ERS14933930 SAMEA112933330 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205151. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933330 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28610_1680015411 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 84.81 completeness software checkM_v1.1 contamination score 0.63 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205151 of study SRP200540. sample derived from SAMN11949715 sample name MGG28610_1680015411 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933931 SAMEA112933331 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205151. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933331 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28611_1680015353 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 87.25 completeness software checkM_v1.1 contamination score 2.68 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205151 of study SRP200540. sample derived from SAMN11949715 sample name MGG28611_1680015353 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933932 SAMEA112933332 195049 uncultured Clostridiaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205151. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933332 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28612_1680015408 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 84.58 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205151 of study SRP200540. sample derived from SAMN11949715 sample name MGG28612_1680015408 scientific_name uncultured Clostridiaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933933 SAMEA112933333 1545742 uncultured Christensenella sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205151. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933333 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28613_1680015394 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 89.15 completeness software checkM_v1.1 contamination score 0.5 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205151 of study SRP200540. sample derived from SAMN11949715 sample name MGG28613_1680015394 scientific_name uncultured Christensenella sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933934 SAMEA112933334 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205151. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933334 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28614_1680015391 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 87.63 completeness software checkM_v1.1 contamination score 1.68 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205151 of study SRP200540. sample derived from SAMN11949715 sample name MGG28614_1680015391 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933935 SAMEA112933335 151781 Lactobacillus intestinalis This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205151. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933335 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28616_1680015407 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 73.3 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205151 of study SRP200540. sample derived from SAMN11949715 sample name MGG28616_1680015407 scientific_name Lactobacillus intestinalis sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933936 SAMEA112933336 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205151. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933336 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28617_1680015377 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 91.43 completeness software checkM_v1.1 contamination score 0.57 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205151 of study SRP200540. sample derived from SAMN11949715 sample name MGG28617_1680015377 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933937 SAMEA112933337 77133 uncultured bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205151. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933337 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28618_1680015422 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 97.99 completeness software checkM_v1.1 contamination score 9.4 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205151 of study SRP200540. sample derived from SAMN11949715 sample name MGG28618_1680015422 scientific_name uncultured bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933938 SAMEA112933338 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205151. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933338 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28619_1680015392 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 77.01 completeness software checkM_v1.1 contamination score 1.15 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205151 of study SRP200540. sample derived from SAMN11949715 sample name MGG28619_1680015392 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933939 SAMEA112933339 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205151. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933339 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28620_1680015407 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 95.4 completeness software checkM_v1.1 contamination score 1.41 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205151 of study SRP200540. sample derived from SAMN11949715 sample name MGG28620_1680015407 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933940 SAMEA112933340 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205151. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933340 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28621_1680015356 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 85.63 completeness software checkM_v1.1 contamination score 1.15 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205151 of study SRP200540. sample derived from SAMN11949715 sample name MGG28621_1680015356 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933941 SAMEA112933341 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205151. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933341 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28622_1680015358 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 95.57 completeness software checkM_v1.1 contamination score 0.16 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205151 of study SRP200540. sample derived from SAMN11949715 sample name MGG28622_1680015358 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933942 SAMEA112933342 165185 uncultured Eubacterium sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205151. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933342 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28623_1680015361 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 86.67 completeness software checkM_v1.1 contamination score 1.72 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205151 of study SRP200540. sample derived from SAMN11949715 sample name MGG28623_1680015361 scientific_name uncultured Eubacterium sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933943 SAMEA112933343 512314 uncultured Roseburia sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205151. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933343 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28624_1680015337 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 97.58 completeness software checkM_v1.1 contamination score 1.57 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205151 of study SRP200540. sample derived from SAMN11949715 sample name MGG28624_1680015337 scientific_name uncultured Roseburia sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933944 SAMEA112933344 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205151. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933344 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28625_1680015361 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 96.96 completeness software checkM_v1.1 contamination score 2.49 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205151 of study SRP200540. sample derived from SAMN11949715 sample name MGG28625_1680015361 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933945 SAMEA112933345 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205151. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933345 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28626_1680015390 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 57.1 completeness software checkM_v1.1 contamination score 0.48 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205151 of study SRP200540. sample derived from SAMN11949715 sample name MGG28626_1680015390 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933946 SAMEA112933346 239935 Akkermansia muciniphila This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205151. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933346 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28627_1680015411 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 93.88 completeness software checkM_v1.1 contamination score 0.68 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205151 of study SRP200540. sample derived from SAMN11949715 sample name MGG28627_1680015411 scientific_name Akkermansia muciniphila sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933947 SAMEA112933347 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205151. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933347 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28628_1680015387 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 94.12 completeness software checkM_v1.1 contamination score 1.72 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205151 of study SRP200540. sample derived from SAMN11949715 sample name MGG28628_1680015387 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933948 SAMEA112933348 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205151. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933348 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28629_1680015434 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 92.17 completeness software checkM_v1.1 contamination score 0.57 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205151 of study SRP200540. sample derived from SAMN11949715 sample name MGG28629_1680015434 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933949 SAMEA112933349 1598 Limosilactobacillus reuteri This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205151. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933349 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28630_1680015398 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 99.46 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205151 of study SRP200540. sample derived from SAMN11949715 sample name MGG28630_1680015398 scientific_name Limosilactobacillus reuteri sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933950 SAMEA112933350 286138 uncultured Dorea sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205151. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933350 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28631_1680015410 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 71.93 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205151 of study SRP200540. sample derived from SAMN11949715 sample name MGG28631_1680015410 scientific_name uncultured Dorea sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933951 SAMEA112933351 1545742 uncultured Christensenella sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205151. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933351 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28632_1680015406 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 67.34 completeness software checkM_v1.1 contamination score 0.86 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205151 of study SRP200540. sample derived from SAMN11949715 sample name MGG28632_1680015406 scientific_name uncultured Christensenella sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933952 SAMEA112933352 286138 uncultured Dorea sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205151. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933352 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28633_1680015365 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 80.2 completeness software checkM_v1.1 contamination score 1.85 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205151 of study SRP200540. sample derived from SAMN11949715 sample name MGG28633_1680015365 scientific_name uncultured Dorea sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933953 SAMEA112933353 328812 Parabacteroides goldsteinii This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205151. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933353 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28634_1680015390 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 72.48 completeness software checkM_v1.1 contamination score 0.97 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205151 of study SRP200540. sample derived from SAMN11949715 sample name MGG28634_1680015390 scientific_name Parabacteroides goldsteinii sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933954 SAMEA112933354 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205151. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933354 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28635_1680015415 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 79.0 completeness software checkM_v1.1 contamination score 1.14 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205151 of study SRP200540. sample derived from SAMN11949715 sample name MGG28635_1680015415 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933955 SAMEA112933355 248039 Mucispirillum schaedleri This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205151. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933355 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28636_1680015364 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 91.15 completeness software checkM_v1.1 contamination score 3.88 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205151 of study SRP200540. sample derived from SAMN11949715 sample name MGG28636_1680015364 scientific_name Mucispirillum schaedleri sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933956 SAMEA112933356 195049 uncultured Clostridiaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205151. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933356 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28637_1680015427 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 78.35 completeness software checkM_v1.1 contamination score 0.95 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205151 of study SRP200540. sample derived from SAMN11949715 sample name MGG28637_1680015427 scientific_name uncultured Clostridiaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933957 SAMEA112933357 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205151. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933357 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28638_1680015402 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 80.03 completeness software checkM_v1.1 contamination score 1.17 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205151 of study SRP200540. sample derived from SAMN11949715 sample name MGG28638_1680015402 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933958 SAMEA112933358 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205151. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933358 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28639_1680015403 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 78.44 completeness software checkM_v1.1 contamination score 1.96 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205151 of study SRP200540. sample derived from SAMN11949715 sample name MGG28639_1680015403 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933959 SAMEA112933359 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205151. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933359 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28640_1680015376 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 71.74 completeness software checkM_v1.1 contamination score 3.47 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205151 of study SRP200540. sample derived from SAMN11949715 sample name MGG28640_1680015376 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933960 SAMEA112933360 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205152. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933360 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28641_1680015407 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 64.01 completeness software checkM_v1.1 contamination score 2.71 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205152 of study SRP200540. sample derived from SAMN11949718 sample name MGG28641_1680015407 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933961 SAMEA112933361 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205152. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933361 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28642_1680015371 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 94.85 completeness software checkM_v1.1 contamination score 2.35 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205152 of study SRP200540. sample derived from SAMN11949718 sample name MGG28642_1680015371 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933962 SAMEA112933362 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205152. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933362 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28643_1680015338 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 81.64 completeness software checkM_v1.1 contamination score 2.01 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205152 of study SRP200540. sample derived from SAMN11949718 sample name MGG28643_1680015338 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933963 SAMEA112933363 876091 uncultured Oscillibacter sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205152. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933363 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28644_1680015391 assembly quality Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 97.65 completeness software checkM_v1.1 contamination score 0.67 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205152 of study SRP200540. sample derived from SAMN11949718 sample name MGG28644_1680015391 scientific_name uncultured Oscillibacter sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933964 SAMEA112933364 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205152. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933364 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28645_1680015355 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 75.1 completeness software checkM_v1.1 contamination score 0.86 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205152 of study SRP200540. sample derived from SAMN11949718 sample name MGG28645_1680015355 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933965 SAMEA112933365 371601 Bacteroides xylanisolvens This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205152. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933365 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28646_1680015418 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 94.69 completeness software checkM_v1.1 contamination score 1.01 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205152 of study SRP200540. sample derived from SAMN11949718 sample name MGG28646_1680015418 scientific_name Bacteroides xylanisolvens sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933966 SAMEA112933366 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205152. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933366 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28647_1680015426 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 65.52 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205152 of study SRP200540. sample derived from SAMN11949718 sample name MGG28647_1680015426 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933967 SAMEA112933367 1545742 uncultured Christensenella sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205152. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933367 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28648_1680015412 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 67.34 completeness software checkM_v1.1 contamination score 0.81 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205152 of study SRP200540. sample derived from SAMN11949718 sample name MGG28648_1680015412 scientific_name uncultured Christensenella sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933968 SAMEA112933368 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205152. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933368 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28649_1680015386 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 90.8 completeness software checkM_v1.1 contamination score 1.41 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205152 of study SRP200540. sample derived from SAMN11949718 sample name MGG28649_1680015386 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933969 SAMEA112933369 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205152. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933369 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28650_1680015349 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 96.62 completeness software checkM_v1.1 contamination score 1.69 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205152 of study SRP200540. sample derived from SAMN11949718 sample name MGG28650_1680015349 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933970 SAMEA112933370 195049 uncultured Clostridiaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205152. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933370 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28651_1680015398 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 73.82 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205152 of study SRP200540. sample derived from SAMN11949718 sample name MGG28651_1680015398 scientific_name uncultured Clostridiaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933971 SAMEA112933371 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205152. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933371 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28652_1680015402 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 93.31 completeness software checkM_v1.1 contamination score 0.63 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205152 of study SRP200540. sample derived from SAMN11949718 sample name MGG28652_1680015402 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933972 SAMEA112933372 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205152. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933372 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:09Z INSDC last update 2023-04-23T00:20:09Z INSDC status public Submitter Id MGG28654_1680015374 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 87.93 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205152 of study SRP200540. sample derived from SAMN11949718 sample name MGG28654_1680015374 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933973 SAMEA112933373 512314 uncultured Roseburia sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205152. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933373 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:09Z INSDC last update 2023-04-23T00:20:09Z INSDC status public Submitter Id MGG28656_1680015389 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 90.82 completeness software checkM_v1.1 contamination score 1.57 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205152 of study SRP200540. sample derived from SAMN11949718 sample name MGG28656_1680015389 scientific_name uncultured Roseburia sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933974 SAMEA112933374 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205152. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933374 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:09Z INSDC last update 2023-04-23T00:20:09Z INSDC status public Submitter Id MGG28657_1680015403 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 63.79 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205152 of study SRP200540. sample derived from SAMN11949718 sample name MGG28657_1680015403 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933975 SAMEA112933375 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205152. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933375 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:09Z INSDC last update 2023-04-23T00:20:09Z INSDC status public Submitter Id MGG28658_1680015352 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 95.22 completeness software checkM_v1.1 contamination score 0.86 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205152 of study SRP200540. sample derived from SAMN11949718 sample name MGG28658_1680015352 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933976 SAMEA112933376 1671927 uncultured Acetatifactor sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205152. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933376 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:09Z INSDC last update 2023-04-23T00:20:09Z INSDC status public Submitter Id MGG28659_1680015419 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 83.91 completeness software checkM_v1.1 contamination score 2.3 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205152 of study SRP200540. sample derived from SAMN11949718 sample name MGG28659_1680015419 scientific_name uncultured Acetatifactor sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933977 SAMEA112933377 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205152. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933377 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:09Z INSDC last update 2023-04-23T00:20:09Z INSDC status public Submitter Id MGG28660_1680015396 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 94.83 completeness software checkM_v1.1 contamination score 1.15 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205152 of study SRP200540. sample derived from SAMN11949718 sample name MGG28660_1680015396 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933978 SAMEA112933378 248039 Mucispirillum schaedleri This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205152. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933378 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:09Z INSDC last update 2023-04-23T00:20:09Z INSDC status public Submitter Id MGG28661_1680015369 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 97.41 completeness software checkM_v1.1 contamination score 2.59 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205152 of study SRP200540. sample derived from SAMN11949718 sample name MGG28661_1680015369 scientific_name Mucispirillum schaedleri sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933979 SAMEA112933379 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205152. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933379 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28662_1680015412 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 90.36 completeness software checkM_v1.1 contamination score 4.5 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205152 of study SRP200540. sample derived from SAMN11949718 sample name MGG28662_1680015412 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933980 SAMEA112933380 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205152. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933380 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28663_1680015353 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 86.71 completeness software checkM_v1.1 contamination score 1.27 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205152 of study SRP200540. sample derived from SAMN11949718 sample name MGG28663_1680015353 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933981 SAMEA112933381 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205152. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933381 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28664_1680015376 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 87.17 completeness software checkM_v1.1 contamination score 1.72 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205152 of study SRP200540. sample derived from SAMN11949718 sample name MGG28664_1680015376 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933982 SAMEA112933382 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205152. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933382 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28665_1680015379 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 93.2 completeness software checkM_v1.1 contamination score 0.97 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205152 of study SRP200540. sample derived from SAMN11949718 sample name MGG28665_1680015379 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933983 SAMEA112933383 244328 uncultured Clostridia bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205152. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933383 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28666_1680015407 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 94.97 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205152 of study SRP200540. sample derived from SAMN11949718 sample name MGG28666_1680015407 scientific_name uncultured Clostridia bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933984 SAMEA112933384 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205152. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933384 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28667_1680015362 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 92.05 completeness software checkM_v1.1 contamination score 3.24 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205152 of study SRP200540. sample derived from SAMN11949718 sample name MGG28667_1680015362 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933985 SAMEA112933385 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205152. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933385 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28668_1680015357 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 90.23 completeness software checkM_v1.1 contamination score 2.56 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205152 of study SRP200540. sample derived from SAMN11949718 sample name MGG28668_1680015357 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933986 SAMEA112933386 1598 Limosilactobacillus reuteri This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205152. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933386 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28669_1680015437 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 93.19 completeness software checkM_v1.1 contamination score 3.44 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205152 of study SRP200540. sample derived from SAMN11949718 sample name MGG28669_1680015437 scientific_name Limosilactobacillus reuteri sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933987 SAMEA112933387 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205152. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933387 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28670_1680015341 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 83.85 completeness software checkM_v1.1 contamination score 1.9 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205152 of study SRP200540. sample derived from SAMN11949718 sample name MGG28670_1680015341 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933988 SAMEA112933388 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205152. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933388 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28671_1680015346 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 76.73 completeness software checkM_v1.1 contamination score 4.58 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205152 of study SRP200540. sample derived from SAMN11949718 sample name MGG28671_1680015346 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933989 SAMEA112933389 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205152. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933389 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28672_1680015386 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 75.54 completeness software checkM_v1.1 contamination score 2.32 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205152 of study SRP200540. sample derived from SAMN11949718 sample name MGG28672_1680015386 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933990 SAMEA112933390 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205152. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933390 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28673_1680015365 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 90.49 completeness software checkM_v1.1 contamination score 1.27 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205152 of study SRP200540. sample derived from SAMN11949718 sample name MGG28673_1680015365 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933991 SAMEA112933391 1751881 uncultured Hungatella sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205152. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933391 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28674_1680015411 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 65.57 completeness software checkM_v1.1 contamination score 2.22 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205152 of study SRP200540. sample derived from SAMN11949718 sample name MGG28674_1680015411 scientific_name uncultured Hungatella sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933992 SAMEA112933392 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205152. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933392 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28675_1680015370 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 72.33 completeness software checkM_v1.1 contamination score 3.15 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205152 of study SRP200540. sample derived from SAMN11949718 sample name MGG28675_1680015370 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933993 SAMEA112933393 165186 uncultured Ruminococcus sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205152. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933393 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28676_1680015382 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 73.16 completeness software checkM_v1.1 contamination score 1.68 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205152 of study SRP200540. sample derived from SAMN11949718 sample name MGG28676_1680015382 scientific_name uncultured Ruminococcus sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933994 SAMEA112933394 1545742 uncultured Christensenella sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205154. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933394 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28677_1680015428 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 94.63 completeness software checkM_v1.1 contamination score 0.22 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205154 of study SRP200540. sample derived from SAMN11949720 sample name MGG28677_1680015428 scientific_name uncultured Christensenella sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933995 SAMEA112933395 1622 Ligilactobacillus murinus This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205154. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933395 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28678_1680015409 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 96.35 completeness software checkM_v1.1 contamination score 1.05 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205154 of study SRP200540. sample derived from SAMN11949720 sample name MGG28678_1680015409 scientific_name Ligilactobacillus murinus sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933996 SAMEA112933396 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205154. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933396 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28679_1680015415 assembly quality Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 95.86 completeness software checkM_v1.1 contamination score 2.48 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205154 of study SRP200540. sample derived from SAMN11949720 sample name MGG28679_1680015415 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933997 SAMEA112933397 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205154. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933397 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28682_1680015378 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 74.71 completeness software checkM_v1.1 contamination score 1.22 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205154 of study SRP200540. sample derived from SAMN11949720 sample name MGG28682_1680015378 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933998 SAMEA112933398 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205154. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933398 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28683_1680015402 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 89.96 completeness software checkM_v1.1 contamination score 1.63 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205154 of study SRP200540. sample derived from SAMN11949720 sample name MGG28683_1680015402 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14933999 SAMEA112933399 165185 uncultured Eubacterium sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205154. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933399 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28684_1680015337 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 91.28 completeness software checkM_v1.1 contamination score 0.67 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205154 of study SRP200540. sample derived from SAMN11949720 sample name MGG28684_1680015337 scientific_name uncultured Eubacterium sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934000 SAMEA112933400 165186 uncultured Ruminococcus sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205154. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933400 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28685_1680015354 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 98.66 completeness software checkM_v1.1 contamination score 0.67 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205154 of study SRP200540. sample derived from SAMN11949720 sample name MGG28685_1680015354 scientific_name uncultured Ruminococcus sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934001 SAMEA112933401 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205154. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933401 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28686_1680015417 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 93.63 completeness software checkM_v1.1 contamination score 0.57 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205154 of study SRP200540. sample derived from SAMN11949720 sample name MGG28686_1680015417 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934002 SAMEA112933402 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205154. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933402 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28689_1680015401 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 94.35 completeness software checkM_v1.1 contamination score 1.41 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205154 of study SRP200540. sample derived from SAMN11949720 sample name MGG28689_1680015401 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934003 SAMEA112933403 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205154. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933403 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28690_1680015419 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 94.83 completeness software checkM_v1.1 contamination score 0.57 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205154 of study SRP200540. sample derived from SAMN11949720 sample name MGG28690_1680015419 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934004 SAMEA112933404 328812 Parabacteroides goldsteinii This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205154. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933404 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28691_1680015416 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 75.38 completeness software checkM_v1.1 contamination score 0.51 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205154 of study SRP200540. sample derived from SAMN11949720 sample name MGG28691_1680015416 scientific_name Parabacteroides goldsteinii sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934005 SAMEA112933405 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205154. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933405 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28692_1680015423 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 93.71 completeness software checkM_v1.1 contamination score 2.9 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205154 of study SRP200540. sample derived from SAMN11949720 sample name MGG28692_1680015423 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934006 SAMEA112933406 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205154. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933406 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28693_1680015351 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 92.09 completeness software checkM_v1.1 contamination score 1.27 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205154 of study SRP200540. sample derived from SAMN11949720 sample name MGG28693_1680015351 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934007 SAMEA112933407 286138 uncultured Dorea sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205154. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933407 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28694_1680015395 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 91.13 completeness software checkM_v1.1 contamination score 6.82 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205154 of study SRP200540. sample derived from SAMN11949720 sample name MGG28694_1680015395 scientific_name uncultured Dorea sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934008 SAMEA112933408 77133 uncultured bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205154. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933408 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28695_1680015358 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 94.63 completeness software checkM_v1.1 contamination score 5.03 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205154 of study SRP200540. sample derived from SAMN11949720 sample name MGG28695_1680015358 scientific_name uncultured bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934009 SAMEA112933409 2163171 uncultured Kineothrix sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205154. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933409 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28696_1680015351 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 95.4 completeness software checkM_v1.1 contamination score 2.3 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205154 of study SRP200540. sample derived from SAMN11949720 sample name MGG28696_1680015351 scientific_name uncultured Kineothrix sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934010 SAMEA112933410 195049 uncultured Clostridiaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205154. