ERS3672281
SAMEA5883825
PR030_S10
9606
Homo sapiens
Protocols: Close contacts of patients with active tuberculosis (TB) were recruited from multiple TB clinics in London. At enrolment, peripheral blood RNA was collected into Tempus tubes. Total blood RNA was extracted using the Tempus Spin RNA Isolation Kit (Ambion; Life Technologies). Globin mRNA and genomic DNA were removed using the GlobinClear kit (Life Technologies) and the TURBO DNAfree kit (Ambion, Life Technologies), respectively. cDNA libraries were generated using the Kapa mRNA Hyperprep kit (Roche).
ENA-FIRST-PUBLIC
2019-08-23T17:03:50Z
ENA-LAST-UPDATE
2019-08-23T10:24:58Z
External Id
SAMEA5883825
INSDC center name
UCL Infection&Immunity Division
INSDC first public
2019-08-23T17:03:50Z
INSDC last update
2019-08-23T10:24:58Z
INSDC status
public
Submitter Id
E-MTAB-68451566551630:PR030_S10
age
29
broker name
ArrayExpress
common name
human
interferon gamma release assay
positive
organism part
blood
preventative tuberculosis treatment
yes
progressor status (median follow-up 1.9 years)
non-progressor
progressor status (median follow-up 346 days)
non-progressor
roe et al 2019 subset (median follow-up 346 days)
yes
sample name
E-MTAB-68451566551630:PR030_S10
scientific_name
Homo sapiens
sex
male
ERS3672282
SAMEA5883826
PR156_S6
9606
Homo sapiens
Protocols: Close contacts of patients with active tuberculosis (TB) were recruited from multiple TB clinics in London. At enrolment, peripheral blood RNA was collected into Tempus tubes. Total blood RNA was extracted using the Tempus Spin RNA Isolation Kit (Ambion; Life Technologies). Globin mRNA and genomic DNA were removed using the GlobinClear kit (Life Technologies) and the TURBO DNAfree kit (Ambion, Life Technologies), respectively. cDNA libraries were generated using the Kapa mRNA Hyperprep kit (Roche).
ENA-FIRST-PUBLIC
2019-08-23T17:03:50Z
ENA-LAST-UPDATE
2019-08-23T10:24:58Z
External Id
SAMEA5883826
INSDC center name
UCL Infection&Immunity Division
INSDC first public
2019-08-23T17:03:50Z
INSDC last update
2019-08-23T10:24:58Z
INSDC status
public
Submitter Id
E-MTAB-68451566551630:PR156_S6
age
32
broker name
ArrayExpress
common name
human
interferon gamma release assay
positive
organism part
blood
preventative tuberculosis treatment
yes
progressor status (median follow-up 1.9 years)
non-progressor
progressor status (median follow-up 346 days)
non-progressor
roe et al 2019 subset (median follow-up 346 days)
yes
sample name
E-MTAB-68451566551630:PR156_S6
scientific_name
Homo sapiens
sex
female
ERS3672283
SAMEA5883827
PR060_S23
9606
Homo sapiens
Protocols: Close contacts of patients with active tuberculosis (TB) were recruited from multiple TB clinics in London. At enrolment, peripheral blood RNA was collected into Tempus tubes. Total blood RNA was extracted using the Tempus Spin RNA Isolation Kit (Ambion; Life Technologies). Globin mRNA and genomic DNA were removed using the GlobinClear kit (Life Technologies) and the TURBO DNAfree kit (Ambion, Life Technologies), respectively. cDNA libraries were generated using the Kapa mRNA Hyperprep kit (Roche).
ENA-FIRST-PUBLIC
2019-08-23T17:03:50Z
ENA-LAST-UPDATE
2019-08-23T10:24:58Z
External Id
SAMEA5883827
INSDC center name
UCL Infection&Immunity Division
INSDC first public
2019-08-23T17:03:50Z
INSDC last update
2019-08-23T10:24:58Z
INSDC status
public
Submitter Id
E-MTAB-68451566551630:PR060_S23
age
28
broker name
ArrayExpress
common name
human
interferon gamma release assay
positive
organism part
blood
preventative tuberculosis treatment
yes
progressor status (median follow-up 1.9 years)
non-progressor
progressor status (median follow-up 346 days)
non-progressor
roe et al 2019 subset (median follow-up 346 days)
yes
sample name
E-MTAB-68451566551630:PR060_S23
scientific_name
Homo sapiens
sex
female
ERS3672284
SAMEA5883828
PR042_S21
9606
Homo sapiens
Protocols: Close contacts of patients with active tuberculosis (TB) were recruited from multiple TB clinics in London. At enrolment, peripheral blood RNA was collected into Tempus tubes. Total blood RNA was extracted using the Tempus Spin RNA Isolation Kit (Ambion; Life Technologies). Globin mRNA and genomic DNA were removed using the GlobinClear kit (Life Technologies) and the TURBO DNAfree kit (Ambion, Life Technologies), respectively. cDNA libraries were generated using the Kapa mRNA Hyperprep kit (Roche).
ENA-FIRST-PUBLIC
2019-08-23T17:03:50Z
ENA-LAST-UPDATE
2019-08-23T10:24:58Z
External Id
SAMEA5883828
INSDC center name
UCL Infection&Immunity Division
INSDC first public
2019-08-23T17:03:50Z
INSDC last update
2019-08-23T10:24:58Z
INSDC status
public
Submitter Id
E-MTAB-68451566551630:PR042_S21
age
21
broker name
ArrayExpress
common name
human
interferon gamma release assay
positive
organism part
blood
preventative tuberculosis treatment
yes
progressor status (median follow-up 1.9 years)
non-progressor
progressor status (median follow-up 346 days)
non-progressor
roe et al 2019 subset (median follow-up 346 days)
yes
sample name
E-MTAB-68451566551630:PR042_S21
scientific_name
Homo sapiens
sex
male
ERS3672285
SAMEA5883829
PR075_S10
9606
Homo sapiens
Protocols: Close contacts of patients with active tuberculosis (TB) were recruited from multiple TB clinics in London. At enrolment, peripheral blood RNA was collected into Tempus tubes. Total blood RNA was extracted using the Tempus Spin RNA Isolation Kit (Ambion; Life Technologies). Globin mRNA and genomic DNA were removed using the GlobinClear kit (Life Technologies) and the TURBO DNAfree kit (Ambion, Life Technologies), respectively. cDNA libraries were generated using the Kapa mRNA Hyperprep kit (Roche).
ENA-FIRST-PUBLIC
2019-08-23T17:03:50Z
ENA-LAST-UPDATE
2019-08-23T10:24:58Z
External Id
SAMEA5883829
INSDC center name
UCL Infection&Immunity Division
INSDC first public
2019-08-23T17:03:50Z
INSDC last update
2019-08-23T10:24:58Z
INSDC status
public
Submitter Id
E-MTAB-68451566551630:PR075_S10
age
32
broker name
ArrayExpress
common name
human
interferon gamma release assay
positive
organism part
blood
preventative tuberculosis treatment
yes
progressor status (median follow-up 1.9 years)
non-progressor
progressor status (median follow-up 346 days)
non-progressor
roe et al 2019 subset (median follow-up 346 days)
yes
sample name
E-MTAB-68451566551630:PR075_S10
scientific_name
Homo sapiens
sex
male
ERS3672286
SAMEA5883830
PR045_S17
9606
Homo sapiens
Protocols: Close contacts of patients with active tuberculosis (TB) were recruited from multiple TB clinics in London. At enrolment, peripheral blood RNA was collected into Tempus tubes. Total blood RNA was extracted using the Tempus Spin RNA Isolation Kit (Ambion; Life Technologies). Globin mRNA and genomic DNA were removed using the GlobinClear kit (Life Technologies) and the TURBO DNAfree kit (Ambion, Life Technologies), respectively. cDNA libraries were generated using the Kapa mRNA Hyperprep kit (Roche).
ENA-FIRST-PUBLIC
2019-08-23T17:03:50Z
ENA-LAST-UPDATE
2019-08-23T10:24:58Z
External Id
SAMEA5883830
INSDC center name
UCL Infection&Immunity Division
INSDC first public
2019-08-23T17:03:50Z
INSDC last update
2019-08-23T10:24:58Z
INSDC status
public
Submitter Id
E-MTAB-68451566551630:PR045_S17
age
19
broker name
ArrayExpress
common name
human
interferon gamma release assay
positive
organism part
blood
preventative tuberculosis treatment
yes
progressor status (median follow-up 1.9 years)
non-progressor
progressor status (median follow-up 346 days)
non-progressor
roe et al 2019 subset (median follow-up 346 days)
yes
sample name
E-MTAB-68451566551630:PR045_S17
scientific_name
Homo sapiens
sex
female
ERS3672287
SAMEA5883831
PR149_S23
9606
Homo sapiens
Protocols: Close contacts of patients with active tuberculosis (TB) were recruited from multiple TB clinics in London. At enrolment, peripheral blood RNA was collected into Tempus tubes. Total blood RNA was extracted using the Tempus Spin RNA Isolation Kit (Ambion; Life Technologies). Globin mRNA and genomic DNA were removed using the GlobinClear kit (Life Technologies) and the TURBO DNAfree kit (Ambion, Life Technologies), respectively. cDNA libraries were generated using the Kapa mRNA Hyperprep kit (Roche).
ENA-FIRST-PUBLIC
2019-08-23T17:03:50Z
ENA-LAST-UPDATE
2019-08-23T10:24:58Z
External Id
SAMEA5883831
INSDC center name
UCL Infection&Immunity Division
INSDC first public
2019-08-23T17:03:50Z
INSDC last update
2019-08-23T10:24:58Z
INSDC status
public
Submitter Id
E-MTAB-68451566551630:PR149_S23
age
26
broker name
ArrayExpress
common name
human
interferon gamma release assay
positive
organism part
blood
preventative tuberculosis treatment
yes
progressor status (median follow-up 1.9 years)
non-progressor
progressor status (median follow-up 346 days)
non-progressor
roe et al 2019 subset (median follow-up 346 days)
yes
sample name
E-MTAB-68451566551630:PR149_S23
scientific_name
Homo sapiens
sex
male
ERS3672288
SAMEA5883832
PR119_S7
9606
Homo sapiens
Protocols: Close contacts of patients with active tuberculosis (TB) were recruited from multiple TB clinics in London. At enrolment, peripheral blood RNA was collected into Tempus tubes. Total blood RNA was extracted using the Tempus Spin RNA Isolation Kit (Ambion; Life Technologies). Globin mRNA and genomic DNA were removed using the GlobinClear kit (Life Technologies) and the TURBO DNAfree kit (Ambion, Life Technologies), respectively. cDNA libraries were generated using the Kapa mRNA Hyperprep kit (Roche).
