MGBC163455 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 88.18 completeness software CheckM contamination score 1.36 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163455 scientific_name uncultured Firmicutes bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543875 SAMEA112433565 2768039 uncultured Duncaniella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433565 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:38Z INSDC last update 2023-02-03T00:50:38Z INSDC status public Submitter Id MGBC163456 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 86.79 completeness software CheckM contamination score 0.38 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163456 scientific_name uncultured Duncaniella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543876 SAMEA112433566 1671927 uncultured Acetatifactor sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433566 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:38Z INSDC last update 2023-02-03T00:50:38Z INSDC status public Submitter Id MGBC163457 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 85.57 completeness software CheckM contamination score 3.50 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163457 scientific_name uncultured Acetatifactor sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543877 SAMEA112433567 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433567 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:38Z INSDC last update 2023-02-03T00:50:38Z INSDC status public Submitter Id MGBC163458 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 83.48 completeness software CheckM contamination score 2.35 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163458 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543878 SAMEA112433568 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03T00:50:38Z ENA-LAST-UPDATE 2023-02-03T00:50:38Z External Id SAMEA112433568 INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:38Z INSDC last update 2023-02-03T00:50:38Z INSDC status public Submitter Id MGBC163459 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 83.31 completeness software CheckM contamination score 1.39 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163459 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543879 SAMEA112433569 172733 uncultured Eubacteriales bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433569 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:39Z INSDC last update 2023-02-03T00:50:39Z INSDC status public Submitter Id MGBC163460 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 81.10 completeness software CheckM contamination score 1.64 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163460 scientific_name uncultured Eubacteriales bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543880 SAMEA112433570 876091 uncultured Oscillibacter sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433570 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:39Z INSDC last update 2023-02-03T00:50:39Z INSDC status public Submitter Id MGBC163461 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 80.64 completeness software CheckM contamination score 0.89 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163461 scientific_name uncultured Oscillibacter sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543881 SAMEA112433571 286138 uncultured Dorea sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433571 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:39Z INSDC last update 2023-02-03T00:50:39Z INSDC status public Submitter Id MGBC163462 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 80.45 completeness software CheckM contamination score 3.61 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163462 scientific_name uncultured Dorea sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543882 SAMEA112433572 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433572 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:39Z INSDC last update 2023-02-03T00:50:39Z INSDC status public Submitter Id MGBC163463 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 80.37 completeness software CheckM contamination score 0.79 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163463 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543883 SAMEA112433573 1806076 uncultured Parvibacter sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433573 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:44Z INSDC last update 2023-02-03T00:50:44Z INSDC status public Submitter Id MGBC163464 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 80.34 completeness software CheckM contamination score 1.08 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163464 scientific_name uncultured Parvibacter sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543884 SAMEA112433574 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433574 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:44Z INSDC last update 2023-02-03T00:50:44Z INSDC status public Submitter Id MGBC163465 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 73.67 completeness software CheckM contamination score 0.68 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163465 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543885 SAMEA112433575 244328 uncultured Clostridia bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433575 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:44Z INSDC last update 2023-02-03T00:50:44Z INSDC status public Submitter Id MGBC163466 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 71.97 completeness software CheckM contamination score 2.68 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163466 scientific_name uncultured Clostridia bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543886 SAMEA112433576 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433576 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:44Z INSDC last update 2023-02-03T00:50:44Z INSDC status public Submitter Id MGBC163467 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 71.07 completeness software CheckM contamination score 3.96 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163467 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543887 SAMEA112433577 1796620 Acutalibacter muris ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433577 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:44Z INSDC last update 2023-02-03T00:50:44Z INSDC status public Submitter Id MGBC163468 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 70.48 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163468 scientific_name Acutalibacter muris sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543888 SAMEA112433578 331630 uncultured Erysipelotrichaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433578 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:44Z INSDC last update 2023-02-03T00:50:44Z INSDC status public Submitter Id MGBC163469 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 66.80 completeness software CheckM contamination score 1.41 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163469 scientific_name uncultured Erysipelotrichaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543889 SAMEA112433579 239935 Akkermansia muciniphila ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433579 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:44Z INSDC last update 2023-02-03T00:50:44Z INSDC status public Submitter Id MGBC163470 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 66.39 completeness software CheckM contamination score 0.44 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163470 scientific_name Akkermansia muciniphila sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543890 SAMEA112433580 349265 uncultured Atopostipes sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433580 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:44Z INSDC last update 2023-02-03T00:50:44Z INSDC status public Submitter Id MGBC163471 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 66.25 completeness software CheckM contamination score 0.54 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163471 scientific_name uncultured Atopostipes sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543891 SAMEA112433581 2676055 uncultured Schaedlerella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433581 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:48:57Z INSDC last update 2023-02-03T00:48:57Z INSDC status public Submitter Id MGBC163472 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 64.46 completeness software CheckM contamination score 2.75 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163472 scientific_name uncultured Schaedlerella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543892 SAMEA112433582 707003 uncultured Oscillospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433582 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:48:57Z INSDC last update 2023-02-03T00:48:57Z INSDC status public Submitter Id MGBC163473 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 63.39 completeness software CheckM contamination score 0.67 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163473 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543893 SAMEA112433583 707003 uncultured Oscillospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03T00:48:57Z ENA-LAST-UPDATE 2023-02-03T00:48:57Z External Id SAMEA112433583 INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:48:57Z INSDC last update 2023-02-03T00:48:57Z INSDC status public Submitter Id MGBC163474 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 63.29 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163474 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543894 SAMEA112433584 172733 uncultured Eubacteriales bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433584 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:48:57Z INSDC last update 2023-02-03T00:48:57Z INSDC status public Submitter Id MGBC163475 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 60.42 completeness software CheckM contamination score 1.60 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163475 scientific_name uncultured Eubacteriales bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543895 SAMEA112433585 2321402 uncultured Eggerthellaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433585 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:48:57Z INSDC last update 2023-02-03T00:48:57Z INSDC status public Submitter Id MGBC163476 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 56.85 completeness software CheckM contamination score 1.08 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163476 scientific_name uncultured Eggerthellaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543896 SAMEA112433586 707003 uncultured Oscillospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433586 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:48:57Z INSDC last update 2023-02-03T00:48:57Z INSDC status public Submitter Id MGBC163477 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software megahit_v1.1.1-2-g02102e1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 56.37 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474076 sample name MGBC163477 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543897 SAMEA112433587 331630 uncultured Erysipelotrichaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433587 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:48:57Z INSDC last update 2023-02-03T00:48:57Z INSDC status public Submitter Id MGBC163478 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 100 completeness software CheckM contamination score 1.26 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163478 scientific_name uncultured Erysipelotrichaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543898 SAMEA112433588 487175 Parasutterella excrementihominis ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433588 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:48:57Z INSDC last update 2023-02-03T00:48:57Z INSDC status public Submitter Id MGBC163479 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 100 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163479 scientific_name Parasutterella excrementihominis sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543899 SAMEA112433589 1690 Bifidobacterium pseudolongum subsp. globosum ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433589 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:04Z INSDC last update 2023-02-03T00:49:04Z INSDC status public Submitter Id MGBC163480 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.48 completeness software CheckM contamination score 1.11 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163480 scientific_name Bifidobacterium pseudolongum subsp. globosum sequencing method Illumina taxonomic identity marker multi-marker approach sub_species globosum ERS14543900 SAMEA112433590 2768039 uncultured Duncaniella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433590 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:05Z INSDC last update 2023-02-03T00:49:05Z INSDC status public Submitter Id MGBC163481 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.41 completeness software CheckM contamination score 0.38 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163481 scientific_name uncultured Duncaniella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543901 SAMEA112433591 707003 uncultured Oscillospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433591 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:05Z INSDC last update 2023-02-03T00:49:05Z INSDC status public Submitter Id MGBC163482 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.32 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163482 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543902 SAMEA112433592 2321400 uncultured Atopobiaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433592 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:05Z INSDC last update 2023-02-03T00:49:05Z INSDC status public Submitter Id MGBC163483 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.19 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163483 scientific_name uncultured Atopobiaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543903 SAMEA112433593 331630 uncultured Erysipelotrichaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433593 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:05Z INSDC last update 2023-02-03T00:49:05Z INSDC status public Submitter Id MGBC163484 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.05 completeness software CheckM contamination score 1.26 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163484 scientific_name uncultured Erysipelotrichaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543904 SAMEA112433594 69824 Thomasclavelia cocleata ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433594 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:05Z INSDC last update 2023-02-03T00:49:05Z INSDC status public Submitter Id MGBC163485 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.05 completeness software CheckM contamination score 0.47 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163485 scientific_name [Clostridium] cocleatum sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543905 SAMEA112433595 538949 uncultured Alistipes sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433595 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:05Z INSDC last update 2023-02-03T00:49:05Z INSDC status public Submitter Id MGBC163486 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.03 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163486 scientific_name uncultured Alistipes sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543906 SAMEA112433596 33959 Lactobacillus johnsonii ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433596 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:05Z INSDC last update 2023-02-03T00:49:05Z INSDC status public Submitter Id MGBC163487 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.96 completeness software CheckM contamination score 0.11 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163487 scientific_name Lactobacillus johnsonii sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543907 SAMEA112433597 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433597 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:11Z INSDC last update 2023-02-03T00:49:11Z INSDC status public Submitter Id MGBC163488 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.73 completeness software CheckM contamination score 2.39 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163488 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543908 SAMEA112433598 2321402 uncultured Eggerthellaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433598 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:11Z INSDC last update 2023-02-03T00:49:11Z INSDC status public Submitter Id MGBC163489 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.15 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163489 scientific_name uncultured Eggerthellaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543909 SAMEA112433599 172733 uncultured Eubacteriales bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433599 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:11Z INSDC last update 2023-02-03T00:49:11Z INSDC status public Submitter Id MGBC163491 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.98 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163491 scientific_name uncultured Eubacteriales bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543910 SAMEA112433600 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433600 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:11Z INSDC last update 2023-02-03T00:49:11Z INSDC status public Submitter Id MGBC163492 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.98 completeness software CheckM contamination score 1.83 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163492 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543911 SAMEA112433601 239935 Akkermansia muciniphila ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433601 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:11Z INSDC last update 2023-02-03T00:49:11Z INSDC status public Submitter Id MGBC163493 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.95 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163493 scientific_name Akkermansia muciniphila sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543912 SAMEA112433602 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433602 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:11Z INSDC last update 2023-02-03T00:49:11Z INSDC status public Submitter Id MGBC163494 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.92 completeness software CheckM contamination score 0.38 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163494 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543913 SAMEA112433603 1796620 Acutalibacter muris ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433603 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:11Z INSDC last update 2023-02-03T00:49:11Z INSDC status public Submitter Id MGBC163495 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.65 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163495 scientific_name Acutalibacter muris sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543914 SAMEA112433604 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433604 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:11Z INSDC last update 2023-02-03T00:49:11Z INSDC status public Submitter Id MGBC163496 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.54 completeness software CheckM contamination score 0.12 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163496 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543915 SAMEA112433605 244328 uncultured Clostridia bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433605 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:19Z INSDC last update 2023-02-03T00:49:19Z INSDC status public Submitter Id MGBC163497 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.31 completeness software CheckM contamination score 0.67 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163497 scientific_name uncultured Clostridia bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543916 SAMEA112433606 2768039 uncultured Duncaniella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433606 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:19Z INSDC last update 2023-02-03T00:49:19Z INSDC status public Submitter Id MGBC163498 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.16 completeness software CheckM contamination score 0.38 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163498 scientific_name uncultured Duncaniella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543917 SAMEA112433607 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433607 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:19Z INSDC last update 2023-02-03T00:49:19Z INSDC status public Submitter Id MGBC163499 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.16 completeness software CheckM contamination score 2.60 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163499 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543918 SAMEA112433608 707003 uncultured Oscillospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433608 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:19Z INSDC last update 2023-02-03T00:49:19Z INSDC status public Submitter Id MGBC163500 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.64 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163500 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543919 SAMEA112433609 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433609 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:19Z INSDC last update 2023-02-03T00:49:19Z INSDC status public Submitter Id MGBC163501 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.62 completeness software CheckM contamination score 4.01 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163501 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543920 SAMEA112433610 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433610 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:19Z INSDC last update 2023-02-03T00:49:19Z INSDC status public Submitter Id MGBC163502 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.41 completeness software CheckM contamination score 0.38 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163502 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543921 SAMEA112433611 172733 uncultured Eubacteriales bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433611 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:19Z INSDC last update 2023-02-03T00:49:19Z INSDC status public Submitter Id MGBC163503 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.37 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163503 scientific_name uncultured Eubacteriales bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543922 SAMEA112433612 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433612 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:19Z INSDC last update 2023-02-03T00:49:19Z INSDC status public Submitter Id MGBC163504 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 95.86 completeness software CheckM contamination score 2.97 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163504 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543923 SAMEA112433613 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433613 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:26Z INSDC last update 2023-02-03T00:49:26Z INSDC status public Submitter Id MGBC163505 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 95.58 completeness software CheckM contamination score 1.63 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163505 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543924 SAMEA112433614 707003 uncultured Oscillospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433614 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:26Z INSDC last update 2023-02-03T00:49:26Z INSDC status public Submitter Id MGBC163506 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 95.41 completeness software CheckM contamination score 0.69 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163506 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543925 SAMEA112433615 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433615 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:26Z INSDC last update 2023-02-03T00:49:26Z INSDC status public Submitter Id MGBC163507 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 94.93 completeness software CheckM contamination score 0.16 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163507 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543926 SAMEA112433616 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433616 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:26Z INSDC last update 2023-02-03T00:49:26Z INSDC status public Submitter Id MGBC163508 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 94.59 completeness software CheckM contamination score 1.13 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163508 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543927 SAMEA112433617 818 Bacteroides thetaiotaomicron ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433617 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:26Z INSDC last update 2023-02-03T00:49:26Z INSDC status public Submitter Id MGBC163509 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 94.53 completeness software CheckM contamination score 0.57 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163509 scientific_name Bacteroides thetaiotaomicron sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543928 SAMEA112433618 446043 uncultured Lachnospira sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433618 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:26Z INSDC last update 2023-02-03T00:49:26Z INSDC status public Submitter Id MGBC163512 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 93.28 completeness software CheckM contamination score 0.67 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163512 scientific_name uncultured Lachnospira sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543929 SAMEA112433619 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433619 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:26Z INSDC last update 2023-02-03T00:49:26Z INSDC status public Submitter Id MGBC163513 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 93.12 completeness software CheckM contamination score 1.68 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163513 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543930 SAMEA112433620 286138 uncultured Dorea sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433620 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:26Z INSDC last update 2023-02-03T00:49:26Z INSDC status public Submitter Id MGBC163514 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 92.95 completeness software CheckM contamination score 0.15 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163514 scientific_name uncultured Dorea sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543931 SAMEA112433621 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433621 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:33Z INSDC last update 2023-02-03T00:49:33Z INSDC status public Submitter Id MGBC163515 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 92.44 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163515 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543932 SAMEA112433622 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433622 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:33Z INSDC last update 2023-02-03T00:49:33Z