ERS14644801 SAMEA112647018 2697049 Severe acute respiratory syndrome coronavirus 2 Sequenced wastewater sample from Central WWTP Ljubljana 1 Contains RNA extracts (sample codes) WW0799/22 p-EL Cq (N1) 29,77 Cq (N2) 28,13 DNA concentration (Qubit) 44,6 Date of amplification (ARTIC) 2022-12-09 Date of sending/transfer to sequencing location 2022-12-10 ENA-FIRST-PUBLIC 2023-06-01 ENA-LAST-UPDATE 2023-06-01 External Id SAMEA112647018 Forward file name WW0799_22_AR_1_S158_R1_001.fastq.gz INSDC center alias National Institute of Biology INSDC center name national institute of biology INSDC first public 2023-06-01T00:20:10Z INSDC last update 2023-06-01T00:20:10Z INSDC status public No. replicate 1 Reverse file name WW0799_22_AR_1_S158_R2_001.fastq.gz Sequenced where/how Department of Endocrinology, Diabetes and Metabolism, University Children's Hospital, University Medical Centre Ljubljana Storage location at NIB INEXTVIR -20 Submitter Id WW0799_22_AR_1 collection_date 2022-12-07 environment (biome) wastewater treatment plant influent environment (feature) wastewater treatment plant environment (material) wastewater treatment plant influent geographic location (country and/or sea) Slovenia geographic location (latitude) 46 geographic location (longitude) 15 investigation type virus project name Sequencing of Slovenian WW samples for SARS-CoV-2 variant detection sample name WW0799_22_AR_1 scientific_name Severe acute respiratory syndrome coronavirus 2 sequencing method Illumina wastewater/sludge environmental package wastewater/sludge ERS14644802 SAMEA112647021 2697049 Severe acute respiratory syndrome coronavirus 2 Sequenced wastewater sample from Central WWTP Ljubljana 2 Contains RNA extracts (sample codes) WW0799/22 p-EL Cq (N1) 29,77 Cq (N2) 28,13 DNA concentration (Qubit) 52,2 Date of amplification (ARTIC) 2022-12-09 Date of sending/transfer to sequencing location 2022-12-10 ENA-FIRST-PUBLIC 2023-06-01 ENA-LAST-UPDATE 2023-06-01 External Id SAMEA112647021 Forward file name WW0799_22_AR_2_S159_R1_001.fastq.gz INSDC center alias National Institute of Biology INSDC center name national institute of biology INSDC first public 2023-06-01T00:20:10Z INSDC last update 2023-06-01T00:20:10Z INSDC status public No. replicate 2 Reverse file name WW0799_22_AR_2_S159_R2_001.fastq.gz Sequenced where/how Department of Endocrinology, Diabetes and Metabolism, University Children's Hospital, University Medical Centre Ljubljana Storage location at NIB INEXTVIR -20 Submitter Id WW0799_22_AR_2 collection_date 2022-12-07 environment (biome) wastewater treatment plant influent environment (feature) wastewater treatment plant environment (material) wastewater treatment plant influent geographic location (country and/or sea) Slovenia geographic location (latitude) 46 geographic location (longitude) 15 investigation type virus project name Sequencing of Slovenian WW samples for SARS-CoV-2 variant detection sample name WW0799_22_AR_2 scientific_name Severe acute respiratory syndrome coronavirus 2 sequencing method Illumina wastewater/sludge environmental package wastewater/sludge ERS14644803 SAMEA112647023 2697049 Severe acute respiratory syndrome coronavirus 2 Sequenced wastewater sample from Central WWTP Koper 1 Contains RNA extracts (sample codes) WW0795/22 p-EL Cq (N1) 29,98 Cq (N2) 28,52 DNA concentration (Qubit) 21,6 Date of amplification (ARTIC) 2022-12-09 Date of sending/transfer to sequencing location 2022-12-10 ENA-FIRST-PUBLIC 2023-06-01 ENA-LAST-UPDATE 2023-06-01 External Id SAMEA112647023 Forward file name WW0795_22_AR_1_S160_R1_001.fastq.gz INSDC center alias National Institute of Biology INSDC center name national institute of biology INSDC first public 2023-06-01T00:20:10Z INSDC last update 2023-06-01T00:20:10Z INSDC status public No. replicate 1 Reverse file name WW0795_22_AR_1_S160_R2_001.fastq.gz Sequenced where/how Department of Endocrinology, Diabetes and Metabolism, University Children's Hospital, University Medical Centre Ljubljana Storage location at NIB INEXTVIR -20 Submitter Id WW0795_22_AR_1 collection_date 2022-12-07 environment (biome) wastewater treatment plant influent environment (feature) wastewater treatment plant environment (material) wastewater treatment plant influent geographic location (country and/or sea) Slovenia geographic location (latitude) 46 geographic location (longitude) 15 investigation type virus project name Sequencing of Slovenian WW samples for SARS-CoV-2 variant detection sample name WW0795_22_AR_1 scientific_name Severe acute respiratory syndrome coronavirus 2 sequencing method Illumina wastewater/sludge environmental package wastewater/sludge