ENA-FIRST-PUBLIC
2019-08-23T17:03:50Z
ENA-LAST-UPDATE
2019-08-23T10:24:58Z
External Id
SAMEA5883832
INSDC center name
UCL Infection&Immunity Division
INSDC first public
2019-08-23T17:03:50Z
INSDC last update
2019-08-23T10:24:58Z
INSDC status
public
Submitter Id
E-MTAB-68451566551630:PR119_S7
age
30
broker name
ArrayExpress
common name
human
interferon gamma release assay
positive
organism part
blood
preventative tuberculosis treatment
yes
progressor status (median follow-up 1.9 years)
non-progressor
progressor status (median follow-up 346 days)
non-progressor
roe et al 2019 subset (median follow-up 346 days)
yes
sample name
E-MTAB-68451566551630:PR119_S7
scientific_name
Homo sapiens
sex
female
ERS3672289
SAMEA5883833
PR086_S8
9606
Homo sapiens
Protocols: Close contacts of patients with active tuberculosis (TB) were recruited from multiple TB clinics in London. At enrolment, peripheral blood RNA was collected into Tempus tubes. Total blood RNA was extracted using the Tempus Spin RNA Isolation Kit (Ambion; Life Technologies). Globin mRNA and genomic DNA were removed using the GlobinClear kit (Life Technologies) and the TURBO DNAfree kit (Ambion, Life Technologies), respectively. cDNA libraries were generated using the Kapa mRNA Hyperprep kit (Roche).
ENA-FIRST-PUBLIC
2019-08-23T17:03:50Z
ENA-LAST-UPDATE
2019-08-23T10:24:58Z
External Id
SAMEA5883833
INSDC center name
UCL Infection&Immunity Division
INSDC first public
2019-08-23T17:03:50Z
INSDC last update
2019-08-23T10:24:58Z
INSDC status
public
Submitter Id
E-MTAB-68451566551630:PR086_S8
age
33
broker name
ArrayExpress
common name
human
interferon gamma release assay
positive
organism part
blood
preventative tuberculosis treatment
yes
progressor status (median follow-up 1.9 years)
non-progressor
progressor status (median follow-up 346 days)
non-progressor
roe et al 2019 subset (median follow-up 346 days)
yes
sample name
E-MTAB-68451566551630:PR086_S8
scientific_name
Homo sapiens
sex
male
ERS3672290
SAMEA5883834
PR058_S15
9606
Homo sapiens
Protocols: Close contacts of patients with active tuberculosis (TB) were recruited from multiple TB clinics in London. At enrolment, peripheral blood RNA was collected into Tempus tubes. Total blood RNA was extracted using the Tempus Spin RNA Isolation Kit (Ambion; Life Technologies). Globin mRNA and genomic DNA were removed using the GlobinClear kit (Life Technologies) and the TURBO DNAfree kit (Ambion, Life Technologies), respectively. cDNA libraries were generated using the Kapa mRNA Hyperprep kit (Roche).
ENA-FIRST-PUBLIC
2019-08-23T17:03:50Z
ENA-LAST-UPDATE
2019-08-23T10:24:58Z
External Id
SAMEA5883834
INSDC center name
UCL Infection&Immunity Division
INSDC first public
2019-08-23T17:03:50Z
INSDC last update
2019-08-23T10:24:58Z
INSDC status
public
Submitter Id
E-MTAB-68451566551630:PR058_S15
age
31
broker name
ArrayExpress
common name
human
interferon gamma release assay
positive
organism part
blood
preventative tuberculosis treatment
yes
progressor status (median follow-up 1.9 years)
non-progressor
progressor status (median follow-up 346 days)
non-progressor
roe et al 2019 subset (median follow-up 346 days)
yes
sample name
E-MTAB-68451566551630:PR058_S15
scientific_name
Homo sapiens
sex
male
ERS3672291
SAMEA5883835
PR059_S1
9606
Homo sapiens
Protocols: Close contacts of patients with active tuberculosis (TB) were recruited from multiple TB clinics in London. At enrolment, peripheral blood RNA was collected into Tempus tubes. Total blood RNA was extracted using the Tempus Spin RNA Isolation Kit (Ambion; Life Technologies). Globin mRNA and genomic DNA were removed using the GlobinClear kit (Life Technologies) and the TURBO DNAfree kit (Ambion, Life Technologies), respectively. cDNA libraries were generated using the Kapa mRNA Hyperprep kit (Roche).
ENA-FIRST-PUBLIC
2019-08-23T17:03:50Z
ENA-LAST-UPDATE
2019-08-23T10:24:58Z
External Id
SAMEA5883835
INSDC center name
UCL Infection&Immunity Division
INSDC first public
2019-08-23T17:03:50Z
INSDC last update
2019-08-23T10:24:58Z
INSDC status
public
Submitter Id
E-MTAB-68451566551630:PR059_S1
age
22
broker name
ArrayExpress
common name
human
interferon gamma release assay
positive
organism part
blood
preventative tuberculosis treatment
yes
progressor status (median follow-up 1.9 years)
non-progressor
progressor status (median follow-up 346 days)
non-progressor
roe et al 2019 subset (median follow-up 346 days)
yes
sample name
E-MTAB-68451566551630:PR059_S1
scientific_name
Homo sapiens
sex
female
ERS3672292
SAMEA5883836
PR294_S9
9606
Homo sapiens
Protocols: Close contacts of patients with active tuberculosis (TB) were recruited from multiple TB clinics in London. At enrolment, peripheral blood RNA was collected into Tempus tubes. Total blood RNA was extracted using the Tempus Spin RNA Isolation Kit (Ambion; Life Technologies). Globin mRNA and genomic DNA were removed using the GlobinClear kit (Life Technologies) and the TURBO DNAfree kit (Ambion, Life Technologies), respectively. cDNA libraries were generated using the Kapa mRNA Hyperprep kit (Roche).
ENA-FIRST-PUBLIC
2019-08-23T17:03:50Z
ENA-LAST-UPDATE
2019-08-23T10:24:58Z
External Id
SAMEA5883836
INSDC center name
UCL Infection&Immunity Division
INSDC first public
2019-08-23T17:03:50Z
INSDC last update
2019-08-23T10:24:58Z
INSDC status
public
Submitter Id
E-MTAB-68451566551630:PR294_S9
age
33
broker name
ArrayExpress
common name
human
interferon gamma release assay
positive
organism part
blood
preventative tuberculosis treatment
yes
progressor status (median follow-up 1.9 years)
non-progressor
progressor status (median follow-up 346 days)
non-progressor
roe et al 2019 subset (median follow-up 346 days)
yes
sample name
E-MTAB-68451566551630:PR294_S9
scientific_name
Homo sapiens
sex
male
ERS3672293
SAMEA5883837
PR027_S23
9606
Homo sapiens
Protocols: Close contacts of patients with active tuberculosis (TB) were recruited from multiple TB clinics in London. At enrolment, peripheral blood RNA was collected into Tempus tubes. Total blood RNA was extracted using the Tempus Spin RNA Isolation Kit (Ambion; Life Technologies). Globin mRNA and genomic DNA were removed using the GlobinClear kit (Life Technologies) and the TURBO DNAfree kit (Ambion, Life Technologies), respectively. cDNA libraries were generated using the Kapa mRNA Hyperprep kit (Roche).
ENA-FIRST-PUBLIC
2019-08-23T17:03:50Z
ENA-LAST-UPDATE
2019-08-23T10:24:58Z
External Id
SAMEA5883837
INSDC center name
UCL Infection&Immunity Division
INSDC first public
2019-08-23T17:03:50Z
INSDC last update
2019-08-23T10:24:58Z
INSDC status
public
Submitter Id
E-MTAB-68451566551630:PR027_S23
age
19
broker name
ArrayExpress
common name
human
interferon gamma release assay
positive
organism part
blood
preventative tuberculosis treatment
yes
progressor status (median follow-up 1.9 years)
non-progressor
progressor status (median follow-up 346 days)
non-progressor
roe et al 2019 subset (median follow-up 346 days)
yes
sample name
E-MTAB-68451566551630:PR027_S23
scientific_name
Homo sapiens
sex
female
ERS3672294
SAMEA5883838
PR325_S9
9606
Homo sapiens
Protocols: Close contacts of patients with active tuberculosis (TB) were recruited from multiple TB clinics in London. At enrolment, peripheral blood RNA was collected into Tempus tubes. Total blood RNA was extracted using the Tempus Spin RNA Isolation Kit (Ambion; Life Technologies). Globin mRNA and genomic DNA were removed using the GlobinClear kit (Life Technologies) and the TURBO DNAfree kit (Ambion, Life Technologies), respectively. cDNA libraries were generated using the Kapa mRNA Hyperprep kit (Roche).
ENA-FIRST-PUBLIC
2019-08-23T17:03:50Z
ENA-LAST-UPDATE
2019-08-23T10:24:58Z
External Id
SAMEA5883838
INSDC center name
UCL Infection&Immunity Division
INSDC first public
2019-08-23T17:03:50Z
INSDC last update
2019-08-23T10:24:58Z
INSDC status
public
Submitter Id
E-MTAB-68451566551630:PR325_S9
age
49
broker name
ArrayExpress
common name
human
interferon gamma release assay
positive
organism part
blood
preventative tuberculosis treatment
yes
progressor status (median follow-up 1.9 years)
non-progressor
progressor status (median follow-up 346 days)
non-progressor
roe et al 2019 subset (median follow-up 346 days)
yes
sample name
E-MTAB-68451566551630:PR325_S9
scientific_name
Homo sapiens
sex
male
ERS3672295
SAMEA5883839
PR311_S20
9606
Homo sapiens
Protocols: Close contacts of patients with active tuberculosis (TB) were recruited from multiple TB clinics in London. At enrolment, peripheral blood RNA was collected into Tempus tubes. Total blood RNA was extracted using the Tempus Spin RNA Isolation Kit (Ambion; Life Technologies). Globin mRNA and genomic DNA were removed using the GlobinClear kit (Life Technologies) and the TURBO DNAfree kit (Ambion, Life Technologies), respectively. cDNA libraries were generated using the Kapa mRNA Hyperprep kit (Roche).