INSDC status public Submitter Id MGBC163516 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 92.40 completeness software CheckM contamination score 2.53 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163516 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543933 SAMEA112433623 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433623 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:33Z INSDC last update 2023-02-03T00:49:33Z INSDC status public Submitter Id MGBC163517 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 91.85 completeness software CheckM contamination score 1.44 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163517 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543934 SAMEA112433624 224209 uncultured Bacilli bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433624 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:33Z INSDC last update 2023-02-03T00:49:33Z INSDC status public Submitter Id MGBC163518 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 91.57 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163518 scientific_name uncultured Bacilli bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543935 SAMEA112433625 2321402 uncultured Eggerthellaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433625 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:33Z INSDC last update 2023-02-03T00:49:33Z INSDC status public Submitter Id MGBC163519 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 91.43 completeness software CheckM contamination score 1.42 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163519 scientific_name uncultured Eggerthellaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543936 SAMEA112433626 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433626 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:33Z INSDC last update 2023-02-03T00:49:33Z INSDC status public Submitter Id MGBC163520 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 91.37 completeness software CheckM contamination score 1.52 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163520 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543937 SAMEA112433627 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433627 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:33Z INSDC last update 2023-02-03T00:49:33Z INSDC status public Submitter Id MGBC163521 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 91.27 completeness software CheckM contamination score 1.13 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163521 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543938 SAMEA112433628 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433628 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:33Z INSDC last update 2023-02-03T00:49:33Z INSDC status public Submitter Id MGBC163522 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 90.70 completeness software CheckM contamination score 3.16 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163522 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543939 SAMEA112433629 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433629 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:40Z INSDC last update 2023-02-03T00:49:40Z INSDC status public Submitter Id MGBC163523 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 90.57 completeness software CheckM contamination score 0.38 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163523 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543940 SAMEA112433630 1671927 uncultured Acetatifactor sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433630 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:40Z INSDC last update 2023-02-03T00:49:40Z INSDC status public Submitter Id MGBC163524 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 90.55 completeness software CheckM contamination score 2.39 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163524 scientific_name uncultured Acetatifactor sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543941 SAMEA112433631 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433631 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:40Z INSDC last update 2023-02-03T00:49:40Z INSDC status public Submitter Id MGBC163525 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 90.22 completeness software CheckM contamination score 1.74 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163525 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543942 SAMEA112433632 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433632 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:40Z INSDC last update 2023-02-03T00:49:40Z INSDC status public Submitter Id MGBC163526 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 90.14 completeness software CheckM contamination score 2.86 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163526 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543943 SAMEA112433633 165185 uncultured Eubacterium sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433633 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:40Z INSDC last update 2023-02-03T00:49:40Z INSDC status public Submitter Id MGBC163527 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 89.43 completeness software CheckM contamination score 1.04 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163527 scientific_name uncultured Eubacterium sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543944 SAMEA112433634 344338 uncultured Bacillota bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433634 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:40Z INSDC last update 2023-02-03T00:49:40Z INSDC status public Submitter Id MGBC163528 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 87.58 completeness software CheckM contamination score 0.99 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163528 scientific_name uncultured Firmicutes bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543945 SAMEA112433635 707003 uncultured Oscillospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433635 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:40Z INSDC last update 2023-02-03T00:49:40Z INSDC status public Submitter Id MGBC163529 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 87.57 completeness software CheckM contamination score 0.34 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163529 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543946 SAMEA112433636 875803 uncultured Adlercreutzia sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433636 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:40Z INSDC last update 2023-02-03T00:49:40Z INSDC status public Submitter Id MGBC163530 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 86.56 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163530 scientific_name uncultured Adlercreutzia sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543947 SAMEA112433637 876091 uncultured Oscillibacter sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433637 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:47Z INSDC last update 2023-02-03T00:49:47Z INSDC status public Submitter Id MGBC163531 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 85.13 completeness software CheckM contamination score 0.67 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163531 scientific_name uncultured Oscillibacter sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543948 SAMEA112433638 59620 uncultured Clostridium sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433638 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:47Z INSDC last update 2023-02-03T00:49:47Z INSDC status public Submitter Id MGBC163532 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 83.87 completeness software CheckM contamination score 0.16 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163532 scientific_name uncultured Clostridium sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543949 SAMEA112433639 2054177 Christensenellaceae bacterium assembly software metaSPAdes_v3.10.1 broad-scale environmental context mouse gut collection date not provided sample derived from SRR12474068 geographic location (longitude) not provided DD binning parameters default parameters, kmer: 4 contamination score 1.59 % ENA-FIRST-PUBLIC 2023-02-03T00:49:47Z ENA-LAST-UPDATE 2023-02-03T00:49:47Z completeness software CheckM geographic location (country and/or sea) USA binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) organism Candidatus Borkfalkiaceae bacterium assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics taxonomic identity marker multi-marker approach completeness score 83.57 % environmental medium Distal colon geographic location (latitude) not provided DD scientific_name Candidatus Borkfalkiaceae bacterium common name investigation type metagenome-assembled genome local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sequencing method Illumina isolation_source Distal colon ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 ERS14543950 SAMEA112433640 286138 uncultured Dorea sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433640 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:47Z INSDC last update 2023-02-03T00:49:47Z INSDC status public Submitter Id MGBC163534 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 83.11 completeness software CheckM contamination score 1.85 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163534 scientific_name uncultured Dorea sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543951 SAMEA112433641 2321402 uncultured Eggerthellaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433641 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:47Z INSDC last update 2023-02-03T00:49:47Z INSDC status public Submitter Id MGBC163535 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 82.44 completeness software CheckM contamination score 3.10 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163535 scientific_name uncultured Eggerthellaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543952 SAMEA112433642 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433642 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:47Z INSDC last update 2023-02-03T00:49:47Z INSDC status public Submitter Id MGBC163536 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 81.84 completeness software CheckM contamination score 2.49 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163536 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543953 SAMEA112433643 2768039 uncultured Duncaniella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433643 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:47Z INSDC last update 2023-02-03T00:49:47Z INSDC status public Submitter Id MGBC163537 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 77.54 completeness software CheckM contamination score 0.38 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163537 scientific_name uncultured Duncaniella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543954 SAMEA112433644 875803 uncultured Adlercreutzia sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433644 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:47Z INSDC last update 2023-02-03T00:49:47Z INSDC status public Submitter Id MGBC163538 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 75.58 completeness software CheckM contamination score 3.22 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163538 scientific_name uncultured Adlercreutzia sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543955 SAMEA112433645 2676055 uncultured Schaedlerella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433645 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:54Z INSDC last update 2023-02-03T00:49:54Z INSDC status public Submitter Id MGBC163539 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 74.81 completeness software CheckM contamination score 2.92 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163539 scientific_name uncultured Schaedlerella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543956 SAMEA112433646 224209 uncultured Bacilli bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433646 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:54Z INSDC last update 2023-02-03T00:49:54Z INSDC status public Submitter Id MGBC163540 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 73.99 completeness software CheckM contamination score 1.12 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163540 scientific_name uncultured Bacilli bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543957 SAMEA112433647 905011 uncultured Anaerotruncus sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433647 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:54Z INSDC last update 2023-02-03T00:49:54Z INSDC status public Submitter Id MGBC163541 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 72.95 completeness software CheckM contamination score 0.34 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163541 scientific_name uncultured Anaerotruncus sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543958 SAMEA112433648 244328 uncultured Clostridia bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433648 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:54Z INSDC last update 2023-02-03T00:49:54Z INSDC status public Submitter Id MGBC163542 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 71.18 completeness software CheckM contamination score 2.24 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163542 scientific_name uncultured Clostridia bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543959 SAMEA112433649 876091 uncultured Oscillibacter sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433649 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:54Z INSDC last update 2023-02-03T00:49:54Z INSDC status public Submitter Id MGBC163543 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 69.95 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163543 scientific_name uncultured Oscillibacter sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543960 SAMEA112433650 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433650 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:54Z INSDC last update 2023-02-03T00:49:54Z INSDC status public Submitter Id MGBC163544 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 61.36 completeness software CheckM contamination score 1.26 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163544 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543961 SAMEA112433651 224209 uncultured Bacilli bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433651 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:54Z INSDC last update 2023-02-03T00:49:54Z INSDC status public Submitter Id MGBC163545 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 61.14 completeness software CheckM contamination score 1.28 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474068 sample name MGBC163545 scientific_name uncultured Bacilli bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543962 SAMEA112433652 2321402 uncultured Eggerthellaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433652 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:54Z INSDC last update 2023-02-03T00:49:54Z INSDC status public Submitter Id MGBC163546 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 100 completeness software CheckM contamination score 0.81 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163546 scientific_name uncultured Eggerthellaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543963 SAMEA112433653 1690 Bifidobacterium pseudolongum subsp. globosum ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433653 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:01Z INSDC last update 2023-02-03T00:50:01Z INSDC status public Submitter Id MGBC163547 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.77 completeness software CheckM contamination score 0.44 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163547 scientific_name Bifidobacterium pseudolongum subsp. globosum sequencing method Illumina taxonomic identity marker multi-marker approach sub_species globosum ERS14543964 SAMEA112433654 2768039 uncultured Duncaniella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433654 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:01Z INSDC last update 2023-02-03T00:50:01Z INSDC status public Submitter Id MGBC163548 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.43 completeness software CheckM contamination score 0.40 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163548 scientific_name uncultured Duncaniella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543965 SAMEA112433655 2768039 uncultured Duncaniella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433655 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:01Z INSDC last update 2023-02-03T00:50:01Z INSDC status public Submitter Id MGBC163549 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.43 completeness software CheckM contamination score 1.20 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163549 scientific_name uncultured Duncaniella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543966 SAMEA112433656 2321400 uncultured Atopobiaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433656 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:01Z INSDC last update 2023-02-03T00:50:01Z INSDC status public Submitter Id MGBC163550 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.19 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163550 scientific_name uncultured Atopobiaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543967 SAMEA112433657 2321402 uncultured Eggerthellaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433657 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:01Z INSDC last update 2023-02-03T00:50:01Z INSDC status public Submitter Id MGBC163551 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.07 completeness software CheckM contamination score 1.08 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163551 scientific_name uncultured Eggerthellaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543968 SAMEA112433658 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433658 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:01Z INSDC last update 2023-02-03T00:50:01Z INSDC status public Submitter Id MGBC163552 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.05 completeness software CheckM contamination score 1.63 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163552 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543969 SAMEA112433659 2768039 uncultured Duncaniella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433659 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:01Z INSDC last update 2023-02-03T00:50:01Z INSDC status public Submitter Id MGBC163553 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.05 completeness software CheckM contamination score 0.88 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163553 scientific_name uncultured Duncaniella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543970 SAMEA112433660 538949 uncultured Alistipes sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433660 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:01Z INSDC last update 2023-02-03T00:50:01Z INSDC status public Submitter Id MGBC163554 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.03 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163554 scientific_name uncultured Alistipes sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543971 SAMEA112433661 33959 Lactobacillus johnsonii ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433661 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:09Z INSDC last update 2023-02-03T00:50:09Z INSDC status public Submitter Id MGBC163555 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.96 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163555 scientific_name Lactobacillus johnsonii sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543972 SAMEA112433662 446043 uncultured Lachnospira sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433662 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:09Z INSDC last update 2023-02-03T00:50:09Z INSDC status public Submitter Id MGBC163556 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.65 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163556 scientific_name uncultured Lachnospira sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543973 SAMEA112433663 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433663 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:09Z INSDC last update 2023-02-03T00:50:09Z INSDC status public Submitter Id MGBC163557 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.27 completeness software CheckM contamination score 1.25 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163557 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543974 SAMEA112433664 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433664 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:09Z INSDC last update 2023-02-03T00:50:09Z INSDC status public Submitter Id MGBC163559 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.98 completeness software CheckM contamination score 1.83 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163559 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543975 SAMEA112433665 239935 Akkermansia muciniphila ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433665 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:09Z INSDC last update 2023-02-03T00:50:09Z INSDC status public Submitter Id MGBC163560 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.95 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163560 scientific_name Akkermansia muciniphila sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543976 SAMEA112433666 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433666 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:09Z INSDC last update 2023-02-03T00:50:09Z INSDC status public Submitter Id MGBC163561 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.94 completeness software CheckM contamination score 0.38 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163561 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543977 SAMEA112433667 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433667 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:09Z INSDC last update 2023-02-03T00:50:09Z INSDC status public Submitter Id MGBC163562 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.41 completeness software CheckM contamination score 0.86 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163562 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543978 SAMEA112433668 172733 uncultured Eubacteriales bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433668 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:09Z INSDC last update 2023-02-03T00:50:09Z INSDC status public Submitter Id MGBC163563 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.31 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163563 scientific_name uncultured Eubacteriales bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543979 SAMEA112433669 165185 uncultured Eubacterium sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433669 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:17Z INSDC last update 2023-02-03T00:50:17Z INSDC status public Submitter Id MGBC163565 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.89 completeness software CheckM contamination score 1.42 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163565 scientific_name uncultured Eubacterium sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543980 SAMEA112433670 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433670 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:17Z INSDC last update 2023-02-03T00:50:17Z INSDC status public Submitter Id MGBC163566 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.83 completeness software CheckM contamination score 1.81 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163566 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543981 SAMEA112433671 707003 uncultured Oscillospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433671 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:17Z INSDC last update 2023-02-03T00:50:17Z INSDC status public Submitter Id MGBC163567 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.64 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163567 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543982 SAMEA112433672 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433672 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:17Z INSDC last update 2023-02-03T00:50:17Z INSDC status public Submitter Id MGBC163568 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.47 completeness software CheckM contamination score 1.51 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163568 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543983 SAMEA112433673 1671927 uncultured Acetatifactor sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433673 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:17Z INSDC last update 2023-02-03T00:50:17Z INSDC status public Submitter Id MGBC163569 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.38 completeness software CheckM contamination score 1.92 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163569 scientific_name uncultured Acetatifactor sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543984 SAMEA112433674 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433674 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:17Z INSDC last update 2023-02-03T00:50:17Z INSDC status public Submitter Id MGBC163570 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.30 completeness software CheckM contamination score 1.64 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163570 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543985 SAMEA112433675 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433675 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:17Z INSDC last update 2023-02-03T00:50:17Z INSDC status public Submitter Id MGBC163571 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 94.72 completeness software CheckM contamination score 1.44 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163571 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543986 SAMEA112433676 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433676 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:17Z INSDC last update 2023-02-03T00:50:17Z INSDC status public Submitter Id MGBC163572 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 94.69 completeness software CheckM contamination score 1.03 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163572 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543987 SAMEA112433677 707003 uncultured Oscillospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433677 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:24Z INSDC last update 2023-02-03T00:50:24Z INSDC status public Submitter Id MGBC163573 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 94.63 completeness software CheckM contamination score 0.81 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163573 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543988 SAMEA112433678 1796620 Acutalibacter muris ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433678 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:24Z INSDC last update 2023-02-03T00:50:24Z INSDC status public Submitter Id MGBC163574 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 94.63 completeness software CheckM contamination score 0.67 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163574 scientific_name Acutalibacter muris sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543989 SAMEA112433679 172733 uncultured Eubacteriales bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433679 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:24Z