ERS14644804 SAMEA112647025 2697049 Severe acute respiratory syndrome coronavirus 2 Sequenced wastewater sample from Central WWTP Koper 2 Contains RNA extracts (sample codes) WW0795/22 p-EL Cq (N1) 29,98 Cq (N2) 28,52 DNA concentration (Qubit) 39 Date of amplification (ARTIC) 2022-12-09 Date of sending/transfer to sequencing location 2022-12-10 ENA-FIRST-PUBLIC 2023-06-01 ENA-LAST-UPDATE 2023-06-01 External Id SAMEA112647025 Forward file name WW0795_22_AR_2_S161_R1_001.fastq.gz INSDC center alias National Institute of Biology INSDC center name national institute of biology INSDC first public 2023-06-01T00:20:10Z INSDC last update 2023-06-01T00:20:10Z INSDC status public No. replicate 2 Reverse file name WW0795_22_AR_2_S161_R2_001.fastq.gz Sequenced where/how Department of Endocrinology, Diabetes and Metabolism, University Children's Hospital, University Medical Centre Ljubljana Storage location at NIB INEXTVIR -20 Submitter Id WW0795_22_AR_2 collection_date 2022-12-07 environment (biome) wastewater treatment plant influent environment (feature) wastewater treatment plant environment (material) wastewater treatment plant influent geographic location (country and/or sea) Slovenia geographic location (latitude) 46 geographic location (longitude) 15 investigation type virus project name Sequencing of Slovenian WW samples for SARS-CoV-2 variant detection sample name WW0795_22_AR_2 scientific_name Severe acute respiratory syndrome coronavirus 2 sequencing method Illumina wastewater/sludge environmental package wastewater/sludge ERS14644805 SAMEA112647027 2697049 Severe acute respiratory syndrome coronavirus 2 Sequenced wastewater sample from Central WWTP Maribor 1 Contains RNA extracts (sample codes) WW0791/22 p-EL Cq (N1) 30,11 Cq (N2) 28,66 DNA concentration (Qubit) 42,8 Date of amplification (ARTIC) 2022-12-09 Date of sending/transfer to sequencing location 2022-12-10 ENA-FIRST-PUBLIC 2023-06-01 ENA-LAST-UPDATE 2023-06-01 External Id SAMEA112647027 Forward file name WW0791_22_AR_1_S162_R1_001.fastq.gz INSDC center alias National Institute of Biology INSDC center name national institute of biology INSDC first public 2023-06-01T00:20:10Z INSDC last update 2023-06-01T00:20:10Z INSDC status public No. replicate 1 Reverse file name WW0791_22_AR_1_S162_R2_001.fastq.gz Sequenced where/how Department of Endocrinology, Diabetes and Metabolism, University Children's Hospital, University Medical Centre Ljubljana Storage location at NIB INEXTVIR -20 Submitter Id WW0791_22_AR_1 collection_date 2022-12-07 environment (biome) wastewater treatment plant influent environment (feature) wastewater treatment plant environment (material) wastewater treatment plant influent geographic location (country and/or sea) Slovenia geographic location (latitude) 46 geographic location (longitude) 15 investigation type virus project name Sequencing of Slovenian WW samples for SARS-CoV-2 variant detection sample name WW0791_22_AR_1 scientific_name Severe acute respiratory syndrome coronavirus 2 sequencing method Illumina wastewater/sludge environmental package wastewater/sludge ERS14644806 SAMEA112647029 2697049 Severe acute respiratory syndrome coronavirus 2 Sequenced wastewater sample from Central WWTP Maribor 2 Contains RNA extracts (sample codes) WW0791/22 p-EL Cq (N1) 30,11 Cq (N2) 28,66 DNA concentration (Qubit) 26 Date of amplification (ARTIC) 2022-12-09 Date of sending/transfer to sequencing location 2022-12-10 ENA-FIRST-PUBLIC 2023-06-01 ENA-LAST-UPDATE 2023-06-01 External Id SAMEA112647029 Forward file name WW0791_22_AR_2_S163_R1_001.fastq.gz INSDC center alias National Institute of Biology INSDC center name national institute of biology INSDC first public 2023-06-01T00:20:10Z INSDC last update 2023-06-01T00:20:10Z INSDC status public No. replicate 2 Reverse file name WW0791_22_AR_2_S163_R2_001.fastq.gz Sequenced where/how Department of Endocrinology, Diabetes and Metabolism, University Children's Hospital, University Medical Centre Ljubljana Storage location at NIB INEXTVIR -20 Submitter Id WW0791_22_AR_2 collection_date 2022-12-07 environment (biome) wastewater treatment plant influent environment (feature) wastewater treatment plant environment (material) wastewater treatment plant influent geographic location (country and/or sea) Slovenia geographic location (latitude) 46 geographic location (longitude) 15 investigation type virus project name Sequencing of Slovenian WW samples for SARS-CoV-2 variant detection sample name WW0791_22_AR_2 scientific_name Severe acute respiratory syndrome coronavirus 2 sequencing method Illumina wastewater/sludge environmental package wastewater/sludge