ENA-FIRST-PUBLIC
2019-08-23T17:03:50Z
ENA-LAST-UPDATE
2019-08-23T10:24:58Z
External Id
SAMEA5883839
INSDC center name
UCL Infection&Immunity Division
INSDC first public
2019-08-23T17:03:50Z
INSDC last update
2019-08-23T10:24:58Z
INSDC status
public
Submitter Id
E-MTAB-68451566551630:PR311_S20
age
25
broker name
ArrayExpress
common name
human
interferon gamma release assay
positive
organism part
blood
preventative tuberculosis treatment
yes
progressor status (median follow-up 1.9 years)
non-progressor
progressor status (median follow-up 346 days)
non-progressor
roe et al 2019 subset (median follow-up 346 days)
yes
sample name
E-MTAB-68451566551630:PR311_S20
scientific_name
Homo sapiens
sex
female
ERS3672296
SAMEA5883840
PR289_S24
9606
Homo sapiens
Protocols: Close contacts of patients with active tuberculosis (TB) were recruited from multiple TB clinics in London. At enrolment, peripheral blood RNA was collected into Tempus tubes. Total blood RNA was extracted using the Tempus Spin RNA Isolation Kit (Ambion; Life Technologies). Globin mRNA and genomic DNA were removed using the GlobinClear kit (Life Technologies) and the TURBO DNAfree kit (Ambion, Life Technologies), respectively. cDNA libraries were generated using the Kapa mRNA Hyperprep kit (Roche).
ENA-FIRST-PUBLIC
2019-08-23T17:03:50Z
ENA-LAST-UPDATE
2019-08-23T10:24:58Z
External Id
SAMEA5883840
INSDC center name
UCL Infection&Immunity Division
INSDC first public
2019-08-23T17:03:50Z
INSDC last update
2019-08-23T10:24:58Z
INSDC status
public
Submitter Id
E-MTAB-68451566551630:PR289_S24
age
42
broker name
ArrayExpress
common name
human
interferon gamma release assay
positive
organism part
blood
preventative tuberculosis treatment
yes
progressor status (median follow-up 1.9 years)
non-progressor
progressor status (median follow-up 346 days)
non-progressor
roe et al 2019 subset (median follow-up 346 days)
yes
sample name
E-MTAB-68451566551630:PR289_S24
scientific_name
Homo sapiens
sex
male
ERS3672297
SAMEA5883841
PR335_S13
9606
Homo sapiens
Protocols: Close contacts of patients with active tuberculosis (TB) were recruited from multiple TB clinics in London. At enrolment, peripheral blood RNA was collected into Tempus tubes. Total blood RNA was extracted using the Tempus Spin RNA Isolation Kit (Ambion; Life Technologies). Globin mRNA and genomic DNA were removed using the GlobinClear kit (Life Technologies) and the TURBO DNAfree kit (Ambion, Life Technologies), respectively. cDNA libraries were generated using the Kapa mRNA Hyperprep kit (Roche).
ENA-FIRST-PUBLIC
2019-08-23T17:03:50Z
ENA-LAST-UPDATE
2019-08-23T10:24:58Z
External Id
SAMEA5883841
INSDC center name
UCL Infection&Immunity Division
INSDC first public
2019-08-23T17:03:50Z
INSDC last update
2019-08-23T10:24:58Z
INSDC status
public
Submitter Id
E-MTAB-68451566551630:PR335_S13
age
30
broker name
ArrayExpress
common name
human
interferon gamma release assay
positive
organism part
blood
preventative tuberculosis treatment
yes
progressor status (median follow-up 1.9 years)
non-progressor
progressor status (median follow-up 346 days)
non-progressor
roe et al 2019 subset (median follow-up 346 days)
yes
sample name
E-MTAB-68451566551630:PR335_S13
scientific_name
Homo sapiens
sex
female
ERS3672298
SAMEA5883842
PR141_S22
9606
Homo sapiens
Protocols: Close contacts of patients with active tuberculosis (TB) were recruited from multiple TB clinics in London. At enrolment, peripheral blood RNA was collected into Tempus tubes. Total blood RNA was extracted using the Tempus Spin RNA Isolation Kit (Ambion; Life Technologies). Globin mRNA and genomic DNA were removed using the GlobinClear kit (Life Technologies) and the TURBO DNAfree kit (Ambion, Life Technologies), respectively. cDNA libraries were generated using the Kapa mRNA Hyperprep kit (Roche).
ENA-FIRST-PUBLIC
2019-08-23T17:03:50Z
ENA-LAST-UPDATE
2019-08-23T10:24:58Z
External Id
SAMEA5883842
INSDC center name
UCL Infection&Immunity Division
INSDC first public
2019-08-23T17:03:50Z
INSDC last update
2019-08-23T10:24:58Z
INSDC status
public
Submitter Id
E-MTAB-68451566551630:PR141_S22
age
24
broker name
ArrayExpress
common name
human
interferon gamma release assay
positive
organism part
blood
preventative tuberculosis treatment
yes
progressor status (median follow-up 1.9 years)
non-progressor
progressor status (median follow-up 346 days)
non-progressor
roe et al 2019 subset (median follow-up 346 days)
yes
sample name
E-MTAB-68451566551630:PR141_S22
scientific_name
Homo sapiens
sex
male
ERS3672299
SAMEA5883843
PR201_S6
9606
Homo sapiens
Protocols: Close contacts of patients with active tuberculosis (TB) were recruited from multiple TB clinics in London. At enrolment, peripheral blood RNA was collected into Tempus tubes. Total blood RNA was extracted using the Tempus Spin RNA Isolation Kit (Ambion; Life Technologies). Globin mRNA and genomic DNA were removed using the GlobinClear kit (Life Technologies) and the TURBO DNAfree kit (Ambion, Life Technologies), respectively. cDNA libraries were generated using the Kapa mRNA Hyperprep kit (Roche).
ENA-FIRST-PUBLIC
2019-08-23T17:03:50Z
ENA-LAST-UPDATE
2019-08-23T10:24:58Z
External Id
SAMEA5883843
INSDC center name
UCL Infection&Immunity Division
INSDC first public
2019-08-23T17:03:50Z
INSDC last update
2019-08-23T10:24:58Z
INSDC status
public
Submitter Id
E-MTAB-68451566551630:PR201_S6
age
35
broker name
ArrayExpress
common name
human
interferon gamma release assay
positive
organism part
blood
preventative tuberculosis treatment
yes
progressor status (median follow-up 1.9 years)
non-progressor
progressor status (median follow-up 346 days)
non-progressor
roe et al 2019 subset (median follow-up 346 days)
yes
sample name
E-MTAB-68451566551630:PR201_S6
scientific_name
Homo sapiens
sex
male
ERS3672300
SAMEA5883844
PR180_S19
9606
Homo sapiens
Protocols: Close contacts of patients with active tuberculosis (TB) were recruited from multiple TB clinics in London. At enrolment, peripheral blood RNA was collected into Tempus tubes. Total blood RNA was extracted using the Tempus Spin RNA Isolation Kit (Ambion; Life Technologies). Globin mRNA and genomic DNA were removed using the GlobinClear kit (Life Technologies) and the TURBO DNAfree kit (Ambion, Life Technologies), respectively. cDNA libraries were generated using the Kapa mRNA Hyperprep kit (Roche).
ENA-FIRST-PUBLIC
2019-08-23T17:03:50Z
ENA-LAST-UPDATE
2019-08-23T10:24:58Z
External Id
SAMEA5883844
INSDC center name
UCL Infection&Immunity Division
INSDC first public
2019-08-23T17:03:50Z
INSDC last update
2019-08-23T10:24:58Z
INSDC status
public
Submitter Id
E-MTAB-68451566551630:PR180_S19
age
49
broker name
ArrayExpress
common name
human
interferon gamma release assay
positive
organism part
blood
preventative tuberculosis treatment
yes
progressor status (median follow-up 1.9 years)
non-progressor
progressor status (median follow-up 346 days)
non-progressor
roe et al 2019 subset (median follow-up 346 days)
yes
sample name
E-MTAB-68451566551630:PR180_S19
scientific_name
Homo sapiens
sex
female
ERS3672301
SAMEA5883845
PR223_S18
9606
Homo sapiens
Protocols: Close contacts of patients with active tuberculosis (TB) were recruited from multiple TB clinics in London. At enrolment, peripheral blood RNA was collected into Tempus tubes. Total blood RNA was extracted using the Tempus Spin RNA Isolation Kit (Ambion; Life Technologies). Globin mRNA and genomic DNA were removed using the GlobinClear kit (Life Technologies) and the TURBO DNAfree kit (Ambion, Life Technologies), respectively. cDNA libraries were generated using the Kapa mRNA Hyperprep kit (Roche).
ENA-FIRST-PUBLIC
2019-08-23T17:03:50Z
ENA-LAST-UPDATE
2019-08-23T10:24:58Z
External Id
SAMEA5883845
INSDC center name
UCL Infection&Immunity Division
INSDC first public
2019-08-23T17:03:50Z
INSDC last update
2019-08-23T10:24:58Z
INSDC status
public
Submitter Id
E-MTAB-68451566551630:PR223_S18
age
57
broker name
ArrayExpress
common name
human
interferon gamma release assay
positive
organism part
blood
preventative tuberculosis treatment
yes
progressor status (median follow-up 1.9 years)
non-progressor
progressor status (median follow-up 346 days)
non-progressor
roe et al 2019 subset (median follow-up 346 days)
yes
sample name
E-MTAB-68451566551630:PR223_S18
scientific_name
Homo sapiens
sex
male
ERS3672302
SAMEA5883846
PR240_S16
9606
Homo sapiens
Protocols: Close contacts of patients with active tuberculosis (TB) were recruited from multiple TB clinics in London. At enrolment, peripheral blood RNA was collected into Tempus tubes. Total blood RNA was extracted using the Tempus Spin RNA Isolation Kit (Ambion; Life Technologies). Globin mRNA and genomic DNA were removed using the GlobinClear kit (Life Technologies) and the TURBO DNAfree kit (Ambion, Life Technologies), respectively. cDNA libraries were generated using the Kapa mRNA Hyperprep kit (Roche).
ENA-FIRST-PUBLIC
2019-08-23T17:03:50Z
ENA-LAST-UPDATE
2019-08-23T10:24:58Z
External Id
SAMEA5883846
INSDC center name
UCL Infection&Immunity Division
INSDC first public
2019-08-23T17:03:50Z
INSDC last update
2019-08-23T10:24:58Z
INSDC status
public
Submitter Id
E-MTAB-68451566551630:PR240_S16
age
30
broker name
ArrayExpress
common name
human
interferon gamma release assay
positive
organism part
blood
preventative tuberculosis treatment
yes
progressor status (median follow-up 1.9 years)
non-progressor
progressor status (median follow-up 346 days)
non-progressor
roe et al 2019 subset (median follow-up 346 days)
yes
sample name
E-MTAB-68451566551630:PR240_S16
scientific_name
Homo sapiens
sex
male
ERS3672303
SAMEA5883847
PR248_0_S14
9606
Homo sapiens
Protocols: Close contacts of patients with active tuberculosis (TB) were recruited from multiple TB clinics in London. At enrolment, peripheral blood RNA was collected into Tempus tubes. Total blood RNA was extracted using the Tempus Spin RNA Isolation Kit (Ambion; Life Technologies). Globin mRNA and genomic DNA were removed using the GlobinClear kit (Life Technologies) and the TURBO DNAfree kit (Ambion, Life Technologies), respectively. cDNA libraries were generated using the Kapa mRNA Hyperprep kit (Roche).