INSDC last update 2023-02-03T00:50:24Z INSDC status public Submitter Id MGBC163575 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 94.22 completeness software CheckM contamination score 0.81 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163575 scientific_name uncultured Eubacteriales bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543990 SAMEA112433680 172733 uncultured Eubacteriales bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433680 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:24Z INSDC last update 2023-02-03T00:50:24Z INSDC status public Submitter Id MGBC163576 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 94.13 completeness software CheckM contamination score 0.67 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163576 scientific_name uncultured Eubacteriales bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543991 SAMEA112433681 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433681 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:24Z INSDC last update 2023-02-03T00:50:24Z INSDC status public Submitter Id MGBC163577 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 94.13 completeness software CheckM contamination score 1.49 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163577 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543992 SAMEA112433682 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433682 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:24Z INSDC last update 2023-02-03T00:50:24Z INSDC status public Submitter Id MGBC163578 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 94.03 completeness software CheckM contamination score 1.28 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163578 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543993 SAMEA112433683 2676055 uncultured Schaedlerella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433683 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:24Z INSDC last update 2023-02-03T00:50:24Z INSDC status public Submitter Id MGBC163579 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 93.68 completeness software CheckM contamination score 2.05 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163579 scientific_name uncultured Schaedlerella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543994 SAMEA112433684 1751881 uncultured Hungatella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433684 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:24Z INSDC last update 2023-02-03T00:50:24Z INSDC status public Submitter Id MGBC163580 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 93.67 completeness software CheckM contamination score 1.05 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163580 scientific_name uncultured Hungatella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543995 SAMEA112433685 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433685 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:31Z INSDC last update 2023-02-03T00:50:31Z INSDC status public Submitter Id MGBC163581 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 93.45 completeness software CheckM contamination score 0.57 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163581 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543996 SAMEA112433686 1671927 uncultured Acetatifactor sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433686 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:31Z INSDC last update 2023-02-03T00:50:31Z INSDC status public Submitter Id MGBC163582 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 92.86 completeness software CheckM contamination score 2.20 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163582 scientific_name uncultured Acetatifactor sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543997 SAMEA112433687 876091 uncultured Oscillibacter sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433687 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:32Z INSDC last update 2023-02-03T00:50:32Z INSDC status public Submitter Id MGBC163583 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 92.78 completeness software CheckM contamination score 0.45 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163583 scientific_name uncultured Oscillibacter sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543998 SAMEA112433688 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433688 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:32Z INSDC last update 2023-02-03T00:50:32Z INSDC status public Submitter Id MGBC163584 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 92.39 completeness software CheckM contamination score 2.01 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163584 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14543999 SAMEA112433689 165185 uncultured Eubacterium sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433689 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:32Z INSDC last update 2023-02-03T00:50:32Z INSDC status public Submitter Id MGBC163585 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 92.17 completeness software CheckM contamination score 1.48 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163585 scientific_name uncultured Eubacterium sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544000 SAMEA112433690 297316 uncultured Turicibacter sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433690 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:32Z INSDC last update 2023-02-03T00:50:32Z INSDC status public Submitter Id MGBC163586 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 91.60 completeness software CheckM contamination score 2.58 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163586 scientific_name uncultured Turicibacter sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544001 SAMEA112433691 224209 uncultured Bacilli bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433691 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:32Z INSDC last update 2023-02-03T00:50:32Z INSDC status public Submitter Id MGBC163587 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 91.57 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163587 scientific_name uncultured Bacilli bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544002 SAMEA112433692 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433692 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:32Z INSDC last update 2023-02-03T00:50:32Z INSDC status public Submitter Id MGBC163588 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 90.96 completeness software CheckM contamination score 0.75 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163588 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544003 SAMEA112433693 487175 Parasutterella excrementihominis ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433693 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:39Z INSDC last update 2023-02-03T00:50:39Z INSDC status public Submitter Id MGBC163589 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 90.50 completeness software CheckM contamination score 0.63 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163589 scientific_name Parasutterella excrementihominis sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544004 SAMEA112433694 59620 uncultured Clostridium sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433694 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:39Z INSDC last update 2023-02-03T00:50:39Z INSDC status public Submitter Id MGBC163590 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 89.94 completeness software CheckM contamination score 0.39 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163590 scientific_name uncultured Clostridium sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544005 SAMEA112433695 2676055 uncultured Schaedlerella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433695 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:39Z INSDC last update 2023-02-03T00:50:39Z INSDC status public Submitter Id MGBC163591 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 89.67 completeness software CheckM contamination score 2.11 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163591 scientific_name uncultured Schaedlerella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544006 SAMEA112433696 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433696 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:39Z INSDC last update 2023-02-03T00:50:39Z INSDC status public Submitter Id MGBC163592 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 89.02 completeness software CheckM contamination score 2.53 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163592 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544007 SAMEA112433697 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433697 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:39Z INSDC last update 2023-02-03T00:50:39Z INSDC status public Submitter Id MGBC163593 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 88.31 completeness software CheckM contamination score 1.15 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163593 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544008 SAMEA112433698 1751881 uncultured Hungatella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433698 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:39Z INSDC last update 2023-02-03T00:50:39Z INSDC status public Submitter Id MGBC163594 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 87.78 completeness software CheckM contamination score 2.59 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163594 scientific_name uncultured Hungatella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544009 SAMEA112433699 1671927 uncultured Acetatifactor sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433699 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:39Z INSDC last update 2023-02-03T00:50:39Z INSDC status public Submitter Id MGBC163595 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 87.17 completeness software CheckM contamination score 3.21 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163595 scientific_name uncultured Acetatifactor sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544010 SAMEA112433700 707003 uncultured Oscillospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433700 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:39Z INSDC last update 2023-02-03T00:50:39Z INSDC status public Submitter Id MGBC163596 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 87.08 completeness software CheckM contamination score 2.04 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163596 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544011 SAMEA112433701 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433701 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:44Z INSDC last update 2023-02-03T00:50:44Z INSDC status public Submitter Id MGBC163597 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 82.02 completeness software CheckM contamination score 1.45 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163597 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544012 SAMEA112433702 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433702 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:44Z INSDC last update 2023-02-03T00:50:44Z INSDC status public Submitter Id MGBC163598 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 82.01 completeness software CheckM contamination score 2.53 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163598 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544013 SAMEA112433703 344338 uncultured Bacillota bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433703 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:44Z INSDC last update 2023-02-03T00:50:44Z INSDC status public Submitter Id MGBC163599 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 81.09 completeness software CheckM contamination score 1.14 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163599 scientific_name uncultured Firmicutes bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544014 SAMEA112433704 286138 uncultured Dorea sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433704 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:44Z INSDC last update 2023-02-03T00:50:44Z INSDC status public Submitter Id MGBC163600 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 80.34 completeness software CheckM contamination score 1.46 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163600 scientific_name uncultured Dorea sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544015 SAMEA112433705 905011 uncultured Anaerotruncus sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433705 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:44Z INSDC last update 2023-02-03T00:50:44Z INSDC status public Submitter Id MGBC163601 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 79.78 completeness software CheckM contamination score 0.83 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163601 scientific_name uncultured Anaerotruncus sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544016 SAMEA112433706 818 Bacteroides thetaiotaomicron ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433706 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:44Z INSDC last update 2023-02-03T00:50:44Z INSDC status public Submitter Id MGBC163602 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 79.74 completeness software CheckM contamination score 2.01 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163602 scientific_name Bacteroides thetaiotaomicron sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544017 SAMEA112433707 707003 uncultured Oscillospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433707 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:44Z INSDC last update 2023-02-03T00:50:44Z INSDC status public Submitter Id MGBC163603 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 78.52 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163603 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544018 SAMEA112433708 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433708 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:44Z INSDC last update 2023-02-03T00:50:44Z INSDC status public Submitter Id MGBC163604 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 77.65 completeness software CheckM contamination score 1.26 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163604 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544019 SAMEA112433709 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433709 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:48:57Z INSDC last update 2023-02-03T00:48:57Z INSDC status public Submitter Id MGBC163605 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 77.12 completeness software CheckM contamination score 0.38 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163605 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544020 SAMEA112433710 707003 uncultured Oscillospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433710 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:48:57Z INSDC last update 2023-02-03T00:48:57Z INSDC status public Submitter Id MGBC163606 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 75.46 completeness software CheckM contamination score 1.57 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163606 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544021 SAMEA112433711 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433711 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:48:57Z INSDC last update 2023-02-03T00:48:57Z INSDC status public Submitter Id MGBC163607 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 73.84 completeness software CheckM contamination score 2.65 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163607 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544022 SAMEA112433712 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433712 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:48:57Z INSDC last update 2023-02-03T00:48:57Z INSDC status public Submitter Id MGBC163608 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 73.81 completeness software CheckM contamination score 0.32 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163608 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544023 SAMEA112433713 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433713 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:48:57Z INSDC last update 2023-02-03T00:48:57Z INSDC status public Submitter Id MGBC163609 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 67.62 completeness software CheckM contamination score 2.01 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163609 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544024 SAMEA112433714 707003 uncultured Oscillospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433714 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:48:57Z INSDC last update 2023-02-03T00:48:57Z INSDC status public Submitter Id MGBC163610 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 67.55 completeness software CheckM contamination score 2.91 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163610 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544025 SAMEA112433715 707003 uncultured Oscillospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433715 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:48:57Z INSDC last update 2023-02-03T00:48:57Z INSDC status public Submitter Id MGBC163611 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 63.05 completeness software CheckM contamination score 2.28 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163611 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544026 SAMEA112433716 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433716 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:48:58Z INSDC last update 2023-02-03T00:48:58Z INSDC status public Submitter Id MGBC163612 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 60.23 completeness software CheckM contamination score 1.75 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163612 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544027 SAMEA112433717 293430 uncultured Ureaplasma sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433717 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:05Z INSDC last update 2023-02-03T00:49:05Z INSDC status public Submitter Id MGBC163613 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 57.29 completeness software CheckM contamination score 1.15 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474083 sample name MGBC163613 scientific_name uncultured Ureaplasma sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544028 SAMEA112433718 487175 Parasutterella excrementihominis ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433718 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:05Z INSDC last update 2023-02-03T00:49:05Z INSDC status public Submitter Id MGBC163614 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 100 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163614 scientific_name Parasutterella excrementihominis sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544029 SAMEA112433719 1671927 uncultured Acetatifactor sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433719 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:05Z INSDC last update 2023-02-03T00:49:05Z INSDC status public Submitter Id MGBC163615 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.42 completeness software CheckM contamination score 3.56 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163615 scientific_name uncultured Acetatifactor sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544030 SAMEA112433720 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433720 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:05Z INSDC last update 2023-02-03T00:49:05Z INSDC status public Submitter Id MGBC163616 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.41 completeness software CheckM contamination score 1.51 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163616 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544031 SAMEA112433721 2768039 uncultured Duncaniella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433721 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:05Z INSDC last update 2023-02-03T00:49:05Z INSDC status public Submitter Id MGBC163617 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.39 completeness software CheckM contamination score 0.88 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163617 scientific_name uncultured Duncaniella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544032 SAMEA112433722 2768039 uncultured Duncaniella sp. ENA-FIRST-PUBLIC 2023-02-03T00:49:05Z ENA-LAST-UPDATE 2023-02-03T00:49:05Z External Id SAMEA112433722 INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:05Z INSDC last update 2023-02-03T00:49:05Z INSDC status public Submitter Id MGBC163618 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.35 completeness software CheckM contamination score 0.38 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163618 scientific_name uncultured Duncaniella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544033 SAMEA112433723 2321400 uncultured Atopobiaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433723 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:05Z INSDC last update 2023-02-03T00:49:05Z INSDC status public Submitter Id MGBC163619 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.19 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163619 scientific_name uncultured Atopobiaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544034 SAMEA112433724 538949 uncultured Alistipes sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433724 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:05Z INSDC last update 2023-02-03T00:49:05Z INSDC status public Submitter Id MGBC163620 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.03 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163620 scientific_name uncultured Alistipes sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544035 SAMEA112433725 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433725 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:11Z INSDC last update 2023-02-03T00:49:11Z INSDC status public Submitter Id MGBC163621 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.85 completeness software CheckM contamination score 4.33 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163621 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544036 SAMEA112433726 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433726 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:11Z INSDC last update 2023-02-03T00:49:11Z INSDC status public Submitter Id MGBC163622 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.73 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163622 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544037 SAMEA112433727 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433727 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:12Z INSDC last update 2023-02-03T00:49:12Z INSDC status public Submitter Id MGBC163623 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.52 completeness software CheckM contamination score 3.38 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163623 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544038 SAMEA112433728 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433728 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:12Z INSDC last update 2023-02-03T00:49:12Z INSDC status public Submitter Id MGBC163624 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.41 completeness software CheckM contamination score 1.26 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163624 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544039 SAMEA112433729 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433729 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:12Z INSDC last update 2023-02-03T00:49:12Z INSDC status public Submitter Id MGBC163625 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.41 completeness software CheckM contamination score 0.63 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163625 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544040 SAMEA112433730 69824 Thomasclavelia cocleata ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433730 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:12Z INSDC last update 2023-02-03T00:49:12Z INSDC status public Submitter Id MGBC163626 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.11 completeness software CheckM contamination score 0.57 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163626 scientific_name [Clostridium] cocleatum sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544041 SAMEA112433731 818 Bacteroides thetaiotaomicron ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433731 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:12Z INSDC last update 2023-02-03T00:49:12Z INSDC status public Submitter Id MGBC163627 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.09 completeness software CheckM contamination score 0.57 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163627 scientific_name Bacteroides thetaiotaomicron sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544042 SAMEA112433732 172733 uncultured Eubacteriales bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433732 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:12Z INSDC last update 2023-02-03T00:49:12Z INSDC status public Submitter Id MGBC163628 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.98 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163628 scientific_name uncultured Eubacteriales bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544043 SAMEA112433733 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433733 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:19Z INSDC last update 2023-02-03T00:49:19Z INSDC status public Submitter Id MGBC163629 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.90 completeness software CheckM contamination score 0.38 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163629 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544044 SAMEA112433734 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433734 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:19Z INSDC last update 2023-02-03T00:49:19Z INSDC status public Submitter Id MGBC163630 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.78 completeness software CheckM contamination score 1.03 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163630 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544045 SAMEA112433735 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433735 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:19Z INSDC last update 2023-02-03T00:49:19Z INSDC status public Submitter Id MGBC163631 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.54 completeness software CheckM contamination score 0.12 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163631 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544046 SAMEA112433736 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433736 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:19Z INSDC last update 2023-02-03T00:49:19Z INSDC status public Submitter Id MGBC163632 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.33 completeness software CheckM contamination score 1.16 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163632 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544047 SAMEA112433737 244328 uncultured Clostridia bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433737 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:19Z INSDC last update 2023-02-03T00:49:19Z INSDC status public Submitter Id MGBC163633 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.31 completeness software CheckM contamination score 0.67 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163633 scientific_name uncultured Clostridia bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544048 SAMEA112433738 331630 uncultured Erysipelotrichaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433738 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:19Z INSDC last update 2023-02-03T00:49:19Z INSDC status public Submitter Id MGBC163634 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.16 completeness software CheckM contamination score 1.26 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163634 scientific_name uncultured Erysipelotrichaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544049 SAMEA112433739 1671927 uncultured Acetatifactor sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433739 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:19Z INSDC last update 2023-02-03T00:49:19Z INSDC status public Submitter Id MGBC163635 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.12 completeness software CheckM contamination score 1.91 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163635 scientific_name uncultured Acetatifactor sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544050 SAMEA112433740 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433740 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:19Z INSDC last update 2023-02-03T00:49:19Z INSDC status public Submitter Id MGBC163636 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.04 completeness software CheckM contamination score 0.48 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163636 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544051 SAMEA112433741 446043 uncultured Lachnospira sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433741 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:26Z INSDC last update 2023-02-03T00:49:26Z INSDC status public Submitter Id MGBC163637 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.64 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163637 scientific_name uncultured Lachnospira sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544052 SAMEA112433742 707003 uncultured Oscillospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433742 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:26Z INSDC last update 2023-02-03T00:49:26Z INSDC status public Submitter Id MGBC163638 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.64 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163638 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544053 SAMEA112433743 905011 uncultured Anaerotruncus sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433743 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:26Z INSDC last update 2023-02-03T00:49:26Z INSDC status public Submitter Id MGBC163639 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.64 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163639 scientific_name uncultured Anaerotruncus sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544054 SAMEA112433744 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433744 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:26Z INSDC last update 2023-02-03T00:49:26Z INSDC status public Submitter Id MGBC163640 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.62 completeness software CheckM contamination score 1.41 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163640 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544055 SAMEA112433745 165185 uncultured Eubacterium sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433745 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:26Z INSDC last update 2023-02-03T00:49:26Z INSDC status public Submitter Id MGBC163641 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.43 completeness software CheckM contamination score 1.61 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163641 scientific_name uncultured Eubacterium sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544056 SAMEA112433746 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433746 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:26Z INSDC last update 2023-02-03T00:49:26Z INSDC status public Submitter Id MGBC163642 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.42 completeness software CheckM contamination score 2.35 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163642 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544057 SAMEA112433747 707003 uncultured Oscillospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433747 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:26Z INSDC last update 2023-02-03T00:49:26Z INSDC status public Submitter Id MGBC163643 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.42 completeness software CheckM contamination score 0.67 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163643 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544058 SAMEA112433748 1796620 Acutalibacter muris ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433748 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:26Z INSDC last update 2023-02-03T00:49:26Z INSDC status public Submitter Id MGBC163644 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.30 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163644 scientific_name Acutalibacter muris sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544059 SAMEA112433749 2768039 uncultured Duncaniella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433749 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:33Z INSDC last update 2023-02-03T00:49:33Z INSDC status public Submitter Id MGBC163645 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 95.97 completeness software CheckM contamination score 0.75 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163645 scientific_name uncultured Duncaniella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544060 SAMEA112433750 165185 uncultured Eubacterium sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433750 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:33Z INSDC last update 2023-02-03T00:49:33Z INSDC status public Submitter Id MGBC163646 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 95.97 completeness software CheckM contamination score 0.67 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163646 scientific_name uncultured Eubacterium sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544061 SAMEA112433751 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433751 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:33Z INSDC last update 2023-02-03T00:49:33Z INSDC status public Submitter Id MGBC163647 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 95.92 completeness software CheckM contamination score 1.82 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163647 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544062 SAMEA112433752 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433752 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:33Z INSDC last update 2023-02-03T00:49:33Z INSDC status public Submitter Id MGBC163648 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 95.83 completeness software CheckM contamination score 1.91 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163648 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544063 SAMEA112433753 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433753 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:33Z INSDC last update 2023-02-03T00:49:33Z INSDC status public Submitter Id MGBC163649 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 95.64 completeness software CheckM contamination score 1.45 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163649 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544064 SAMEA112433754 172733 uncultured Eubacteriales bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433754 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:33Z INSDC last update 2023-02-03T00:49:33Z INSDC status public Submitter Id MGBC163650 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 95.56 completeness software CheckM contamination score 0.27 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163650 scientific_name uncultured Eubacteriales bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544065 SAMEA112433755 2054177 Christensenellaceae bacterium assembly software metaSPAdes_v3.10.1 broad-scale environmental context mouse gut collection date not provided sample derived from SRR12474081 geographic location (longitude) not provided DD binning parameters default parameters, kmer: 4 contamination score 1.66 % ENA-FIRST-PUBLIC 2023-02-03T00:49:33Z ENA-LAST-UPDATE 2023-02-03T00:49:33Z completeness software CheckM geographic location (country and/or sea) USA binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) organism Candidatus Borkfalkiaceae bacterium assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics taxonomic identity marker multi-marker approach completeness score 95.56 % environmental medium Proximal colon geographic location (latitude) not provided DD scientific_name Candidatus Borkfalkiaceae bacterium common name investigation type metagenome-assembled genome local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sequencing method Illumina isolation_source Proximal colon ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 ERS14544066 SAMEA112433756 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433756 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:33Z INSDC last update 2023-02-03T00:49:33Z INSDC status public Submitter Id MGBC163652 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 95.54 completeness software CheckM contamination score 2.13 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163652 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544067 SAMEA112433757 331630 uncultured Erysipelotrichaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433757 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:40Z INSDC last update 2023-02-03T00:49:40Z INSDC status public Submitter Id MGBC163653 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 95.41 completeness software CheckM contamination score 1.73 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163653 scientific_name uncultured Erysipelotrichaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544068 SAMEA112433758 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433758 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:40Z INSDC last update 2023-02-03T00:49:40Z INSDC status public Submitter Id MGBC163654 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 95.34 completeness software CheckM contamination score 0.38 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163654 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544069 SAMEA112433759 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433759 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:40Z INSDC last update 2023-02-03T00:49:40Z INSDC status public Submitter Id MGBC163655 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 95.26 completeness software CheckM contamination score 2.09 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163655 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544070 SAMEA112433760 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433760 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:40Z INSDC last update 2023-02-03T00:49:40Z INSDC status public Submitter Id MGBC163657 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 94.73 completeness software CheckM contamination score 0.95 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163657 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544071 SAMEA112433761 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433761 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:40Z INSDC last update 2023-02-03T00:49:40Z INSDC status public Submitter Id MGBC163658 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 94.44 completeness software CheckM contamination score 1.26 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163658 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544072 SAMEA112433762 172733 uncultured Eubacteriales bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433762 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:40Z INSDC last update 2023-02-03T00:49:40Z INSDC status public Submitter Id MGBC163659 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 94.37 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163659 scientific_name uncultured Eubacteriales bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544073 SAMEA112433763 239935 Akkermansia muciniphila ENA-FIRST-PUBLIC 2023-02-03T00:49:40Z ENA-LAST-UPDATE 2023-02-03T00:49:40Z External Id SAMEA112433763 INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:40Z INSDC last update 2023-02-03T00:49:40Z INSDC status public Submitter Id MGBC163660 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 94.15 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163660 scientific_name Akkermansia muciniphila sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544074 SAMEA112433764 1671927 uncultured Acetatifactor sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433764 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:40Z INSDC last update 2023-02-03T00:49:40Z INSDC status public Submitter Id MGBC163661 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 93.96 completeness software CheckM contamination score 1.91 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163661 scientific_name uncultured Acetatifactor sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544075 SAMEA112433765 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03T00:49:47Z ENA-LAST-UPDATE 2023-02-03T00:49:47Z External Id SAMEA112433765 INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:47Z INSDC last update 2023-02-03T00:49:47Z INSDC status public Submitter Id MGBC163662 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 93.67 completeness software CheckM contamination score 0.32 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163662 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544076 SAMEA112433766 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433766 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:47Z INSDC last update 2023-02-03T00:49:47Z INSDC status public Submitter Id MGBC163663 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 93.65 completeness software CheckM contamination score 1.26 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163663 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544077 SAMEA112433767 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03T00:49:47Z ENA-LAST-UPDATE 2023-02-03T00:49:47Z External Id SAMEA112433767 INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:47Z INSDC last update 2023-02-03T00:49:47Z INSDC status public Submitter Id MGBC163664 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 93.37 completeness software CheckM contamination score 3.27 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163664 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544078 SAMEA112433768 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433768 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:47Z INSDC last update 2023-02-03T00:49:47Z INSDC status public Submitter Id MGBC163665 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 93.03 completeness software CheckM contamination score 0.95 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163665 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544079 SAMEA112433769 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433769 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:47Z INSDC last update 2023-02-03T00:49:47Z INSDC status public Submitter Id MGBC163666 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 92.64 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163666 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544080 SAMEA112433770 876091 uncultured Oscillibacter sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433770 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:47Z INSDC last update 2023-02-03T00:49:47Z INSDC status public Submitter Id MGBC163667 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 92.61 completeness software CheckM contamination score 0.67 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163667 scientific_name uncultured Oscillibacter sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544081 SAMEA112433771 331630 uncultured Erysipelotrichaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433771 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:47Z INSDC last update 2023-02-03T00:49:47Z INSDC status public Submitter Id MGBC163668 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 92.11 completeness software CheckM contamination score 1.73 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163668 scientific_name uncultured Erysipelotrichaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544082 SAMEA112433772 224209 uncultured Bacilli bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433772 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:47Z INSDC last update 2023-02-03T00:49:47Z INSDC status public Submitter Id MGBC163669 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 91.57 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163669 scientific_name uncultured Bacilli bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544083 SAMEA112433773 2321402 uncultured Eggerthellaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433773 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:54Z INSDC last update 2023-02-03T00:49:54Z INSDC status public Submitter Id MGBC163670 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 91.48 completeness software CheckM contamination score 1.84 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163670 scientific_name uncultured Eggerthellaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544084 SAMEA112433774 1671927 uncultured Acetatifactor sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433774 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:54Z INSDC last update 2023-02-03T00:49:54Z INSDC status public Submitter Id MGBC163671 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 91.28 completeness software CheckM contamination score 3.32 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163671 scientific_name uncultured Acetatifactor sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544085 SAMEA112433775 2676055 uncultured Schaedlerella sp. ENA-FIRST-PUBLIC 2023-02-03T00:49:54Z ENA-LAST-UPDATE 2023-02-03T00:49:54Z External Id SAMEA112433775 INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:54Z INSDC last update 2023-02-03T00:49:54Z INSDC status public Submitter Id MGBC163673 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 89.89 completeness software CheckM contamination score 0.88 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163673 scientific_name uncultured Schaedlerella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544086 SAMEA112433776 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433776 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:54Z INSDC last update 2023-02-03T00:49:54Z INSDC status public Submitter Id MGBC163674 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 89.73 completeness software CheckM contamination score 0.57 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163674 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544087 SAMEA112433777 2321402 uncultured Eggerthellaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433777 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:54Z INSDC last update 2023-02-03T00:49:54Z INSDC status public Submitter Id MGBC163675 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 89.41 completeness software CheckM contamination score 2.13 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163675 scientific_name uncultured Eggerthellaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544088 SAMEA112433778 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433778 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:54Z INSDC last update 2023-02-03T00:49:54Z INSDC status public Submitter Id MGBC163676 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 88.93 completeness software CheckM contamination score 0.63 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163676 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544089 SAMEA112433779 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433779 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:54Z INSDC last update 2023-02-03T00:49:54Z INSDC status public Submitter Id MGBC163677 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 88.60 completeness software CheckM contamination score 0.16 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163677 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544090 SAMEA112433780 344338 uncultured Bacillota bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433780 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:54Z INSDC last update 2023-02-03T00:49:54Z INSDC status public Submitter Id MGBC163678 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 88.39 completeness software CheckM contamination score 3.49 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163678 scientific_name uncultured Firmicutes bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544091 SAMEA112433781 331630 uncultured Erysipelotrichaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433781 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:01Z INSDC last update 2023-02-03T00:50:01Z INSDC status public Submitter Id MGBC163679 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 87.42 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163679 scientific_name uncultured Erysipelotrichaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544092 SAMEA112433782 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433782 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:01Z INSDC last update 2023-02-03T00:50:01Z INSDC status public Submitter Id MGBC163680 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 86.78 completeness software CheckM contamination score 0.86 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163680 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544093 SAMEA112433783 707003 uncultured Oscillospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433783 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:01Z INSDC last update 2023-02-03T00:50:01Z INSDC status public Submitter Id MGBC163681 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 85.83 completeness software CheckM contamination score 2.04 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163681 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544094 SAMEA112433784 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433784 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:01Z INSDC last update 2023-02-03T00:50:01Z INSDC status public Submitter Id MGBC163682 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 85.69 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163682 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544095 SAMEA112433785 707003 uncultured Oscillospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433785 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:01Z INSDC last update 2023-02-03T00:50:01Z INSDC status public Submitter Id MGBC163683 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 84.56 completeness software CheckM contamination score 1.01 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163683 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544096 SAMEA112433786 512314 uncultured Roseburia sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433786 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:01Z INSDC last update 2023-02-03T00:50:01Z INSDC status public Submitter Id MGBC163684 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 84.23 completeness software CheckM contamination score 2.09 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163684 scientific_name uncultured Roseburia sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544097 SAMEA112433787 244328 uncultured Clostridia bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433787 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:01Z INSDC last update 2023-02-03T00:50:01Z INSDC status public Submitter Id MGBC163685 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 83.37 completeness software CheckM contamination score 0.78 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163685 scientific_name uncultured Clostridia bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544098 SAMEA112433788 286138 uncultured Dorea sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433788 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:01Z INSDC last update 2023-02-03T00:50:01Z INSDC status public Submitter Id MGBC163686 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 81.87 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163686 scientific_name uncultured Dorea sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544099 SAMEA112433789 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433789 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:09Z INSDC last update 2023-02-03T00:50:09Z INSDC status public Submitter Id MGBC163687 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 81.18 completeness software CheckM contamination score 1.23 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163687 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544100 SAMEA112433790 244328 uncultured Clostridia bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433790 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:09Z INSDC last update 2023-02-03T00:50:09Z INSDC status public Submitter Id MGBC163688 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 81.03 completeness software CheckM contamination score 3.58 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163688 scientific_name uncultured Clostridia bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544101 SAMEA112433791 59620 uncultured Clostridium sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433791 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:09Z INSDC last update 2023-02-03T00:50:09Z INSDC status public Submitter Id MGBC163689 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 81.03 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163689 scientific_name uncultured Clostridium sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544102 SAMEA112433792 244328 uncultured Clostridia bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433792 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:09Z INSDC last update 2023-02-03T00:50:09Z INSDC status public Submitter Id MGBC163690 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 78.90 completeness software CheckM contamination score 2.80 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163690 scientific_name uncultured Clostridia bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544103 SAMEA112433793 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433793 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:09Z INSDC last update 2023-02-03T00:50:09Z INSDC status public Submitter Id MGBC163691 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 78.75 completeness software CheckM contamination score 4.39 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163691 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544104 SAMEA112433794 876091 uncultured Oscillibacter sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433794 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:09Z INSDC last update 2023-02-03T00:50:09Z INSDC status public Submitter Id MGBC163692 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 78.74 completeness software CheckM contamination score 0.67 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163692 scientific_name uncultured Oscillibacter sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544105 