ENA-FIRST-PUBLIC
2019-08-23T17:03:50Z
ENA-LAST-UPDATE
2019-08-23T10:24:58Z
External Id
SAMEA5883847
INSDC center name
UCL Infection&Immunity Division
INSDC first public
2019-08-23T17:03:50Z
INSDC last update
2019-08-23T10:24:58Z
INSDC status
public
Submitter Id
E-MTAB-68451566551630:PR248_0_S14
age
27
broker name
ArrayExpress
common name
human
interferon gamma release assay
positive
organism part
blood
preventative tuberculosis treatment
yes
progressor status (median follow-up 1.9 years)
non-progressor
progressor status (median follow-up 346 days)
non-progressor
roe et al 2019 subset (median follow-up 346 days)
yes
sample name
E-MTAB-68451566551630:PR248_0_S14
scientific_name
Homo sapiens
sex
male
ERS3672304
SAMEA5883848
PR196_S18
9606
Homo sapiens
Protocols: Close contacts of patients with active tuberculosis (TB) were recruited from multiple TB clinics in London. At enrolment, peripheral blood RNA was collected into Tempus tubes. Total blood RNA was extracted using the Tempus Spin RNA Isolation Kit (Ambion; Life Technologies). Globin mRNA and genomic DNA were removed using the GlobinClear kit (Life Technologies) and the TURBO DNAfree kit (Ambion, Life Technologies), respectively. cDNA libraries were generated using the Kapa mRNA Hyperprep kit (Roche).
ENA-FIRST-PUBLIC
2019-08-23T17:03:50Z
ENA-LAST-UPDATE
2019-08-23T10:24:58Z
External Id
SAMEA5883848
INSDC center name
UCL Infection&Immunity Division
INSDC first public
2019-08-23T17:03:50Z
INSDC last update
2019-08-23T10:24:58Z
INSDC status
public
Submitter Id
E-MTAB-68451566551630:PR196_S18
age
26
broker name
ArrayExpress
common name
human
interferon gamma release assay
positive
organism part
blood
preventative tuberculosis treatment
yes
progressor status (median follow-up 1.9 years)
non-progressor
progressor status (median follow-up 346 days)
non-progressor
roe et al 2019 subset (median follow-up 346 days)
yes
sample name
E-MTAB-68451566551630:PR196_S18
scientific_name
Homo sapiens
sex
male
ERS3672305
SAMEA5883849
PR210_0_S10
9606
Homo sapiens
Protocols: Close contacts of patients with active tuberculosis (TB) were recruited from multiple TB clinics in London. At enrolment, peripheral blood RNA was collected into Tempus tubes. Total blood RNA was extracted using the Tempus Spin RNA Isolation Kit (Ambion; Life Technologies). Globin mRNA and genomic DNA were removed using the GlobinClear kit (Life Technologies) and the TURBO DNAfree kit (Ambion, Life Technologies), respectively. cDNA libraries were generated using the Kapa mRNA Hyperprep kit (Roche).
ENA-FIRST-PUBLIC
2019-08-23T17:03:50Z
ENA-LAST-UPDATE
2019-08-23T10:24:58Z
External Id
SAMEA5883849
INSDC center name
UCL Infection&Immunity Division
INSDC first public
2019-08-23T17:03:50Z
INSDC last update
2019-08-23T10:24:58Z
INSDC status
public
Submitter Id
E-MTAB-68451566551630:PR210_0_S10
age
39
broker name
ArrayExpress
common name
human
interferon gamma release assay
positive
organism part
blood
preventative tuberculosis treatment
yes
progressor status (median follow-up 1.9 years)
non-progressor
progressor status (median follow-up 346 days)
non-progressor
roe et al 2019 subset (median follow-up 346 days)
yes
sample name
E-MTAB-68451566551630:PR210_0_S10
scientific_name
Homo sapiens
sex
male
ERS3672306
SAMEA5883850
PR211_0_S5
9606
Homo sapiens
Protocols: Close contacts of patients with active tuberculosis (TB) were recruited from multiple TB clinics in London. At enrolment, peripheral blood RNA was collected into Tempus tubes. Total blood RNA was extracted using the Tempus Spin RNA Isolation Kit (Ambion; Life Technologies). Globin mRNA and genomic DNA were removed using the GlobinClear kit (Life Technologies) and the TURBO DNAfree kit (Ambion, Life Technologies), respectively. cDNA libraries were generated using the Kapa mRNA Hyperprep kit (Roche).
ENA-FIRST-PUBLIC
2019-08-23T17:03:50Z
ENA-LAST-UPDATE
2019-08-23T10:24:58Z
External Id
SAMEA5883850
INSDC center name
UCL Infection&Immunity Division
INSDC first public
2019-08-23T17:03:50Z
INSDC last update
2019-08-23T10:24:58Z
INSDC status
public
Submitter Id
E-MTAB-68451566551630:PR211_0_S5
age
46
broker name
ArrayExpress
common name
human
interferon gamma release assay
positive
organism part
blood
preventative tuberculosis treatment
yes
progressor status (median follow-up 1.9 years)
non-progressor
progressor status (median follow-up 346 days)
non-progressor
roe et al 2019 subset (median follow-up 346 days)
yes
sample name
E-MTAB-68451566551630:PR211_0_S5
scientific_name
Homo sapiens
sex
female
ERS3672307
SAMEA5883851
PR200_S9
9606
Homo sapiens
Protocols: Close contacts of patients with active tuberculosis (TB) were recruited from multiple TB clinics in London. At enrolment, peripheral blood RNA was collected into Tempus tubes. Total blood RNA was extracted using the Tempus Spin RNA Isolation Kit (Ambion; Life Technologies). Globin mRNA and genomic DNA were removed using the GlobinClear kit (Life Technologies) and the TURBO DNAfree kit (Ambion, Life Technologies), respectively. cDNA libraries were generated using the Kapa mRNA Hyperprep kit (Roche).
ENA-FIRST-PUBLIC
2019-08-23T17:03:50Z
ENA-LAST-UPDATE
2019-08-23T10:24:58Z
External Id
SAMEA5883851
INSDC center name
UCL Infection&Immunity Division
INSDC first public
2019-08-23T17:03:50Z
INSDC last update
2019-08-23T10:24:58Z
INSDC status
public
Submitter Id
E-MTAB-68451566551630:PR200_S9
age
35
broker name
ArrayExpress
common name
human
interferon gamma release assay
positive
organism part
blood
preventative tuberculosis treatment
yes
progressor status (median follow-up 1.9 years)
non-progressor
progressor status (median follow-up 346 days)
non-progressor
roe et al 2019 subset (median follow-up 346 days)
yes
sample name
E-MTAB-68451566551630:PR200_S9
scientific_name
Homo sapiens
sex
male
ERS3672308
SAMEA5883852
PR016_S23
9606
Homo sapiens
Protocols: Close contacts of patients with active tuberculosis (TB) were recruited from multiple TB clinics in London. At enrolment, peripheral blood RNA was collected into Tempus tubes. Total blood RNA was extracted using the Tempus Spin RNA Isolation Kit (Ambion; Life Technologies). Globin mRNA and genomic DNA were removed using the GlobinClear kit (Life Technologies) and the TURBO DNAfree kit (Ambion, Life Technologies), respectively. cDNA libraries were generated using the Kapa mRNA Hyperprep kit (Roche).
ENA-FIRST-PUBLIC
2019-08-23T17:03:50Z
ENA-LAST-UPDATE
2019-08-23T10:24:58Z
External Id
SAMEA5883852
INSDC center name
UCL Infection&Immunity Division
INSDC first public
2019-08-23T17:03:50Z
INSDC last update
2019-08-23T10:24:58Z
INSDC status
public
Submitter Id
E-MTAB-68451566551630:PR016_S23
age
28
broker name
ArrayExpress
common name
human
interferon gamma release assay
positive
organism part
blood
preventative tuberculosis treatment
yes
progressor status (median follow-up 1.9 years)
non-progressor
progressor status (median follow-up 346 days)
non-progressor
roe et al 2019 subset (median follow-up 346 days)
yes
sample name
E-MTAB-68451566551630:PR016_S23
scientific_name
Homo sapiens
sex
male
ERS3672309
SAMEA5883853
PR142_S12
9606
Homo sapiens
Protocols: Close contacts of patients with active tuberculosis (TB) were recruited from multiple TB clinics in London. At enrolment, peripheral blood RNA was collected into Tempus tubes. Total blood RNA was extracted using the Tempus Spin RNA Isolation Kit (Ambion; Life Technologies). Globin mRNA and genomic DNA were removed using the GlobinClear kit (Life Technologies) and the TURBO DNAfree kit (Ambion, Life Technologies), respectively. cDNA libraries were generated using the Kapa mRNA Hyperprep kit (Roche).
ENA-FIRST-PUBLIC
2019-08-23T17:03:50Z
ENA-LAST-UPDATE
2019-08-23T10:24:58Z
External Id
SAMEA5883853
INSDC center name
UCL Infection&Immunity Division
INSDC first public
2019-08-23T17:03:50Z
INSDC last update
2019-08-23T10:24:58Z
INSDC status
public
Submitter Id
E-MTAB-68451566551630:PR142_S12
age
49
broker name
ArrayExpress
common name
human
interferon gamma release assay
negative
organism part
blood
preventative tuberculosis treatment
no
progressor status (median follow-up 1.9 years)
non-progressor
progressor status (median follow-up 346 days)
non-progressor
roe et al 2019 subset (median follow-up 346 days)
no
sample name
E-MTAB-68451566551630:PR142_S12
scientific_name
Homo sapiens
sex
female
ERS3672310
SAMEA5883854
PR132_S16
9606
Homo sapiens
Protocols: Close contacts of patients with active tuberculosis (TB) were recruited from multiple TB clinics in London. At enrolment, peripheral blood RNA was collected into Tempus tubes. Total blood RNA was extracted using the Tempus Spin RNA Isolation Kit (Ambion; Life Technologies). Globin mRNA and genomic DNA were removed using the GlobinClear kit (Life Technologies) and the TURBO DNAfree kit (Ambion, Life Technologies), respectively. cDNA libraries were generated using the Kapa mRNA Hyperprep kit (Roche).
ENA-FIRST-PUBLIC
2019-08-23T17:03:50Z
ENA-LAST-UPDATE
2019-08-23T10:24:58Z
External Id
SAMEA5883854
INSDC center name
UCL Infection&Immunity Division
INSDC first public
2019-08-23T17:03:50Z
INSDC last update
2019-08-23T10:24:58Z
INSDC status
public
Submitter Id
E-MTAB-68451566551630:PR132_S16
age
30
broker name
ArrayExpress
common name
human
interferon gamma release assay
negative
organism part
blood
preventative tuberculosis treatment
no
progressor status (median follow-up 1.9 years)
non-progressor
progressor status (median follow-up 346 days)
non-progressor
roe et al 2019 subset (median follow-up 346 days)
no
sample name
E-MTAB-68451566551630:PR132_S16
scientific_name
Homo sapiens
sex
male
ERS3672311
SAMEA5883855
PR229_S19
9606
Homo sapiens
Protocols: Close contacts of patients with active tuberculosis (TB) were recruited from multiple TB clinics in London. At enrolment, peripheral blood RNA was collected into Tempus tubes. Total blood RNA was extracted using the Tempus Spin RNA Isolation Kit (Ambion; Life Technologies). Globin mRNA and genomic DNA were removed using the GlobinClear kit (Life Technologies) and the TURBO DNAfree kit (Ambion, Life Technologies), respectively. cDNA libraries were generated using the Kapa mRNA Hyperprep kit (Roche).
ENA-FIRST-PUBLIC
2019-08-23T17:03:50Z
ENA-LAST-UPDATE
2019-08-23T10:24:58Z
External Id
SAMEA5883855
INSDC center name
UCL Infection&Immunity Division
INSDC first public
2019-08-23T17:03:50Z
INSDC last update
2019-08-23T10:24:58Z
INSDC status
public
Submitter Id
E-MTAB-68451566551630:PR229_S19
age
31
broker name
ArrayExpress
common name
human
interferon gamma release assay
negative
organism part
blood
preventative tuberculosis treatment
no
progressor status (median follow-up 1.9 years)
non-progressor
progressor status (median follow-up 346 days)
non-progressor
roe et al 2019 subset (median follow-up 346 days)
no
sample name
E-MTAB-68451566551630:PR229_S19
scientific_name
Homo sapiens
sex
female
ERS3672312
SAMEA5883856
PR110_S10
9606
Homo sapiens
Protocols: Close contacts of patients with active tuberculosis (TB) were recruited from multiple TB clinics in London. At enrolment, peripheral blood RNA was collected into Tempus tubes. Total blood RNA was extracted using the Tempus Spin RNA Isolation Kit (Ambion; Life Technologies). Globin mRNA and genomic DNA were removed using the GlobinClear kit (Life Technologies) and the TURBO DNAfree kit (Ambion, Life Technologies), respectively. cDNA libraries were generated using the Kapa mRNA Hyperprep kit (Roche).
ENA-FIRST-PUBLIC
2019-08-23T17:03:50Z
ENA-LAST-UPDATE
2019-08-23T10:24:58Z
External Id
SAMEA5883856
INSDC center name
UCL Infection&Immunity Division
INSDC first public
2019-08-23T17:03:50Z
INSDC last update
2019-08-23T10:24:58Z
INSDC status
public
Submitter Id
E-MTAB-68451566551630:PR110_S10
age
21
broker name
ArrayExpress
common name
human
interferon gamma release assay
negative
organism part
blood
preventative tuberculosis treatment
no
progressor status (median follow-up 1.9 years)
non-progressor
progressor status (median follow-up 346 days)
non-progressor
roe et al 2019 subset (median follow-up 346 days)
no
sample name
E-MTAB-68451566551630:PR110_S10
scientific_name
Homo sapiens
sex
male
ERS3672313
SAMEA5883857
PR145_S3
9606
Homo sapiens
Protocols: Close contacts of patients with active tuberculosis (TB) were recruited from multiple TB clinics in London. At enrolment, peripheral blood RNA was collected into Tempus tubes. Total blood RNA was extracted using the Tempus Spin RNA Isolation Kit (Ambion; Life Technologies). Globin mRNA and genomic DNA were removed using the GlobinClear kit (Life Technologies) and the TURBO DNAfree kit (Ambion, Life Technologies), respectively. cDNA libraries were generated using the Kapa mRNA Hyperprep kit (Roche).
ENA-FIRST-PUBLIC
2019-08-23T17:03:50Z
ENA-LAST-UPDATE
2019-08-23T10:24:58Z
External Id
SAMEA5883857
INSDC center name
UCL Infection&Immunity Division
INSDC first public
2019-08-23T17:03:50Z
INSDC last update
2019-08-23T10:24:58Z
INSDC status
public
Submitter Id
E-MTAB-68451566551630:PR145_S3
age
18
broker name
ArrayExpress
common name
human
interferon gamma release assay
negative
organism part
blood
preventative tuberculosis treatment
no
progressor status (median follow-up 1.9 years)
non-progressor
progressor status (median follow-up 346 days)
non-progressor
roe et al 2019 subset (median follow-up 346 days)
no
sample name
E-MTAB-68451566551630:PR145_S3
scientific_name
Homo sapiens
sex
male
ERS3672314
SAMEA5883858
PR055_S8
9606
Homo sapiens
Protocols: Close contacts of patients with active tuberculosis (TB) were recruited from multiple TB clinics in London. At enrolment, peripheral blood RNA was collected into Tempus tubes. Total blood RNA was extracted using the Tempus Spin RNA Isolation Kit (Ambion; Life Technologies). Globin mRNA and genomic DNA were removed using the GlobinClear kit (Life Technologies) and the TURBO DNAfree kit (Ambion, Life Technologies), respectively. cDNA libraries were generated using the Kapa mRNA Hyperprep kit (Roche).
ENA-FIRST-PUBLIC
2019-08-23T17:03:50Z
ENA-LAST-UPDATE
2019-08-23T10:24:58Z
External Id
SAMEA5883858
INSDC center name
UCL Infection&Immunity Division
INSDC first public
2019-08-23T17:03:50Z
INSDC last update
2019-08-23T10:24:58Z
INSDC status
public
Submitter Id
E-MTAB-68451566551630:PR055_S8
age
19
broker name
ArrayExpress
common name
human
interferon gamma release assay
negative
organism part
blood
preventative tuberculosis treatment
no
progressor status (median follow-up 1.9 years)
non-progressor
progressor status (median follow-up 346 days)
non-progressor
roe et al 2019 subset (median follow-up 346 days)
no
sample name
E-MTAB-68451566551630:PR055_S8
scientific_name
Homo sapiens
sex
male
ERS3672315
SAMEA5883859
PR237_S21
9606
Homo sapiens
Protocols: Close contacts of patients with active tuberculosis (TB) were recruited from multiple TB clinics in London. At enrolment, peripheral blood RNA was collected into Tempus tubes. Total blood RNA was extracted using the Tempus Spin RNA Isolation Kit (Ambion; Life Technologies). Globin mRNA and genomic DNA were removed using the GlobinClear kit (Life Technologies) and the TURBO DNAfree kit (Ambion, Life Technologies), respectively. cDNA libraries were generated using the Kapa mRNA Hyperprep kit (Roche).
ENA-FIRST-PUBLIC
2019-08-23T17:03:50Z
ENA-LAST-UPDATE
2019-08-23T10:24:59Z
External Id
SAMEA5883859
INSDC center name
UCL Infection&Immunity Division
INSDC first public
2019-08-23T17:03:50Z
INSDC last update
2019-08-23T10:24:59Z
INSDC status
public
Submitter Id
E-MTAB-68451566551630:PR237_S21
age
20
broker name
ArrayExpress
common name
human
interferon gamma release assay
negative
organism part
blood
preventative tuberculosis treatment
no
progressor status (median follow-up 1.9 years)
non-progressor
progressor status (median follow-up 346 days)
non-progressor
roe et al 2019 subset (median follow-up 346 days)
no
sample name
E-MTAB-68451566551630:PR237_S21
scientific_name
Homo sapiens
sex
male
ERS3672316
SAMEA5883860
PR138_S14
9606
Homo sapiens
Protocols: Close contacts of patients with active tuberculosis (TB) were recruited from multiple TB clinics in London. At enrolment, peripheral blood RNA was collected into Tempus tubes. Total blood RNA was extracted using the Tempus Spin RNA Isolation Kit (Ambion; Life Technologies). Globin mRNA and genomic DNA were removed using the GlobinClear kit (Life Technologies) and the TURBO DNAfree kit (Ambion, Life Technologies), respectively. cDNA libraries were generated using the Kapa mRNA Hyperprep kit (Roche).
ENA-FIRST-PUBLIC
2019-08-23T17:03:50Z
ENA-LAST-UPDATE
2019-08-23T10:24:59Z
External Id
SAMEA5883860
INSDC center name
UCL Infection&Immunity Division
INSDC first public
2019-08-23T17:03:50Z
INSDC last update
2019-08-23T10:24:59Z
INSDC status
public
Submitter Id
E-MTAB-68451566551630:PR138_S14
age
44
broker name
ArrayExpress
common name
human
interferon gamma release assay
negative
organism part
blood
preventative tuberculosis treatment
no
progressor status (median follow-up 1.9 years)
non-progressor
progressor status (median follow-up 346 days)
non-progressor
roe et al 2019 subset (median follow-up 346 days)
no
sample name
E-MTAB-68451566551630:PR138_S14
scientific_name
Homo sapiens
sex
male
ERS3672317
SAMEA5883861
PR074_S9
9606
Homo sapiens
Protocols: Close contacts of patients with active tuberculosis (TB) were recruited from multiple TB clinics in London. At enrolment, peripheral blood RNA was collected into Tempus tubes. Total blood RNA was extracted using the Tempus Spin RNA Isolation Kit (Ambion; Life Technologies). Globin mRNA and genomic DNA were removed using the GlobinClear kit (Life Technologies) and the TURBO DNAfree kit (Ambion, Life Technologies), respectively. cDNA libraries were generated using the Kapa mRNA Hyperprep kit (Roche).