SAMEA112433795 1671927 uncultured Acetatifactor sp. ENA-FIRST-PUBLIC 2023-02-03T00:50:09Z ENA-LAST-UPDATE 2023-02-03T00:50:09Z External Id SAMEA112433795 INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:09Z INSDC last update 2023-02-03T00:50:09Z INSDC status public Submitter Id MGBC163693 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 78.58 completeness software CheckM contamination score 0.77 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163693 scientific_name uncultured Acetatifactor sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544106 SAMEA112433796 244328 uncultured Clostridia bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433796 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:09Z INSDC last update 2023-02-03T00:50:09Z INSDC status public Submitter Id MGBC163694 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 76.77 completeness software CheckM contamination score 1.57 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163694 scientific_name uncultured Clostridia bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544107 SAMEA112433797 33959 Lactobacillus johnsonii ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433797 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:17Z INSDC last update 2023-02-03T00:50:17Z INSDC status public Submitter Id MGBC163695 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 74.93 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163695 scientific_name Lactobacillus johnsonii sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544108 SAMEA112433798 286138 uncultured Dorea sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433798 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:17Z INSDC last update 2023-02-03T00:50:17Z INSDC status public Submitter Id MGBC163696 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 74.63 completeness software CheckM contamination score 1.66 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163696 scientific_name uncultured Dorea sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544109 SAMEA112433799 2676055 uncultured Schaedlerella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433799 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:17Z INSDC last update 2023-02-03T00:50:17Z INSDC status public Submitter Id MGBC163697 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 74.12 completeness software CheckM contamination score 0.58 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163697 scientific_name uncultured Schaedlerella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544110 SAMEA112433800 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433800 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:17Z INSDC last update 2023-02-03T00:50:17Z INSDC status public Submitter Id MGBC163698 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 74.07 completeness software CheckM contamination score 1.60 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163698 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544111 SAMEA112433801 286138 uncultured Dorea sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433801 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:17Z INSDC last update 2023-02-03T00:50:17Z INSDC status public Submitter Id MGBC163699 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 71.92 completeness software CheckM contamination score 1.46 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163699 scientific_name uncultured Dorea sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544112 SAMEA112433802 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433802 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:17Z INSDC last update 2023-02-03T00:50:17Z INSDC status public Submitter Id MGBC163700 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 71.83 completeness software CheckM contamination score 1.34 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163700 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544113 SAMEA112433803 2321402 uncultured Eggerthellaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433803 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:17Z INSDC last update 2023-02-03T00:50:17Z INSDC status public Submitter Id MGBC163701 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 71.08 completeness software CheckM contamination score 0.12 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163701 scientific_name uncultured Eggerthellaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544114 SAMEA112433804 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433804 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:17Z INSDC last update 2023-02-03T00:50:17Z INSDC status public Submitter Id MGBC163702 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 70.22 completeness software CheckM contamination score 3.13 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163702 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544115 SAMEA112433805 876091 uncultured Oscillibacter sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433805 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:24Z INSDC last update 2023-02-03T00:50:24Z INSDC status public Submitter Id MGBC163703 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 66.09 completeness software CheckM contamination score 1.01 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163703 scientific_name uncultured Oscillibacter sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544116 SAMEA112433806 224209 uncultured Bacilli bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433806 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:24Z INSDC last update 2023-02-03T00:50:24Z INSDC status public Submitter Id MGBC163704 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 65.63 completeness software CheckM contamination score 2.41 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163704 scientific_name uncultured Bacilli bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544117 SAMEA112433807 286138 uncultured Dorea sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433807 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:24Z INSDC last update 2023-02-03T00:50:24Z INSDC status public Submitter Id MGBC163705 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 64.91 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163705 scientific_name uncultured Dorea sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544118 SAMEA112433808 707003 uncultured Oscillospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433808 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:24Z INSDC last update 2023-02-03T00:50:24Z INSDC status public Submitter Id MGBC163706 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 62.86 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163706 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544119 SAMEA112433809 765821 uncultured Blautia sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433809 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:24Z INSDC last update 2023-02-03T00:50:24Z INSDC status public Submitter Id MGBC163707 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 61.74 completeness software CheckM contamination score 1.71 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163707 scientific_name uncultured Blautia sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544120 SAMEA112433810 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433810 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:24Z INSDC last update 2023-02-03T00:50:24Z INSDC status public Submitter Id MGBC163708 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 59.36 completeness software CheckM contamination score 1.76 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163708 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544121 SAMEA112433811 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433811 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:24Z INSDC last update 2023-02-03T00:50:24Z INSDC status public Submitter Id MGBC163709 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 57.45 completeness software CheckM contamination score 1.29 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163709 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544122 SAMEA112433812 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433812 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:24Z INSDC last update 2023-02-03T00:50:24Z INSDC status public Submitter Id MGBC163710 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 55.89 completeness software CheckM contamination score 0.79 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163710 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544123 SAMEA112433813 286138 uncultured Dorea sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433813 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:32Z INSDC last update 2023-02-03T00:50:32Z INSDC status public Submitter Id MGBC163711 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 55.17 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163711 scientific_name uncultured Dorea sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544124 SAMEA112433814 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433814 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:32Z INSDC last update 2023-02-03T00:50:32Z INSDC status public Submitter Id MGBC163712 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 52.63 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474081 sample name MGBC163712 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544125 SAMEA112433815 1690 Bifidobacterium pseudolongum subsp. globosum ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433815 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:32Z INSDC last update 2023-02-03T00:50:32Z INSDC status public Submitter Id MGBC163713 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.77 completeness software CheckM contamination score 0.81 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474078 sample name MGBC163713 scientific_name Bifidobacterium pseudolongum subsp. globosum sequencing method Illumina taxonomic identity marker multi-marker approach sub_species globosum ERS14544126 SAMEA112433816 2768039 uncultured Duncaniella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433816 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:32Z INSDC last update 2023-02-03T00:50:32Z INSDC status public Submitter Id MGBC163714 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.43 completeness software CheckM contamination score 0.75 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474078 sample name MGBC163714 scientific_name uncultured Duncaniella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544127 SAMEA112433817 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433817 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:32Z INSDC last update 2023-02-03T00:50:32Z INSDC status public Submitter Id MGBC163715 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.43 completeness software CheckM contamination score 0.38 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474078 sample name MGBC163715 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544128 SAMEA112433818 818 Bacteroides thetaiotaomicron ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433818 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:32Z INSDC last update 2023-02-03T00:50:32Z INSDC status public Submitter Id MGBC163716 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.41 completeness software CheckM contamination score 1.86 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474078 sample name MGBC163716 scientific_name Bacteroides thetaiotaomicron sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544129 SAMEA112433819 2768039 uncultured Duncaniella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433819 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:32Z INSDC last update 2023-02-03T00:50:32Z INSDC status public Submitter Id MGBC163717 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.41 completeness software CheckM contamination score 0.88 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474078 sample name MGBC163717 scientific_name uncultured Duncaniella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544130 SAMEA112433820 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433820 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:32Z INSDC last update 2023-02-03T00:50:32Z INSDC status public Submitter Id MGBC163718 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.36 completeness software CheckM contamination score 2.06 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474078 sample name MGBC163718 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544131 SAMEA112433821 59620 uncultured Clostridium sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433821 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:39Z INSDC last update 2023-02-03T00:50:39Z INSDC status public Submitter Id MGBC163719 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.19 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474078 sample name MGBC163719 scientific_name uncultured Clostridium sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544132 SAMEA112433822 2768039 uncultured Duncaniella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433822 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:39Z INSDC last update 2023-02-03T00:50:39Z INSDC status public Submitter Id MGBC163720 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.05 completeness software CheckM contamination score 0.38 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474078 sample name MGBC163720 scientific_name uncultured Duncaniella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544133 SAMEA112433823 538949 uncultured Alistipes sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433823 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:39Z INSDC last update 2023-02-03T00:50:39Z INSDC status public Submitter Id MGBC163721 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.03 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474078 sample name MGBC163721 scientific_name uncultured Alistipes sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544134 SAMEA112433824 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433824 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:39Z INSDC last update 2023-02-03T00:50:39Z INSDC status public Submitter Id MGBC163722 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.85 completeness software CheckM contamination score 0.57 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474078 sample name MGBC163722 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544135 SAMEA112433825 172733 uncultured Eubacteriales bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433825 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:39Z INSDC last update 2023-02-03T00:50:39Z INSDC status public Submitter Id MGBC163723 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.65 completeness software CheckM contamination score 0.67 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474078 sample name MGBC163723 scientific_name uncultured Eubacteriales bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544136 SAMEA112433826 2321402 uncultured Eggerthellaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433826 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:39Z INSDC last update 2023-02-03T00:50:39Z INSDC status public Submitter Id MGBC163724 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.38 completeness software CheckM contamination score 0.48 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474078 sample name MGBC163724 scientific_name uncultured Eggerthellaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544137 SAMEA112433827 487175 Parasutterella excrementihominis ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433827 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:39Z INSDC last update 2023-02-03T00:50:39Z INSDC status public Submitter Id MGBC163725 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.25 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474078 sample name MGBC163725 scientific_name Parasutterella excrementihominis sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544138 SAMEA112433828 33959 Lactobacillus johnsonii ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433828 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:39Z INSDC last update 2023-02-03T00:50:39Z INSDC status public Submitter Id MGBC163726 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.19 completeness software CheckM contamination score 2.23 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474078 sample name MGBC163726 scientific_name Lactobacillus johnsonii sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544139 SAMEA112433829 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433829 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:44Z INSDC last update 2023-02-03T00:50:44Z INSDC status public Submitter Id MGBC163727 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.13 completeness software CheckM contamination score 3.07 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474078 sample name MGBC163727 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544140 SAMEA112433830 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433830 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:44Z INSDC last update 2023-02-03T00:50:44Z INSDC status public Submitter Id MGBC163728 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.08 completeness software CheckM contamination score 1.90 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474078 sample name MGBC163728 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544141 SAMEA112433831 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433831 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:44Z INSDC last update 2023-02-03T00:50:44Z INSDC status public Submitter Id MGBC163729 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.98 completeness software CheckM contamination score 1.83 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474078 sample name MGBC163729 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544142 SAMEA112433832 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433832 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:44Z INSDC last update 2023-02-03T00:50:44Z INSDC status public Submitter Id MGBC163730 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.95 completeness software CheckM contamination score 1.72 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474078 sample name MGBC163730 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544143 SAMEA112433833 239935 Akkermansia muciniphila ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433833 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:44Z INSDC last update 2023-02-03T00:50:44Z INSDC status public Submitter Id MGBC163731 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.95 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474078 sample name MGBC163731 scientific_name Akkermansia muciniphila sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544144 SAMEA112433834 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433834 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:44Z INSDC last update 2023-02-03T00:50:44Z INSDC status public Submitter Id MGBC163732 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.54 completeness software CheckM contamination score 0.38 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474078 sample name MGBC163732 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544145 SAMEA112433835 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433835 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:44Z INSDC last update 2023-02-03T00:50:44Z INSDC status public Submitter Id MGBC163733 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.52 completeness software CheckM contamination score 0.12 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474078 sample name MGBC163733 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544146 SAMEA112433836 172733 uncultured Eubacteriales bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433836 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:44Z INSDC last update 2023-02-03T00:50:44Z INSDC status public Submitter Id MGBC163734 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.31 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474078 sample name MGBC163734 scientific_name uncultured Eubacteriales bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544147 SAMEA112433837 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433837 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:48:58Z INSDC last update 2023-02-03T00:48:58Z INSDC status public Submitter Id MGBC163735 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.30 completeness software CheckM contamination score 1.15 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474078 sample name MGBC163735 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544148 SAMEA112433838 1598 Limosilactobacillus reuteri ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433838 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:48:58Z INSDC last update 2023-02-03T00:48:58Z INSDC status public Submitter Id MGBC163736 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.26 completeness software CheckM contamination score 1.09 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474078 sample name MGBC163736 scientific_name Limosilactobacillus reuteri sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544149 SAMEA112433839 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433839 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:48:58Z INSDC last update 2023-02-03T00:48:58Z INSDC status public Submitter Id MGBC163737 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.11 completeness software CheckM contamination score 0.63 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474078 sample name MGBC163737 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544150 SAMEA112433840 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433840 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:48:58Z INSDC last update 2023-02-03T00:48:58Z INSDC status public Submitter Id MGBC163739 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.85 completeness software CheckM contamination score 1.89 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474078 sample name MGBC163739 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544151 SAMEA112433841 293430 uncultured Ureaplasma sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433841 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:48:58Z INSDC last update 2023-02-03T00:48:58Z INSDC status public Submitter Id MGBC163740 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.53 completeness software CheckM contamination score 2.18 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474078 sample name MGBC163740 scientific_name uncultured Ureaplasma sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544152 SAMEA112433842 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433842 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:48:58Z INSDC last update 2023-02-03T00:48:58Z INSDC status public Submitter Id MGBC163741 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.21 completeness software CheckM contamination score 2.78 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474078 sample name MGBC163741 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544153 SAMEA112433843 172733 uncultured Eubacteriales bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433843 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:48:58Z INSDC last update 2023-02-03T00:48:58Z INSDC status public Submitter Id MGBC163742 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.10 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474078 sample name MGBC163742 scientific_name uncultured Eubacteriales bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544154 SAMEA112433844 1671927 uncultured Acetatifactor sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433844 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:48:58Z INSDC last update 2023-02-03T00:48:58Z INSDC status public Submitter Id MGBC163743 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 95.97 completeness software CheckM contamination score 2.64 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474078 sample name MGBC163743 scientific_name uncultured Acetatifactor sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544155 SAMEA112433845 244328 uncultured Clostridia bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433845 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:05Z INSDC last update 2023-02-03T00:49:05Z INSDC status public Submitter Id MGBC163744 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 95.97 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474078 sample name MGBC163744 scientific_name uncultured Clostridia bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544156 SAMEA112433846 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433846 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:05Z INSDC last update 2023-02-03T00:49:05Z INSDC status public Submitter Id MGBC163745 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 95.84 completeness software CheckM contamination score 1.30 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474078 sample name MGBC163745 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544157 SAMEA112433847 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433847 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:05Z INSDC last update 2023-02-03T00:49:05Z INSDC status public Submitter Id MGBC163746 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 95.56 completeness software CheckM contamination score 0.65 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474078 sample name MGBC163746 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544158 SAMEA112433848 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433848 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:05Z INSDC last update 2023-02-03T00:49:05Z INSDC status public Submitter Id MGBC163747 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 95.09 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474078 sample name MGBC163747 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544159 SAMEA112433849 2054177 Christensenellaceae bacterium assembly software metaSPAdes_v3.10.1 broad-scale environmental context mouse gut collection date not provided sample derived from SRR12474078 geographic location (longitude) not provided DD binning parameters default parameters, kmer: 4 contamination score 0.86 % ENA-FIRST-PUBLIC 2023-02-03T00:49:05Z ENA-LAST-UPDATE 2023-02-03T00:49:05Z completeness software CheckM geographic location (country and/or sea) USA binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) organism Candidatus Borkfalkiaceae bacterium assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics taxonomic identity marker multi-marker approach completeness score 95.02 % environmental medium Proximal colon geographic location (latitude) not provided DD scientific_name Candidatus Borkfalkiaceae bacterium common name investigation type metagenome-assembled genome local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sequencing method Illumina isolation_source Proximal colon ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 ERS14544160 SAMEA112433850 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433850 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:05Z INSDC last update 2023-02-03T00:49:05Z INSDC status public Submitter Id MGBC163749 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 94.71 completeness software CheckM contamination score 2.17 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474078 sample name MGBC163749 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544161 SAMEA112433851 1671927 uncultured Acetatifactor sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433851 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:05Z INSDC last update 2023-02-03T00:49:05Z INSDC status public Submitter Id MGBC163750 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 94.67 completeness software CheckM contamination score 1.91 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474078 sample name MGBC163750 scientific_name uncultured Acetatifactor sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544162 SAMEA112433852 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433852 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:05Z INSDC last update 2023-02-03T00:49:05Z INSDC status public Submitter Id MGBC163751 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 94.41 completeness software CheckM contamination score 2.29 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474078 sample name MGBC163751 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544163 SAMEA112433853 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433853 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:12Z INSDC last update 2023-02-03T00:49:12Z INSDC status public Submitter Id MGBC163753 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 94.18 completeness software CheckM contamination score 2.35 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474078 sample name MGBC163753 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544164 SAMEA112433854 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433854 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:12Z INSDC last update 2023-02-03T00:49:12Z INSDC status public Submitter Id MGBC163754 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 93.61 completeness software CheckM contamination score 2.11 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474078 sample name MGBC163754 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544165 SAMEA112433855 707003 uncultured Oscillospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433855 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:12Z INSDC last update 2023-02-03T00:49:12Z INSDC status public Submitter Id MGBC163755 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 93.28 completeness software CheckM contamination score 2.41 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474078 sample name MGBC163755 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544166 SAMEA112433856 1671927 uncultured Acetatifactor sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433856 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:12Z INSDC last update 2023-02-03T00:49:12Z INSDC status public Submitter Id MGBC163756 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 93.08 completeness software CheckM contamination score 1.75 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474078 sample name MGBC163756 scientific_name uncultured Acetatifactor sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544167 SAMEA112433857 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433857 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:12Z INSDC last update 2023-02-03T00:49:12Z INSDC status public Submitter Id MGBC163757 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 92.51 completeness software CheckM contamination score 1.72 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474078 sample name MGBC163757 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544168 SAMEA112433858 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433858 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:12Z INSDC last update 2023-02-03T00:49:12Z INSDC status public Submitter Id MGBC163758 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 92.45 completeness software CheckM contamination score 3.55 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474078 sample name MGBC163758 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544169 SAMEA112433859 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433859 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:12Z INSDC last update 2023-02-03T00:49:12Z INSDC status public Submitter Id MGBC163759 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 92.33 completeness software CheckM contamination score 1.15 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474078 sample name MGBC163759 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544170 SAMEA112433860 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433860 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:12Z INSDC last update 2023-02-03T00:49:12Z INSDC status public Submitter Id MGBC163760 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 91.30 completeness software CheckM contamination score 0.48 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474078 sample name MGBC163760 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544171 SAMEA112433861 286138 uncultured Dorea sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433861 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:19Z INSDC last update 2023-02-03T00:49:19Z INSDC status public Submitter Id MGBC163761 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 91.23 completeness software CheckM contamination score 1.66 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474078 sample name MGBC163761 scientific_name uncultured Dorea sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544172 SAMEA112433862 2054177 Christensenellaceae bacterium assembly software metaSPAdes_v3.10.1 broad-scale environmental context mouse gut collection date not provided sample derived from SRR12474078 geographic location (longitude) not provided DD binning parameters default parameters, kmer: 4 contamination score 0.03 % ENA-FIRST-PUBLIC 2023-02-03T00:49:19Z ENA-LAST-UPDATE 2023-02-03T00:49:19Z completeness software CheckM geographic location (country and/or sea) USA binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) organism Candidatus Borkfalkiaceae bacterium assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics taxonomic identity marker multi-marker approach completeness score 91.12 % environmental medium Proximal colon geographic location (latitude) not provided DD scientific_name Candidatus Borkfalkiaceae bacterium common name investigation type metagenome-assembled genome local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sequencing method Illumina isolation_source Proximal colon ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 ERS14544173 SAMEA112433863 286138 uncultured Dorea sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433863 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:19Z INSDC last update 2023-02-03T00:49:19Z INSDC status public Submitter Id MGBC163763 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 90.64 completeness software CheckM contamination score 0.97 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474078 sample name MGBC163763 scientific_name uncultured Dorea sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544174 SAMEA112433864 905011 uncultured Anaerotruncus sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433864 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:19Z INSDC last update 2023-02-03T00:49:19Z INSDC status public Submitter Id MGBC163764 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 88.86 completeness software CheckM contamination score 2.57 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474078 sample name MGBC163764 scientific_name uncultured Anaerotruncus sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544175 SAMEA112433865 172733 uncultured Eubacteriales bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433865 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:19Z INSDC last update 2023-02-03T00:49:19Z INSDC status public Submitter Id MGBC163765 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 87.73 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474078 sample name MGBC163765 scientific_name uncultured Eubacteriales bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544176 SAMEA112433866 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433866 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:19Z INSDC last update 2023-02-03T00:49:19Z INSDC status public Submitter Id MGBC163766 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 87.24 completeness software CheckM contamination score 1.72 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474078 sample name MGBC163766 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544177 SAMEA112433867 172733 uncultured Eubacteriales bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433867 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:19Z INSDC last update 2023-02-03T00:49:19Z INSDC status public Submitter Id MGBC163767 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 86.71 completeness software CheckM contamination score 0.40 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474078 sample name MGBC163767 scientific_name uncultured Eubacteriales bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544178 SAMEA112433868 1796620 Acutalibacter muris ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433868 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:19Z INSDC last update 2023-02-03T00:49:19Z INSDC status public Submitter Id MGBC163768 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 86.57 completeness software CheckM contamination score 1.03 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474078 sample name MGBC163768 scientific_name Acutalibacter muris sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544179 SAMEA112433869 224209 uncultured Bacilli bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433869 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:26Z INSDC last update 2023-02-03T00:49:26Z INSDC status public Submitter Id MGBC163769 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 83.89 completeness software CheckM contamination score 1.12 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474078 sample name MGBC163769 scientific_name uncultured Bacilli bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544180 SAMEA112433870 707003 uncultured Oscillospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433870 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:26Z INSDC last update 2023-02-03T00:49:26Z INSDC status public Submitter Id MGBC163770 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 82.19 completeness software CheckM contamination score 1.57 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474078 sample name MGBC163770 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544181 SAMEA112433871 344338 uncultured Bacillota bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433871 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:26Z INSDC last update 2023-02-03T00:49:26Z INSDC status public Submitter Id MGBC163771 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 80.93 completeness software CheckM contamination score 1.62 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474078 sample name MGBC163771 scientific_name uncultured Firmicutes bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544182 SAMEA112433872 1671927 uncultured Acetatifactor sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433872 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:26Z INSDC last update 2023-02-03T00:49:26Z INSDC status public Submitter Id MGBC163772 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 78.39 completeness software CheckM contamination score 2.49 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474078 sample name MGBC163772 scientific_name uncultured Acetatifactor sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544183 SAMEA112433873 2321402 uncultured Eggerthellaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433873 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:26Z INSDC last update 2023-02-03T00:49:26Z INSDC status public Submitter Id MGBC163773 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 76.30 completeness software CheckM contamination score 0.34 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474078 sample name MGBC163773 scientific_name uncultured Eggerthellaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544184 SAMEA112433874 1751881 uncultured Hungatella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433874 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:26Z INSDC last update 2023-02-03T00:49:26Z INSDC status public Submitter Id MGBC163774 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 75.27 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474078 sample name MGBC163774 scientific_name uncultured Hungatella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544185 SAMEA112433875 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433875 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:26Z INSDC last update 2023-02-03T00:49:26Z INSDC status public Submitter Id MGBC163775 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 75.19 completeness software CheckM contamination score 0.95 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474078 sample name MGBC163775 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544186 SAMEA112433876 707003 uncultured Oscillospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433876 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:26Z INSDC last update 2023-02-03T00:49:26Z INSDC status public Submitter Id MGBC163776 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 73.35 completeness software CheckM contamination score 2.35 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474078 sample name MGBC163776 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544187 SAMEA112433877 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433877 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:33Z INSDC last update 2023-02-03T00:49:33Z INSDC status public Submitter Id MGBC163777 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 54.93 completeness software CheckM contamination score 0.19 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474078 sample name MGBC163777 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544188 SAMEA112433878 1690 Bifidobacterium pseudolongum subsp. globosum ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433878 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:33Z INSDC last update 2023-02-03T00:49:33Z INSDC status public Submitter Id MGBC163778 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.77 completeness software CheckM contamination score 0.44 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474074 sample name MGBC163778 scientific_name Bifidobacterium pseudolongum subsp. globosum sequencing method Illumina taxonomic identity marker multi-marker approach sub_species globosum ERS14544189 SAMEA112433879 2768039 uncultured Duncaniella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433879 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:33Z INSDC last update 2023-02-03T00:49:33Z INSDC status public Submitter Id MGBC163779 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.43 completeness software CheckM contamination score 1.51 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474074 sample name MGBC163779 scientific_name uncultured Duncaniella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544190 SAMEA112433880 2768039 uncultured Duncaniella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433880 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:33Z INSDC last update 2023-02-03T00:49:33Z INSDC status public Submitter Id MGBC163780 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.43 completeness software CheckM contamination score 0.38 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474074 sample name MGBC163780 scientific_name uncultured Duncaniella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544191 SAMEA112433881 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433881 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:33Z INSDC last update 2023-02-03T00:49:33Z INSDC status public Submitter Id MGBC163781 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.43 completeness software CheckM contamination score 0.75 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474074 sample name MGBC163781 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544192 SAMEA112433882 818 Bacteroides thetaiotaomicron ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433882 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:33Z INSDC last update 2023-02-03T00:49:33Z INSDC status public Submitter Id MGBC163782 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.41 completeness software CheckM contamination score 0.57 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474074 sample name MGBC163782 scientific_name Bacteroides thetaiotaomicron sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544193 SAMEA112433883 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433883 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:33Z INSDC last update 2023-02-03T00:49:33Z INSDC status public Submitter Id MGBC163783 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.36 completeness software CheckM contamination score 0.95 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474074 sample name MGBC163783 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544194 SAMEA112433884 2321400 uncultured Atopobiaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433884 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:33Z INSDC last update 2023-02-03T00:49:33Z INSDC status public Submitter Id MGBC163784 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.19 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474074 sample name MGBC163784 scientific_name uncultured Atopobiaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544195 SAMEA112433885 331630 uncultured Erysipelotrichaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433885 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:40Z INSDC last update 2023-02-03T00:49:40Z INSDC status public Submitter Id MGBC163785 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.05 completeness software CheckM contamination score 2.87 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474074 sample name MGBC163785 scientific_name uncultured Erysipelotrichaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544196 SAMEA112433886 538949 uncultured Alistipes sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433886 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:40Z INSDC last update 2023-02-03T00:49:40Z INSDC status public Submitter Id MGBC163786 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.03 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474074 sample name MGBC163786 scientific_name uncultured Alistipes sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544197 SAMEA112433887 33959 Lactobacillus johnsonii ENA-FIRST-PUBLIC 2023-02-03T00:49:40Z ENA-LAST-UPDATE 2023-02-03T00:49:40Z External Id SAMEA112433887 INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:40Z INSDC last update 2023-02-03T00:49:40Z INSDC status public Submitter Id MGBC163787 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.96 completeness software CheckM contamination score 1.87 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474074 sample name MGBC163787 scientific_name Lactobacillus johnsonii sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544198 SAMEA112433888 446043 uncultured Lachnospira sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433888 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:40Z INSDC last update 2023-02-03T00:49:40Z INSDC status public Submitter Id MGBC163788 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.65 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474074 sample name MGBC163788 scientific_name uncultured Lachnospira sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544199 SAMEA112433889 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433889 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:40Z INSDC last update 2023-02-03T00:49:40Z INSDC status public Submitter Id MGBC163789 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.41 completeness software CheckM contamination score 1.58 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474074 sample name MGBC163789 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544200 SAMEA112433890 59620 uncultured Clostridium sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433890 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:40Z INSDC last update 2023-02-03T00:49:40Z INSDC status public Submitter Id MGBC163790 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.31 completeness software CheckM contamination score 0.09 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474074 sample name MGBC163790 scientific_name uncultured Clostridium sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544201 SAMEA112433891 2094150 Duncaniella muris ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433891 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:40Z INSDC last update 2023-02-03T00:49:40Z INSDC status public Submitter Id MGBC163791 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.30 completeness software CheckM contamination score 0.38 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474074 sample name MGBC163791 scientific_name Duncaniella muris sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544202 SAMEA112433892 1729681 uncultured Faecalibaculum sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433892 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:40Z INSDC last update 2023-02-03T00:49:40Z INSDC status public Submitter Id MGBC163792 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.11 completeness software CheckM contamination score 2.29 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474074 sample name MGBC163792 scientific_name uncultured Faecalibaculum sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544203 SAMEA112433893 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433893 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:47Z INSDC last update 2023-02-03T00:49:47Z INSDC status public Submitter Id MGBC163793 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.64 completeness software CheckM contamination score 0.50 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474074 sample name MGBC163793 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544204 SAMEA112433894 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433894 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:47Z INSDC last update 2023-02-03T00:49:47Z INSDC status public Submitter Id MGBC163794 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.54 completeness software CheckM contamination score 0.38 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474074 sample name MGBC163794 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544205 SAMEA112433895 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433895 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:47Z INSDC last update 2023-02-03T00:49:47Z INSDC status public Submitter Id MGBC163795 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.52 completeness software CheckM contamination score 1.13 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474074 sample name MGBC163795 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544206 SAMEA112433896 244328 uncultured Clostridia bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433896 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:47Z INSDC last update 2023-02-03T00:49:47Z INSDC status public Submitter Id MGBC163796 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.31 completeness software CheckM contamination score 0.17 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474074 sample name MGBC163796 scientific_name uncultured Clostridia bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544207 SAMEA112433897 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433897 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:47Z INSDC last update 2023-02-03T00:49:47Z INSDC status public Submitter Id MGBC163797 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.16 completeness software CheckM contamination score 0.38 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474074 sample name MGBC163797 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544208 SAMEA112433898 172733 uncultured Eubacteriales bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433898 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:47Z INSDC last update 2023-02-03T00:49:47Z INSDC status public Submitter Id MGBC163798 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.64 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474074 sample name MGBC163798 scientific_name uncultured Eubacteriales bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544209 SAMEA112433899 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433899 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:47Z INSDC last update 2023-02-03T00:49:47Z INSDC status public Submitter Id MGBC163799 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.29 completeness software CheckM contamination score 0.57 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474074 sample name MGBC163799 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544210 SAMEA112433900 1751881 uncultured Hungatella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433900 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:47Z INSDC last update 2023-02-03T00:49:47Z INSDC status public Submitter Id MGBC163800 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 95.99 completeness software CheckM contamination score 1.11 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474074 sample name MGBC163800 scientific_name uncultured Hungatella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544211 SAMEA112433901 707003 uncultured Oscillospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433901 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:54Z INSDC last update 2023-02-03T00:49:54Z INSDC status public Submitter Id MGBC163801 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 95.30 completeness software CheckM contamination score 0.00 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474074 sample name MGBC163801 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544212 SAMEA112433902 165185 uncultured Eubacterium sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433902 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:54Z INSDC last update 2023-02-03T00:49:54Z INSDC status public Submitter Id MGBC163802 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 95.28 completeness software CheckM contamination score 1.38 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474074 sample name MGBC163802 scientific_name uncultured Eubacterium sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544213 SAMEA112433903 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433903 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:54Z INSDC last update 2023-02-03T00:49:54Z INSDC status public Submitter Id MGBC163803 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 95.00 completeness software CheckM contamination score 2.06 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474074 sample name MGBC163803 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544214 SAMEA112433904 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433904 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:54Z INSDC last update 2023-02-03T00:49:54Z INSDC status public Submitter Id MGBC163804 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 94.15 completeness software CheckM contamination score 1.26 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474074 sample name MGBC163804 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544215 SAMEA112433905 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433905 