ENA-FIRST-PUBLIC
2019-08-23T17:03:50Z
ENA-LAST-UPDATE
2019-08-23T10:24:59Z
External Id
SAMEA5883861
INSDC center name
UCL Infection&Immunity Division
INSDC first public
2019-08-23T17:03:50Z
INSDC last update
2019-08-23T10:24:59Z
INSDC status
public
Submitter Id
E-MTAB-68451566551630:PR074_S9
age
35
broker name
ArrayExpress
common name
human
interferon gamma release assay
negative
organism part
blood
preventative tuberculosis treatment
no
progressor status (median follow-up 1.9 years)
non-progressor
progressor status (median follow-up 346 days)
non-progressor
roe et al 2019 subset (median follow-up 346 days)
no
sample name
E-MTAB-68451566551630:PR074_S9
scientific_name
Homo sapiens
sex
male
ERS3672318
SAMEA5883862
PR148_S22
9606
Homo sapiens
Protocols: Close contacts of patients with active tuberculosis (TB) were recruited from multiple TB clinics in London. At enrolment, peripheral blood RNA was collected into Tempus tubes. Total blood RNA was extracted using the Tempus Spin RNA Isolation Kit (Ambion; Life Technologies). Globin mRNA and genomic DNA were removed using the GlobinClear kit (Life Technologies) and the TURBO DNAfree kit (Ambion, Life Technologies), respectively. cDNA libraries were generated using the Kapa mRNA Hyperprep kit (Roche).
ENA-FIRST-PUBLIC
2019-08-23T17:03:50Z
ENA-LAST-UPDATE
2019-08-23T10:24:59Z
External Id
SAMEA5883862
INSDC center name
UCL Infection&Immunity Division
INSDC first public
2019-08-23T17:03:50Z
INSDC last update
2019-08-23T10:24:59Z
INSDC status
public
Submitter Id
E-MTAB-68451566551630:PR148_S22
age
47
broker name
ArrayExpress
common name
human
interferon gamma release assay
negative
organism part
blood
preventative tuberculosis treatment
no
progressor status (median follow-up 1.9 years)
non-progressor
progressor status (median follow-up 346 days)
non-progressor
roe et al 2019 subset (median follow-up 346 days)
no
sample name
E-MTAB-68451566551630:PR148_S22
scientific_name
Homo sapiens
sex
female
ERS3672319
SAMEA5883863
PR036_S13
9606
Homo sapiens
Protocols: Close contacts of patients with active tuberculosis (TB) were recruited from multiple TB clinics in London. At enrolment, peripheral blood RNA was collected into Tempus tubes. Total blood RNA was extracted using the Tempus Spin RNA Isolation Kit (Ambion; Life Technologies). Globin mRNA and genomic DNA were removed using the GlobinClear kit (Life Technologies) and the TURBO DNAfree kit (Ambion, Life Technologies), respectively. cDNA libraries were generated using the Kapa mRNA Hyperprep kit (Roche).
ENA-FIRST-PUBLIC
2019-08-23T17:03:50Z
ENA-LAST-UPDATE
2019-08-23T10:24:59Z
External Id
SAMEA5883863
INSDC center name
UCL Infection&Immunity Division
INSDC first public
2019-08-23T17:03:50Z
INSDC last update
2019-08-23T10:24:59Z
INSDC status
public
Submitter Id
E-MTAB-68451566551630:PR036_S13
age
27
broker name
ArrayExpress
common name
human
interferon gamma release assay
negative
organism part
blood
preventative tuberculosis treatment
no
progressor status (median follow-up 1.9 years)
non-progressor
progressor status (median follow-up 346 days)
non-progressor
roe et al 2019 subset (median follow-up 346 days)
no
sample name
E-MTAB-68451566551630:PR036_S13
scientific_name
Homo sapiens
sex
female
ERS3672320
SAMEA5883864
PR104_S18
9606
Homo sapiens
Protocols: Close contacts of patients with active tuberculosis (TB) were recruited from multiple TB clinics in London. At enrolment, peripheral blood RNA was collected into Tempus tubes. Total blood RNA was extracted using the Tempus Spin RNA Isolation Kit (Ambion; Life Technologies). Globin mRNA and genomic DNA were removed using the GlobinClear kit (Life Technologies) and the TURBO DNAfree kit (Ambion, Life Technologies), respectively. cDNA libraries were generated using the Kapa mRNA Hyperprep kit (Roche).
ENA-FIRST-PUBLIC
2019-08-23T17:03:50Z
ENA-LAST-UPDATE
2019-08-23T10:24:59Z
External Id
SAMEA5883864
INSDC center name
UCL Infection&Immunity Division
INSDC first public
2019-08-23T17:03:50Z
INSDC last update
2019-08-23T10:24:59Z
INSDC status
public
Submitter Id
E-MTAB-68451566551630:PR104_S18
age
42
broker name
ArrayExpress
common name
human
interferon gamma release assay
negative
organism part
blood
preventative tuberculosis treatment
no
progressor status (median follow-up 1.9 years)
non-progressor
progressor status (median follow-up 346 days)
non-progressor
roe et al 2019 subset (median follow-up 346 days)
no
sample name
E-MTAB-68451566551630:PR104_S18
scientific_name
Homo sapiens
sex
male
ERS3672321
SAMEA5883865
PR035_S1
9606
Homo sapiens
Protocols: Close contacts of patients with active tuberculosis (TB) were recruited from multiple TB clinics in London. At enrolment, peripheral blood RNA was collected into Tempus tubes. Total blood RNA was extracted using the Tempus Spin RNA Isolation Kit (Ambion; Life Technologies). Globin mRNA and genomic DNA were removed using the GlobinClear kit (Life Technologies) and the TURBO DNAfree kit (Ambion, Life Technologies), respectively. cDNA libraries were generated using the Kapa mRNA Hyperprep kit (Roche).
ENA-FIRST-PUBLIC
2019-08-23T17:03:50Z
ENA-LAST-UPDATE
2019-08-23T10:24:59Z
External Id
SAMEA5883865
INSDC center name
UCL Infection&Immunity Division
INSDC first public
2019-08-23T17:03:50Z
INSDC last update
2019-08-23T10:24:59Z
INSDC status
public
Submitter Id
E-MTAB-68451566551630:PR035_S1
age
27
broker name
ArrayExpress
common name
human
interferon gamma release assay
negative
organism part
blood
preventative tuberculosis treatment
no
progressor status (median follow-up 1.9 years)
non-progressor
progressor status (median follow-up 346 days)
non-progressor
roe et al 2019 subset (median follow-up 346 days)
no
sample name
E-MTAB-68451566551630:PR035_S1
scientific_name
Homo sapiens
sex
female
ERS3672322
SAMEA5883866
PR152_S6
9606
Homo sapiens
Protocols: Close contacts of patients with active tuberculosis (TB) were recruited from multiple TB clinics in London. At enrolment, peripheral blood RNA was collected into Tempus tubes. Total blood RNA was extracted using the Tempus Spin RNA Isolation Kit (Ambion; Life Technologies). Globin mRNA and genomic DNA were removed using the GlobinClear kit (Life Technologies) and the TURBO DNAfree kit (Ambion, Life Technologies), respectively. cDNA libraries were generated using the Kapa mRNA Hyperprep kit (Roche).
ENA-FIRST-PUBLIC
2019-08-23T17:03:50Z
ENA-LAST-UPDATE
2019-08-23T10:24:59Z
External Id
SAMEA5883866
INSDC center name
UCL Infection&Immunity Division
INSDC first public
2019-08-23T17:03:50Z
INSDC last update
2019-08-23T10:24:59Z
INSDC status
public
Submitter Id
E-MTAB-68451566551630:PR152_S6
age
31
broker name
ArrayExpress
common name
human
interferon gamma release assay
negative
organism part
blood
preventative tuberculosis treatment
no
progressor status (median follow-up 1.9 years)
non-progressor
progressor status (median follow-up 346 days)
non-progressor
roe et al 2019 subset (median follow-up 346 days)
no
sample name
E-MTAB-68451566551630:PR152_S6
scientific_name
Homo sapiens
sex
female
ERS3672323
SAMEA5883867
PR245_S24
9606
Homo sapiens
Protocols: Close contacts of patients with active tuberculosis (TB) were recruited from multiple TB clinics in London. At enrolment, peripheral blood RNA was collected into Tempus tubes. Total blood RNA was extracted using the Tempus Spin RNA Isolation Kit (Ambion; Life Technologies). Globin mRNA and genomic DNA were removed using the GlobinClear kit (Life Technologies) and the TURBO DNAfree kit (Ambion, Life Technologies), respectively. cDNA libraries were generated using the Kapa mRNA Hyperprep kit (Roche).
ENA-FIRST-PUBLIC
2019-08-23T17:03:50Z
ENA-LAST-UPDATE
2019-08-23T10:24:59Z
External Id
SAMEA5883867
INSDC center name
UCL Infection&Immunity Division
INSDC first public
2019-08-23T17:03:50Z
INSDC last update
2019-08-23T10:24:59Z
INSDC status
public
Submitter Id
E-MTAB-68451566551630:PR245_S24
age
34
broker name
ArrayExpress
common name
human
interferon gamma release assay
negative
organism part
blood
preventative tuberculosis treatment
no
progressor status (median follow-up 1.9 years)
non-progressor
progressor status (median follow-up 346 days)
non-progressor
roe et al 2019 subset (median follow-up 346 days)
no
sample name
E-MTAB-68451566551630:PR245_S24
scientific_name
Homo sapiens
sex
male
ERS3672324
SAMEA5883868
PR066_S4
9606
Homo sapiens
Protocols: Close contacts of patients with active tuberculosis (TB) were recruited from multiple TB clinics in London. At enrolment, peripheral blood RNA was collected into Tempus tubes. Total blood RNA was extracted using the Tempus Spin RNA Isolation Kit (Ambion; Life Technologies). Globin mRNA and genomic DNA were removed using the GlobinClear kit (Life Technologies) and the TURBO DNAfree kit (Ambion, Life Technologies), respectively. cDNA libraries were generated using the Kapa mRNA Hyperprep kit (Roche).
ENA-FIRST-PUBLIC
2019-08-23T17:03:50Z
ENA-LAST-UPDATE
2019-08-23T10:24:59Z
External Id
SAMEA5883868
INSDC center name
UCL Infection&Immunity Division
INSDC first public
2019-08-23T17:03:50Z
INSDC last update
2019-08-23T10:24:59Z
INSDC status
public
Submitter Id
E-MTAB-68451566551630:PR066_S4
age
28
broker name
ArrayExpress
common name
human
interferon gamma release assay
negative
organism part
blood
preventative tuberculosis treatment
no
progressor status (median follow-up 1.9 years)
non-progressor
progressor status (median follow-up 346 days)
non-progressor
roe et al 2019 subset (median follow-up 346 days)
no
sample name
E-MTAB-68451566551630:PR066_S4
scientific_name
Homo sapiens
sex
female
ERS3672325
SAMEA5883869
PR087_S7
9606
Homo sapiens
Protocols: Close contacts of patients with active tuberculosis (TB) were recruited from multiple TB clinics in London. At enrolment, peripheral blood RNA was collected into Tempus tubes. Total blood RNA was extracted using the Tempus Spin RNA Isolation Kit (Ambion; Life Technologies). Globin mRNA and genomic DNA were removed using the GlobinClear kit (Life Technologies) and the TURBO DNAfree kit (Ambion, Life Technologies), respectively. cDNA libraries were generated using the Kapa mRNA Hyperprep kit (Roche).