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:54Z INSDC last update 2023-02-03T00:49:54Z INSDC status public Submitter Id MGBC163805 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 94.02 completeness software CheckM contamination score 0.45 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474074 sample name MGBC163805 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544216 SAMEA112433906 487175 Parasutterella excrementihominis ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433906 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:54Z INSDC last update 2023-02-03T00:49:54Z INSDC status public Submitter Id MGBC163806 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 93.98 completeness software CheckM contamination score 1.56 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474074 sample name MGBC163806 scientific_name Parasutterella excrementihominis sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544217 SAMEA112433907 1796620 Acutalibacter muris ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433907 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:54Z INSDC last update 2023-02-03T00:49:54Z INSDC status public Submitter Id MGBC163807 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 93.17 completeness software CheckM contamination score 2.07 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474074 sample name MGBC163807 scientific_name Acutalibacter muris sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544218 SAMEA112433908 286138 uncultured Dorea sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433908 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:54Z INSDC last update 2023-02-03T00:49:54Z INSDC status public Submitter Id MGBC163808 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 91.38 completeness software CheckM contamination score 1.66 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474074 sample name MGBC163808 scientific_name uncultured Dorea sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544219 SAMEA112433909 2054177 Christensenellaceae bacterium assembly software metaSPAdes_v3.10.1 broad-scale environmental context mouse gut collection date not provided sample derived from SRR12474074 geographic location (longitude) not provided DD binning parameters default parameters, kmer: 4 contamination score 0.97 % ENA-FIRST-PUBLIC 2023-02-03T00:50:01Z ENA-LAST-UPDATE 2023-02-03T00:50:01Z completeness software CheckM geographic location (country and/or sea) USA binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) organism Candidatus Borkfalkiaceae bacterium assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics taxonomic identity marker multi-marker approach completeness score 90.59 % environmental medium Distal colon geographic location (latitude) not provided DD scientific_name Candidatus Borkfalkiaceae bacterium common name investigation type metagenome-assembled genome local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sequencing method Illumina isolation_source Distal colon ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 ERS14544220 SAMEA112433910 286138 uncultured Dorea sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433910 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:01Z INSDC last update 2023-02-03T00:50:01Z INSDC status public Submitter Id MGBC163810 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 88.30 completeness software CheckM contamination score 0.88 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474074 sample name MGBC163810 scientific_name uncultured Dorea sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544221 SAMEA112433911 165185 uncultured Eubacterium sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433911 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:01Z INSDC last update 2023-02-03T00:50:01Z INSDC status public Submitter Id MGBC163811 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 88.25 completeness software CheckM contamination score 1.34 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474074 sample name MGBC163811 scientific_name uncultured Eubacterium sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544222 SAMEA112433912 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433912 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:01Z INSDC last update 2023-02-03T00:50:01Z INSDC status public Submitter Id MGBC163812 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 87.36 completeness software CheckM contamination score 1.82 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474074 sample name MGBC163812 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544223 SAMEA112433913 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433913 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:01Z INSDC last update 2023-02-03T00:50:01Z INSDC status public Submitter Id MGBC163813 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 85.13 completeness software CheckM contamination score 4.50 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474074 sample name MGBC163813 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544224 SAMEA112433914 69824 Thomasclavelia cocleata ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433914 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:01Z INSDC last update 2023-02-03T00:50:01Z INSDC status public Submitter Id MGBC163814 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 84.90 completeness software CheckM contamination score 0.31 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474074 sample name MGBC163814 scientific_name [Clostridium] cocleatum sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544225 SAMEA112433915 2321402 uncultured Eggerthellaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433915 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:01Z INSDC last update 2023-02-03T00:50:01Z INSDC status public Submitter Id MGBC163815 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 84.12 completeness software CheckM contamination score 2.02 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474074 sample name MGBC163815 scientific_name uncultured Eggerthellaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544226 SAMEA112433916 286138 uncultured Dorea sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433916 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:01Z INSDC last update 2023-02-03T00:50:01Z INSDC status public Submitter Id MGBC163816 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 83.04 completeness software CheckM contamination score 3.90 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474074 sample name MGBC163816 scientific_name uncultured Dorea sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544227 SAMEA112433917 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433917 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:10Z INSDC last update 2023-02-03T00:50:10Z INSDC status public Submitter Id MGBC163817 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 82.78 completeness software CheckM contamination score 0.63 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474074 sample name MGBC163817 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544228 SAMEA112433918 707003 uncultured Oscillospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433918 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:10Z INSDC last update 2023-02-03T00:50:10Z INSDC status public Submitter Id MGBC163818 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 79.38 completeness software CheckM contamination score 1.57 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474074 sample name MGBC163818 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544229 SAMEA112433919 244328 uncultured Clostridia bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433919 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:10Z INSDC last update 2023-02-03T00:50:10Z INSDC status public Submitter Id MGBC163819 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 78.90 completeness software CheckM contamination score 2.80 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474074 sample name MGBC163819 scientific_name uncultured Clostridia bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544230 SAMEA112433920 2676055 uncultured Schaedlerella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433920 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:10Z INSDC last update 2023-02-03T00:50:10Z INSDC status public Submitter Id MGBC163820 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 77.80 completeness software CheckM contamination score 1.36 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474074 sample name MGBC163820 scientific_name uncultured Schaedlerella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544231 SAMEA112433921 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433921 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:10Z INSDC last update 2023-02-03T00:50:10Z INSDC status public Submitter Id MGBC163821 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 77.30 completeness software CheckM contamination score 0.86 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474074 sample name MGBC163821 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544232 SAMEA112433922 707003 uncultured Oscillospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433922 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:10Z INSDC last update 2023-02-03T00:50:10Z INSDC status public Submitter Id MGBC163822 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 76.56 completeness software CheckM contamination score 0.81 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474074 sample name MGBC163822 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544233 SAMEA112433923 1671927 uncultured Acetatifactor sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433923 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:10Z INSDC last update 2023-02-03T00:50:10Z INSDC status public Submitter Id MGBC163823 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 74.25 completeness software CheckM contamination score 2.22 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474074 sample name MGBC163823 scientific_name uncultured Acetatifactor sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544234 SAMEA112433924 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433924 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:10Z INSDC last update 2023-02-03T00:50:10Z INSDC status public Submitter Id MGBC163824 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 72.52 completeness software CheckM contamination score 3.22 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474074 sample name MGBC163824 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544235 SAMEA112433925 224209 uncultured Bacilli bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433925 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:17Z INSDC last update 2023-02-03T00:50:17Z INSDC status public Submitter Id MGBC163825 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 68.53 completeness software CheckM contamination score 1.12 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474074 sample name MGBC163825 scientific_name uncultured Bacilli bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544236 SAMEA112433926 244328 uncultured Clostridia bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433926 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:17Z INSDC last update 2023-02-03T00:50:17Z INSDC status public Submitter Id MGBC163826 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 63.92 completeness software CheckM contamination score 2.74 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474074 sample name MGBC163826 scientific_name uncultured Clostridia bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544237 SAMEA112433927 707003 uncultured Oscillospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433927 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:17Z INSDC last update 2023-02-03T00:50:17Z INSDC status public Submitter Id MGBC163827 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 61.73 completeness software CheckM contamination score 1.68 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474074 sample name MGBC163827 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544238 SAMEA112433928 239935 Akkermansia muciniphila ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433928 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:17Z INSDC last update 2023-02-03T00:50:17Z INSDC status public Submitter Id MGBC163828 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 50.64 completeness software CheckM contamination score 0.04 environmental medium Distal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Distal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474074 sample name MGBC163828 scientific_name Akkermansia muciniphila sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544239 SAMEA112433929 331630 uncultured Erysipelotrichaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433929 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:17Z INSDC last update 2023-02-03T00:50:17Z INSDC status public Submitter Id MGBC163829 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 100 completeness software CheckM contamination score 1.08 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163829 scientific_name uncultured Erysipelotrichaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544240 SAMEA112433930 2321402 uncultured Eggerthellaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433930 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:17Z INSDC last update 2023-02-03T00:50:17Z INSDC status public Submitter Id MGBC163830 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 100 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163830 scientific_name uncultured Eggerthellaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544241 SAMEA112433931 331630 uncultured Erysipelotrichaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433931 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:17Z INSDC last update 2023-02-03T00:50:17Z INSDC status public Submitter Id MGBC163831 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 100 completeness software CheckM contamination score 1.26 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163831 scientific_name uncultured Erysipelotrichaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544242 SAMEA112433932 487175 Parasutterella excrementihominis ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433932 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:17Z INSDC last update 2023-02-03T00:50:17Z INSDC status public Submitter Id MGBC163832 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 100 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163832 scientific_name Parasutterella excrementihominis sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544243 SAMEA112433933 2321402 uncultured Eggerthellaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433933 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:24Z INSDC last update 2023-02-03T00:50:24Z INSDC status public Submitter Id MGBC163833 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.88 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163833 scientific_name uncultured Eggerthellaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544244 SAMEA112433934 1690 Bifidobacterium pseudolongum subsp. globosum ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433934 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:24Z INSDC last update 2023-02-03T00:50:24Z INSDC status public Submitter Id MGBC163834 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.77 completeness software CheckM contamination score 1.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163834 scientific_name Bifidobacterium pseudolongum subsp. globosum sequencing method Illumina taxonomic identity marker multi-marker approach sub_species globosum ERS14544245 SAMEA112433935 2282419 Staphylococcus pseudoxylosus ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433935 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:24Z INSDC last update 2023-02-03T00:50:24Z INSDC status public Submitter Id MGBC163835 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.44 completeness software CheckM contamination score 1.39 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163835 scientific_name Staphylococcus pseudoxylosus sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544246 SAMEA112433936 2768039 uncultured Duncaniella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433936 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:24Z INSDC last update 2023-02-03T00:50:24Z INSDC status public Submitter Id MGBC163837 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.43 completeness software CheckM contamination score 0.38 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163837 scientific_name uncultured Duncaniella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544247 SAMEA112433937 818 Bacteroides thetaiotaomicron ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433937 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:24Z INSDC last update 2023-02-03T00:50:24Z INSDC status public Submitter Id MGBC163838 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.41 completeness software CheckM contamination score 0.59 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163838 scientific_name Bacteroides thetaiotaomicron sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544248 SAMEA112433938 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433938 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:24Z INSDC last update 2023-02-03T00:50:24Z INSDC status public Submitter Id MGBC163839 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.36 completeness software CheckM contamination score 2.21 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163839 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544249 SAMEA112433939 2321400 uncultured Atopobiaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433939 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:24Z INSDC last update 2023-02-03T00:50:24Z INSDC status public Submitter Id MGBC163840 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.19 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163840 scientific_name uncultured Atopobiaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544250 SAMEA112433940 59620 uncultured Clostridium sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433940 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:24Z INSDC last update 2023-02-03T00:50:24Z INSDC status public Submitter Id MGBC163841 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.19 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163841 scientific_name uncultured Clostridium sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544251 SAMEA112433941 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433941 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:32Z INSDC last update 2023-02-03T00:50:32Z INSDC status public Submitter Id MGBC163842 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.10 completeness software CheckM contamination score 3.58 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163842 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544252 SAMEA112433942 69824 Thomasclavelia cocleata ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433942 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:32Z INSDC last update 2023-02-03T00:50:32Z INSDC status public Submitter Id MGBC163843 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.05 completeness software CheckM contamination score 0.47 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163843 scientific_name [Clostridium] cocleatum sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544253 SAMEA112433943 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433943 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:32Z INSDC last update 2023-02-03T00:50:32Z INSDC status public Submitter Id MGBC163844 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.05 completeness software CheckM contamination score 0.38 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163844 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544254 SAMEA112433944 538949 uncultured Alistipes sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433944 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:32Z INSDC last update 2023-02-03T00:50:32Z INSDC status public Submitter Id MGBC163845 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 99.03 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163845 scientific_name uncultured Alistipes sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544255 SAMEA112433945 33959 Lactobacillus johnsonii ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433945 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:32Z INSDC last update 2023-02-03T00:50:32Z INSDC status public Submitter Id MGBC163846 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.96 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163846 scientific_name Lactobacillus johnsonii sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544256 SAMEA112433946 2768039 uncultured Duncaniella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433946 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:32Z INSDC last update 2023-02-03T00:50:32Z INSDC status public Submitter Id MGBC163847 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.67 completeness software CheckM contamination score 0.75 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163847 scientific_name uncultured Duncaniella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544257 SAMEA112433947 658266 uncultured Anaeroplasmataceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433947 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:32Z INSDC last update 2023-02-03T00:50:32Z INSDC status public Submitter Id MGBC163848 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.66 completeness software CheckM contamination score 1.44 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163848 scientific_name uncultured Anaeroplasmataceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544258 SAMEA112433948 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433948 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:32Z INSDC last update 2023-02-03T00:50:32Z INSDC status public Submitter Id MGBC163849 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.41 completeness software CheckM contamination score 0.95 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163849 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544259 SAMEA112433949 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433949 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:39Z INSDC last update 2023-02-03T00:50:39Z INSDC status public Submitter Id MGBC163850 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.30 completeness software CheckM contamination score 0.38 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163850 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544260 SAMEA112433950 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433950 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:39Z INSDC last update 2023-02-03T00:50:39Z INSDC status public Submitter Id MGBC163851 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 98.27 completeness software CheckM contamination score 2.59 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163851 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544261 SAMEA112433951 239935 Akkermansia muciniphila ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433951 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:39Z INSDC last update 2023-02-03T00:50:39Z INSDC status public Submitter Id MGBC163853 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.95 completeness software CheckM contamination score 3.98 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163853 scientific_name Akkermansia muciniphila sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544262 SAMEA112433952 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433952 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:39Z INSDC last update 2023-02-03T00:50:39Z INSDC status public Submitter Id MGBC163854 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.32 completeness software CheckM contamination score 0.63 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163854 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544263 SAMEA112433953 244328 uncultured Clostridia bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433953 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:39Z INSDC last update 2023-02-03T00:50:39Z INSDC status public Submitter Id MGBC163855 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.31 completeness software CheckM contamination score 0.67 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163855 scientific_name uncultured Clostridia bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544264 SAMEA112433954 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433954 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:39Z INSDC last update 2023-02-03T00:50:39Z INSDC status public Submitter Id MGBC163856 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 97.12 completeness software CheckM contamination score 0.57 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163856 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544265 SAMEA112433955 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433955 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:39Z INSDC last update 2023-02-03T00:50:39Z INSDC status public Submitter Id MGBC163857 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.83 completeness software CheckM contamination score 1.26 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163857 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544266 SAMEA112433956 707003 uncultured Oscillospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433956 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:39Z INSDC last update 2023-02-03T00:50:39Z INSDC status public Submitter Id MGBC163858 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.64 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163858 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544267 SAMEA112433957 1751881 uncultured Hungatella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433957 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:44Z INSDC last update 2023-02-03T00:50:44Z INSDC status public Submitter Id MGBC163859 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.62 completeness software CheckM contamination score 1.07 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163859 scientific_name uncultured Hungatella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544268 SAMEA112433958 1671927 uncultured Acetatifactor sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433958 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:44Z INSDC last update 2023-02-03T00:50:44Z INSDC status public Submitter Id MGBC163860 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.45 completeness software CheckM contamination score 1.26 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163860 scientific_name uncultured Acetatifactor sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544269 SAMEA112433959 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433959 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:44Z INSDC last update 2023-02-03T00:50:44Z INSDC status public Submitter Id MGBC163861 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.42 completeness software CheckM contamination score 3.69 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163861 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544270 SAMEA112433960 707003 uncultured Oscillospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433960 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:44Z