ENA-FIRST-PUBLIC
2019-08-23T17:03:50Z
ENA-LAST-UPDATE
2019-08-23T10:24:59Z
External Id
SAMEA5883869
INSDC center name
UCL Infection&Immunity Division
INSDC first public
2019-08-23T17:03:50Z
INSDC last update
2019-08-23T10:24:59Z
INSDC status
public
Submitter Id
E-MTAB-68451566551630:PR087_S7
age
24
broker name
ArrayExpress
common name
human
interferon gamma release assay
negative
organism part
blood
preventative tuberculosis treatment
no
progressor status (median follow-up 1.9 years)
non-progressor
progressor status (median follow-up 346 days)
non-progressor
roe et al 2019 subset (median follow-up 346 days)
no
sample name
E-MTAB-68451566551630:PR087_S7
scientific_name
Homo sapiens
sex
female
ERS3672326
SAMEA5883870
PR025_S5
9606
Homo sapiens
Protocols: Close contacts of patients with active tuberculosis (TB) were recruited from multiple TB clinics in London. At enrolment, peripheral blood RNA was collected into Tempus tubes. Total blood RNA was extracted using the Tempus Spin RNA Isolation Kit (Ambion; Life Technologies). Globin mRNA and genomic DNA were removed using the GlobinClear kit (Life Technologies) and the TURBO DNAfree kit (Ambion, Life Technologies), respectively. cDNA libraries were generated using the Kapa mRNA Hyperprep kit (Roche).
ENA-FIRST-PUBLIC
2019-08-23T17:03:50Z
ENA-LAST-UPDATE
2019-08-23T10:24:59Z
External Id
SAMEA5883870
INSDC center name
UCL Infection&Immunity Division
INSDC first public
2019-08-23T17:03:50Z
INSDC last update
2019-08-23T10:24:59Z
INSDC status
public
Submitter Id
E-MTAB-68451566551630:PR025_S5
age
45
broker name
ArrayExpress
common name
human
interferon gamma release assay
negative
organism part
blood
preventative tuberculosis treatment
no
progressor status (median follow-up 1.9 years)
non-progressor
progressor status (median follow-up 346 days)
non-progressor
roe et al 2019 subset (median follow-up 346 days)
no
sample name
E-MTAB-68451566551630:PR025_S5
scientific_name
Homo sapiens
sex
female
ERS3672327
SAMEA5883871
PR050_S11
9606
Homo sapiens
Protocols: Close contacts of patients with active tuberculosis (TB) were recruited from multiple TB clinics in London. At enrolment, peripheral blood RNA was collected into Tempus tubes. Total blood RNA was extracted using the Tempus Spin RNA Isolation Kit (Ambion; Life Technologies). Globin mRNA and genomic DNA were removed using the GlobinClear kit (Life Technologies) and the TURBO DNAfree kit (Ambion, Life Technologies), respectively. cDNA libraries were generated using the Kapa mRNA Hyperprep kit (Roche).
ENA-FIRST-PUBLIC
2019-08-23T17:03:50Z
ENA-LAST-UPDATE
2019-08-23T10:24:59Z
External Id
SAMEA5883871
INSDC center name
UCL Infection&Immunity Division
INSDC first public
2019-08-23T17:03:50Z
INSDC last update
2019-08-23T10:24:59Z
INSDC status
public
Submitter Id
E-MTAB-68451566551630:PR050_S11
age
26
broker name
ArrayExpress
common name
human
interferon gamma release assay
negative
organism part
blood
preventative tuberculosis treatment
no
progressor status (median follow-up 1.9 years)
non-progressor
progressor status (median follow-up 346 days)
non-progressor
roe et al 2019 subset (median follow-up 346 days)
no
sample name
E-MTAB-68451566551630:PR050_S11
scientific_name
Homo sapiens
sex
male
ERS3672328
SAMEA5883872
PR252_S23
9606
Homo sapiens
Protocols: Close contacts of patients with active tuberculosis (TB) were recruited from multiple TB clinics in London. At enrolment, peripheral blood RNA was collected into Tempus tubes. Total blood RNA was extracted using the Tempus Spin RNA Isolation Kit (Ambion; Life Technologies). Globin mRNA and genomic DNA were removed using the GlobinClear kit (Life Technologies) and the TURBO DNAfree kit (Ambion, Life Technologies), respectively. cDNA libraries were generated using the Kapa mRNA Hyperprep kit (Roche).
ENA-FIRST-PUBLIC
2019-08-23T17:03:50Z
ENA-LAST-UPDATE
2019-08-23T10:24:59Z
External Id
SAMEA5883872
INSDC center name
UCL Infection&Immunity Division
INSDC first public
2019-08-23T17:03:50Z
INSDC last update
2019-08-23T10:24:59Z
INSDC status
public
Submitter Id
E-MTAB-68451566551630:PR252_S23
age
29
broker name
ArrayExpress
common name
human
interferon gamma release assay
negative
organism part
blood
preventative tuberculosis treatment
no
progressor status (median follow-up 1.9 years)
non-progressor
progressor status (median follow-up 346 days)
non-progressor
roe et al 2019 subset (median follow-up 346 days)
no
sample name
E-MTAB-68451566551630:PR252_S23
scientific_name
Homo sapiens
sex
female
ERS3672329
SAMEA5883873
PR097_S15
9606
Homo sapiens
Protocols: Close contacts of patients with active tuberculosis (TB) were recruited from multiple TB clinics in London. At enrolment, peripheral blood RNA was collected into Tempus tubes. Total blood RNA was extracted using the Tempus Spin RNA Isolation Kit (Ambion; Life Technologies). Globin mRNA and genomic DNA were removed using the GlobinClear kit (Life Technologies) and the TURBO DNAfree kit (Ambion, Life Technologies), respectively. cDNA libraries were generated using the Kapa mRNA Hyperprep kit (Roche).
ENA-FIRST-PUBLIC
2019-08-23T17:03:50Z
ENA-LAST-UPDATE
2019-08-23T10:24:59Z
External Id
SAMEA5883873
INSDC center name
UCL Infection&Immunity Division
INSDC first public
2019-08-23T17:03:50Z
INSDC last update
2019-08-23T10:24:59Z
INSDC status
public
Submitter Id
E-MTAB-68451566551630:PR097_S15
age
29
broker name
ArrayExpress
common name
human
interferon gamma release assay
negative
organism part
blood
preventative tuberculosis treatment
no
progressor status (median follow-up 1.9 years)
non-progressor
progressor status (median follow-up 346 days)
non-progressor
roe et al 2019 subset (median follow-up 346 days)
no
sample name
E-MTAB-68451566551630:PR097_S15
scientific_name
Homo sapiens
sex
male
ERS3672330
SAMEA5883874
PR350_S15
9606
Homo sapiens
Protocols: Close contacts of patients with active tuberculosis (TB) were recruited from multiple TB clinics in London. At enrolment, peripheral blood RNA was collected into Tempus tubes. Total blood RNA was extracted using the Tempus Spin RNA Isolation Kit (Ambion; Life Technologies). Globin mRNA and genomic DNA were removed using the GlobinClear kit (Life Technologies) and the TURBO DNAfree kit (Ambion, Life Technologies), respectively. cDNA libraries were generated using the Kapa mRNA Hyperprep kit (Roche).
ENA-FIRST-PUBLIC
2019-08-23T17:03:50Z
ENA-LAST-UPDATE
2019-08-23T10:24:59Z
External Id
SAMEA5883874
INSDC center name
UCL Infection&Immunity Division
INSDC first public
2019-08-23T17:03:50Z
INSDC last update
2019-08-23T10:24:59Z
INSDC status
public
Submitter Id
E-MTAB-68451566551630:PR350_S15
age
28
broker name
ArrayExpress
common name
human
interferon gamma release assay
positive
organism part
blood
preventative tuberculosis treatment
yes
progressor status (median follow-up 1.9 years)
non-progressor
progressor status (median follow-up 346 days)
non-progressor
roe et al 2019 subset (median follow-up 346 days)
no
sample name
E-MTAB-68451566551630:PR350_S15
scientific_name
Homo sapiens
sex
male
ERS3672331
SAMEA5883875
PR162_S17
9606
Homo sapiens
Protocols: Close contacts of patients with active tuberculosis (TB) were recruited from multiple TB clinics in London. At enrolment, peripheral blood RNA was collected into Tempus tubes. Total blood RNA was extracted using the Tempus Spin RNA Isolation Kit (Ambion; Life Technologies). Globin mRNA and genomic DNA were removed using the GlobinClear kit (Life Technologies) and the TURBO DNAfree kit (Ambion, Life Technologies), respectively. cDNA libraries were generated using the Kapa mRNA Hyperprep kit (Roche).
ENA-FIRST-PUBLIC
2019-08-23T17:03:50Z
ENA-LAST-UPDATE
2019-08-23T10:24:59Z
External Id
SAMEA5883875
INSDC center name
UCL Infection&Immunity Division
INSDC first public
2019-08-23T17:03:50Z
INSDC last update
2019-08-23T10:24:59Z
INSDC status
public
Submitter Id
E-MTAB-68451566551630:PR162_S17
age
26
broker name
ArrayExpress
common name
human
interferon gamma release assay
negative
organism part
blood
preventative tuberculosis treatment
no
progressor status (median follow-up 1.9 years)
non-progressor
progressor status (median follow-up 346 days)
non-progressor
roe et al 2019 subset (median follow-up 346 days)
no
sample name
E-MTAB-68451566551630:PR162_S17
scientific_name
Homo sapiens
sex
female
ERS3672332
SAMEA5883876
PR239_S20
9606
Homo sapiens
Protocols: Close contacts of patients with active tuberculosis (TB) were recruited from multiple TB clinics in London. At enrolment, peripheral blood RNA was collected into Tempus tubes. Total blood RNA was extracted using the Tempus Spin RNA Isolation Kit (Ambion; Life Technologies). Globin mRNA and genomic DNA were removed using the GlobinClear kit (Life Technologies) and the TURBO DNAfree kit (Ambion, Life Technologies), respectively. cDNA libraries were generated using the Kapa mRNA Hyperprep kit (Roche).
ENA-FIRST-PUBLIC
2019-08-23T17:03:50Z
ENA-LAST-UPDATE
2019-08-23T10:24:59Z
External Id
SAMEA5883876
INSDC center name
UCL Infection&Immunity Division
INSDC first public
2019-08-23T17:03:50Z
INSDC last update
2019-08-23T10:24:59Z
INSDC status
public
Submitter Id
E-MTAB-68451566551630:PR239_S20
age
17
broker name
ArrayExpress
common name
human
interferon gamma release assay
negative
organism part
blood
preventative tuberculosis treatment
no
progressor status (median follow-up 1.9 years)
non-progressor
progressor status (median follow-up 346 days)
non-progressor
roe et al 2019 subset (median follow-up 346 days)
no
sample name
E-MTAB-68451566551630:PR239_S20
scientific_name
Homo sapiens
sex
male
ERS3672333
SAMEA5883877
PR198_S2
9606
Homo sapiens
Protocols: Close contacts of patients with active tuberculosis (TB) were recruited from multiple TB clinics in London. At enrolment, peripheral blood RNA was collected into Tempus tubes. Total blood RNA was extracted using the Tempus Spin RNA Isolation Kit (Ambion; Life Technologies). Globin mRNA and genomic DNA were removed using the GlobinClear kit (Life Technologies) and the TURBO DNAfree kit (Ambion, Life Technologies), respectively. cDNA libraries were generated using the Kapa mRNA Hyperprep kit (Roche).
ENA-FIRST-PUBLIC
2019-08-23T17:03:50Z
ENA-LAST-UPDATE
2019-08-23T10:24:59Z
External Id
SAMEA5883877
INSDC center name
UCL Infection&Immunity Division
INSDC first public
2019-08-23T17:03:50Z
INSDC last update
2019-08-23T10:24:59Z
INSDC status
public
Submitter Id
E-MTAB-68451566551630:PR198_S2
age
22
broker name
ArrayExpress
common name
human
interferon gamma release assay
negative
organism part
blood
preventative tuberculosis treatment
no
progressor status (median follow-up 1.9 years)
non-progressor
progressor status (median follow-up 346 days)
non-progressor
roe et al 2019 subset (median follow-up 346 days)
no
sample name
E-MTAB-68451566551630:PR198_S2
scientific_name
Homo sapiens
sex
male
ERS3672334
SAMEA5883878
PR062_S19
9606
Homo sapiens
Protocols: Close contacts of patients with active tuberculosis (TB) were recruited from multiple TB clinics in London. At enrolment, peripheral blood RNA was collected into Tempus tubes. Total blood RNA was extracted using the Tempus Spin RNA Isolation Kit (Ambion; Life Technologies). Globin mRNA and genomic DNA were removed using the GlobinClear kit (Life Technologies) and the TURBO DNAfree kit (Ambion, Life Technologies), respectively. cDNA libraries were generated using the Kapa mRNA Hyperprep kit (Roche).
ENA-FIRST-PUBLIC
2019-08-23T17:03:50Z
ENA-LAST-UPDATE
2019-08-23T10:24:59Z
External Id
SAMEA5883878
INSDC center name
UCL Infection&Immunity Division
INSDC first public
2019-08-23T17:03:50Z
INSDC last update
2019-08-23T10:24:59Z
INSDC status
public
Submitter Id
E-MTAB-68451566551630:PR062_S19
age
35
broker name
ArrayExpress
common name
human
interferon gamma release assay
positive
organism part
blood
preventative tuberculosis treatment
yes
progressor status (median follow-up 1.9 years)
non-progressor
progressor status (median follow-up 346 days)
non-progressor
roe et al 2019 subset (median follow-up 346 days)
yes
sample name
E-MTAB-68451566551630:PR062_S19
scientific_name
Homo sapiens
sex
male
ERS3672335
SAMEA5883879
PR034_S7
9606
Homo sapiens
Protocols: Close contacts of patients with active tuberculosis (TB) were recruited from multiple TB clinics in London. At enrolment, peripheral blood RNA was collected into Tempus tubes. Total blood RNA was extracted using the Tempus Spin RNA Isolation Kit (Ambion; Life Technologies). Globin mRNA and genomic DNA were removed using the GlobinClear kit (Life Technologies) and the TURBO DNAfree kit (Ambion, Life Technologies), respectively. cDNA libraries were generated using the Kapa mRNA Hyperprep kit (Roche).
ENA-FIRST-PUBLIC
2019-08-23T17:03:50Z
ENA-LAST-UPDATE
2019-08-23T10:24:59Z
External Id
SAMEA5883879
INSDC center name
UCL Infection&Immunity Division
INSDC first public
2019-08-23T17:03:50Z
INSDC last update
2019-08-23T10:24:59Z
INSDC status
public
Submitter Id
E-MTAB-68451566551630:PR034_S7
age
31
broker name
ArrayExpress
common name
human
interferon gamma release assay
positive
organism part
blood
preventative tuberculosis treatment
yes
progressor status (median follow-up 1.9 years)
non-progressor
progressor status (median follow-up 346 days)
non-progressor
roe et al 2019 subset (median follow-up 346 days)
yes
sample name
E-MTAB-68451566551630:PR034_S7
scientific_name
Homo sapiens
sex
male
ERS3672336
SAMEA5883880
PR009_S2
9606
Homo sapiens
Protocols: Close contacts of patients with active tuberculosis (TB) were recruited from multiple TB clinics in London. At enrolment, peripheral blood RNA was collected into Tempus tubes. Total blood RNA was extracted using the Tempus Spin RNA Isolation Kit (Ambion; Life Technologies). Globin mRNA and genomic DNA were removed using the GlobinClear kit (Life Technologies) and the TURBO DNAfree kit (Ambion, Life Technologies), respectively. cDNA libraries were generated using the Kapa mRNA Hyperprep kit (Roche).
ENA-FIRST-PUBLIC
2019-08-23T17:03:50Z
ENA-LAST-UPDATE
2019-08-23T10:24:59Z
External Id
SAMEA5883880
INSDC center name
UCL Infection&Immunity Division
INSDC first public
2019-08-23T17:03:50Z
INSDC last update
2019-08-23T10:24:59Z
INSDC status
public
Submitter Id
E-MTAB-68451566551630:PR009_S2
age
19
broker name
ArrayExpress
common name
human
interferon gamma release assay
positive
organism part
blood
preventative tuberculosis treatment
yes
progressor status (median follow-up 1.9 years)
non-progressor
progressor status (median follow-up 346 days)
non-progressor
roe et al 2019 subset (median follow-up 346 days)
yes
sample name
E-MTAB-68451566551630:PR009_S2
scientific_name
Homo sapiens
sex
female
ERS3672337
SAMEA5883881
PR085_S11
9606
Homo sapiens
Protocols: Close contacts of patients with active tuberculosis (TB) were recruited from multiple TB clinics in London. At enrolment, peripheral blood RNA was collected into Tempus tubes. Total blood RNA was extracted using the Tempus Spin RNA Isolation Kit (Ambion; Life Technologies). Globin mRNA and genomic DNA were removed using the GlobinClear kit (Life Technologies) and the TURBO DNAfree kit (Ambion, Life Technologies), respectively. cDNA libraries were generated using the Kapa mRNA Hyperprep kit (Roche).
ENA-FIRST-PUBLIC
2019-08-23T17:03:50Z
ENA-LAST-UPDATE
2019-08-23T10:24:59Z
External Id
SAMEA5883881
INSDC center name
UCL Infection&Immunity Division
INSDC first public
2019-08-23T17:03:50Z
INSDC last update
2019-08-23T10:24:59Z
INSDC status
public
Submitter Id
E-MTAB-68451566551630:PR085_S11
age
23
broker name
ArrayExpress
common name
human
interferon gamma release assay
positive
organism part
blood
preventative tuberculosis treatment
yes
progressor status (median follow-up 1.9 years)
non-progressor
progressor status (median follow-up 346 days)
non-progressor
roe et al 2019 subset (median follow-up 346 days)
yes
sample name
E-MTAB-68451566551630:PR085_S11
scientific_name
Homo sapiens
sex
female
ERS3672338
SAMEA5883882
PR165_S15
9606
Homo sapiens
Protocols: Close contacts of patients with active tuberculosis (TB) were recruited from multiple TB clinics in London. At enrolment, peripheral blood RNA was collected into Tempus tubes. Total blood RNA was extracted using the Tempus Spin RNA Isolation Kit (Ambion; Life Technologies). Globin mRNA and genomic DNA were removed using the GlobinClear kit (Life Technologies) and the TURBO DNAfree kit (Ambion, Life Technologies), respectively. cDNA libraries were generated using the Kapa mRNA Hyperprep kit (Roche).
ENA-FIRST-PUBLIC
2019-08-23T17:03:50Z
ENA-LAST-UPDATE
2019-08-23T10:24:59Z
External Id
SAMEA5883882
INSDC center name
UCL Infection&Immunity Division
INSDC first public
2019-08-23T17:03:50Z
INSDC last update
2019-08-23T10:24:59Z
INSDC status
public
Submitter Id
E-MTAB-68451566551630:PR165_S15
age
29
broker name
ArrayExpress
common name
human
interferon gamma release assay
positive
organism part
blood
preventative tuberculosis treatment
yes
progressor status (median follow-up 1.9 years)
non-progressor
progressor status (median follow-up 346 days)
non-progressor
roe et al 2019 subset (median follow-up 346 days)
yes
sample name
E-MTAB-68451566551630:PR165_S15
scientific_name
Homo sapiens
sex
female
ERS3672339
SAMEA5883883
PR121_S18
9606
Homo sapiens
Protocols: Close contacts of patients with active tuberculosis (TB) were recruited from multiple TB clinics in London. At enrolment, peripheral blood RNA was collected into Tempus tubes. Total blood RNA was extracted using the Tempus Spin RNA Isolation Kit (Ambion; Life Technologies). Globin mRNA and genomic DNA were removed using the GlobinClear kit (Life Technologies) and the TURBO DNAfree kit (Ambion, Life Technologies), respectively. cDNA libraries were generated using the Kapa mRNA Hyperprep kit (Roche).
ENA-FIRST-PUBLIC
2019-08-23T17:03:50Z
ENA-LAST-UPDATE
2019-08-23T10:24:59Z
External Id
SAMEA5883883
INSDC center name
UCL Infection&Immunity Division
INSDC first public
2019-08-23T17:03:50Z
INSDC last update
2019-08-23T10:24:59Z
INSDC status
public
Submitter Id
E-MTAB-68451566551630:PR121_S18
age
31
broker name
ArrayExpress
common name
human
interferon gamma release assay
positive
organism part
blood
preventative tuberculosis treatment
yes
progressor status (median follow-up 1.9 years)
non-progressor
progressor status (median follow-up 346 days)
non-progressor
roe et al 2019 subset (median follow-up 346 days)
yes
sample name
E-MTAB-68451566551630:PR121_S18
scientific_name
Homo sapiens
sex
male