INSDC last update 2023-02-03T00:50:44Z INSDC status public Submitter Id MGBC163862 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.42 completeness software CheckM contamination score 0.67 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163862 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544271 SAMEA112433961 2094150 Duncaniella muris ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433961 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:44Z INSDC last update 2023-02-03T00:50:44Z INSDC status public Submitter Id MGBC163863 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.41 completeness software CheckM contamination score 0.38 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163863 scientific_name Duncaniella muris sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544272 SAMEA112433962 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433962 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:44Z INSDC last update 2023-02-03T00:50:44Z INSDC status public Submitter Id MGBC163864 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 96.09 completeness software CheckM contamination score 2.25 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163864 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544273 SAMEA112433963 446043 uncultured Lachnospira sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433963 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:44Z INSDC last update 2023-02-03T00:50:44Z INSDC status public Submitter Id MGBC163865 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 95.97 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163865 scientific_name uncultured Lachnospira sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544274 SAMEA112433964 1796620 Acutalibacter muris ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433964 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:50:44Z INSDC last update 2023-02-03T00:50:44Z INSDC status public Submitter Id MGBC163866 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 95.63 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163866 scientific_name Acutalibacter muris sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544275 SAMEA112433965 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433965 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:48:58Z INSDC last update 2023-02-03T00:48:58Z INSDC status public Submitter Id MGBC163867 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 95.59 completeness software CheckM contamination score 3.03 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163867 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544276 SAMEA112433966 2054177 Christensenellaceae bacterium assembly software metaSPAdes_v3.10.1 broad-scale environmental context mouse gut collection date not provided sample derived from SRR12474087 geographic location (longitude) not provided DD binning parameters default parameters, kmer: 4 contamination score 0.86 % ENA-FIRST-PUBLIC 2023-02-03T00:48:58Z ENA-LAST-UPDATE 2023-02-03T00:48:58Z completeness software CheckM geographic location (country and/or sea) USA binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) organism Candidatus Borkfalkiaceae bacterium assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics taxonomic identity marker multi-marker approach completeness score 95.56 % environmental medium Proximal colon geographic location (latitude) not provided DD scientific_name Candidatus Borkfalkiaceae bacterium common name investigation type metagenome-assembled genome local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sequencing method Illumina isolation_source Proximal colon ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 ERS14544277 SAMEA112433967 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433967 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:48:58Z INSDC last update 2023-02-03T00:48:58Z INSDC status public Submitter Id MGBC163869 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 95.33 completeness software CheckM contamination score 3.07 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163869 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544279 SAMEA112433969 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433969 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:48:58Z INSDC last update 2023-02-03T00:48:58Z INSDC status public Submitter Id MGBC163871 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 94.65 completeness software CheckM contamination score 2.26 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163871 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544280 SAMEA112433970 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433970 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:48:58Z INSDC last update 2023-02-03T00:48:58Z INSDC status public Submitter Id MGBC163872 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 94.62 completeness software CheckM contamination score 2.97 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163872 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544281 SAMEA112433971 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433971 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:48:58Z INSDC last update 2023-02-03T00:48:58Z INSDC status public Submitter Id MGBC163873 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 94.30 completeness software CheckM contamination score 0.16 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163873 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544282 SAMEA112433972 1229255 uncultured Christensenellaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433972 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:48:58Z INSDC last update 2023-02-03T00:48:58Z INSDC status public Submitter Id MGBC163874 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 93.53 completeness software CheckM contamination score 2.10 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163874 scientific_name uncultured Christensenellaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544283 SAMEA112433973 1937011 uncultured Dubosiella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433973 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:05Z INSDC last update 2023-02-03T00:49:05Z INSDC status public Submitter Id MGBC163875 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 93.34 completeness software CheckM contamination score 2.56 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163875 scientific_name uncultured Dubosiella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544284 SAMEA112433974 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433974 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:05Z INSDC last update 2023-02-03T00:49:05Z INSDC status public Submitter Id MGBC163876 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 90.87 completeness software CheckM contamination score 2.82 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163876 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544285 SAMEA112433975 2676055 uncultured Schaedlerella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433975 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:05Z INSDC last update 2023-02-03T00:49:05Z INSDC status public Submitter Id MGBC163877 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 89.88 completeness software CheckM contamination score 0.19 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163877 scientific_name uncultured Schaedlerella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544286 SAMEA112433976 165185 uncultured Eubacterium sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433976 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:05Z INSDC last update 2023-02-03T00:49:05Z INSDC status public Submitter Id MGBC163878 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 89.54 completeness software CheckM contamination score 2.15 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163878 scientific_name uncultured Eubacterium sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544287 SAMEA112433977 707003 uncultured Oscillospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433977 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:05Z INSDC last update 2023-02-03T00:49:05Z INSDC status public Submitter Id MGBC163879 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 88.92 completeness software CheckM contamination score 3.49 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163879 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544288 SAMEA112433978 286138 uncultured Dorea sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433978 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:05Z INSDC last update 2023-02-03T00:49:05Z INSDC status public Submitter Id MGBC163880 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 88.30 completeness software CheckM contamination score 2.27 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163880 scientific_name uncultured Dorea sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544289 SAMEA112433979 2054177 Christensenellaceae bacterium assembly software metaSPAdes_v3.10.1 broad-scale environmental context mouse gut collection date not provided sample derived from SRR12474087 geographic location (longitude) not provided DD binning parameters default parameters, kmer: 4 contamination score 1.44 % ENA-FIRST-PUBLIC 2023-02-03T00:49:05Z ENA-LAST-UPDATE 2023-02-03T00:49:05Z completeness software CheckM geographic location (country and/or sea) USA binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) organism Candidatus Borkfalkiaceae bacterium assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics taxonomic identity marker multi-marker approach completeness score 87.35 % environmental medium Proximal colon geographic location (latitude) not provided DD scientific_name Candidatus Borkfalkiaceae bacterium common name investigation type metagenome-assembled genome local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sequencing method Illumina isolation_source Proximal colon ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 ERS14544290 SAMEA112433980 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433980 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:05Z INSDC last update 2023-02-03T00:49:05Z INSDC status public Submitter Id MGBC163882 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 87.24 completeness software CheckM contamination score 1.15 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163882 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544291 SAMEA112433981 344338 uncultured Bacillota bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433981 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:12Z INSDC last update 2023-02-03T00:49:12Z INSDC status public Submitter Id MGBC163883 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 87.24 completeness software CheckM contamination score 0.90 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163883 scientific_name uncultured Firmicutes bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544292 SAMEA112433982 1671927 uncultured Acetatifactor sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433982 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:12Z INSDC last update 2023-02-03T00:49:12Z INSDC status public Submitter Id MGBC163884 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 85.99 completeness software CheckM contamination score 2.54 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163884 scientific_name uncultured Acetatifactor sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544293 SAMEA112433983 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433983 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:12Z INSDC last update 2023-02-03T00:49:12Z INSDC status public Submitter Id MGBC163885 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 85.06 completeness software CheckM contamination score 0.74 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163885 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544294 SAMEA112433984 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433984 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:12Z INSDC last update 2023-02-03T00:49:12Z INSDC status public Submitter Id MGBC163886 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 84.91 completeness software CheckM contamination score 1.69 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163886 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544295 SAMEA112433985 286138 uncultured Dorea sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433985 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:12Z INSDC last update 2023-02-03T00:49:12Z INSDC status public Submitter Id MGBC163887 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 84.70 completeness software CheckM contamination score 2.10 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163887 scientific_name uncultured Dorea sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544278 SAMEA112433968 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433968 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:48:58Z INSDC last update 2023-02-03T00:48:58Z INSDC status public Submitter Id MGBC163870 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 94.88 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163870 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544296 SAMEA112433986 244328 uncultured Clostridia bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433986 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:12Z INSDC last update 2023-02-03T00:49:12Z INSDC status public Submitter Id MGBC163888 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 83.71 completeness software CheckM contamination score 4.14 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163888 scientific_name uncultured Clostridia bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544297 SAMEA112433987 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433987 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:12Z INSDC last update 2023-02-03T00:49:12Z INSDC status public Submitter Id MGBC163889 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 83.52 completeness software CheckM contamination score 2.11 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163889 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544298 SAMEA112433988 2676055 uncultured Schaedlerella sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433988 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:12Z INSDC last update 2023-02-03T00:49:12Z INSDC status public Submitter Id MGBC163890 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 83.01 completeness software CheckM contamination score 1.74 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163890 scientific_name uncultured Schaedlerella sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544299 SAMEA112433989 875803 uncultured Adlercreutzia sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433989 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:19Z INSDC last update 2023-02-03T00:49:19Z INSDC status public Submitter Id MGBC163891 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 81.95 completeness software CheckM contamination score 1.83 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163891 scientific_name uncultured Adlercreutzia sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544300 SAMEA112433990 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433990 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:19Z INSDC last update 2023-02-03T00:49:19Z INSDC status public Submitter Id MGBC163892 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 81.60 completeness software CheckM contamination score 0.89 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163892 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544301 SAMEA112433991 172733 uncultured Eubacteriales bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433991 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:19Z INSDC last update 2023-02-03T00:49:19Z INSDC status public Submitter Id MGBC163893 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 81.22 completeness software CheckM contamination score 0.89 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163893 scientific_name uncultured Eubacteriales bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544302 SAMEA112433992 165185 uncultured Eubacterium sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433992 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:19Z INSDC last update 2023-02-03T00:49:19Z INSDC status public Submitter Id MGBC163894 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 80.89 completeness software CheckM contamination score 1.61 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163894 scientific_name uncultured Eubacterium sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544303 SAMEA112433993 1671927 uncultured Acetatifactor sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433993 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:19Z INSDC last update 2023-02-03T00:49:19Z INSDC status public Submitter Id MGBC163895 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 79.42 completeness software CheckM contamination score 1.58 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163895 scientific_name uncultured Acetatifactor sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544304 SAMEA112433994 244328 uncultured Clostridia bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433994 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:19Z INSDC last update 2023-02-03T00:49:19Z INSDC status public Submitter Id MGBC163896 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 78.90 completeness software CheckM contamination score 2.80 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163896 scientific_name uncultured Clostridia bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544305 SAMEA112433995 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433995 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:19Z INSDC last update 2023-02-03T00:49:19Z INSDC status public Submitter Id MGBC163897 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 78.61 completeness software CheckM contamination score 1.72 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163897 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544306 SAMEA112433996 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433996 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:19Z INSDC last update 2023-02-03T00:49:19Z INSDC status public Submitter Id MGBC163898 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 78.09 completeness software CheckM contamination score 1.15 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163898 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544307 SAMEA112433997 244328 uncultured Clostridia bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433997 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:26Z INSDC last update 2023-02-03T00:49:26Z INSDC status public Submitter Id MGBC163899 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 77.67 completeness software CheckM contamination score 3.24 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163899 scientific_name uncultured Clostridia bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544308 SAMEA112433998 244328 uncultured Clostridia bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433998 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:26Z INSDC last update 2023-02-03T00:49:26Z INSDC status public Submitter Id MGBC163900 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 76.00 completeness software CheckM contamination score 1.57 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163900 scientific_name uncultured Clostridia bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544309 SAMEA112433999 286138 uncultured Dorea sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112433999 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:26Z INSDC last update 2023-02-03T00:49:26Z INSDC status public Submitter Id MGBC163901 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 75.31 completeness software CheckM contamination score 1.81 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163901 scientific_name uncultured Dorea sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544310 SAMEA112434000 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112434000 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:26Z INSDC last update 2023-02-03T00:49:26Z INSDC status public Submitter Id MGBC163902 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 74.78 completeness software CheckM contamination score 2.20 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163902 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544311 SAMEA112434001 224209 uncultured Bacilli bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112434001 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:26Z INSDC last update 2023-02-03T00:49:26Z INSDC status public Submitter Id MGBC163903 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 74.60 completeness software CheckM contamination score 0.56 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163903 scientific_name uncultured Bacilli bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544312 SAMEA112434002 2054177 Christensenellaceae bacterium assembly software metaSPAdes_v3.10.1 broad-scale environmental context mouse gut collection date not provided sample derived from SRR12474087 geographic location (longitude) not provided DD binning parameters default parameters, kmer: 4 contamination score 0.81 % ENA-FIRST-PUBLIC 2023-02-03T00:49:26Z ENA-LAST-UPDATE 2023-02-03T00:49:26Z completeness software CheckM geographic location (country and/or sea) USA binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) organism Candidatus Borkfalkiaceae bacterium assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics taxonomic identity marker multi-marker approach completeness score 74.59 % environmental medium Proximal colon geographic location (latitude) not provided DD scientific_name Candidatus Borkfalkiaceae bacterium common name investigation type metagenome-assembled genome local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sequencing method Illumina isolation_source Proximal colon ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 ERS14544313 SAMEA112434003 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112434003 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:26Z INSDC last update 2023-02-03T00:49:26Z INSDC status public Submitter Id MGBC163905 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 74.53 completeness software CheckM contamination score 2.99 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163905 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544314 SAMEA112434004 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112434004 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:26Z INSDC last update 2023-02-03T00:49:26Z INSDC status public Submitter Id MGBC163906 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 72.38 completeness software CheckM contamination score 0.76 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163906 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544315 SAMEA112434005 286138 uncultured Dorea sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112434005 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:33Z INSDC last update 2023-02-03T00:49:33Z INSDC status public Submitter Id MGBC163907 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 70.36 completeness software CheckM contamination score 3.51 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163907 scientific_name uncultured Dorea sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544316 SAMEA112434006 172733 uncultured Eubacteriales bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112434006 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:33Z INSDC last update 2023-02-03T00:49:33Z INSDC status public Submitter Id MGBC163908 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 68.80 completeness software CheckM contamination score 0.24 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163908 scientific_name uncultured Eubacteriales bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544317 SAMEA112434007 331630 uncultured Erysipelotrichaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112434007 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:33Z INSDC last update 2023-02-03T00:49:33Z INSDC status public Submitter Id MGBC163909 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 67.83 completeness software CheckM contamination score 0.94 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163909 scientific_name uncultured Erysipelotrichaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544318 SAMEA112434008 286138 uncultured Dorea sp. ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112434008 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:33Z INSDC last update 2023-02-03T00:49:33Z INSDC status public Submitter Id MGBC163910 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 67.54 completeness software CheckM contamination score 0.88 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163910 scientific_name uncultured Dorea sp. sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544319 SAMEA112434009 297314 uncultured Lachnospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112434009 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:33Z INSDC last update 2023-02-03T00:49:33Z INSDC status public Submitter Id MGBC163911 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 67.44 completeness software CheckM contamination score 1.96 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163911 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544320 SAMEA112434010 707003 uncultured Oscillospiraceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112434010 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:33Z INSDC last update 2023-02-03T00:49:33Z INSDC status public Submitter Id MGBC163912 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 62.86 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163912 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544321 SAMEA112434011 172733 uncultured Eubacteriales bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112434011 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:33Z INSDC last update 2023-02-03T00:49:33Z INSDC status public Submitter Id MGBC163913 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 60.84 completeness software CheckM contamination score 0.67 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163913 scientific_name uncultured Eubacteriales bacterium sequencing method Illumina taxonomic identity marker multi-marker approach ERS14544322 SAMEA112434012 2301481 uncultured Muribaculaceae bacterium ENA-FIRST-PUBLIC 2023-02-03 ENA-LAST-UPDATE 2023-02-03 External Id SAMEA112434012 INSDC center alias UNIVERSITY OF CAMBRIDGE INSDC center name UNIVERSITY OF CAMBRIDGE INSDC first public 2023-02-03T00:49:33Z INSDC last update 2023-02-03T00:49:33Z INSDC status public Submitter Id MGBC163914 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSPAdes_v3.10.1 binning parameters default parameters, kmer: 4 binning software metaWRAP (MetaBAT2, MaxBin2 and CONCOCT) broad-scale environmental context mouse gut collection date not provided completeness score 60.06 completeness software CheckM contamination score 0.00 environmental medium Proximal colon geographic location (country and/or sea) USA geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source Proximal colon local environmental context mouse-associated habitat metagenomic source mouse gut metagenome project name Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue sample derived from SRR12474087 sample name MGBC163914 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina taxonomic identity marker multi-marker approach