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933410 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28697_1680015396 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 50.88 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205154 of study SRP200540. sample derived from SAMN11949720 sample name MGG28697_1680015396 scientific_name uncultured Clostridiaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934011 SAMEA112933411 512314 uncultured Roseburia sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205154. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933411 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28698_1680015340 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 95.56 completeness software checkM_v1.1 contamination score 1.81 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205154 of study SRP200540. sample derived from SAMN11949720 sample name MGG28698_1680015340 scientific_name uncultured Roseburia sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934012 SAMEA112933412 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205154. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933412 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28699_1680015399 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 93.17 completeness software checkM_v1.1 contamination score 2.57 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205154 of study SRP200540. sample derived from SAMN11949720 sample name MGG28699_1680015399 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934013 SAMEA112933413 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205154. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933413 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28700_1680015354 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 73.22 completeness software checkM_v1.1 contamination score 3.36 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205154 of study SRP200540. sample derived from SAMN11949720 sample name MGG28700_1680015354 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934014 SAMEA112933414 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205154. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933414 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28701_1680015402 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 94.03 completeness software checkM_v1.1 contamination score 2.3 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205154 of study SRP200540. sample derived from SAMN11949720 sample name MGG28701_1680015402 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934015 SAMEA112933415 876091 uncultured Oscillibacter sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205154. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933415 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28702_1680015368 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 93.62 completeness software checkM_v1.1 contamination score 1.34 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205154 of study SRP200540. sample derived from SAMN11949720 sample name MGG28702_1680015368 scientific_name uncultured Oscillibacter sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934016 SAMEA112933416 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205154. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933416 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28703_1680015343 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 95.24 completeness software checkM_v1.1 contamination score 2.85 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205154 of study SRP200540. sample derived from SAMN11949720 sample name MGG28703_1680015343 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934017 SAMEA112933417 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205154. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933417 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28704_1680015343 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 94.16 completeness software checkM_v1.1 contamination score 3.24 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205154 of study SRP200540. sample derived from SAMN11949720 sample name MGG28704_1680015343 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934018 SAMEA112933418 151781 Lactobacillus intestinalis This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205154. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933418 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28705_1680015414 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 97.65 completeness software checkM_v1.1 contamination score 1.62 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205154 of study SRP200540. sample derived from SAMN11949720 sample name MGG28705_1680015414 scientific_name Lactobacillus intestinalis sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934019 SAMEA112933419 1598 Limosilactobacillus reuteri This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205154. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933419 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28706_1680015387 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 96.11 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205154 of study SRP200540. sample derived from SAMN11949720 sample name MGG28706_1680015387 scientific_name Limosilactobacillus reuteri sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934020 SAMEA112933420 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205154. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933420 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28707_1680015386 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 76.17 completeness software checkM_v1.1 contamination score 3.93 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205154 of study SRP200540. sample derived from SAMN11949720 sample name MGG28707_1680015386 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934021 SAMEA112933421 195049 uncultured Clostridiaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205154. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933421 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28708_1680015387 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 74.16 completeness software checkM_v1.1 contamination score 1.27 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205154 of study SRP200540. sample derived from SAMN11949720 sample name MGG28708_1680015387 scientific_name uncultured Clostridiaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934022 SAMEA112933422 1545742 uncultured Christensenella sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205154. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933422 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28709_1680015384 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 75.04 completeness software checkM_v1.1 contamination score 4.05 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205154 of study SRP200540. sample derived from SAMN11949720 sample name MGG28709_1680015384 scientific_name uncultured Christensenella sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934023 SAMEA112933423 165185 uncultured Eubacterium sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205154. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933423 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28710_1680015372 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 68.48 completeness software checkM_v1.1 contamination score 1.82 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205154 of study SRP200540. sample derived from SAMN11949720 sample name MGG28710_1680015372 scientific_name uncultured Eubacterium sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934024 SAMEA112933424 248039 Mucispirillum schaedleri This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205154. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933424 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28711_1680015423 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 86.73 completeness software checkM_v1.1 contamination score 3.45 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205154 of study SRP200540. sample derived from SAMN11949720 sample name MGG28711_1680015423 scientific_name Mucispirillum schaedleri sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934025 SAMEA112933425 286138 uncultured Dorea sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205154. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933425 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28712_1680015428 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 74.9 completeness software checkM_v1.1 contamination score 2.05 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205154 of study SRP200540. sample derived from SAMN11949720 sample name MGG28712_1680015428 scientific_name uncultured Dorea sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934026 SAMEA112933426 165185 uncultured Eubacterium sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205154. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933426 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28713_1680015414 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 77.4 completeness software checkM_v1.1 contamination score 1.34 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205154 of study SRP200540. sample derived from SAMN11949720 sample name MGG28713_1680015414 scientific_name uncultured Eubacterium sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934027 SAMEA112933427 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205154. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933427 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28714_1680015395 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 77.24 completeness software checkM_v1.1 contamination score 3.32 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205154 of study SRP200540. sample derived from SAMN11949720 sample name MGG28714_1680015395 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934028 SAMEA112933428 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205154. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933428 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28715_1680015425 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 66.72 completeness software checkM_v1.1 contamination score 2.93 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205154 of study SRP200540. sample derived from SAMN11949720 sample name MGG28715_1680015425 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934029 SAMEA112933429 165185 uncultured Eubacterium sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205155. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933429 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28716_1680015426 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 59.65 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205155 of study SRP200540. sample derived from SAMN11949719 sample name MGG28716_1680015426 scientific_name uncultured Eubacterium sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934030 SAMEA112933430 876091 uncultured Oscillibacter sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205155. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933430 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28717_1680015396 assembly quality Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 92.95 completeness software checkM_v1.1 contamination score 0.67 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205155 of study SRP200540. sample derived from SAMN11949719 sample name MGG28717_1680015396 scientific_name uncultured Oscillibacter sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934031 SAMEA112933431 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205155. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933431 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28718_1680015339 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 78.65 completeness software checkM_v1.1 contamination score 3.19 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205155 of study SRP200540. sample derived from SAMN11949719 sample name MGG28718_1680015339 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934032 SAMEA112933432 195049 uncultured Clostridiaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205155. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933432 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28719_1680015396 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 82.05 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205155 of study SRP200540. sample derived from SAMN11949719 sample name MGG28719_1680015396 scientific_name uncultured Clostridiaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934033 SAMEA112933433 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205155. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933433 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28720_1680015366 assembly quality Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 98.88 completeness software checkM_v1.1 contamination score 3.02 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205155 of study SRP200540. sample derived from SAMN11949719 sample name MGG28720_1680015366 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934034 SAMEA112933434 371601 Bacteroides xylanisolvens This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205155. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933434 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28721_1680015403 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 94.36 completeness software checkM_v1.1 contamination score 0.81 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205155 of study SRP200540. sample derived from SAMN11949719 sample name MGG28721_1680015403 scientific_name Bacteroides xylanisolvens sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934035 SAMEA112933435 165186 uncultured Ruminococcus sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205155. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933435 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28722_1680015348 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 97.32 completeness software checkM_v1.1 contamination score 0.67 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205155 of study SRP200540. sample derived from SAMN11949719 sample name MGG28722_1680015348 scientific_name uncultured Ruminococcus sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934036 SAMEA112933436 165185 uncultured Eubacterium sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205155. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933436 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28723_1680015401 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 95.3 completeness software checkM_v1.1 contamination score 0.67 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205155 of study SRP200540. sample derived from SAMN11949719 sample name MGG28723_1680015401 scientific_name uncultured Eubacterium sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934037 SAMEA112933437 77133 uncultured bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205155. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933437 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28724_1680015344 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 74.56 completeness software checkM_v1.1 contamination score 0.34 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205155 of study SRP200540. sample derived from SAMN11949719 sample name MGG28724_1680015344 scientific_name uncultured bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934038 SAMEA112933438 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205155. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933438 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28725_1680015352 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 85.23 completeness software checkM_v1.1 contamination score 4.59 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205155 of study SRP200540. sample derived from SAMN11949719 sample name MGG28725_1680015352 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934039 SAMEA112933439 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205155. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933439 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28726_1680015367 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 94.55 completeness software checkM_v1.1 contamination score 3.46 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205155 of study SRP200540. sample derived from SAMN11949719 sample name MGG28726_1680015367 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934040 SAMEA112933440 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205155. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933440 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28727_1680015349 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 96.44 completeness software checkM_v1.1 contamination score 2.3 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205155 of study SRP200540. sample derived from SAMN11949719 sample name MGG28727_1680015349 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934041 SAMEA112933441 512314 uncultured Roseburia sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205155. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933441 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28728_1680015384 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 97.1 completeness software checkM_v1.1 contamination score 1.04 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205155 of study SRP200540. sample derived from SAMN11949719 sample name MGG28728_1680015384 scientific_name uncultured Roseburia sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934042 SAMEA112933442 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205155. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933442 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:09Z INSDC last update 2023-04-23T00:20:09Z INSDC status public Submitter Id MGG28729_1680015343 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 98.1 completeness software checkM_v1.1 contamination score 0.63 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205155 of study SRP200540. sample derived from SAMN11949719 sample name MGG28729_1680015343 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934043 SAMEA112933443 1545742 uncultured Christensenella sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205155. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933443 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:09Z INSDC last update 2023-04-23T00:20:09Z INSDC status public Submitter Id MGG28730_1680015430 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 62.9 completeness software checkM_v1.1 contamination score 0.03 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205155 of study SRP200540. sample derived from SAMN11949719 sample name MGG28730_1680015430 scientific_name uncultured Christensenella sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934044 SAMEA112933444 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205155. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933444 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:09Z INSDC last update 2023-04-23T00:20:09Z INSDC status public Submitter Id MGG28731_1680015430 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 88.61 completeness software checkM_v1.1 contamination score 1.27 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205155 of study SRP200540. sample derived from SAMN11949719 sample name MGG28731_1680015430 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934045 SAMEA112933445 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205155. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933445 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:09Z INSDC last update 2023-04-23T00:20:09Z INSDC status public Submitter Id MGG28732_1680015410 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 54.59 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205155 of study SRP200540. sample derived from SAMN11949719 sample name MGG28732_1680015410 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934046 SAMEA112933446 328812 Parabacteroides goldsteinii This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205155. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933446 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:09Z INSDC last update 2023-04-23T00:20:09Z INSDC status public Submitter Id MGG28733_1680015345 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 91.65 completeness software checkM_v1.1 contamination score 2.28 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205155 of study SRP200540. sample derived from SAMN11949719 sample name MGG28733_1680015345 scientific_name Parabacteroides goldsteinii sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934047 SAMEA112933447 1545742 uncultured Christensenella sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205155. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933447 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:09Z INSDC last update 2023-04-23T00:20:09Z INSDC status public Submitter Id MGG28734_1680015366 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 87.5 completeness software checkM_v1.1 contamination score 1.64 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205155 of study SRP200540. sample derived from SAMN11949719 sample name MGG28734_1680015366 scientific_name uncultured Christensenella sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934048 SAMEA112933448 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205155. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933448 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:09Z INSDC last update 2023-04-23T00:20:09Z INSDC status public Submitter Id MGG28735_1680015361 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 95.81 completeness software checkM_v1.1 contamination score 4.71 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205155 of study SRP200540. sample derived from SAMN11949719 sample name MGG28735_1680015361 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934049 SAMEA112933449 2163171 uncultured Kineothrix sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205155. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933449 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28736_1680015355 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 87.88 completeness software checkM_v1.1 contamination score 2.01 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205155 of study SRP200540. sample derived from SAMN11949719 sample name MGG28736_1680015355 scientific_name uncultured Kineothrix sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934050 SAMEA112933450 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205155. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933450 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28737_1680015351 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 91.98 completeness software checkM_v1.1 contamination score 4.36 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205155 of study SRP200540. sample derived from SAMN11949719 sample name MGG28737_1680015351 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934051 SAMEA112933451 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205155. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933451 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28738_1680015395 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 78.38 completeness software checkM_v1.1 contamination score 2.76 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205155 of study SRP200540. sample derived from SAMN11949719 sample name MGG28738_1680015395 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934052 SAMEA112933452 248039 Mucispirillum schaedleri This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205155. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933452 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28739_1680015361 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 89.64 completeness software checkM_v1.1 contamination score 3.02 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205155 of study SRP200540. sample derived from SAMN11949719 sample name MGG28739_1680015361 scientific_name Mucispirillum schaedleri sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934053 SAMEA112933453 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205155. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933453 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28740_1680015368 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 89.96 completeness software checkM_v1.1 contamination score 1.99 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205155 of study SRP200540. sample derived from SAMN11949719 sample name MGG28740_1680015368 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934054 SAMEA112933454 1671927 uncultured Acetatifactor sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205155. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933454 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28741_1680015404 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 73.49 completeness software checkM_v1.1 contamination score 2.86 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205155 of study SRP200540. sample derived from SAMN11949719 sample name MGG28741_1680015404 scientific_name uncultured Acetatifactor sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934055 SAMEA112933455 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205155. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933455 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28742_1680015390 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 81.16 completeness software checkM_v1.1 contamination score 2.79 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205155 of study SRP200540. sample derived from SAMN11949719 sample name MGG28742_1680015390 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934056 SAMEA112933456 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205155. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933456 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28743_1680015390 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-14 completeness score 68.66 completeness software checkM_v1.1 contamination score 0.95 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205155 of study SRP200540. sample derived from SAMN11949719 sample name MGG28743_1680015390 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934057 SAMEA112933457 1598 Limosilactobacillus reuteri This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205156. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933457 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28744_1680015424 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 96.72 completeness software checkM_v1.1 contamination score 0.82 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205156 of study SRP200540. sample derived from SAMN11949741 sample name MGG28744_1680015424 scientific_name Limosilactobacillus reuteri sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934058 SAMEA112933458 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205156. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933458 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28747_1680015337 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 97.65 completeness software checkM_v1.1 contamination score 1.34 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205156 of study SRP200540. sample derived from SAMN11949741 sample name MGG28747_1680015337 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934059 SAMEA112933459 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205156. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933459 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28749_1680015344 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 97.97 completeness software checkM_v1.1 contamination score 2.03 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205156 of study SRP200540. sample derived from SAMN11949741 sample name MGG28749_1680015344 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934060 SAMEA112933460 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205156. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933460 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28750_1680015437 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 86.98 completeness software checkM_v1.1 contamination score 0.94 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205156 of study SRP200540. sample derived from SAMN11949741 sample name MGG28750_1680015437 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934061 SAMEA112933461 76936 Helicobacter typhlonius This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205156. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933461 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28751_1680015353 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 98.82 completeness software checkM_v1.1 contamination score 1.18 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205156 of study SRP200540. sample derived from SAMN11949741 sample name MGG28751_1680015353 scientific_name Helicobacter typhlonius sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934062 SAMEA112933462 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205156. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933462 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28752_1680015434 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 97.7 completeness software checkM_v1.1 contamination score 1.15 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205156 of study SRP200540. sample derived from SAMN11949741 sample name MGG28752_1680015434 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934063 SAMEA112933463 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205156. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933463 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28753_1680015359 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 59.73 completeness software checkM_v1.1 contamination score 0.75 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205156 of study SRP200540. sample derived from SAMN11949741 sample name MGG28753_1680015359 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934064 SAMEA112933464 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205156. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933464 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28754_1680015349 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 96.2 completeness software checkM_v1.1 contamination score 0.95 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205156 of study SRP200540. sample derived from SAMN11949741 sample name MGG28754_1680015349 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934065 SAMEA112933465 538949 uncultured Alistipes sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205156. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933465 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28756_1680015359 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 95.95 completeness software checkM_v1.1 contamination score 1.7 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205156 of study SRP200540. sample derived from SAMN11949741 sample name MGG28756_1680015359 scientific_name uncultured Alistipes sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934066 SAMEA112933466 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205156. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933466 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28757_1680015416 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 92.99 completeness software checkM_v1.1 contamination score 1.72 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205156 of study SRP200540. sample derived from SAMN11949741 sample name MGG28757_1680015416 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934067 SAMEA112933467 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205156. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933467 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28758_1680015415 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 97.01 completeness software checkM_v1.1 contamination score 2.59 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205156 of study SRP200540. sample derived from SAMN11949741 sample name MGG28758_1680015415 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934068 SAMEA112933468 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205156. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933468 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28759_1680015389 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 89.24 completeness software checkM_v1.1 contamination score 1.27 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205156 of study SRP200540. sample derived from SAMN11949741 sample name MGG28759_1680015389 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934069 SAMEA112933469 348578 uncultured Porphyromonadaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205156. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933469 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28760_1680015396 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 67.04 completeness software checkM_v1.1 contamination score 0.38 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205156 of study SRP200540. sample derived from SAMN11949741 sample name MGG28760_1680015396 scientific_name uncultured Porphyromonadaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934070 SAMEA112933470 348578 uncultured Porphyromonadaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205156. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933470 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28761_1680015379 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 97.92 completeness software checkM_v1.1 contamination score 0.38 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205156 of study SRP200540. sample derived from SAMN11949741 sample name MGG28761_1680015379 scientific_name uncultured Porphyromonadaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934071 SAMEA112933471 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205156. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933471 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28762_1680015362 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 85.63 completeness software checkM_v1.1 contamination score 1.92 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205156 of study SRP200540. sample derived from SAMN11949741 sample name MGG28762_1680015362 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934072 SAMEA112933472 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205156. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933472 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28765_1680015397 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 93.38 completeness software checkM_v1.1 contamination score 3.07 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205156 of study SRP200540. sample derived from SAMN11949741 sample name MGG28765_1680015397 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934073 SAMEA112933473 1796646 Muribaculum intestinale This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205156. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933473 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28766_1680015370 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 86.04 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205156 of study SRP200540. sample derived from SAMN11949741 sample name MGG28766_1680015370 scientific_name Muribaculum intestinale sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934074 SAMEA112933474 1981031 uncultured Mailhella sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205156. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933474 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28767_1680015436 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 93.49 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205156 of study SRP200540. sample derived from SAMN11949741 sample name MGG28767_1680015436 scientific_name uncultured Mailhella sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934075 SAMEA112933475 512312 uncultured Parabacteroides sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205156. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933475 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28768_1680015430 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 87.91 completeness software checkM_v1.1 contamination score 2.31 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205156 of study SRP200540. sample derived from SAMN11949741 sample name MGG28768_1680015430 scientific_name uncultured Parabacteroides sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934076 SAMEA112933476 60246 Helicobacter ganmani This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205156. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933476 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28769_1680015384 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 99.12 completeness software checkM_v1.1 contamination score 1.18 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205156 of study SRP200540. sample derived from SAMN11949741 sample name MGG28769_1680015384 scientific_name Helicobacter ganmani sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934077 SAMEA112933477 1751881 uncultured Hungatella sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205156. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933477 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28770_1680015433 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 93.14 completeness software checkM_v1.1 contamination score 0.79 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205156 of study SRP200540. sample derived from SAMN11949741 sample name MGG28770_1680015433 scientific_name uncultured Hungatella sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934078 SAMEA112933478 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205156. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933478 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28771_1680015430 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 95.15 completeness software checkM_v1.1 contamination score 2.59 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205156 of study SRP200540. sample derived from SAMN11949741 sample name MGG28771_1680015430 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934079 SAMEA112933479 1671927 uncultured Acetatifactor sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205156. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933479 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28772_1680015419 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 94.4 completeness software checkM_v1.1 contamination score 4.9 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205156 of study SRP200540. sample derived from SAMN11949741 sample name MGG28772_1680015419 scientific_name uncultured Acetatifactor sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934080 SAMEA112933480 165185 uncultured Eubacterium sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205156. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933480 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28773_1680015432 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 88.97 completeness software checkM_v1.1 contamination score 2.3 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205156 of study SRP200540. sample derived from SAMN11949741 sample name MGG28773_1680015432 scientific_name uncultured Eubacterium sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934081 SAMEA112933481 165185 uncultured Eubacterium sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205156. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933481 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28774_1680015393 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 95.53 completeness software checkM_v1.1 contamination score 1.9 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205156 of study SRP200540. sample derived from SAMN11949741 sample name MGG28774_1680015393 scientific_name uncultured Eubacterium sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934082 SAMEA112933482 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205156. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933482 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28775_1680015421 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 76.67 completeness software checkM_v1.1 contamination score 1.72 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205156 of study SRP200540. sample derived from SAMN11949741 sample name MGG28775_1680015421 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934083 SAMEA112933483 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205156. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933483 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28777_1680015437 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 92.49 completeness software checkM_v1.1 contamination score 0.38 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205156 of study SRP200540. sample derived from SAMN11949741 sample name MGG28777_1680015437 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934084 SAMEA112933484 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205156. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933484 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28778_1680015372 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 90.73 completeness software checkM_v1.1 contamination score 2.68 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205156 of study SRP200540. sample derived from SAMN11949741 sample name MGG28778_1680015372 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934085 SAMEA112933485 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205156. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933485 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28779_1680015392 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 82.76 completeness software checkM_v1.1 contamination score 4.69 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205156 of study SRP200540. sample derived from SAMN11949741 sample name MGG28779_1680015392 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934086 SAMEA112933486 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205156. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933486 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28781_1680015425 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 70.28 completeness software checkM_v1.1 contamination score 2.94 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205156 of study SRP200540. sample derived from SAMN11949741 sample name MGG28781_1680015425 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934087 SAMEA112933487 76936 Helicobacter typhlonius This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205157. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933487 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28782_1680015396 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 99.35 completeness software checkM_v1.1 contamination score 1.06 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205157 of study SRP200540. sample derived from SAMN11955117 sample name MGG28782_1680015396 scientific_name Helicobacter typhlonius sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934088 SAMEA112933488 329911 uncultured Peptococcaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205157. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933488 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28783_1680015341 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 76.81 completeness software checkM_v1.1 contamination score 1.62 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205157 of study SRP200540. sample derived from SAMN11955117 sample name MGG28783_1680015341 scientific_name uncultured Peptococcaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934089 SAMEA112933489 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205157. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933489 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28784_1680015352 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 77.61 completeness software checkM_v1.1 contamination score 4.79 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205157 of study SRP200540. sample derived from SAMN11955117 sample name MGG28784_1680015352 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934090 SAMEA112933490 538949 uncultured Alistipes sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205157. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933490 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28785_1680015352 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 99.04 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205157 of study SRP200540. sample derived from SAMN11955117 sample name MGG28785_1680015352 scientific_name uncultured Alistipes sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934091 SAMEA112933491 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205157. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933491 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28786_1680015403 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 87.73 completeness software checkM_v1.1 contamination score 1.21 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205157 of study SRP200540. sample derived from SAMN11955117 sample name MGG28786_1680015403 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934092 SAMEA112933492 1981031 uncultured Mailhella sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205157. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933492 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28788_1680015375 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 98.22 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205157 of study SRP200540. sample derived from SAMN11955117 sample name MGG28788_1680015375 scientific_name uncultured Mailhella sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934093 SAMEA112933493 1622 Ligilactobacillus murinus This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205157. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933493 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28790_1680015349 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 99.48 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205157 of study SRP200540. sample derived from SAMN11955117 sample name MGG28790_1680015349 scientific_name Ligilactobacillus murinus sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934094 SAMEA112933494 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205157. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933494 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28791_1680015355 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 97.65 completeness software checkM_v1.1 contamination score 1.34 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205157 of study SRP200540. sample derived from SAMN11955117 sample name MGG28791_1680015355 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934095 SAMEA112933495 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205157. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933495 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28792_1680015419 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 90.06 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205157 of study SRP200540. sample derived from SAMN11955117 sample name MGG28792_1680015419 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934096 SAMEA112933496 286138 uncultured Dorea sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205157. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933496 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28793_1680015337 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 87.13 completeness software checkM_v1.1 contamination score 1.27 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205157 of study SRP200540. sample derived from SAMN11955117 sample name MGG28793_1680015337 scientific_name uncultured Dorea sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934097 SAMEA112933497 194843 uncultured Bacteroidales bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205157. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933497 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28794_1680015427 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 97.31 completeness software checkM_v1.1 contamination score 0.54 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205157 of study SRP200540. sample derived from SAMN11955117 sample name MGG28794_1680015427 scientific_name uncultured Bacteroidales bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934098 SAMEA112933498 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205157. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933498 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28795_1680015399 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 67.61 completeness software checkM_v1.1 contamination score 0.57 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205157 of study SRP200540. sample derived from SAMN11955117 sample name MGG28795_1680015399 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934099 SAMEA112933499 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205157. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933499 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28796_1680015365 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 86.08 completeness software checkM_v1.1 contamination score 0.63 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205157 of study SRP200540. sample derived from SAMN11955117 sample name MGG28796_1680015365 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934100 SAMEA112933500 165185 uncultured Eubacterium sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205157. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933500 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28797_1680015412 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 78.86 completeness software checkM_v1.1 contamination score 0.67 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205157 of study SRP200540. sample derived from SAMN11955117 sample name MGG28797_1680015412 scientific_name uncultured Eubacterium sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934101 SAMEA112933501 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205157. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933501 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28798_1680015412 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 80.44 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205157 of study SRP200540. sample derived from SAMN11955117 sample name MGG28798_1680015412 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934102 SAMEA112933502 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205157. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933502 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28800_1680015387 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 90.75 completeness software checkM_v1.1 contamination score 0.75 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205157 of study SRP200540. sample derived from SAMN11955117 sample name MGG28800_1680015387 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934103 SAMEA112933503 194843 uncultured Bacteroidales bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205157. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933503 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28801_1680015356 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 96.9 completeness software checkM_v1.1 contamination score 0.95 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205157 of study SRP200540. sample derived from SAMN11955117 sample name MGG28801_1680015356 scientific_name uncultured Bacteroidales bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934104 SAMEA112933504 77133 uncultured bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205157. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933504 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28802_1680015434 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 89.66 completeness software checkM_v1.1 contamination score 2.86 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205157 of study SRP200540. sample derived from SAMN11955117 sample name MGG28802_1680015434 scientific_name uncultured bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934105 SAMEA112933505 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205157. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933505 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28803_1680015385 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 86.15 completeness software checkM_v1.1 contamination score 0.58 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205157 of study SRP200540. sample derived from SAMN11955117 sample name MGG28803_1680015385 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934106 SAMEA112933506 33959 Lactobacillus johnsonii This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205157. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933506 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28804_1680015409 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 69.51 completeness software checkM_v1.1 contamination score 1.1 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205157 of study SRP200540. sample derived from SAMN11955117 sample name MGG28804_1680015409 scientific_name Lactobacillus johnsonii sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934107 SAMEA112933507 286138 uncultured Dorea sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205157. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933507 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28805_1680015393 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 72.47 completeness software checkM_v1.1 contamination score 2.87 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205157 of study SRP200540. sample derived from SAMN11955117 sample name MGG28805_1680015393 scientific_name uncultured Dorea sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934108 SAMEA112933508 286138 uncultured Dorea sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205157. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933508 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28806_1680015420 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 93.62 completeness software checkM_v1.1 contamination score 4.39 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205157 of study SRP200540. sample derived from SAMN11955117 sample name MGG28806_1680015420 scientific_name uncultured Dorea sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934109 SAMEA112933509 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205157. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933509 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28807_1680015419 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 85.44 completeness software checkM_v1.1 contamination score 1.9 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205157 of study SRP200540. sample derived from SAMN11955117 sample name MGG28807_1680015419 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934110 SAMEA112933510 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205157. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933510 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28808_1680015425 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 82.89 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205157 of study SRP200540. sample derived from SAMN11955117 sample name MGG28808_1680015425 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934111 SAMEA112933511 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205157. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933511 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28810_1680015392 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 96.04 completeness software checkM_v1.1 contamination score 0.38 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205157 of study SRP200540. sample derived from SAMN11955117 sample name MGG28810_1680015392 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934112 SAMEA112933512 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205157. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933512 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28811_1680015359 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 97.82 completeness software checkM_v1.1 contamination score 0.67 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205157 of study SRP200540. sample derived from SAMN11955117 sample name MGG28811_1680015359 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934113 SAMEA112933513 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205157. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933513 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28812_1680015340 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 80.08 completeness software checkM_v1.1 contamination score 1.18 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205157 of study SRP200540. sample derived from SAMN11955117 sample name MGG28812_1680015340 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934114 SAMEA112933514 1598 Limosilactobacillus reuteri This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205157. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933514 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28813_1680015424 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 97.83 completeness software checkM_v1.1 contamination score 0.54 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205157 of study SRP200540. sample derived from SAMN11955117 sample name MGG28813_1680015424 scientific_name Limosilactobacillus reuteri sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934115 SAMEA112933515 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205157. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933515 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28814_1680015378 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 92.62 completeness software checkM_v1.1 contamination score 0.67 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205157 of study SRP200540. sample derived from SAMN11955117 sample name MGG28814_1680015378 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934116 SAMEA112933516 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205157. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933516 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28815_1680015360 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 81.26 completeness software checkM_v1.1 contamination score 1.52 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205157 of study SRP200540. sample derived from SAMN11955117 sample name MGG28815_1680015360 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934117 SAMEA112933517 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205157. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933517 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28816_1680015425 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 89.69 completeness software checkM_v1.1 contamination score 4.29 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205157 of study SRP200540. sample derived from SAMN11955117 sample name MGG28816_1680015425 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934118 SAMEA112933518 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205157. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933518 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28817_1680015360 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 95.64 completeness software checkM_v1.1 contamination score 0.84 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205157 of study SRP200540. sample derived from SAMN11955117 sample name MGG28817_1680015360 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934119 SAMEA112933519 244328 uncultured Clostridia bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205157. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933519 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:09Z INSDC last update 2023-04-23T00:20:09Z INSDC status public Submitter Id MGG28818_1680015353 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 94.97 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205157 of study SRP200540. sample derived from SAMN11955117 sample name MGG28818_1680015353 scientific_name uncultured Clostridia bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934120 SAMEA112933520 368003 uncultured Rikenella sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205157. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933520 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:09Z INSDC last update 2023-04-23T00:20:09Z INSDC status public Submitter Id MGG28819_1680015364 assembly quality Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 94.98 completeness software checkM_v1.1 contamination score 0.48 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205157 of study SRP200540. sample derived from SAMN11955117 sample name MGG28819_1680015364 scientific_name uncultured Rikenella sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934121 SAMEA112933521 1671927 uncultured Acetatifactor sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205157. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933521 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:09Z INSDC last update 2023-04-23T00:20:09Z INSDC status public Submitter Id MGG28820_1680015347 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 81.19 completeness software checkM_v1.1 contamination score 2.27 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205157 of study SRP200540. sample derived from SAMN11955117 sample name MGG28820_1680015347 scientific_name uncultured Acetatifactor sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934122 SAMEA112933522 2163171 uncultured Kineothrix sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205157. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933522 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:09Z INSDC last update 2023-04-23T00:20:09Z INSDC status public Submitter Id MGG28821_1680015349 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 86.02 completeness software checkM_v1.1 contamination score 3.85 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205157 of study SRP200540. sample derived from SAMN11955117 sample name MGG28821_1680015349 scientific_name uncultured Kineothrix sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934123 SAMEA112933523 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205157. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933523 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:09Z INSDC last update 2023-04-23T00:20:09Z INSDC status public Submitter Id MGG28823_1680015420 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 72.41 completeness software checkM_v1.1 contamination score 4.09 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205157 of study SRP200540. sample derived from SAMN11955117 sample name MGG28823_1680015420 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934124 SAMEA112933524 2321402 uncultured Eggerthellaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205157. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933524 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:09Z INSDC last update 2023-04-23T00:20:09Z INSDC status public Submitter Id MGG28824_1680015422 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 82.36 completeness software checkM_v1.1 contamination score 2.91 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205157 of study SRP200540. sample derived from SAMN11955117 sample name MGG28824_1680015422 scientific_name uncultured Eggerthellaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934125 SAMEA112933525 172733 uncultured Eubacteriales bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205157. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933525 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:09Z INSDC last update 2023-04-23T00:20:09Z INSDC status public Submitter Id MGG28825_1680015399 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 72.54 completeness software checkM_v1.1 contamination score 1.45 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205157 of study SRP200540. sample derived from SAMN11955117 sample name MGG28825_1680015399 scientific_name uncultured Eubacteriales bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934126 SAMEA112933526 165186 uncultured Ruminococcus sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205158. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933526 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28827_1680015433 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 97.99 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205158 of study SRP200540. sample derived from SAMN11949735 sample name MGG28827_1680015433 scientific_name uncultured Ruminococcus sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934127 SAMEA112933527 348578 uncultured Porphyromonadaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205158. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933527 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28828_1680015355 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 75.07 completeness software checkM_v1.1 contamination score 0.4 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205158 of study SRP200540. sample derived from SAMN11949735 sample name MGG28828_1680015355 scientific_name uncultured Porphyromonadaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934128 SAMEA112933528 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205158. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933528 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28829_1680015396 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 97.65 completeness software checkM_v1.1 contamination score 1.34 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205158 of study SRP200540. sample derived from SAMN11949735 sample name MGG28829_1680015396 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934129 SAMEA112933529 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205158. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933529 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28832_1680015338 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 98.85 completeness software checkM_v1.1 contamination score 1.15 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205158 of study SRP200540. sample derived from SAMN11949735 sample name MGG28832_1680015338 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934130 SAMEA112933530 286138 uncultured Dorea sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205158. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933530 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28833_1680015413 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 74.46 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205158 of study SRP200540. sample derived from SAMN11949735 sample name MGG28833_1680015413 scientific_name uncultured Dorea sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934131 SAMEA112933531 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205158. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933531 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28834_1680015403 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 93.77 completeness software checkM_v1.1 contamination score 0.94 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205158 of study SRP200540. sample derived from SAMN11949735 sample name MGG28834_1680015403 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934132 SAMEA112933532 162156 uncultured Bacteroides sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205158. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933532 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28836_1680015412 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 79.0 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205158 of study SRP200540. sample derived from SAMN11949735 sample name MGG28836_1680015412 scientific_name uncultured Bacteroides sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934133 SAMEA112933533 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205158. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933533 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28837_1680015375 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 93.65 completeness software checkM_v1.1 contamination score 4.02 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205158 of study SRP200540. sample derived from SAMN11949735 sample name MGG28837_1680015375 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934134 SAMEA112933534 85831 Bacteroides acidifaciens This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205158. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933534 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28838_1680015383 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 56.9 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205158 of study SRP200540. sample derived from SAMN11949735 sample name MGG28838_1680015383 scientific_name Bacteroides acidifaciens sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934135 SAMEA112933535 224209 uncultured Bacilli bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205158. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933535 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28839_1680015372 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 89.89 completeness software checkM_v1.1 contamination score 3.75 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205158 of study SRP200540. sample derived from SAMN11949735 sample name MGG28839_1680015372 scientific_name uncultured Bacilli bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934136 SAMEA112933536 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205158. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933536 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28840_1680015371 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 89.08 completeness software checkM_v1.1 contamination score 2.3 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205158 of study SRP200540. sample derived from SAMN11949735 sample name MGG28840_1680015371 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934137 SAMEA112933537 244328 uncultured Clostridia bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205158. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933537 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28841_1680015363 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 95.86 completeness software checkM_v1.1 contamination score 0.67 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205158 of study SRP200540. sample derived from SAMN11949735 sample name MGG28841_1680015363 scientific_name uncultured Clostridia bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934138 SAMEA112933538 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205158. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933538 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28843_1680015383 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 78.59 completeness software checkM_v1.1 contamination score 1.15 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205158 of study SRP200540. sample derived from SAMN11949735 sample name MGG28843_1680015383 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934139 SAMEA112933539 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205158. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933539 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28844_1680015402 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 88.3 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205158 of study SRP200540. sample derived from SAMN11949735 sample name MGG28844_1680015402 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934140 SAMEA112933540 876416 uncultured Odoribacter sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205158. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933540 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28845_1680015350 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 99.1 completeness software checkM_v1.1 contamination score 0.54 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205158 of study SRP200540. sample derived from SAMN11949735 sample name MGG28845_1680015350 scientific_name uncultured Odoribacter sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934141 SAMEA112933541 1671927 uncultured Acetatifactor sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205158. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933541 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28847_1680015354 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 91.84 completeness software checkM_v1.1 contamination score 4.33 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205158 of study SRP200540. sample derived from SAMN11949735 sample name MGG28847_1680015354 scientific_name uncultured Acetatifactor sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934142 SAMEA112933542 1598 Limosilactobacillus reuteri This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205158. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933542 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28848_1680015392 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 99.45 completeness software checkM_v1.1 contamination score 0.55 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205158 of study SRP200540. sample derived from SAMN11949735 sample name MGG28848_1680015392 scientific_name Limosilactobacillus reuteri sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934143 SAMEA112933543 33959 Lactobacillus johnsonii This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205158. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933543 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28849_1680015414 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 89.42 completeness software checkM_v1.1 contamination score 4.79 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205158 of study SRP200540. sample derived from SAMN11949735 sample name MGG28849_1680015414 scientific_name Lactobacillus johnsonii sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934144 SAMEA112933544 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205158. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933544 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28850_1680015415 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 62.93 completeness software checkM_v1.1 contamination score 1.72 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205158 of study SRP200540. sample derived from SAMN11949735 sample name MGG28850_1680015415 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934145 SAMEA112933545 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205158. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933545 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28851_1680015411 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 69.43 completeness software checkM_v1.1 contamination score 3.52 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205158 of study SRP200540. sample derived from SAMN11949735 sample name MGG28851_1680015411 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934146 SAMEA112933546 876091 uncultured Oscillibacter sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205158. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933546 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28852_1680015358 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 75.67 completeness software checkM_v1.1 contamination score 3.64 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205158 of study SRP200540. sample derived from SAMN11949735 sample name MGG28852_1680015358 scientific_name uncultured Oscillibacter sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934147 SAMEA112933547 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205159. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933547 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28854_1680015417 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 88.85 completeness software checkM_v1.1 contamination score 3.69 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205159 of study SRP200540. sample derived from SAMN11949736 sample name MGG28854_1680015417 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934148 SAMEA112933548 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205159. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933548 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28855_1680015434 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 96.35 completeness software checkM_v1.1 contamination score 0.92 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205159 of study SRP200540. sample derived from SAMN11949736 sample name MGG28855_1680015434 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934149 SAMEA112933549 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205159. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933549 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28857_1680015419 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 98.16 completeness software checkM_v1.1 contamination score 3.74 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205159 of study SRP200540. sample derived from SAMN11949736 sample name MGG28857_1680015419 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934150 SAMEA112933550 76936 Helicobacter typhlonius This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205159. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933550 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28858_1680015382 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 99.35 completeness software checkM_v1.1 contamination score 1.06 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205159 of study SRP200540. sample derived from SAMN11949736 sample name MGG28858_1680015382 scientific_name Helicobacter typhlonius sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934151 SAMEA112933551 1981031 uncultured Mailhella sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205159. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933551 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28859_1680015337 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 97.63 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205159 of study SRP200540. sample derived from SAMN11949736 sample name MGG28859_1680015337 scientific_name uncultured Mailhella sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934152 SAMEA112933552 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205159. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933552 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28860_1680015390 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 63.07 completeness software checkM_v1.1 contamination score 0.57 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205159 of study SRP200540. sample derived from SAMN11949736 sample name MGG28860_1680015390 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934153 SAMEA112933553 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205159. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933553 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28861_1680015349 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 96.98 completeness software checkM_v1.1 contamination score 1.34 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205159 of study SRP200540. sample derived from SAMN11949736 sample name MGG28861_1680015349 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934154 SAMEA112933554 165186 uncultured Ruminococcus sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205159. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933554 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28862_1680015379 assembly quality Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 97.32 completeness software checkM_v1.1 contamination score 0.17 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205159 of study SRP200540. sample derived from SAMN11949736 sample name MGG28862_1680015379 scientific_name uncultured Ruminococcus sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934155 SAMEA112933555 194843 uncultured Bacteroidales bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205159. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933555 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28863_1680015373 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 77.67 completeness software checkM_v1.1 contamination score 1.79 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205159 of study SRP200540. sample derived from SAMN11949736 sample name MGG28863_1680015373 scientific_name uncultured Bacteroidales bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934156 SAMEA112933556 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205159. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933556 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28864_1680015399 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 83.0 completeness software checkM_v1.1 contamination score 1.57 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205159 of study SRP200540. sample derived from SAMN11949736 sample name MGG28864_1680015399 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934157 SAMEA112933557 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205159. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933557 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28865_1680015347 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 91.51 completeness software checkM_v1.1 contamination score 0.94 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205159 of study SRP200540. sample derived from SAMN11949736 sample name MGG28865_1680015347 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934158 SAMEA112933558 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205159. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933558 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28866_1680015421 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 89.08 completeness software checkM_v1.1 contamination score 0.86 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205159 of study SRP200540. sample derived from SAMN11949736 sample name MGG28866_1680015421 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934159 SAMEA112933559 821 Phocaeicola vulgatus This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205159. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933559 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28867_1680015359 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 67.67 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205159 of study SRP200540. sample derived from SAMN11949736 sample name MGG28867_1680015359 scientific_name Phocaeicola vulgatus sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934160 SAMEA112933560 244328 uncultured Clostridia bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205159. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933560 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28868_1680015432 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 97.87 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205159 of study SRP200540. sample derived from SAMN11949736 sample name MGG28868_1680015432 scientific_name uncultured Clostridia bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934161 SAMEA112933561 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205159. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933561 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28870_1680015345 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 94.25 completeness software checkM_v1.1 contamination score 2.08 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205159 of study SRP200540. sample derived from SAMN11949736 sample name MGG28870_1680015345 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934162 SAMEA112933562 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205159. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933562 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28873_1680015365 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 57.58 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205159 of study SRP200540. sample derived from SAMN11949736 sample name MGG28873_1680015365 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934163 SAMEA112933563 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205159. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933563 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28874_1680015350 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 70.94 completeness software checkM_v1.1 contamination score 0.75 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205159 of study SRP200540. sample derived from SAMN11949736 sample name MGG28874_1680015350 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934164 SAMEA112933564 165185 uncultured Eubacterium sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205159. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933564 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28875_1680015362 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 51.72 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205159 of study SRP200540. sample derived from SAMN11949736 sample name MGG28875_1680015362 scientific_name uncultured Eubacterium sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934165 SAMEA112933565 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205159. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933565 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28876_1680015393 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 96.98 completeness software checkM_v1.1 contamination score 1.51 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205159 of study SRP200540. sample derived from SAMN11949736 sample name MGG28876_1680015393 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934166 SAMEA112933566 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205159. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933566 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28877_1680015354 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 50.47 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205159 of study SRP200540. sample derived from SAMN11949736 sample name MGG28877_1680015354 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934167 SAMEA112933567 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205159. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933567 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28878_1680015376 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 97.19 completeness software checkM_v1.1 contamination score 3.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205159 of study SRP200540. sample derived from SAMN11949736 sample name MGG28878_1680015376 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934168 SAMEA112933568 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205159. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933568 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28879_1680015392 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 92.39 completeness software checkM_v1.1 contamination score 3.16 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205159 of study SRP200540. sample derived from SAMN11949736 sample name MGG28879_1680015392 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934169 SAMEA112933569 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205159. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933569 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28880_1680015356 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 93.96 completeness software checkM_v1.1 contamination score 3.47 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205159 of study SRP200540. sample derived from SAMN11949736 sample name MGG28880_1680015356 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934170 SAMEA112933570 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205159. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933570 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28881_1680015348 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 76.73 completeness software checkM_v1.1 contamination score 1.34 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205159 of study SRP200540. sample derived from SAMN11949736 sample name MGG28881_1680015348 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934171 SAMEA112933571 512312 uncultured Parabacteroides sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205159. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933571 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28882_1680015400 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 86.5 completeness software checkM_v1.1 contamination score 0.64 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205159 of study SRP200540. sample derived from SAMN11949736 sample name MGG28882_1680015400 scientific_name uncultured Parabacteroides sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934172 SAMEA112933572 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205159. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933572 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28883_1680015411 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 84.86 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205159 of study SRP200540. sample derived from SAMN11949736 sample name MGG28883_1680015411 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934173 SAMEA112933573 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205159. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933573 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28886_1680015425 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 86.24 completeness software checkM_v1.1 contamination score 2.68 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205159 of study SRP200540. sample derived from SAMN11949736 sample name MGG28886_1680015425 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934174 SAMEA112933574 179883 uncultured Candidatus Saccharibacteria bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205159. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933574 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28887_1680015426 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 65.89 completeness software checkM_v1.1 contamination score 0.32 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205159 of study SRP200540. sample derived from SAMN11949736 sample name MGG28887_1680015426 scientific_name uncultured Candidatus Saccharibacteria bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934175 SAMEA112933575 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205159. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933575 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28888_1680015423 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 72.11 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205159 of study SRP200540. sample derived from SAMN11949736 sample name MGG28888_1680015423 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934176 SAMEA112933576 348578 uncultured Porphyromonadaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205159. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933576 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28889_1680015384 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 82.73 completeness software checkM_v1.1 contamination score 0.75 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205159 of study SRP200540. sample derived from SAMN11949736 sample name MGG28889_1680015384 scientific_name uncultured Porphyromonadaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934177 SAMEA112933577 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205159. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933577 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28890_1680015404 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 84.51 completeness software checkM_v1.1 contamination score 4.36 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205159 of study SRP200540. sample derived from SAMN11949736 sample name MGG28890_1680015404 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934178 SAMEA112933578 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205159. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933578 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28891_1680015427 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 82.33 completeness software checkM_v1.1 contamination score 0.5 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205159 of study SRP200540. sample derived from SAMN11949736 sample name MGG28891_1680015427 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934179 SAMEA112933579 167967 uncultured Mycoplasma sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205159. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933579 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28892_1680015408 assembly quality Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 96.12 completeness software checkM_v1.1 contamination score 0.75 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205159 of study SRP200540. sample derived from SAMN11949736 sample name MGG28892_1680015408 scientific_name uncultured Mycoplasma sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934180 SAMEA112933580 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205159. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933580 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG28893_1680015402 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 91.25 completeness software checkM_v1.1 contamination score 5.19 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205159 of study SRP200540. sample derived from SAMN11949736 sample name MGG28893_1680015402 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934181 SAMEA112933581 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205159. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933581 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28894_1680015342 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 91.28 completeness software checkM_v1.1 contamination score 4.03 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205159 of study SRP200540. sample derived from SAMN11949736 sample name MGG28894_1680015342 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934182 SAMEA112933582 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205159. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933582 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28895_1680015414 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 84.81 completeness software checkM_v1.1 contamination score 5.1 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205159 of study SRP200540. sample derived from SAMN11949736 sample name MGG28895_1680015414 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934183 SAMEA112933583 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205159. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933583 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28896_1680015397 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 96.45 completeness software checkM_v1.1 contamination score 1.58 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205159 of study SRP200540. sample derived from SAMN11949736 sample name MGG28896_1680015397 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934184 SAMEA112933584 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205159. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933584 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG28897_1680015363 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 74.84 completeness software checkM_v1.1 contamination score 0.57 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205159 of study SRP200540. sample derived from SAMN11949736 sample name MGG28897_1680015363 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934185 SAMEA112933585 876416 uncultured Odoribacter sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205159. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933585 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28898_1680015435 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 85.88 completeness software checkM_v1.1 contamination score 3.14 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205159 of study SRP200540. sample derived from SAMN11949736 sample name MGG28898_1680015435 scientific_name uncultured Odoribacter sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934186 SAMEA112933586 1671927 uncultured Acetatifactor sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205159. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933586 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28899_1680015342 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 58.77 completeness software checkM_v1.1 contamination score 1.75 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205159 of study SRP200540. sample derived from SAMN11949736 sample name MGG28899_1680015342 scientific_name uncultured Acetatifactor sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934187 SAMEA112933587 194843 uncultured Bacteroidales bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205159. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933587 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG28900_1680015344 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 54.11 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205159 of study SRP200540. sample derived from SAMN11949736 sample name MGG28900_1680015344 scientific_name uncultured Bacteroidales bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934188 SAMEA112933588 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205160. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933588 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28901_1680015402 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 97.65 completeness software checkM_v1.1 contamination score 1.34 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205160 of study SRP200540. sample derived from SAMN11949733 sample name MGG28901_1680015402 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934189 SAMEA112933589 1229255 uncultured Christensenellaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205160. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933589 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28903_1680015432 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 88.97 completeness software checkM_v1.1 contamination score 5.87 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205160 of study SRP200540. sample derived from SAMN11949733 sample name MGG28903_1680015432 scientific_name uncultured Christensenellaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934190 SAMEA112933590 85831 Bacteroides acidifaciens This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205160. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933590 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28904_1680015371 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 60.59 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205160 of study SRP200540. sample derived from SAMN11949733 sample name MGG28904_1680015371 scientific_name Bacteroides acidifaciens sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934191 SAMEA112933591 244328 uncultured Clostridia bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205160. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933591 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28905_1680015391 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 95.19 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205160 of study SRP200540. sample derived from SAMN11949733 sample name MGG28905_1680015391 scientific_name uncultured Clostridia bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934192 SAMEA112933592 60246 Helicobacter ganmani This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205160. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933592 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG28906_1680015437 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 99.12 completeness software checkM_v1.1 contamination score 0.35 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205160 of study SRP200540. sample derived from SAMN11949733 sample name MGG28906_1680015437 scientific_name Helicobacter ganmani sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934193 SAMEA112933593 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205160. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933593 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28907_1680015435 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 98.85 completeness software checkM_v1.1 contamination score 1.15 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205160 of study SRP200540. sample derived from SAMN11949733 sample name MGG28907_1680015435 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934194 SAMEA112933594 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205160. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933594 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28908_1680015418 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 96.26 completeness software checkM_v1.1 contamination score 1.15 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205160 of study SRP200540. sample derived from SAMN11949733 sample name MGG28908_1680015418 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934195 SAMEA112933595 165185 uncultured Eubacterium sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205160. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933595 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28909_1680015387 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 94.52 completeness software checkM_v1.1 contamination score 0.67 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205160 of study SRP200540. sample derived from SAMN11949733 sample name MGG28909_1680015387 scientific_name uncultured Eubacterium sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934196 SAMEA112933596 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205160. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933596 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28911_1680015421 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 97.41 completeness software checkM_v1.1 contamination score 3.74 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205160 of study SRP200540. sample derived from SAMN11949733 sample name MGG28911_1680015421 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934197 SAMEA112933597 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205160. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933597 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28912_1680015398 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 92.13 completeness software checkM_v1.1 contamination score 1.17 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205160 of study SRP200540. sample derived from SAMN11949733 sample name MGG28912_1680015398 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934198 SAMEA112933598 1981031 uncultured Mailhella sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205160. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933598 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28913_1680015392 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 97.63 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205160 of study SRP200540. sample derived from SAMN11949733 sample name MGG28913_1680015392 scientific_name uncultured Mailhella sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934199 SAMEA112933599 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205160. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933599 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28914_1680015337 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 93.99 completeness software checkM_v1.1 contamination score 0.47 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205160 of study SRP200540. sample derived from SAMN11949733 sample name MGG28914_1680015337 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934200 SAMEA112933600 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205160. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933600 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28915_1680015405 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 98.73 completeness software checkM_v1.1 contamination score 5.7 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205160 of study SRP200540. sample derived from SAMN11949733 sample name MGG28915_1680015405 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934201 SAMEA112933601 172733 uncultured Eubacteriales bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205160. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933601 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28916_1680015419 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 93.22 completeness software checkM_v1.1 contamination score 0.45 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205160 of study SRP200540. sample derived from SAMN11949733 sample name MGG28916_1680015419 scientific_name uncultured Eubacteriales bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934202 SAMEA112933602 162156 uncultured Bacteroides sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205160. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933602 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28917_1680015381 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 74.14 completeness software checkM_v1.1 contamination score 3.45 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205160 of study SRP200540. sample derived from SAMN11949733 sample name MGG28917_1680015381 scientific_name uncultured Bacteroides sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934203 SAMEA112933603 76936 Helicobacter typhlonius This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205160. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933603 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:09Z INSDC last update 2023-04-23T00:20:09Z INSDC status public Submitter Id MGG28918_1680015356 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 98.24 completeness software checkM_v1.1 contamination score 1.41 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205160 of study SRP200540. sample derived from SAMN11949733 sample name MGG28918_1680015356 scientific_name Helicobacter typhlonius sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934204 SAMEA112933604 172733 uncultured Eubacteriales bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205160. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933604 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:09Z INSDC last update 2023-04-23T00:20:09Z INSDC status public Submitter Id MGG28919_1680015402 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 91.66 completeness software checkM_v1.1 contamination score 0.16 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205160 of study SRP200540. sample derived from SAMN11949733 sample name MGG28919_1680015402 scientific_name uncultured Eubacteriales bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934205 SAMEA112933605 348578 uncultured Porphyromonadaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205160. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933605 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:09Z INSDC last update 2023-04-23T00:20:09Z INSDC status public Submitter Id MGG28920_1680015387 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 54.16 completeness software checkM_v1.1 contamination score 0.38 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205160 of study SRP200540. sample derived from SAMN11949733 sample name MGG28920_1680015387 scientific_name uncultured Porphyromonadaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934206 SAMEA112933606 1598 Limosilactobacillus reuteri This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205160. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933606 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:09Z INSDC last update 2023-04-23T00:20:09Z INSDC status public Submitter Id MGG28921_1680015369 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 96.45 completeness software checkM_v1.1 contamination score 0.9 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205160 of study SRP200540. sample derived from SAMN11949733 sample name MGG28921_1680015369 scientific_name Limosilactobacillus reuteri sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934207 SAMEA112933607 165185 uncultured Eubacterium sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205160. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933607 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:09Z INSDC last update 2023-04-23T00:20:09Z INSDC status public Submitter Id MGG28922_1680015390 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 83.55 completeness software checkM_v1.1 contamination score 1.72 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205160 of study SRP200540. sample derived from SAMN11949733 sample name MGG28922_1680015390 scientific_name uncultured Eubacterium sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934208 SAMEA112933608 538949 uncultured Alistipes sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205160. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933608 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:09Z INSDC last update 2023-04-23T00:20:09Z INSDC status public Submitter Id MGG28926_1680015360 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 93.47 completeness software checkM_v1.1 contamination score 2.16 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205160 of study SRP200540. sample derived from SAMN11949733 sample name MGG28926_1680015360 scientific_name uncultured Alistipes sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934209 SAMEA112933609 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205160. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933609 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:09Z INSDC last update 2023-04-23T00:20:09Z INSDC status public Submitter Id MGG28927_1680015362 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 83.81 completeness software checkM_v1.1 contamination score 6.06 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205160 of study SRP200540. sample derived from SAMN11949733 sample name MGG28927_1680015362 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934210 SAMEA112933610 33959 Lactobacillus johnsonii This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205160. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933610 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28928_1680015398 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 84.66 completeness software checkM_v1.1 contamination score 2.7 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205160 of study SRP200540. sample derived from SAMN11949733 sample name MGG28928_1680015398 scientific_name Lactobacillus johnsonii sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934211 SAMEA112933611 194843 uncultured Bacteroidales bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205160. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933611 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28929_1680015360 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 59.66 completeness software checkM_v1.1 contamination score 0.86 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205160 of study SRP200540. sample derived from SAMN11949733 sample name MGG28929_1680015360 scientific_name uncultured Bacteroidales bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934212 SAMEA112933612 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205160. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933612 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28930_1680015343 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 75.8 completeness software checkM_v1.1 contamination score 2.85 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205160 of study SRP200540. sample derived from SAMN11949733 sample name MGG28930_1680015343 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934213 SAMEA112933613 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205160. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933613 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28931_1680015359 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 67.22 completeness software checkM_v1.1 contamination score 1.25 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205160 of study SRP200540. sample derived from SAMN11949733 sample name MGG28931_1680015359 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934214 SAMEA112933614 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205161. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933614 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28932_1680015420 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 97.97 completeness software checkM_v1.1 contamination score 0.68 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205161 of study SRP200540. sample derived from SAMN11949734 sample name MGG28932_1680015420 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934215 SAMEA112933615 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205161. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933615 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28933_1680015373 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 76.99 completeness software checkM_v1.1 contamination score 2.01 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205161 of study SRP200540. sample derived from SAMN11949734 sample name MGG28933_1680015373 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934216 SAMEA112933616 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205161. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933616 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28934_1680015411 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 87.36 completeness software checkM_v1.1 contamination score 0.94 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205161 of study SRP200540. sample derived from SAMN11949734 sample name MGG28934_1680015411 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934217 SAMEA112933617 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205161. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933617 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28935_1680015390 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 75.89 completeness software checkM_v1.1 contamination score 1.15 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205161 of study SRP200540. sample derived from SAMN11949734 sample name MGG28935_1680015390 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934218 SAMEA112933618 286138 uncultured Dorea sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205161. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933618 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28937_1680015416 assembly quality Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 95.32 completeness software checkM_v1.1 contamination score 0.58 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205161 of study SRP200540. sample derived from SAMN11949734 sample name MGG28937_1680015416 scientific_name uncultured Dorea sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934219 SAMEA112933619 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205161. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933619 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28939_1680015385 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 97.65 completeness software checkM_v1.1 contamination score 1.34 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205161 of study SRP200540. sample derived from SAMN11949734 sample name MGG28939_1680015385 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934220 SAMEA112933620 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205161. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933620 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28940_1680015410 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 98.16 completeness software checkM_v1.1 contamination score 2.69 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205161 of study SRP200540. sample derived from SAMN11949734 sample name MGG28940_1680015410 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934221 SAMEA112933621 329911 uncultured Peptococcaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205161. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933621 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28941_1680015409 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 80.78 completeness software checkM_v1.1 contamination score 1.62 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205161 of study SRP200540. sample derived from SAMN11949734 sample name MGG28941_1680015409 scientific_name uncultured Peptococcaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934222 SAMEA112933622 165186 uncultured Ruminococcus sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205161. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933622 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28943_1680015437 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 97.32 completeness software checkM_v1.1 contamination score 0.67 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205161 of study SRP200540. sample derived from SAMN11949734 sample name MGG28943_1680015437 scientific_name uncultured Ruminococcus sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934223 SAMEA112933623 76936 Helicobacter typhlonius This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205161. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933623 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28945_1680015372 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 99.35 completeness software checkM_v1.1 contamination score 1.06 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205161 of study SRP200540. sample derived from SAMN11949734 sample name MGG28945_1680015372 scientific_name Helicobacter typhlonius sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934224 SAMEA112933624 85831 Bacteroides acidifaciens This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205161. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933624 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28946_1680015414 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 60.34 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205161 of study SRP200540. sample derived from SAMN11949734 sample name MGG28946_1680015414 scientific_name Bacteroides acidifaciens sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934225 SAMEA112933625 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205161. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933625 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28947_1680015430 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 66.67 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205161 of study SRP200540. sample derived from SAMN11949734 sample name MGG28947_1680015430 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934226 SAMEA112933626 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205161. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933626 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28948_1680015376 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 97.7 completeness software checkM_v1.1 contamination score 0.57 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205161 of study SRP200540. sample derived from SAMN11949734 sample name MGG28948_1680015376 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934227 SAMEA112933627 77133 uncultured bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205161. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933627 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28949_1680015356 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 96.64 completeness software checkM_v1.1 contamination score 1.01 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205161 of study SRP200540. sample derived from SAMN11949734 sample name MGG28949_1680015356 scientific_name uncultured bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934228 SAMEA112933628 165185 uncultured Eubacterium sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205161. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933628 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28951_1680015364 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 97.99 completeness software checkM_v1.1 contamination score 1.34 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205161 of study SRP200540. sample derived from SAMN11949734 sample name MGG28951_1680015364 scientific_name uncultured Eubacterium sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934229 SAMEA112933629 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205161. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933629 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28952_1680015359 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 91.38 completeness software checkM_v1.1 contamination score 0.67 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205161 of study SRP200540. sample derived from SAMN11949734 sample name MGG28952_1680015359 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934230 SAMEA112933630 33959 Lactobacillus johnsonii This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205161. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933630 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG28953_1680015360 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 62.63 completeness software checkM_v1.1 contamination score 0.58 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205161 of study SRP200540. sample derived from SAMN11949734 sample name MGG28953_1680015360 scientific_name Lactobacillus johnsonii sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934231 SAMEA112933631 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205161. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933631 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28954_1680015416 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 80.86 completeness software checkM_v1.1 contamination score 1.7 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205161 of study SRP200540. sample derived from SAMN11949734 sample name MGG28954_1680015416 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934232 SAMEA112933632 151781 Lactobacillus intestinalis This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205161. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933632 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28955_1680015408 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 92.6 completeness software checkM_v1.1 contamination score 2.25 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205161 of study SRP200540. sample derived from SAMN11949734 sample name MGG28955_1680015408 scientific_name Lactobacillus intestinalis sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934233 SAMEA112933633 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205161. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933633 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28956_1680015421 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 75.03 completeness software checkM_v1.1 contamination score 1.14 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205161 of study SRP200540. sample derived from SAMN11949734 sample name MGG28956_1680015421 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934234 SAMEA112933634 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205161. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933634 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28957_1680015422 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 82.72 completeness software checkM_v1.1 contamination score 0.86 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205161 of study SRP200540. sample derived from SAMN11949734 sample name MGG28957_1680015422 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934235 SAMEA112933635 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205161. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933635 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28959_1680015350 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 94.3 completeness software checkM_v1.1 contamination score 0.79 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205161 of study SRP200540. sample derived from SAMN11949734 sample name MGG28959_1680015350 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934236 SAMEA112933636 1598 Limosilactobacillus reuteri This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205161. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933636 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28960_1680015430 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 97.81 completeness software checkM_v1.1 contamination score 1.37 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205161 of study SRP200540. sample derived from SAMN11949734 sample name MGG28960_1680015430 scientific_name Limosilactobacillus reuteri sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934237 SAMEA112933637 172733 uncultured Eubacteriales bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205161. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933637 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28961_1680015376 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 89.26 completeness software checkM_v1.1 contamination score 0.22 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205161 of study SRP200540. sample derived from SAMN11949734 sample name MGG28961_1680015376 scientific_name uncultured Eubacteriales bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934238 SAMEA112933638 194843 uncultured Bacteroidales bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205161. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933638 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28962_1680015382 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 85.79 completeness software checkM_v1.1 contamination score 1.06 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205161 of study SRP200540. sample derived from SAMN11949734 sample name MGG28962_1680015382 scientific_name uncultured Bacteroidales bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934239 SAMEA112933639 348578 uncultured Porphyromonadaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205161. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933639 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28963_1680015383 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 89.49 completeness software checkM_v1.1 contamination score 1.79 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205161 of study SRP200540. sample derived from SAMN11949734 sample name MGG28963_1680015383 scientific_name uncultured Porphyromonadaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934240 SAMEA112933640 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205161. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933640 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG28964_1680015339 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 75.26 completeness software checkM_v1.1 contamination score 0.96 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205161 of study SRP200540. sample derived from SAMN11949734 sample name MGG28964_1680015339 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934241 SAMEA112933641 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205161. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933641 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28965_1680015365 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 77.74 completeness software checkM_v1.1 contamination score 4.68 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205161 of study SRP200540. sample derived from SAMN11949734 sample name MGG28965_1680015365 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934242 SAMEA112933642 244328 uncultured Clostridia bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205161. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933642 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28966_1680015432 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 95.17 completeness software checkM_v1.1 contamination score 0.67 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205161 of study SRP200540. sample derived from SAMN11949734 sample name MGG28966_1680015432 scientific_name uncultured Clostridia bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934243 SAMEA112933643 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205161. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933643 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28967_1680015366 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 66.64 completeness software checkM_v1.1 contamination score 2.16 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205161 of study SRP200540. sample derived from SAMN11949734 sample name MGG28967_1680015366 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934244 SAMEA112933644 194926 uncultured Desulfovibrionaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205161. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933644 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28968_1680015407 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 75.5 completeness software checkM_v1.1 contamination score 1.78 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205161 of study SRP200540. sample derived from SAMN11949734 sample name MGG28968_1680015407 scientific_name uncultured Desulfovibrionaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934245 SAMEA112933645 1751881 uncultured Hungatella sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205161. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933645 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28969_1680015408 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 89.13 completeness software checkM_v1.1 contamination score 1.8 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205161 of study SRP200540. sample derived from SAMN11949734 sample name MGG28969_1680015408 scientific_name uncultured Hungatella sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934246 SAMEA112933646 195049 uncultured Clostridiaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205161. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933646 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28970_1680015339 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 67.02 completeness software checkM_v1.1 contamination score 0.21 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205161 of study SRP200540. sample derived from SAMN11949734 sample name MGG28970_1680015339 scientific_name uncultured Clostridiaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934247 SAMEA112933647 876416 uncultured Odoribacter sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205161. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933647 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28972_1680015391 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 75.0 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205161 of study SRP200540. sample derived from SAMN11949734 sample name MGG28972_1680015391 scientific_name uncultured Odoribacter sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934248 SAMEA112933648 1622 Ligilactobacillus murinus This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205162. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933648 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28974_1680015398 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 94.22 completeness software checkM_v1.1 contamination score 2.71 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205162 of study SRP200540. sample derived from SAMN11949739 sample name MGG28974_1680015398 scientific_name Ligilactobacillus murinus sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934249 SAMEA112933649 76936 Helicobacter typhlonius This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205162. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933649 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28975_1680015398 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 98.47 completeness software checkM_v1.1 contamination score 2.12 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205162 of study SRP200540. sample derived from SAMN11949739 sample name MGG28975_1680015398 scientific_name Helicobacter typhlonius sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934250 SAMEA112933650 244328 uncultured Clostridia bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205162. ENA-FIRST-PUBLIC 2023-04-23T00:20:11Z ENA-LAST-UPDATE 2023-04-23T00:20:11Z External Id SAMEA112933650 INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28977_1680015408 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 97.2 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205162 of study SRP200540. sample derived from SAMN11949739 sample name MGG28977_1680015408 scientific_name uncultured Clostridia bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934251 SAMEA112933651 172733 uncultured Eubacteriales bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205162. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933651 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG28978_1680015351 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 95.81 completeness software checkM_v1.1 contamination score 3.02 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205162 of study SRP200540. sample derived from SAMN11949739 sample name MGG28978_1680015351 scientific_name uncultured Eubacteriales bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934252 SAMEA112933652 1263098 uncultured Parasutterella sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205162. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933652 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28979_1680015432 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 99.38 completeness software checkM_v1.1 contamination score 0.75 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205162 of study SRP200540. sample derived from SAMN11949739 sample name MGG28979_1680015432 scientific_name uncultured Parasutterella sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934253 SAMEA112933653 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205162. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933653 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28980_1680015361 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 97.65 completeness software checkM_v1.1 contamination score 1.34 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205162 of study SRP200540. sample derived from SAMN11949739 sample name MGG28980_1680015361 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934254 SAMEA112933654 876091 uncultured Oscillibacter sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205162. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933654 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28981_1680015388 assembly quality Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 97.65 completeness software checkM_v1.1 contamination score 0.67 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205162 of study SRP200540. sample derived from SAMN11949739 sample name MGG28981_1680015388 scientific_name uncultured Oscillibacter sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934255 SAMEA112933655 194843 uncultured Bacteroidales bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205162. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933655 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28983_1680015409 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 98.81 completeness software checkM_v1.1 contamination score 0.13 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205162 of study SRP200540. sample derived from SAMN11949739 sample name MGG28983_1680015409 scientific_name uncultured Bacteroidales bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934256 SAMEA112933656 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205162. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933656 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28985_1680015397 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 94.83 completeness software checkM_v1.1 contamination score 1.15 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205162 of study SRP200540. sample derived from SAMN11949739 sample name MGG28985_1680015397 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934257 SAMEA112933657 821 Phocaeicola vulgatus This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205162. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933657 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28986_1680015374 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 77.07 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205162 of study SRP200540. sample derived from SAMN11949739 sample name MGG28986_1680015374 scientific_name Phocaeicola vulgatus sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934258 SAMEA112933658 85831 Bacteroides acidifaciens This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205162. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933658 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28987_1680015405 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 58.36 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205162 of study SRP200540. sample derived from SAMN11949739 sample name MGG28987_1680015405 scientific_name Bacteroides acidifaciens sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934259 SAMEA112933659 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205162. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933659 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28988_1680015350 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 63.16 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205162 of study SRP200540. sample derived from SAMN11949739 sample name MGG28988_1680015350 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934260 SAMEA112933660 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205162. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933660 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28989_1680015352 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 92.64 completeness software checkM_v1.1 contamination score 0.13 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205162 of study SRP200540. sample derived from SAMN11949739 sample name MGG28989_1680015352 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934261 SAMEA112933661 165185 uncultured Eubacterium sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205162. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933661 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28990_1680015432 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 51.72 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205162 of study SRP200540. sample derived from SAMN11949739 sample name MGG28990_1680015432 scientific_name uncultured Eubacterium sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934262 SAMEA112933662 286138 uncultured Dorea sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205162. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933662 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28991_1680015368 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 93.27 completeness software checkM_v1.1 contamination score 0.19 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205162 of study SRP200540. sample derived from SAMN11949739 sample name MGG28991_1680015368 scientific_name uncultured Dorea sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934263 SAMEA112933663 348578 uncultured Porphyromonadaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205162. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933663 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28992_1680015362 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 94.91 completeness software checkM_v1.1 contamination score 0.25 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205162 of study SRP200540. sample derived from SAMN11949739 sample name MGG28992_1680015362 scientific_name uncultured Porphyromonadaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934264 SAMEA112933664 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205162. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933664 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28993_1680015399 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 94.03 completeness software checkM_v1.1 contamination score 1.97 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205162 of study SRP200540. sample derived from SAMN11949739 sample name MGG28993_1680015399 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934265 SAMEA112933665 1981031 uncultured Mailhella sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205162. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933665 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28995_1680015429 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 95.27 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205162 of study SRP200540. sample derived from SAMN11949739 sample name MGG28995_1680015429 scientific_name uncultured Mailhella sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934266 SAMEA112933666 348578 uncultured Porphyromonadaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205162. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933666 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28996_1680015427 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 66.29 completeness software checkM_v1.1 contamination score 0.38 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205162 of study SRP200540. sample derived from SAMN11949739 sample name MGG28996_1680015427 scientific_name uncultured Porphyromonadaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934267 SAMEA112933667 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205162. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933667 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28997_1680015423 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 94.15 completeness software checkM_v1.1 contamination score 0.58 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205162 of study SRP200540. sample derived from SAMN11949739 sample name MGG28997_1680015423 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934268 SAMEA112933668 165185 uncultured Eubacterium sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205162. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933668 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28998_1680015385 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 86.72 completeness software checkM_v1.1 contamination score 1.15 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205162 of study SRP200540. sample derived from SAMN11949739 sample name MGG28998_1680015385 scientific_name uncultured Eubacterium sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934269 SAMEA112933669 348578 uncultured Porphyromonadaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205162. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933669 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG28999_1680015403 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 54.23 completeness software checkM_v1.1 contamination score 0.38 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205162 of study SRP200540. sample derived from SAMN11949739 sample name MGG28999_1680015403 scientific_name uncultured Porphyromonadaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934270 SAMEA112933670 224209 uncultured Bacilli bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205162. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933670 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29000_1680015383 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 91.01 completeness software checkM_v1.1 contamination score 6.23 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205162 of study SRP200540. sample derived from SAMN11949739 sample name MGG29000_1680015383 scientific_name uncultured Bacilli bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934271 SAMEA112933671 159272 uncultured Prevotella sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205162. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933671 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29001_1680015340 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 66.3 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205162 of study SRP200540. sample derived from SAMN11949739 sample name MGG29001_1680015340 scientific_name uncultured Prevotella sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934272 SAMEA112933672 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205162. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933672 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29002_1680015429 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 90.21 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205162 of study SRP200540. sample derived from SAMN11949739 sample name MGG29002_1680015429 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934273 SAMEA112933673 60246 Helicobacter ganmani This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205162. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933673 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29003_1680015424 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 99.47 completeness software checkM_v1.1 contamination score 0.18 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205162 of study SRP200540. sample derived from SAMN11949739 sample name MGG29003_1680015424 scientific_name Helicobacter ganmani sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934274 SAMEA112933674 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205162. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933674 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29004_1680015414 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 56.65 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205162 of study SRP200540. sample derived from SAMN11949739 sample name MGG29004_1680015414 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934275 SAMEA112933675 1598 Limosilactobacillus reuteri This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205162. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933675 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29005_1680015411 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 99.45 completeness software checkM_v1.1 contamination score 0.64 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205162 of study SRP200540. sample derived from SAMN11949739 sample name MGG29005_1680015411 scientific_name Limosilactobacillus reuteri sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934276 SAMEA112933676 244328 uncultured Clostridia bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205162. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933676 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29006_1680015386 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 71.75 completeness software checkM_v1.1 contamination score 2.28 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205162 of study SRP200540. sample derived from SAMN11949739 sample name MGG29006_1680015386 scientific_name uncultured Clostridia bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934277 SAMEA112933677 244328 uncultured Clostridia bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205162. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933677 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29007_1680015399 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 79.31 completeness software checkM_v1.1 contamination score 2.24 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205162 of study SRP200540. sample derived from SAMN11949739 sample name MGG29007_1680015399 scientific_name uncultured Clostridia bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934278 SAMEA112933678 348578 uncultured Porphyromonadaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205162. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933678 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29008_1680015427 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 96.79 completeness software checkM_v1.1 contamination score 1.13 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205162 of study SRP200540. sample derived from SAMN11949739 sample name MGG29008_1680015427 scientific_name uncultured Porphyromonadaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934279 SAMEA112933679 655306 uncultured Erysipelotrichales bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205162. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933679 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29009_1680015342 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 95.28 completeness software checkM_v1.1 contamination score 3.77 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205162 of study SRP200540. sample derived from SAMN11949739 sample name MGG29009_1680015342 scientific_name uncultured Erysipelotrichales bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934280 SAMEA112933680 823 Parabacteroides distasonis This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205162. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933680 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29010_1680015391 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 74.01 completeness software checkM_v1.1 contamination score 0.77 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205162 of study SRP200540. sample derived from SAMN11949739 sample name MGG29010_1680015391 scientific_name Parabacteroides distasonis sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934281 SAMEA112933681 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205162. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933681 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29011_1680015376 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 77.16 completeness software checkM_v1.1 contamination score 4.31 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205162 of study SRP200540. sample derived from SAMN11949739 sample name MGG29011_1680015376 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934282 SAMEA112933682 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205162. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933682 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29012_1680015417 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 72.71 completeness software checkM_v1.1 contamination score 4.4 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205162 of study SRP200540. sample derived from SAMN11949739 sample name MGG29012_1680015417 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934283 SAMEA112933683 538949 uncultured Alistipes sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205162. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933683 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29013_1680015430 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 86.88 completeness software checkM_v1.1 contamination score 1.68 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205162 of study SRP200540. sample derived from SAMN11949739 sample name MGG29013_1680015430 scientific_name uncultured Alistipes sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934284 SAMEA112933684 538949 uncultured Alistipes sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205164. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933684 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29014_1680015390 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 93.61 completeness software checkM_v1.1 contamination score 3.53 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205164 of study SRP200540. sample derived from SAMN11949737 sample name MGG29014_1680015390 scientific_name uncultured Alistipes sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934285 SAMEA112933685 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205164. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933685 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:13Z INSDC last update 2023-04-23T00:20:13Z INSDC status public Submitter Id MGG29017_1680015412 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 94.25 completeness software checkM_v1.1 contamination score 0.57 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205164 of study SRP200540. sample derived from SAMN11949737 sample name MGG29017_1680015412 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934286 SAMEA112933686 1981031 uncultured Mailhella sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205164. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933686 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:13Z INSDC last update 2023-04-23T00:20:13Z INSDC status public Submitter Id MGG29019_1680015352 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 95.27 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205164 of study SRP200540. sample derived from SAMN11949737 sample name MGG29019_1680015352 scientific_name uncultured Mailhella sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934287 SAMEA112933687 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205164. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933687 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:13Z INSDC last update 2023-04-23T00:20:13Z INSDC status public Submitter Id MGG29020_1680015425 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 97.65 completeness software checkM_v1.1 contamination score 1.34 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205164 of study SRP200540. sample derived from SAMN11949737 sample name MGG29020_1680015425 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934288 SAMEA112933688 244328 uncultured Clostridia bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205164. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933688 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:13Z INSDC last update 2023-04-23T00:20:13Z INSDC status public Submitter Id MGG29021_1680015365 assembly quality Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 96.53 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205164 of study SRP200540. sample derived from SAMN11949737 sample name MGG29021_1680015365 scientific_name uncultured Clostridia bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934289 SAMEA112933689 286138 uncultured Dorea sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205164. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933689 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:13Z INSDC last update 2023-04-23T00:20:13Z INSDC status public Submitter Id MGG29022_1680015342 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 83.63 completeness software checkM_v1.1 contamination score 0.19 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205164 of study SRP200540. sample derived from SAMN11949737 sample name MGG29022_1680015342 scientific_name uncultured Dorea sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934290 SAMEA112933690 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205164. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933690 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:13Z INSDC last update 2023-04-23T00:20:13Z INSDC status public Submitter Id MGG29023_1680015399 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 96.2 completeness software checkM_v1.1 contamination score 2.37 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205164 of study SRP200540. sample derived from SAMN11949737 sample name MGG29023_1680015399 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934291 SAMEA112933691 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205164. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933691 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:13Z INSDC last update 2023-04-23T00:20:13Z INSDC status public Submitter Id MGG29024_1680015411 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 55.28 completeness software checkM_v1.1 contamination score 0.38 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205164 of study SRP200540. sample derived from SAMN11949737 sample name MGG29024_1680015411 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934292 SAMEA112933692 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205164. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933692 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:13Z INSDC last update 2023-04-23T00:20:13Z INSDC status public Submitter Id MGG29025_1680015373 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 98.85 completeness software checkM_v1.1 contamination score 1.15 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205164 of study SRP200540. sample derived from SAMN11949737 sample name MGG29025_1680015373 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934293 SAMEA112933693 172733 uncultured Eubacteriales bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205164. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933693 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:13Z INSDC last update 2023-04-23T00:20:13Z INSDC status public Submitter Id MGG29026_1680015357 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 67.09 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205164 of study SRP200540. sample derived from SAMN11949737 sample name MGG29026_1680015357 scientific_name uncultured Eubacteriales bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934294 SAMEA112933694 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205164. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933694 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:09Z INSDC last update 2023-04-23T00:20:09Z INSDC status public Submitter Id MGG29027_1680015394 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 88.49 completeness software checkM_v1.1 contamination score 0.94 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205164 of study SRP200540. sample derived from SAMN11949737 sample name MGG29027_1680015394 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934295 SAMEA112933695 165185 uncultured Eubacterium sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205164. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933695 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:09Z INSDC last update 2023-04-23T00:20:09Z INSDC status public Submitter Id MGG29028_1680015431 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 54.36 completeness software checkM_v1.1 contamination score 0.67 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205164 of study SRP200540. sample derived from SAMN11949737 sample name MGG29028_1680015431 scientific_name uncultured Eubacterium sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934296 SAMEA112933696 194843 uncultured Bacteroidales bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205164. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933696 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:09Z INSDC last update 2023-04-23T00:20:09Z INSDC status public Submitter Id MGG29029_1680015418 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 77.67 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205164 of study SRP200540. sample derived from SAMN11949737 sample name MGG29029_1680015418 scientific_name uncultured Bacteroidales bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934297 SAMEA112933697 165185 uncultured Eubacterium sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205164. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933697 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:09Z INSDC last update 2023-04-23T00:20:09Z INSDC status public Submitter Id MGG29030_1680015367 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 51.72 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205164 of study SRP200540. sample derived from SAMN11949737 sample name MGG29030_1680015367 scientific_name uncultured Eubacterium sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934298 SAMEA112933698 162156 uncultured Bacteroides sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205164. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933698 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:09Z INSDC last update 2023-04-23T00:20:09Z INSDC status public Submitter Id MGG29031_1680015436 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 63.18 completeness software checkM_v1.1 contamination score 0.5 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205164 of study SRP200540. sample derived from SAMN11949737 sample name MGG29031_1680015436 scientific_name uncultured Bacteroides sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934299 SAMEA112933699 194843 uncultured Bacteroidales bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205164. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933699 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29032_1680015421 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 88.21 completeness software checkM_v1.1 contamination score 0.75 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205164 of study SRP200540. sample derived from SAMN11949737 sample name MGG29032_1680015421 scientific_name uncultured Bacteroidales bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934300 SAMEA112933700 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205164. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933700 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29033_1680015362 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 97.08 completeness software checkM_v1.1 contamination score 5.56 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205164 of study SRP200540. sample derived from SAMN11949737 sample name MGG29033_1680015362 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934301 SAMEA112933701 286138 uncultured Dorea sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205164. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933701 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29034_1680015391 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 85.58 completeness software checkM_v1.1 contamination score 0.88 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205164 of study SRP200540. sample derived from SAMN11949737 sample name MGG29034_1680015391 scientific_name uncultured Dorea sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934302 SAMEA112933702 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205164. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933702 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29035_1680015347 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 93.67 completeness software checkM_v1.1 contamination score 0.47 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205164 of study SRP200540. sample derived from SAMN11949737 sample name MGG29035_1680015347 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934303 SAMEA112933703 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205164. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933703 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29037_1680015409 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 89.08 completeness software checkM_v1.1 contamination score 0.42 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205164 of study SRP200540. sample derived from SAMN11949737 sample name MGG29037_1680015409 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934304 SAMEA112933704 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205164. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933704 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29039_1680015359 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 95.47 completeness software checkM_v1.1 contamination score 2.2 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205164 of study SRP200540. sample derived from SAMN11949737 sample name MGG29039_1680015359 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934305 SAMEA112933705 1598 Limosilactobacillus reuteri This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205164. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933705 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29040_1680015371 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 98.09 completeness software checkM_v1.1 contamination score 3.28 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205164 of study SRP200540. sample derived from SAMN11949737 sample name MGG29040_1680015371 scientific_name Limosilactobacillus reuteri sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934306 SAMEA112933706 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205164. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933706 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29042_1680015371 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 67.19 completeness software checkM_v1.1 contamination score 0.75 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205164 of study SRP200540. sample derived from SAMN11949737 sample name MGG29042_1680015371 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934307 SAMEA112933707 876416 uncultured Odoribacter sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205164. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933707 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29043_1680015407 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 91.94 completeness software checkM_v1.1 contamination score 1.61 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205164 of study SRP200540. sample derived from SAMN11949737 sample name MGG29043_1680015407 scientific_name uncultured Odoribacter sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934308 SAMEA112933708 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205164. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933708 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29044_1680015425 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 65.64 completeness software checkM_v1.1 contamination score 0.57 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205164 of study SRP200540. sample derived from SAMN11949737 sample name MGG29044_1680015425 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934309 SAMEA112933709 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205164. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933709 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29045_1680015372 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 80.09 completeness software checkM_v1.1 contamination score 4.19 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205164 of study SRP200540. sample derived from SAMN11949737 sample name MGG29045_1680015372 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934310 SAMEA112933710 538949 uncultured Alistipes sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205164. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933710 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29046_1680015371 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 85.16 completeness software checkM_v1.1 contamination score 2.02 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205164 of study SRP200540. sample derived from SAMN11949737 sample name MGG29046_1680015371 scientific_name uncultured Alistipes sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934311 SAMEA112933711 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205164. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933711 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29047_1680015428 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 83.67 completeness software checkM_v1.1 contamination score 3.02 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205164 of study SRP200540. sample derived from SAMN11949737 sample name MGG29047_1680015428 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934312 SAMEA112933712 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205164. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933712 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29048_1680015421 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 62.78 completeness software checkM_v1.1 contamination score 1.89 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205164 of study SRP200540. sample derived from SAMN11949737 sample name MGG29048_1680015421 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934313 SAMEA112933713 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205164. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933713 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29049_1680015338 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 70.16 completeness software checkM_v1.1 contamination score 1.15 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205164 of study SRP200540. sample derived from SAMN11949737 sample name MGG29049_1680015338 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934314 SAMEA112933714 194843 uncultured Bacteroidales bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205164. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933714 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29050_1680015344 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 60.66 completeness software checkM_v1.1 contamination score 0.24 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205164 of study SRP200540. sample derived from SAMN11949737 sample name MGG29050_1680015344 scientific_name uncultured Bacteroidales bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934315 SAMEA112933715 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205164. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933715 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29051_1680015410 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 55.55 completeness software checkM_v1.1 contamination score 0.4 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205164 of study SRP200540. sample derived from SAMN11949737 sample name MGG29051_1680015410 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934316 SAMEA112933716 1598 Limosilactobacillus reuteri This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205165. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933716 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29052_1680015420 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 95.63 completeness software checkM_v1.1 contamination score 4.79 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205165 of study SRP200540. sample derived from SAMN11949738 sample name MGG29052_1680015420 scientific_name Limosilactobacillus reuteri sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934317 SAMEA112933717 165186 uncultured Ruminococcus sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205165. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933717 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29053_1680015425 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 97.32 completeness software checkM_v1.1 contamination score 2.01 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205165 of study SRP200540. sample derived from SAMN11949738 sample name MGG29053_1680015425 scientific_name uncultured Ruminococcus sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934318 SAMEA112933718 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205165. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933718 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29055_1680015365 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 97.65 completeness software checkM_v1.1 contamination score 1.34 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205165 of study SRP200540. sample derived from SAMN11949738 sample name MGG29055_1680015365 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934319 SAMEA112933719 1981031 uncultured Mailhella sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205165. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933719 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29056_1680015417 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 95.27 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205165 of study SRP200540. sample derived from SAMN11949738 sample name MGG29056_1680015417 scientific_name uncultured Mailhella sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934320 SAMEA112933720 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205165. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933720 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29057_1680015343 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 98.85 completeness software checkM_v1.1 contamination score 1.15 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205165 of study SRP200540. sample derived from SAMN11949738 sample name MGG29057_1680015343 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934321 SAMEA112933721 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205165. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933721 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29058_1680015403 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 95.98 completeness software checkM_v1.1 contamination score 0.57 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205165 of study SRP200540. sample derived from SAMN11949738 sample name MGG29058_1680015403 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934322 SAMEA112933722 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205165. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933722 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG29059_1680015425 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 94.83 completeness software checkM_v1.1 contamination score 1.15 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205165 of study SRP200540. sample derived from SAMN11949738 sample name MGG29059_1680015425 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934323 SAMEA112933723 172733 uncultured Eubacteriales bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205165. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933723 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG29060_1680015425 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 99.37 completeness software checkM_v1.1 contamination score 0.16 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205165 of study SRP200540. sample derived from SAMN11949738 sample name MGG29060_1680015425 scientific_name uncultured Eubacteriales bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934324 SAMEA112933724 194843 uncultured Bacteroidales bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205165. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933724 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG29061_1680015414 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 89.75 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205165 of study SRP200540. sample derived from SAMN11949738 sample name MGG29061_1680015414 scientific_name uncultured Bacteroidales bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934325 SAMEA112933725 165185 uncultured Eubacterium sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205165. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933725 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG29062_1680015411 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 63.65 completeness software checkM_v1.1 contamination score 0.67 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205165 of study SRP200540. sample derived from SAMN11949738 sample name MGG29062_1680015411 scientific_name uncultured Eubacterium sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934326 SAMEA112933726 151781 Lactobacillus intestinalis This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205165. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933726 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG29063_1680015419 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 55.17 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205165 of study SRP200540. sample derived from SAMN11949738 sample name MGG29063_1680015419 scientific_name Lactobacillus intestinalis sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934327 SAMEA112933727 33959 Lactobacillus johnsonii This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205165. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933727 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG29064_1680015417 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 89.03 completeness software checkM_v1.1 contamination score 5.43 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205165 of study SRP200540. sample derived from SAMN11949738 sample name MGG29064_1680015417 scientific_name Lactobacillus johnsonii sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934328 SAMEA112933728 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205165. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933728 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG29065_1680015344 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 96.1 completeness software checkM_v1.1 contamination score 2.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205165 of study SRP200540. sample derived from SAMN11949738 sample name MGG29065_1680015344 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934329 SAMEA112933729 348578 uncultured Porphyromonadaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205165. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933729 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29066_1680015396 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 89.12 completeness software checkM_v1.1 contamination score 0.75 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205165 of study SRP200540. sample derived from SAMN11949738 sample name MGG29066_1680015396 scientific_name uncultured Porphyromonadaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934330 SAMEA112933730 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205165. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933730 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG29067_1680015371 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 96.98 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205165 of study SRP200540. sample derived from SAMN11949738 sample name MGG29067_1680015371 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934331 SAMEA112933731 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205165. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933731 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG29068_1680015368 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 96.42 completeness software checkM_v1.1 contamination score 1.13 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205165 of study SRP200540. sample derived from SAMN11949738 sample name MGG29068_1680015368 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934332 SAMEA112933732 286138 uncultured Dorea sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205165. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933732 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG29069_1680015348 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 87.72 completeness software checkM_v1.1 contamination score 2.24 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205165 of study SRP200540. sample derived from SAMN11949738 sample name MGG29069_1680015348 scientific_name uncultured Dorea sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934333 SAMEA112933733 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205165. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933733 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG29071_1680015374 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 92.03 completeness software checkM_v1.1 contamination score 3.15 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205165 of study SRP200540. sample derived from SAMN11949738 sample name MGG29071_1680015374 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934334 SAMEA112933734 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205165. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933734 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG29072_1680015348 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 55.26 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205165 of study SRP200540. sample derived from SAMN11949738 sample name MGG29072_1680015348 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934336 SAMEA112933736 165185 uncultured Eubacterium sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205165. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933736 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG29074_1680015437 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 93.85 completeness software checkM_v1.1 contamination score 1.25 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205165 of study SRP200540. sample derived from SAMN11949738 sample name MGG29074_1680015437 scientific_name uncultured Eubacterium sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934337 SAMEA112933737 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205165. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933737 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG29075_1680015400 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 91.86 completeness software checkM_v1.1 contamination score 2.83 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205165 of study SRP200540. sample derived from SAMN11949738 sample name MGG29075_1680015400 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934338 SAMEA112933738 162156 uncultured Bacteroides sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205165. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933738 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG29076_1680015391 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 93.05 completeness software checkM_v1.1 contamination score 1.86 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205165 of study SRP200540. sample derived from SAMN11949738 sample name MGG29076_1680015391 scientific_name uncultured Bacteroides sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934339 SAMEA112933739 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205165. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933739 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG29077_1680015404 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 80.21 completeness software checkM_v1.1 contamination score 3.75 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205165 of study SRP200540. sample derived from SAMN11949738 sample name MGG29077_1680015404 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934335 SAMEA112933735 244328 uncultured Clostridia bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205165. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933735 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG29073_1680015344 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 97.2 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205165 of study SRP200540. sample derived from SAMN11949738 sample name MGG29073_1680015344 scientific_name uncultured Clostridia bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934340 SAMEA112933740 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205165. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933740 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG29078_1680015426 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 91.13 completeness software checkM_v1.1 contamination score 0.83 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205165 of study SRP200540. sample derived from SAMN11949738 sample name MGG29078_1680015426 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934341 SAMEA112933741 348578 uncultured Porphyromonadaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205165. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933741 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG29079_1680015398 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 92.52 completeness software checkM_v1.1 contamination score 1.89 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205165 of study SRP200540. sample derived from SAMN11949738 sample name MGG29079_1680015398 scientific_name uncultured Porphyromonadaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934342 SAMEA112933742 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205165. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933742 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG29080_1680015416 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-30 completeness score 79.32 completeness software checkM_v1.1 contamination score 0.81 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205165 of study SRP200540. sample derived from SAMN11949738 sample name MGG29080_1680015416 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934343 SAMEA112933743 244328 uncultured Clostridia bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205166. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933743 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29081_1680015401 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 91.28 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205166 of study SRP200540. sample derived from SAMN11955128 sample name MGG29081_1680015401 scientific_name uncultured Clostridia bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934344 SAMEA112933744 538949 uncultured Alistipes sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205166. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933744 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29082_1680015416 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 99.04 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205166 of study SRP200540. sample derived from SAMN11955128 sample name MGG29082_1680015416 scientific_name uncultured Alistipes sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934345 SAMEA112933745 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205166. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933745 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29083_1680015400 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 97.97 completeness software checkM_v1.1 contamination score 1.35 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205166 of study SRP200540. sample derived from SAMN11955128 sample name MGG29083_1680015400 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934346 SAMEA112933746 1545742 uncultured Christensenella sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205166. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933746 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29084_1680015372 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 94.35 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205166 of study SRP200540. sample derived from SAMN11955128 sample name MGG29084_1680015372 scientific_name uncultured Christensenella sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934347 SAMEA112933747 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205166. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933747 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29085_1680015381 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 92.26 completeness software checkM_v1.1 contamination score 0.38 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205166 of study SRP200540. sample derived from SAMN11955128 sample name MGG29085_1680015381 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934348 SAMEA112933748 1981031 uncultured Mailhella sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205166. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933748 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29086_1680015355 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 98.22 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205166 of study SRP200540. sample derived from SAMN11955128 sample name MGG29086_1680015355 scientific_name uncultured Mailhella sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934349 SAMEA112933749 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205166. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933749 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29087_1680015369 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 97.76 completeness software checkM_v1.1 contamination score 4.36 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205166 of study SRP200540. sample derived from SAMN11955128 sample name MGG29087_1680015369 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934350 SAMEA112933750 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205166. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933750 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29088_1680015337 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 85.09 completeness software checkM_v1.1 contamination score 0.38 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205166 of study SRP200540. sample derived from SAMN11955128 sample name MGG29088_1680015337 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934351 SAMEA112933751 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205166. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933751 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29090_1680015397 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 97.7 completeness software checkM_v1.1 contamination score 2.59 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205166 of study SRP200540. sample derived from SAMN11955128 sample name MGG29090_1680015397 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934352 SAMEA112933752 1671927 uncultured Acetatifactor sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205166. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933752 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29091_1680015368 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 84.2 completeness software checkM_v1.1 contamination score 0.69 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205166 of study SRP200540. sample derived from SAMN11955128 sample name MGG29091_1680015368 scientific_name uncultured Acetatifactor sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934353 SAMEA112933753 60246 Helicobacter ganmani This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205166. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933753 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29093_1680015338 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 99.82 completeness software checkM_v1.1 contamination score 0.35 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205166 of study SRP200540. sample derived from SAMN11955128 sample name MGG29093_1680015338 scientific_name Helicobacter ganmani sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934354 SAMEA112933754 948465 uncultured Vampirovibrio sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205166. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933754 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29094_1680015434 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 90.31 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205166 of study SRP200540. sample derived from SAMN11955128 sample name MGG29094_1680015434 scientific_name uncultured Vampirovibrio sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934355 SAMEA112933755 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205166. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933755 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29095_1680015368 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 85.09 completeness software checkM_v1.1 contamination score 0.13 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205166 of study SRP200540. sample derived from SAMN11955128 sample name MGG29095_1680015368 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934356 SAMEA112933756 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205166. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933756 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29096_1680015395 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 75.86 completeness software checkM_v1.1 contamination score 0.77 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205166 of study SRP200540. sample derived from SAMN11955128 sample name MGG29096_1680015395 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934357 SAMEA112933757 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205166. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933757 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29097_1680015429 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 93.1 completeness software checkM_v1.1 contamination score 0.96 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205166 of study SRP200540. sample derived from SAMN11955128 sample name MGG29097_1680015429 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934358 SAMEA112933758 76936 Helicobacter typhlonius This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205166. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933758 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29098_1680015353 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 98.47 completeness software checkM_v1.1 contamination score 1.77 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205166 of study SRP200540. sample derived from SAMN11955128 sample name MGG29098_1680015353 scientific_name Helicobacter typhlonius sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934359 SAMEA112933759 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205166. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933759 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29099_1680015392 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 94.83 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205166 of study SRP200540. sample derived from SAMN11955128 sample name MGG29099_1680015392 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934360 SAMEA112933760 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205166. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933760 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29100_1680015351 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 96.55 completeness software checkM_v1.1 contamination score 2.67 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205166 of study SRP200540. sample derived from SAMN11955128 sample name MGG29100_1680015351 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934361 SAMEA112933761 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205166. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933761 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29102_1680015411 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 97.13 completeness software checkM_v1.1 contamination score 1.72 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205166 of study SRP200540. sample derived from SAMN11955128 sample name MGG29102_1680015411 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934362 SAMEA112933762 286138 uncultured Dorea sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205166. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933762 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29103_1680015423 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 75.83 completeness software checkM_v1.1 contamination score 1.46 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205166 of study SRP200540. sample derived from SAMN11955128 sample name MGG29103_1680015423 scientific_name uncultured Dorea sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934363 SAMEA112933763 286138 uncultured Dorea sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205166. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933763 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29104_1680015427 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 91.81 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205166 of study SRP200540. sample derived from SAMN11955128 sample name MGG29104_1680015427 scientific_name uncultured Dorea sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934364 SAMEA112933764 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205166. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933764 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29105_1680015340 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 94.97 completeness software checkM_v1.1 contamination score 3.36 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205166 of study SRP200540. sample derived from SAMN11955128 sample name MGG29105_1680015340 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934365 SAMEA112933765 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205166. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933765 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29106_1680015425 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 96.55 completeness software checkM_v1.1 contamination score 0.86 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205166 of study SRP200540. sample derived from SAMN11955128 sample name MGG29106_1680015425 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934366 SAMEA112933766 165185 uncultured Eubacterium sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205166. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933766 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29107_1680015393 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 78.52 completeness software checkM_v1.1 contamination score 0.67 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205166 of study SRP200540. sample derived from SAMN11955128 sample name MGG29107_1680015393 scientific_name uncultured Eubacterium sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934367 SAMEA112933767 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205166. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933767 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29108_1680015386 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 93.94 completeness software checkM_v1.1 contamination score 0.67 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205166 of study SRP200540. sample derived from SAMN11955128 sample name MGG29108_1680015386 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934368 SAMEA112933768 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205166. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933768 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29109_1680015408 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 94.79 completeness software checkM_v1.1 contamination score 5.36 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205166 of study SRP200540. sample derived from SAMN11955128 sample name MGG29109_1680015408 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934369 SAMEA112933769 2768039 uncultured Duncaniella sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205166. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933769 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29110_1680015369 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 55.28 completeness software checkM_v1.1 contamination score 0.38 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205166 of study SRP200540. sample derived from SAMN11955128 sample name MGG29110_1680015369 scientific_name uncultured Duncaniella sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934370 SAMEA112933770 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205166. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933770 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29111_1680015407 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 96.2 completeness software checkM_v1.1 contamination score 2.35 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205166 of study SRP200540. sample derived from SAMN11955128 sample name MGG29111_1680015407 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934371 SAMEA112933771 876416 uncultured Odoribacter sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205166. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933771 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:13Z INSDC last update 2023-04-23T00:20:13Z INSDC status public Submitter Id MGG29112_1680015414 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 54.03 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205166 of study SRP200540. sample derived from SAMN11955128 sample name MGG29112_1680015414 scientific_name uncultured Odoribacter sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934372 SAMEA112933772 194843 uncultured Bacteroidales bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205166. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933772 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:13Z INSDC last update 2023-04-23T00:20:13Z INSDC status public Submitter Id MGG29113_1680015347 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 89.44 completeness software checkM_v1.1 contamination score 0.48 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205166 of study SRP200540. sample derived from SAMN11955128 sample name MGG29113_1680015347 scientific_name uncultured Bacteroidales bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934373 SAMEA112933773 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205166. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933773 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:13Z INSDC last update 2023-04-23T00:20:13Z INSDC status public Submitter Id MGG29114_1680015375 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 61.56 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205166 of study SRP200540. sample derived from SAMN11955128 sample name MGG29114_1680015375 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934374 SAMEA112933774 165185 uncultured Eubacterium sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205166. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933774 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:13Z INSDC last update 2023-04-23T00:20:13Z INSDC status public Submitter Id MGG29115_1680015362 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 95.85 completeness software checkM_v1.1 contamination score 2.95 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205166 of study SRP200540. sample derived from SAMN11955128 sample name MGG29115_1680015362 scientific_name uncultured Eubacterium sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934375 SAMEA112933775 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205166. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933775 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:13Z INSDC last update 2023-04-23T00:20:13Z INSDC status public Submitter Id MGG29116_1680015360 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 85.44 completeness software checkM_v1.1 contamination score 3.16 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205166 of study SRP200540. sample derived from SAMN11955128 sample name MGG29116_1680015360 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934376 SAMEA112933776 876416 uncultured Odoribacter sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205166. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933776 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:13Z INSDC last update 2023-04-23T00:20:13Z INSDC status public Submitter Id MGG29117_1680015380 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 95.7 completeness software checkM_v1.1 contamination score 0.54 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205166 of study SRP200540. sample derived from SAMN11955128 sample name MGG29117_1680015380 scientific_name uncultured Odoribacter sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934377 SAMEA112933777 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205166. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933777 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:13Z INSDC last update 2023-04-23T00:20:13Z INSDC status public Submitter Id MGG29118_1680015401 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 94.41 completeness software checkM_v1.1 contamination score 2.91 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205166 of study SRP200540. sample derived from SAMN11955128 sample name MGG29118_1680015401 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934378 SAMEA112933778 2682970 uncultured Candidatus Melainabacteria bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205166. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933778 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:13Z INSDC last update 2023-04-23T00:20:13Z INSDC status public Submitter Id MGG29119_1680015364 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 85.02 completeness software checkM_v1.1 contamination score 1.14 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205166 of study SRP200540. sample derived from SAMN11955128 sample name MGG29119_1680015364 scientific_name uncultured Candidatus Melainabacteria bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934379 SAMEA112933779 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205166. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933779 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:13Z INSDC last update 2023-04-23T00:20:13Z INSDC status public Submitter Id MGG29120_1680015410 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 96.64 completeness software checkM_v1.1 contamination score 2.68 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205166 of study SRP200540. sample derived from SAMN11955128 sample name MGG29120_1680015410 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934380 SAMEA112933780 876091 uncultured Oscillibacter sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205166. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933780 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:13Z INSDC last update 2023-04-23T00:20:13Z INSDC status public Submitter Id MGG29121_1680015389 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 87.86 completeness software checkM_v1.1 contamination score 2.01 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205166 of study SRP200540. sample derived from SAMN11955128 sample name MGG29121_1680015389 scientific_name uncultured Oscillibacter sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934381 SAMEA112933781 77133 uncultured bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205166. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933781 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:13Z INSDC last update 2023-04-23T00:20:13Z INSDC status public Submitter Id MGG29122_1680015417 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 94.44 completeness software checkM_v1.1 contamination score 4.44 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205166 of study SRP200540. sample derived from SAMN11955128 sample name MGG29122_1680015417 scientific_name uncultured bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934382 SAMEA112933782 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205166. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933782 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:13Z INSDC last update 2023-04-23T00:20:13Z INSDC status public Submitter Id MGG29123_1680015389 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 86.48 completeness software checkM_v1.1 contamination score 2.85 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205166 of study SRP200540. sample derived from SAMN11955128 sample name MGG29123_1680015389 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934383 SAMEA112933783 1671927 uncultured Acetatifactor sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205166. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933783 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:13Z INSDC last update 2023-04-23T00:20:13Z INSDC status public Submitter Id MGG29125_1680015350 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 78.23 completeness software checkM_v1.1 contamination score 1.44 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205166 of study SRP200540. sample derived from SAMN11955128 sample name MGG29125_1680015350 scientific_name uncultured Acetatifactor sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934384 SAMEA112933784 1671927 uncultured Acetatifactor sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205166. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933784 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:13Z INSDC last update 2023-04-23T00:20:13Z INSDC status public Submitter Id MGG29126_1680015431 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 89.33 completeness software checkM_v1.1 contamination score 3.5 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205166 of study SRP200540. sample derived from SAMN11955128 sample name MGG29126_1680015431 scientific_name uncultured Acetatifactor sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934385 SAMEA112933785 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205166. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933785 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:13Z INSDC last update 2023-04-23T00:20:13Z INSDC status public Submitter Id MGG29127_1680015425 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 90.71 completeness software checkM_v1.1 contamination score 3.16 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205166 of study SRP200540. sample derived from SAMN11955128 sample name MGG29127_1680015425 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934386 SAMEA112933786 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205166. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933786 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:13Z INSDC last update 2023-04-23T00:20:13Z INSDC status public Submitter Id MGG29128_1680015425 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 87.25 completeness software checkM_v1.1 contamination score 3.62 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205166 of study SRP200540. sample derived from SAMN11955128 sample name MGG29128_1680015425 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934387 SAMEA112933787 167967 uncultured Mycoplasma sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205166. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933787 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:13Z INSDC last update 2023-04-23T00:20:13Z INSDC status public Submitter Id MGG29129_1680015373 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 96.87 completeness software checkM_v1.1 contamination score 0.75 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205166 of study SRP200540. sample derived from SAMN11955128 sample name MGG29129_1680015373 scientific_name uncultured Mycoplasma sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934388 SAMEA112933788 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205166. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933788 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:13Z INSDC last update 2023-04-23T00:20:13Z INSDC status public Submitter Id MGG29130_1680015401 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 87.7 completeness software checkM_v1.1 contamination score 0.84 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205166 of study SRP200540. sample derived from SAMN11955128 sample name MGG29130_1680015401 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934389 SAMEA112933789 194926 uncultured Desulfovibrionaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205166. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933789 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:13Z INSDC last update 2023-04-23T00:20:13Z INSDC status public Submitter Id MGG29131_1680015397 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 93.49 completeness software checkM_v1.1 contamination score 1.18 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205166 of study SRP200540. sample derived from SAMN11955128 sample name MGG29131_1680015397 scientific_name uncultured Desulfovibrionaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934390 SAMEA112933790 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205166. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933790 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:13Z INSDC last update 2023-04-23T00:20:13Z INSDC status public Submitter Id MGG29132_1680015349 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 91.55 completeness software checkM_v1.1 contamination score 4.14 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205166 of study SRP200540. sample derived from SAMN11955128 sample name MGG29132_1680015349 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934391 SAMEA112933791 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205166. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933791 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:13Z INSDC last update 2023-04-23T00:20:13Z INSDC status public Submitter Id MGG29133_1680015337 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 88.7 completeness software checkM_v1.1 contamination score 2.06 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205166 of study SRP200540. sample derived from SAMN11955128 sample name MGG29133_1680015337 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934392 SAMEA112933792 331630 uncultured Erysipelotrichaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205166. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933792 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29134_1680015381 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 87.89 completeness software checkM_v1.1 contamination score 2.83 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205166 of study SRP200540. sample derived from SAMN11955128 sample name MGG29134_1680015381 scientific_name uncultured Erysipelotrichaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934393 SAMEA112933793 446043 uncultured Lachnospira sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205166. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933793 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29135_1680015433 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 65.6 completeness software checkM_v1.1 contamination score 0.36 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205166 of study SRP200540. sample derived from SAMN11955128 sample name MGG29135_1680015433 scientific_name uncultured Lachnospira sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934394 SAMEA112933794 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205166. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933794 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29136_1680015426 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 72.35 completeness software checkM_v1.1 contamination score 3.81 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205166 of study SRP200540. sample derived from SAMN11955128 sample name MGG29136_1680015426 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934395 SAMEA112933795 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205166. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933795 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29137_1680015398 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 81.02 completeness software checkM_v1.1 contamination score 3.37 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205166 of study SRP200540. sample derived from SAMN11955128 sample name MGG29137_1680015398 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934396 SAMEA112933796 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205166. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933796 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29138_1680015374 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 70.49 completeness software checkM_v1.1 contamination score 2.01 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205166 of study SRP200540. sample derived from SAMN11955128 sample name MGG29138_1680015374 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934397 SAMEA112933797 876416 uncultured Odoribacter sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205166. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933797 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29139_1680015341 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 71.78 completeness software checkM_v1.1 contamination score 0.54 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205166 of study SRP200540. sample derived from SAMN11955128 sample name MGG29139_1680015341 scientific_name uncultured Odoribacter sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934398 SAMEA112933798 2039243 uncultured Anaerotignum sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205166. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933798 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29141_1680015427 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 78.42 completeness software checkM_v1.1 contamination score 0.73 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205166 of study SRP200540. sample derived from SAMN11955128 sample name MGG29141_1680015427 scientific_name uncultured Anaerotignum sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934399 SAMEA112933799 1545742 uncultured Christensenella sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205166. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933799 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29142_1680015382 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 71.01 completeness software checkM_v1.1 contamination score 1.61 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205166 of study SRP200540. sample derived from SAMN11955128 sample name MGG29142_1680015382 scientific_name uncultured Christensenella sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934400 SAMEA112933800 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205167. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933800 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29143_1680015378 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 73.97 completeness software checkM_v1.1 contamination score 2.01 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205167 of study SRP200540. sample derived from SAMN11955129 sample name MGG29143_1680015378 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934401 SAMEA112933801 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205167. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933801 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29144_1680015368 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 58.05 completeness software checkM_v1.1 contamination score 1.32 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205167 of study SRP200540. sample derived from SAMN11955129 sample name MGG29144_1680015368 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934402 SAMEA112933802 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205167. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933802 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29145_1680015414 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 69.99 completeness software checkM_v1.1 contamination score 2.17 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205167 of study SRP200540. sample derived from SAMN11955129 sample name MGG29145_1680015414 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934403 SAMEA112933803 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205167. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933803 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29147_1680015410 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 73.75 completeness software checkM_v1.1 contamination score 2.87 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205167 of study SRP200540. sample derived from SAMN11955129 sample name MGG29147_1680015410 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934404 SAMEA112933804 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205167. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933804 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29148_1680015369 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 85.24 completeness software checkM_v1.1 contamination score 6.01 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205167 of study SRP200540. sample derived from SAMN11955129 sample name MGG29148_1680015369 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934405 SAMEA112933805 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205167. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933805 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29149_1680015355 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 80.37 completeness software checkM_v1.1 contamination score 1.66 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205167 of study SRP200540. sample derived from SAMN11955129 sample name MGG29149_1680015355 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934406 SAMEA112933806 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205167. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933806 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29151_1680015357 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 93.08 completeness software checkM_v1.1 contamination score 0.75 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205167 of study SRP200540. sample derived from SAMN11955129 sample name MGG29151_1680015357 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934407 SAMEA112933807 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205167. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933807 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29152_1680015339 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 79.87 completeness software checkM_v1.1 contamination score 0.69 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205167 of study SRP200540. sample derived from SAMN11955129 sample name MGG29152_1680015339 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934408 SAMEA112933808 203524 uncultured Eubacteriaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205167. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933808 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29153_1680015367 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 72.82 completeness software checkM_v1.1 contamination score 0.67 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205167 of study SRP200540. sample derived from SAMN11955129 sample name MGG29153_1680015367 scientific_name uncultured Eubacteriaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934409 SAMEA112933809 905011 uncultured Anaerotruncus sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205167. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933809 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29154_1680015368 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 72.93 completeness software checkM_v1.1 contamination score 0.85 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205167 of study SRP200540. sample derived from SAMN11955129 sample name MGG29154_1680015368 scientific_name uncultured Anaerotruncus sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934410 SAMEA112933810 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205167. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933810 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29156_1680015416 assembly quality Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 92.62 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205167 of study SRP200540. sample derived from SAMN11955129 sample name MGG29156_1680015416 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934411 SAMEA112933811 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205167. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933811 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29157_1680015411 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 88.23 completeness software checkM_v1.1 contamination score 1.22 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205167 of study SRP200540. sample derived from SAMN11955129 sample name MGG29157_1680015411 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934412 SAMEA112933812 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205167. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933812 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29158_1680015408 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 94.71 completeness software checkM_v1.1 contamination score 4.89 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205167 of study SRP200540. sample derived from SAMN11955129 sample name MGG29158_1680015408 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934413 SAMEA112933813 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205167. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933813 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29160_1680015356 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 52.01 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205167 of study SRP200540. sample derived from SAMN11955129 sample name MGG29160_1680015356 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934414 SAMEA112933814 163362 uncultured Bacteroidaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205167. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933814 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29161_1680015365 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 61.28 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205167 of study SRP200540. sample derived from SAMN11955129 sample name MGG29161_1680015365 scientific_name uncultured Bacteroidaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934415 SAMEA112933815 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205167. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933815 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29162_1680015401 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 93.66 completeness software checkM_v1.1 contamination score 0.05 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205167 of study SRP200540. sample derived from SAMN11955129 sample name MGG29162_1680015401 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934416 SAMEA112933816 538949 uncultured Alistipes sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205167. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933816 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29163_1680015406 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 54.49 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205167 of study SRP200540. sample derived from SAMN11955129 sample name MGG29163_1680015406 scientific_name uncultured Alistipes sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934417 SAMEA112933817 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205167. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933817 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29164_1680015392 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 96.62 completeness software checkM_v1.1 contamination score 1.35 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205167 of study SRP200540. sample derived from SAMN11955129 sample name MGG29164_1680015392 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934418 SAMEA112933818 194843 uncultured Bacteroidales bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205167. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933818 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29165_1680015419 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 95.0 completeness software checkM_v1.1 contamination score 0.48 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205167 of study SRP200540. sample derived from SAMN11955129 sample name MGG29165_1680015419 scientific_name uncultured Bacteroidales bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934419 SAMEA112933819 2163171 uncultured Kineothrix sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205167. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933819 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29166_1680015345 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 72.41 completeness software checkM_v1.1 contamination score 1.72 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205167 of study SRP200540. sample derived from SAMN11955129 sample name MGG29166_1680015345 scientific_name uncultured Kineothrix sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934420 SAMEA112933820 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205167. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933820 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG29167_1680015430 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 87.97 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205167 of study SRP200540. sample derived from SAMN11955129 sample name MGG29167_1680015430 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934421 SAMEA112933821 60246 Helicobacter ganmani This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205167. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933821 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG29168_1680015411 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 99.12 completeness software checkM_v1.1 contamination score 0.35 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205167 of study SRP200540. sample derived from SAMN11955129 sample name MGG29168_1680015411 scientific_name Helicobacter ganmani sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934422 SAMEA112933822 179883 uncultured Candidatus Saccharibacteria bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205167. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933822 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG29169_1680015354 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 57.33 completeness software checkM_v1.1 contamination score 0.85 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205167 of study SRP200540. sample derived from SAMN11955129 sample name MGG29169_1680015354 scientific_name uncultured Candidatus Saccharibacteria bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934423 SAMEA112933823 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205167. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933823 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG29170_1680015338 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 67.22 completeness software checkM_v1.1 contamination score 0.69 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205167 of study SRP200540. sample derived from SAMN11955129 sample name MGG29170_1680015338 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934424 SAMEA112933824 59620 uncultured Clostridium sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205167. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933824 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG29171_1680015417 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 94.53 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205167 of study SRP200540. sample derived from SAMN11955129 sample name MGG29171_1680015417 scientific_name uncultured Clostridium sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934425 SAMEA112933825 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205167. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933825 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG29172_1680015360 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 92.51 completeness software checkM_v1.1 contamination score 4.02 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205167 of study SRP200540. sample derived from SAMN11955129 sample name MGG29172_1680015360 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934426 SAMEA112933826 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205167. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933826 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG29173_1680015386 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 96.17 completeness software checkM_v1.1 contamination score 1.35 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205167 of study SRP200540. sample derived from SAMN11955129 sample name MGG29173_1680015386 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934427 SAMEA112933827 167967 uncultured Mycoplasma sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205167. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933827 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG29174_1680015427 assembly quality Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 98.87 completeness software checkM_v1.1 contamination score 0.75 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205167 of study SRP200540. sample derived from SAMN11955129 sample name MGG29174_1680015427 scientific_name uncultured Mycoplasma sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934428 SAMEA112933828 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205167. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933828 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG29175_1680015388 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 65.28 completeness software checkM_v1.1 contamination score 0.94 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205167 of study SRP200540. sample derived from SAMN11955129 sample name MGG29175_1680015388 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934429 SAMEA112933829 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205167. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933829 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG29176_1680015381 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 83.64 completeness software checkM_v1.1 contamination score 2.01 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205167 of study SRP200540. sample derived from SAMN11955129 sample name MGG29176_1680015381 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934430 SAMEA112933830 194843 uncultured Bacteroidales bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205167. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933830 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG29177_1680015434 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 88.57 completeness software checkM_v1.1 contamination score 2.14 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205167 of study SRP200540. sample derived from SAMN11955129 sample name MGG29177_1680015434 scientific_name uncultured Bacteroidales bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934431 SAMEA112933831 2768039 uncultured Duncaniella sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205167. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933831 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG29178_1680015421 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 90.19 completeness software checkM_v1.1 contamination score 1.26 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205167 of study SRP200540. sample derived from SAMN11955129 sample name MGG29178_1680015421 scientific_name uncultured Duncaniella sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934432 SAMEA112933832 1981031 uncultured Mailhella sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205167. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933832 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG29179_1680015402 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 95.86 completeness software checkM_v1.1 contamination score 0.49 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205167 of study SRP200540. sample derived from SAMN11955129 sample name MGG29179_1680015402 scientific_name uncultured Mailhella sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934433 SAMEA112933833 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205167. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933833 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG29180_1680015394 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 79.89 completeness software checkM_v1.1 contamination score 0.51 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205167 of study SRP200540. sample derived from SAMN11955129 sample name MGG29180_1680015394 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934434 SAMEA112933834 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205167. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933834 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG29181_1680015428 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 89.93 completeness software checkM_v1.1 contamination score 2.01 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205167 of study SRP200540. sample derived from SAMN11955129 sample name MGG29181_1680015428 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934435 SAMEA112933835 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205167. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933835 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG29182_1680015362 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 90.94 completeness software checkM_v1.1 contamination score 4.63 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205167 of study SRP200540. sample derived from SAMN11955129 sample name MGG29182_1680015362 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934436 SAMEA112933836 165185 uncultured Eubacterium sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205167. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933836 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG29183_1680015370 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 72.07 completeness software checkM_v1.1 contamination score 3.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205167 of study SRP200540. sample derived from SAMN11955129 sample name MGG29183_1680015370 scientific_name uncultured Eubacterium sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934437 SAMEA112933837 203524 uncultured Eubacteriaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205167. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933837 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG29185_1680015432 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 79.53 completeness software checkM_v1.1 contamination score 1.03 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205167 of study SRP200540. sample derived from SAMN11955129 sample name MGG29185_1680015432 scientific_name uncultured Eubacteriaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934438 SAMEA112933838 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205167. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933838 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG29186_1680015339 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 80.93 completeness software checkM_v1.1 contamination score 0.42 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205167 of study SRP200540. sample derived from SAMN11955129 sample name MGG29186_1680015339 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934439 SAMEA112933839 876091 uncultured Oscillibacter sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205167. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933839 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG29187_1680015416 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 88.53 completeness software checkM_v1.1 contamination score 3.57 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205167 of study SRP200540. sample derived from SAMN11955129 sample name MGG29187_1680015416 scientific_name uncultured Oscillibacter sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934440 SAMEA112933840 1751881 uncultured Hungatella sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205167. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933840 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG29188_1680015390 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 89.78 completeness software checkM_v1.1 contamination score 2.06 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205167 of study SRP200540. sample derived from SAMN11955129 sample name MGG29188_1680015390 scientific_name uncultured Hungatella sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934441 SAMEA112933841 77133 uncultured bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205167. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933841 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29189_1680015405 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 87.47 completeness software checkM_v1.1 contamination score 4.5 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205167 of study SRP200540. sample derived from SAMN11955129 sample name MGG29189_1680015405 scientific_name uncultured bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934442 SAMEA112933842 1622 Ligilactobacillus murinus This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205168. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933842 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29190_1680015378 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 83.7 completeness software checkM_v1.1 contamination score 3.77 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205168 of study SRP200540. sample derived from SAMN11955130 sample name MGG29190_1680015378 scientific_name Ligilactobacillus murinus sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934443 SAMEA112933843 286138 uncultured Dorea sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205168. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933843 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29191_1680015428 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 87.33 completeness software checkM_v1.1 contamination score 1.56 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205168 of study SRP200540. sample derived from SAMN11955130 sample name MGG29191_1680015428 scientific_name uncultured Dorea sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934444 SAMEA112933844 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205168. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933844 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29193_1680015406 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 86.23 completeness software checkM_v1.1 contamination score 0.38 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205168 of study SRP200540. sample derived from SAMN11955130 sample name MGG29193_1680015406 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934445 SAMEA112933845 876416 uncultured Odoribacter sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205168. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933845 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29195_1680015360 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 69.35 completeness software checkM_v1.1 contamination score 1.08 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205168 of study SRP200540. sample derived from SAMN11955130 sample name MGG29195_1680015360 scientific_name uncultured Odoribacter sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934446 SAMEA112933846 76936 Helicobacter typhlonius This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205168. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933846 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29196_1680015394 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 85.34 completeness software checkM_v1.1 contamination score 1.06 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205168 of study SRP200540. sample derived from SAMN11955130 sample name MGG29196_1680015394 scientific_name Helicobacter typhlonius sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934447 SAMEA112933847 286138 uncultured Dorea sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205168. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933847 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29197_1680015415 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 58.48 completeness software checkM_v1.1 contamination score 0.58 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205168 of study SRP200540. sample derived from SAMN11955130 sample name MGG29197_1680015415 scientific_name uncultured Dorea sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934448 SAMEA112933848 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205168. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933848 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29198_1680015338 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 75.46 completeness software checkM_v1.1 contamination score 1.44 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205168 of study SRP200540. sample derived from SAMN11955130 sample name MGG29198_1680015338 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934449 SAMEA112933849 538949 uncultured Alistipes sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205168. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933849 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29199_1680015363 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 99.04 completeness software checkM_v1.1 contamination score 2.64 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205168 of study SRP200540. sample derived from SAMN11955130 sample name MGG29199_1680015363 scientific_name uncultured Alistipes sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934450 SAMEA112933850 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205168. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933850 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29200_1680015396 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 96.86 completeness software checkM_v1.1 contamination score 5.03 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205168 of study SRP200540. sample derived from SAMN11955130 sample name MGG29200_1680015396 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934451 SAMEA112933851 1671927 uncultured Acetatifactor sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205168. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933851 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29201_1680015394 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 97.1 completeness software checkM_v1.1 contamination score 8.54 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205168 of study SRP200540. sample derived from SAMN11955130 sample name MGG29201_1680015394 scientific_name uncultured Acetatifactor sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934452 SAMEA112933852 244328 uncultured Clostridia bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205168. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933852 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29202_1680015407 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 94.94 completeness software checkM_v1.1 contamination score 1.27 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205168 of study SRP200540. sample derived from SAMN11955130 sample name MGG29202_1680015407 scientific_name uncultured Clostridia bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934453 SAMEA112933853 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205168. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933853 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29205_1680015341 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 94.3 completeness software checkM_v1.1 contamination score 3.54 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205168 of study SRP200540. sample derived from SAMN11955130 sample name MGG29205_1680015341 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934454 SAMEA112933854 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205168. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933854 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29206_1680015341 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 78.46 completeness software checkM_v1.1 contamination score 0.17 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205168 of study SRP200540. sample derived from SAMN11955130 sample name MGG29206_1680015341 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934455 SAMEA112933855 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205168. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933855 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29207_1680015413 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 97.89 completeness software checkM_v1.1 contamination score 8.44 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205168 of study SRP200540. sample derived from SAMN11955130 sample name MGG29207_1680015413 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934456 SAMEA112933856 194843 uncultured Bacteroidales bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205168. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933856 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29208_1680015378 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 95.95 completeness software checkM_v1.1 contamination score 0.48 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205168 of study SRP200540. sample derived from SAMN11955130 sample name MGG29208_1680015378 scientific_name uncultured Bacteroidales bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934457 SAMEA112933857 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205168. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933857 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29209_1680015369 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 97.13 completeness software checkM_v1.1 contamination score 2.87 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205168 of study SRP200540. sample derived from SAMN11955130 sample name MGG29209_1680015369 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934458 SAMEA112933858 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205168. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933858 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29210_1680015428 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 94.83 completeness software checkM_v1.1 contamination score 1.69 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205168 of study SRP200540. sample derived from SAMN11955130 sample name MGG29210_1680015428 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934459 SAMEA112933859 1671927 uncultured Acetatifactor sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205168. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933859 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29211_1680015403 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 88.53 completeness software checkM_v1.1 contamination score 1.84 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205168 of study SRP200540. sample derived from SAMN11955130 sample name MGG29211_1680015403 scientific_name uncultured Acetatifactor sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934460 SAMEA112933860 1598 Limosilactobacillus reuteri This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205168. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933860 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29212_1680015345 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 97.81 completeness software checkM_v1.1 contamination score 0.55 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205168 of study SRP200540. sample derived from SAMN11955130 sample name MGG29212_1680015345 scientific_name Limosilactobacillus reuteri sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934461 SAMEA112933861 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205168. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933861 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29213_1680015345 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 56.14 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205168 of study SRP200540. sample derived from SAMN11955130 sample name MGG29213_1680015345 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934462 SAMEA112933862 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205168. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933862 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29214_1680015376 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 93.35 completeness software checkM_v1.1 contamination score 1.9 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205168 of study SRP200540. sample derived from SAMN11955130 sample name MGG29214_1680015376 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934463 SAMEA112933863 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205168. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933863 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29215_1680015400 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 86.72 completeness software checkM_v1.1 contamination score 3.19 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205168 of study SRP200540. sample derived from SAMN11955130 sample name MGG29215_1680015400 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934464 SAMEA112933864 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205168. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933864 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29216_1680015369 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 68.55 completeness software checkM_v1.1 contamination score 0.77 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205168 of study SRP200540. sample derived from SAMN11955130 sample name MGG29216_1680015369 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934465 SAMEA112933865 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205168. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933865 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29217_1680015406 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 55.25 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205168 of study SRP200540. sample derived from SAMN11955130 sample name MGG29217_1680015406 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934466 SAMEA112933866 33959 Lactobacillus johnsonii This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205168. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933866 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29219_1680015437 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 65.53 completeness software checkM_v1.1 contamination score 2.58 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205168 of study SRP200540. sample derived from SAMN11955130 sample name MGG29219_1680015437 scientific_name Lactobacillus johnsonii sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934467 SAMEA112933867 1229255 uncultured Christensenellaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205168. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933867 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29220_1680015407 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 70.07 completeness software checkM_v1.1 contamination score 0.2 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205168 of study SRP200540. sample derived from SAMN11955130 sample name MGG29220_1680015407 scientific_name uncultured Christensenellaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934468 SAMEA112933868 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205168. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933868 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29221_1680015388 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 74.39 completeness software checkM_v1.1 contamination score 0.19 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205168 of study SRP200540. sample derived from SAMN11955130 sample name MGG29221_1680015388 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934469 SAMEA112933869 1229255 uncultured Christensenellaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205168. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933869 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:13Z INSDC last update 2023-04-23T00:20:13Z INSDC status public Submitter Id MGG29222_1680015437 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 80.14 completeness software checkM_v1.1 contamination score 3.63 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205168 of study SRP200540. sample derived from SAMN11955130 sample name MGG29222_1680015437 scientific_name uncultured Christensenellaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934470 SAMEA112933870 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205168. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933870 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:13Z INSDC last update 2023-04-23T00:20:13Z INSDC status public Submitter Id MGG29223_1680015362 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 68.06 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205168 of study SRP200540. sample derived from SAMN11955130 sample name MGG29223_1680015362 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934471 SAMEA112933871 167967 uncultured Mycoplasma sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205168. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933871 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29224_1680015392 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 94.12 completeness software checkM_v1.1 contamination score 1.25 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205168 of study SRP200540. sample derived from SAMN11955130 sample name MGG29224_1680015392 scientific_name uncultured Mycoplasma sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934472 SAMEA112933872 76936 Helicobacter typhlonius This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205169. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933872 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:13Z INSDC last update 2023-04-23T00:20:13Z INSDC status public Submitter Id MGG29225_1680015400 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 99.35 completeness software checkM_v1.1 contamination score 2.3 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205169 of study SRP200540. sample derived from SAMN11955131 sample name MGG29225_1680015400 scientific_name Helicobacter typhlonius sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934473 SAMEA112933873 1751881 uncultured Hungatella sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205169. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933873 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:13Z INSDC last update 2023-04-23T00:20:13Z INSDC status public Submitter Id MGG29226_1680015405 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 68.04 completeness software checkM_v1.1 contamination score 0.79 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205169 of study SRP200540. sample derived from SAMN11955131 sample name MGG29226_1680015405 scientific_name uncultured Hungatella sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934474 SAMEA112933874 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205169. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933874 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:13Z INSDC last update 2023-04-23T00:20:13Z INSDC status public Submitter Id MGG29227_1680015352 assembly quality Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 91.95 completeness software checkM_v1.1 contamination score 2.01 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205169 of study SRP200540. sample derived from SAMN11955131 sample name MGG29227_1680015352 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934475 SAMEA112933875 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205169. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933875 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:13Z INSDC last update 2023-04-23T00:20:13Z INSDC status public Submitter Id MGG29228_1680015350 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 86.91 completeness software checkM_v1.1 contamination score 0.67 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205169 of study SRP200540. sample derived from SAMN11955131 sample name MGG29228_1680015350 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934476 SAMEA112933876 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205169. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933876 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:13Z INSDC last update 2023-04-23T00:20:13Z INSDC status public Submitter Id MGG29229_1680015380 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 60.4 completeness software checkM_v1.1 contamination score 1.33 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205169 of study SRP200540. sample derived from SAMN11955131 sample name MGG29229_1680015380 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934477 SAMEA112933877 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205169. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933877 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:13Z INSDC last update 2023-04-23T00:20:13Z INSDC status public Submitter Id MGG29230_1680015435 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 72.45 completeness software checkM_v1.1 contamination score 2.59 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205169 of study SRP200540. sample derived from SAMN11955131 sample name MGG29230_1680015435 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934478 SAMEA112933878 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205169. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933878 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:13Z INSDC last update 2023-04-23T00:20:13Z INSDC status public Submitter Id MGG29231_1680015376 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 97.3 completeness software checkM_v1.1 contamination score 0.68 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205169 of study SRP200540. sample derived from SAMN11955131 sample name MGG29231_1680015376 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934479 SAMEA112933879 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205169. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933879 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:13Z INSDC last update 2023-04-23T00:20:13Z INSDC status public Submitter Id MGG29232_1680015389 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 95.98 completeness software checkM_v1.1 contamination score 1.07 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205169 of study SRP200540. sample derived from SAMN11955131 sample name MGG29232_1680015389 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934480 SAMEA112933880 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205169. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933880 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:13Z INSDC last update 2023-04-23T00:20:13Z INSDC status public Submitter Id MGG29233_1680015383 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 63.16 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205169 of study SRP200540. sample derived from SAMN11955131 sample name MGG29233_1680015383 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934481 SAMEA112933881 1981031 uncultured Mailhella sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205169. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933881 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:13Z INSDC last update 2023-04-23T00:20:13Z INSDC status public Submitter Id MGG29234_1680015408 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 96.45 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205169 of study SRP200540. sample derived from SAMN11955131 sample name MGG29234_1680015408 scientific_name uncultured Mailhella sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934482 SAMEA112933882 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205169. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933882 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:13Z INSDC last update 2023-04-23T00:20:13Z INSDC status public Submitter Id MGG29235_1680015384 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 94.3 completeness software checkM_v1.1 contamination score 2.01 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205169 of study SRP200540. sample derived from SAMN11955131 sample name MGG29235_1680015384 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934483 SAMEA112933883 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205169. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933883 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:13Z INSDC last update 2023-04-23T00:20:13Z INSDC status public Submitter Id MGG29237_1680015396 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 96.62 completeness software checkM_v1.1 contamination score 0.68 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205169 of study SRP200540. sample derived from SAMN11955131 sample name MGG29237_1680015396 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934484 SAMEA112933884 286138 uncultured Dorea sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205169. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933884 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:13Z INSDC last update 2023-04-23T00:20:13Z INSDC status public Submitter Id MGG29238_1680015372 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 65.2 completeness software checkM_v1.1 contamination score 0.58 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205169 of study SRP200540. sample derived from SAMN11955131 sample name MGG29238_1680015372 scientific_name uncultured Dorea sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934485 SAMEA112933885 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205169. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933885 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:13Z INSDC last update 2023-04-23T00:20:13Z INSDC status public Submitter Id MGG29239_1680015380 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 58.05 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205169 of study SRP200540. sample derived from SAMN11955131 sample name MGG29239_1680015380 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934486 SAMEA112933886 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205169. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933886 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:13Z INSDC last update 2023-04-23T00:20:13Z INSDC status public Submitter Id MGG29240_1680015407 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 71.48 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205169 of study SRP200540. sample derived from SAMN11955131 sample name MGG29240_1680015407 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934487 SAMEA112933887 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205169. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933887 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:13Z INSDC last update 2023-04-23T00:20:13Z INSDC status public Submitter Id MGG29241_1680015410 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 92.03 completeness software checkM_v1.1 contamination score 0.48 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205169 of study SRP200540. sample derived from SAMN11955131 sample name MGG29241_1680015410 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934488 SAMEA112933888 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205169. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933888 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:13Z INSDC last update 2023-04-23T00:20:13Z INSDC status public Submitter Id MGG29243_1680015416 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 57.89 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205169 of study SRP200540. sample derived from SAMN11955131 sample name MGG29243_1680015416 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934489 SAMEA112933889 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205169. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933889 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:13Z INSDC last update 2023-04-23T00:20:13Z INSDC status public Submitter Id MGG29244_1680015437 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 54.36 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205169 of study SRP200540. sample derived from SAMN11955131 sample name MGG29244_1680015437 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934490 SAMEA112933890 244328 uncultured Clostridia bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205169. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933890 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:13Z INSDC last update 2023-04-23T00:20:13Z INSDC status public Submitter Id MGG29245_1680015341 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 97.32 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205169 of study SRP200540. sample derived from SAMN11955131 sample name MGG29245_1680015341 scientific_name uncultured Clostridia bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934491 SAMEA112933891 165185 uncultured Eubacterium sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205169. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933891 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:13Z INSDC last update 2023-04-23T00:20:13Z INSDC status public Submitter Id MGG29246_1680015437 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 78.95 completeness software checkM_v1.1 contamination score 1.75 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205169 of study SRP200540. sample derived from SAMN11955131 sample name MGG29246_1680015437 scientific_name uncultured Eubacterium sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934492 SAMEA112933892 203524 uncultured Eubacteriaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205169. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933892 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:13Z INSDC last update 2023-04-23T00:20:13Z INSDC status public Submitter Id MGG29247_1680015356 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 68.97 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205169 of study SRP200540. sample derived from SAMN11955131 sample name MGG29247_1680015356 scientific_name uncultured Eubacteriaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934493 SAMEA112933893 286138 uncultured Dorea sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205169. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933893 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:13Z INSDC last update 2023-04-23T00:20:13Z INSDC status public Submitter Id MGG29248_1680015372 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 95.81 completeness software checkM_v1.1 contamination score 3.7 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205169 of study SRP200540. sample derived from SAMN11955131 sample name MGG29248_1680015372 scientific_name uncultured Dorea sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934494 SAMEA112933894 167967 uncultured Mycoplasma sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205169. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933894 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:13Z INSDC last update 2023-04-23T00:20:13Z INSDC status public Submitter Id MGG29249_1680015359 assembly quality Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 98.87 completeness software checkM_v1.1 contamination score 0.75 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205169 of study SRP200540. sample derived from SAMN11955131 sample name MGG29249_1680015359 scientific_name uncultured Mycoplasma sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934495 SAMEA112933895 195049 uncultured Clostridiaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205169. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933895 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:13Z INSDC last update 2023-04-23T00:20:13Z INSDC status public Submitter Id MGG29250_1680015436 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 90.77 completeness software checkM_v1.1 contamination score 0.69 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205169 of study SRP200540. sample derived from SAMN11955131 sample name MGG29250_1680015436 scientific_name uncultured Clostridiaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934496 SAMEA112933896 512314 uncultured Roseburia sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205169. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933896 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:13Z INSDC last update 2023-04-23T00:20:13Z INSDC status public Submitter Id MGG29251_1680015358 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 97.52 completeness software checkM_v1.1 contamination score 1.2 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205169 of study SRP200540. sample derived from SAMN11955131 sample name MGG29251_1680015358 scientific_name uncultured Roseburia sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934497 SAMEA112933897 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205169. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933897 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29252_1680015397 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 93.04 completeness software checkM_v1.1 contamination score 1.39 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205169 of study SRP200540. sample derived from SAMN11955131 sample name MGG29252_1680015397 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934498 SAMEA112933898 195049 uncultured Clostridiaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205169. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933898 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29253_1680015401 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 86.29 completeness software checkM_v1.1 contamination score 0.63 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205169 of study SRP200540. sample derived from SAMN11955131 sample name MGG29253_1680015401 scientific_name uncultured Clostridiaceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934499 SAMEA112933899 165185 uncultured Eubacterium sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205169. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933899 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29254_1680015374 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 94.56 completeness software checkM_v1.1 contamination score 1.32 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205169 of study SRP200540. sample derived from SAMN11955131 sample name MGG29254_1680015374 scientific_name uncultured Eubacterium sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934500 SAMEA112933900 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205169. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933900 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29255_1680015355 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 92.68 completeness software checkM_v1.1 contamination score 4.39 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205169 of study SRP200540. sample derived from SAMN11955131 sample name MGG29255_1680015355 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934501 SAMEA112933901 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205169. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933901 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29256_1680015360 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 93.14 completeness software checkM_v1.1 contamination score 1.27 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205169 of study SRP200540. sample derived from SAMN11955131 sample name MGG29256_1680015360 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934502 SAMEA112933902 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205169. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933902 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29257_1680015383 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 85.6 completeness software checkM_v1.1 contamination score 1.68 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205169 of study SRP200540. sample derived from SAMN11955131 sample name MGG29257_1680015383 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934503 SAMEA112933903 1671927 uncultured Acetatifactor sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205169. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933903 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29259_1680015408 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 76.75 completeness software checkM_v1.1 contamination score 2.35 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205169 of study SRP200540. sample derived from SAMN11955131 sample name MGG29259_1680015408 scientific_name uncultured Acetatifactor sp. sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934504 SAMEA112933904 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205169. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933904 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29260_1680015432 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 78.47 completeness software checkM_v1.1 contamination score 3.86 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205169 of study SRP200540. sample derived from SAMN11955131 sample name MGG29260_1680015432 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934505 SAMEA112933905 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205169. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933905 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29261_1680015433 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 62.23 completeness software checkM_v1.1 contamination score 1.68 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205169 of study SRP200540. sample derived from SAMN11955131 sample name MGG29261_1680015433 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934506 SAMEA112933906 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205169. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933906 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29262_1680015406 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 57.86 completeness software checkM_v1.1 contamination score 0.04 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205169 of study SRP200540. sample derived from SAMN11955131 sample name MGG29262_1680015406 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934507 SAMEA112933907 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP200540. This sample represents a Metagenome-assembled genome from the metagenomic run SRR9205169. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933907 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29263_1680015346 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-12-05 completeness score 78.03 completeness software checkM_v1.1 contamination score 1.74 environmental medium Cecum geographic location (country and/or sea) not provided geographic location (latitude) -77.1009 geographic location (longitude) 39.0023 investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9205169 of study SRP200540. sample derived from SAMN11955131 sample name MGG29263_1680015346 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 3000 taxonomic identity marker multi-marker approach ERS14934508 SAMEA112933908 538949 uncultured Alistipes sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334836. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933908 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29265_1680015378 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 97.98 completeness software checkM_v1.1 contamination score 0.16 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334836 of study SRP273833. sample derived from SAMN15656432 sample name MGG29265_1680015378 scientific_name uncultured Alistipes sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934509 SAMEA112933909 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334836. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933909 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29267_1680015410 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 96.13 completeness software checkM_v1.1 contamination score 1.58 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334836 of study SRP273833. sample derived from SAMN15656432 sample name MGG29267_1680015410 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934510 SAMEA112933910 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334836. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933910 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29270_1680015409 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 97.91 completeness software checkM_v1.1 contamination score 1.72 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334836 of study SRP273833. sample derived from SAMN15656432 sample name MGG29270_1680015409 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934511 SAMEA112933911 876416 uncultured Odoribacter sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334836. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933911 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29271_1680015374 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 100 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334836 of study SRP273833. sample derived from SAMN15656432 sample name MGG29271_1680015374 scientific_name uncultured Odoribacter sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934512 SAMEA112933912 77133 uncultured bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334836. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933912 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29272_1680015403 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 87.86 completeness software checkM_v1.1 contamination score 0.85 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334836 of study SRP273833. sample derived from SAMN15656432 sample name MGG29272_1680015403 scientific_name uncultured bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934513 SAMEA112933913 538949 uncultured Alistipes sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334836. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933913 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29273_1680015388 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 74.36 completeness software checkM_v1.1 contamination score 0.48 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334836 of study SRP273833. sample derived from SAMN15656432 sample name MGG29273_1680015388 scientific_name uncultured Alistipes sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934514 SAMEA112933914 348578 uncultured Porphyromonadaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334836. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933914 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29274_1680015386 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 95.16 completeness software checkM_v1.1 contamination score 0.08 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334836 of study SRP273833. sample derived from SAMN15656432 sample name MGG29274_1680015386 scientific_name uncultured Porphyromonadaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934515 SAMEA112933915 194843 uncultured Bacteroidales bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334836. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933915 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29275_1680015425 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 99.52 completeness software checkM_v1.1 contamination score 1.44 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334836 of study SRP273833. sample derived from SAMN15656432 sample name MGG29275_1680015425 scientific_name uncultured Bacteroidales bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934516 SAMEA112933916 194843 uncultured Bacteroidales bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334836. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933916 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29276_1680015391 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 96.92 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334836 of study SRP273833. sample derived from SAMN15656432 sample name MGG29276_1680015391 scientific_name uncultured Bacteroidales bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934517 SAMEA112933917 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334836. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933917 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29278_1680015401 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.3 completeness software checkM_v1.1 contamination score 0.38 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334836 of study SRP273833. sample derived from SAMN15656432 sample name MGG29278_1680015401 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934518 SAMEA112933918 876416 uncultured Odoribacter sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334836. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933918 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29280_1680015435 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 97.49 completeness software checkM_v1.1 contamination score 0.9 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334836 of study SRP273833. sample derived from SAMN15656432 sample name MGG29280_1680015435 scientific_name uncultured Odoribacter sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934519 SAMEA112933919 159272 uncultured Prevotella sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334836. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933919 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29281_1680015395 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.52 completeness software checkM_v1.1 contamination score 0.74 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334836 of study SRP273833. sample derived from SAMN15656432 sample name MGG29281_1680015395 scientific_name uncultured Prevotella sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934520 SAMEA112933920 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334836. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933920 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29282_1680015377 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.32 completeness software checkM_v1.1 contamination score 1.68 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334836 of study SRP273833. sample derived from SAMN15656432 sample name MGG29282_1680015377 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934521 SAMEA112933921 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334836. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933921 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29283_1680015360 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 91.21 completeness software checkM_v1.1 contamination score 1.34 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334836 of study SRP273833. sample derived from SAMN15656432 sample name MGG29283_1680015360 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934522 SAMEA112933922 1796646 Muribaculum intestinale This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334836. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933922 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29284_1680015384 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 97.55 completeness software checkM_v1.1 contamination score 0.38 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334836 of study SRP273833. sample derived from SAMN15656432 sample name MGG29284_1680015384 scientific_name Muribaculum intestinale sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934523 SAMEA112933923 1796652 Turicimonas muris This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334836. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933923 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29285_1680015396 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 95.78 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334836 of study SRP273833. sample derived from SAMN15656432 sample name MGG29285_1680015396 scientific_name Turicimonas muris sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934524 SAMEA112933924 162156 uncultured Bacteroides sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334836. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933924 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:10Z INSDC last update 2023-04-23T00:20:10Z INSDC status public Submitter Id MGG29286_1680015372 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 96.85 completeness software checkM_v1.1 contamination score 1.16 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334836 of study SRP273833. sample derived from SAMN15656432 sample name MGG29286_1680015372 scientific_name uncultured Bacteroides sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934525 SAMEA112933925 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334836. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933925 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG29287_1680015416 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 95.54 completeness software checkM_v1.1 contamination score 0.38 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334836 of study SRP273833. sample derived from SAMN15656432 sample name MGG29287_1680015416 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934526 SAMEA112933926 348578 uncultured Porphyromonadaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334836. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933926 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG29288_1680015370 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 95.24 completeness software checkM_v1.1 contamination score 0.38 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334836 of study SRP273833. sample derived from SAMN15656432 sample name MGG29288_1680015370 scientific_name uncultured Porphyromonadaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934527 SAMEA112933927 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334836. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933927 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG29289_1680015434 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 96.79 completeness software checkM_v1.1 contamination score 0.94 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334836 of study SRP273833. sample derived from SAMN15656432 sample name MGG29289_1680015434 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934528 SAMEA112933928 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334836. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933928 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG29290_1680015397 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 96.64 completeness software checkM_v1.1 contamination score 0.38 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334836 of study SRP273833. sample derived from SAMN15656432 sample name MGG29290_1680015397 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934529 SAMEA112933929 1671927 uncultured Acetatifactor sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334836. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933929 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG29291_1680015350 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 91.57 completeness software checkM_v1.1 contamination score 5.87 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334836 of study SRP273833. sample derived from SAMN15656432 sample name MGG29291_1680015350 scientific_name uncultured Acetatifactor sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934530 SAMEA112933930 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334836. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933930 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG29292_1680015347 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 82.25 completeness software checkM_v1.1 contamination score 0.83 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334836 of study SRP273833. sample derived from SAMN15656432 sample name MGG29292_1680015347 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934531 SAMEA112933931 1905347 uncultured Ruthenibacterium sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334836. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933931 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG29293_1680015390 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 94.21 completeness software checkM_v1.1 contamination score 0.34 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334836 of study SRP273833. sample derived from SAMN15656432 sample name MGG29293_1680015390 scientific_name uncultured Ruthenibacterium sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934532 SAMEA112933932 2682970 uncultured Candidatus Melainabacteria bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334836. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933932 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG29294_1680015407 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 83.11 completeness software checkM_v1.1 contamination score 2.85 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334836 of study SRP273833. sample derived from SAMN15656432 sample name MGG29294_1680015407 scientific_name uncultured Candidatus Melainabacteria bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934533 SAMEA112933933 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334836. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933933 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG29295_1680015376 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 87.99 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334836 of study SRP273833. sample derived from SAMN15656432 sample name MGG29295_1680015376 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934534 SAMEA112933934 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334836. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933934 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG29296_1680015430 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 90.08 completeness software checkM_v1.1 contamination score 1.99 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334836 of study SRP273833. sample derived from SAMN15656432 sample name MGG29296_1680015430 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934535 SAMEA112933935 538949 uncultured Alistipes sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334836. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933935 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG29297_1680015384 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 83.22 completeness software checkM_v1.1 contamination score 0.54 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334836 of study SRP273833. sample derived from SAMN15656432 sample name MGG29297_1680015384 scientific_name uncultured Alistipes sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934536 SAMEA112933936 1766256 uncultured Agathobacter sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334836. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933936 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG29298_1680015428 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 79.26 completeness software checkM_v1.1 contamination score 0.85 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334836 of study SRP273833. sample derived from SAMN15656432 sample name MGG29298_1680015428 scientific_name uncultured Agathobacter sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934537 SAMEA112933937 59620 uncultured Clostridium sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334836. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933937 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG29299_1680015417 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 67.23 completeness software checkM_v1.1 contamination score 0.36 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334836 of study SRP273833. sample derived from SAMN15656432 sample name MGG29299_1680015417 scientific_name uncultured Clostridium sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934538 SAMEA112933938 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334836. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933938 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG29300_1680015435 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 83.66 completeness software checkM_v1.1 contamination score 0.24 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334836 of study SRP273833. sample derived from SAMN15656432 sample name MGG29300_1680015435 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934539 SAMEA112933939 1981031 uncultured Mailhella sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334835. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933939 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG29301_1680015400 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.22 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334835 of study SRP273833. sample derived from SAMN15656433 sample name MGG29301_1680015400 scientific_name uncultured Mailhella sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934540 SAMEA112933940 194843 uncultured Bacteroidales bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334835. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933940 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG29302_1680015370 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 97.6 completeness software checkM_v1.1 contamination score 0.48 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334835 of study SRP273833. sample derived from SAMN15656433 sample name MGG29302_1680015370 scientific_name uncultured Bacteroidales bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934541 SAMEA112933941 538949 uncultured Alistipes sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334835. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933941 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG29303_1680015345 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.56 completeness software checkM_v1.1 contamination score 0.16 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334835 of study SRP273833. sample derived from SAMN15656433 sample name MGG29303_1680015345 scientific_name uncultured Alistipes sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934542 SAMEA112933942 538949 uncultured Alistipes sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334835. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933942 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG29304_1680015379 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 94.95 completeness software checkM_v1.1 contamination score 2.02 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334835 of study SRP273833. sample derived from SAMN15656433 sample name MGG29304_1680015379 scientific_name uncultured Alistipes sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934543 SAMEA112933943 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334835. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933943 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG29305_1680015399 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 95.98 completeness software checkM_v1.1 contamination score 1.72 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334835 of study SRP273833. sample derived from SAMN15656433 sample name MGG29305_1680015399 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934544 SAMEA112933944 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334835. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933944 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG29307_1680015432 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 96.55 completeness software checkM_v1.1 contamination score 1.15 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334835 of study SRP273833. sample derived from SAMN15656433 sample name MGG29307_1680015432 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934545 SAMEA112933945 239935 Akkermansia muciniphila This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334835. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933945 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:11Z INSDC last update 2023-04-23T00:20:11Z INSDC status public Submitter Id MGG29308_1680015397 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 96.6 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334835 of study SRP273833. sample derived from SAMN15656433 sample name MGG29308_1680015397 scientific_name Akkermansia muciniphila sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934546 SAMEA112933946 77133 uncultured bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334835. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933946 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29309_1680015358 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 51.71 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334835 of study SRP273833. sample derived from SAMN15656433 sample name MGG29309_1680015358 scientific_name uncultured bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934547 SAMEA112933947 1796646 Muribaculum intestinale This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334835. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933947 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29311_1680015396 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 96.04 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334835 of study SRP273833. sample derived from SAMN15656433 sample name MGG29311_1680015396 scientific_name Muribaculum intestinale sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934548 SAMEA112933948 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334835. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933948 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29312_1680015341 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 94.15 completeness software checkM_v1.1 contamination score 0.38 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334835 of study SRP273833. sample derived from SAMN15656433 sample name MGG29312_1680015341 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934549 SAMEA112933949 876416 uncultured Odoribacter sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334835. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933949 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T00:20:12Z INSDC last update 2023-04-23T00:20:12Z INSDC status public Submitter Id MGG29313_1680015407 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 94.35 completeness software checkM_v1.1 contamination score 1.02 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334835 of study SRP273833. sample derived from SAMN15656433 sample name MGG29313_1680015407 scientific_name uncultured Odoribacter sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934550 SAMEA112933950 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334835. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933950 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29314_1680015388 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.66 completeness software checkM_v1.1 contamination score 1.85 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334835 of study SRP273833. sample derived from SAMN15656433 sample name MGG29314_1680015388 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934551 SAMEA112933951 162156 uncultured Bacteroides sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334835. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933951 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29315_1680015360 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 54.09 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334835 of study SRP273833. sample derived from SAMN15656433 sample name MGG29315_1680015360 scientific_name uncultured Bacteroides sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934552 SAMEA112933952 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334835. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933952 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29316_1680015425 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 95.09 completeness software checkM_v1.1 contamination score 2.01 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334835 of study SRP273833. sample derived from SAMN15656433 sample name MGG29316_1680015425 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934553 SAMEA112933953 348578 uncultured Porphyromonadaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334835. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933953 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29317_1680015360 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 93.41 completeness software checkM_v1.1 contamination score 0.38 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334835 of study SRP273833. sample derived from SAMN15656433 sample name MGG29317_1680015360 scientific_name uncultured Porphyromonadaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934554 SAMEA112933954 1766256 uncultured Agathobacter sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334835. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933954 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29319_1680015398 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 97.57 completeness software checkM_v1.1 contamination score 1.71 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334835 of study SRP273833. sample derived from SAMN15656433 sample name MGG29319_1680015398 scientific_name uncultured Agathobacter sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934555 SAMEA112933955 194843 uncultured Bacteroidales bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334835. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933955 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29320_1680015377 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 58.93 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334835 of study SRP273833. sample derived from SAMN15656433 sample name MGG29320_1680015377 scientific_name uncultured Bacteroidales bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934556 SAMEA112933956 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334835. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933956 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29321_1680015432 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 96.31 completeness software checkM_v1.1 contamination score 0.19 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334835 of study SRP273833. sample derived from SAMN15656433 sample name MGG29321_1680015432 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934557 SAMEA112933957 91750 uncultured Alphaproteobacteria bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334835. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933957 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29323_1680015409 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 85.16 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334835 of study SRP273833. sample derived from SAMN15656433 sample name MGG29323_1680015409 scientific_name uncultured Alphaproteobacteria bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934558 SAMEA112933958 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334835. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933958 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29324_1680015357 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 90.21 completeness software checkM_v1.1 contamination score 4.04 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334835 of study SRP273833. sample derived from SAMN15656433 sample name MGG29324_1680015357 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934559 SAMEA112933959 165185 uncultured Eubacterium sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334835. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933959 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29325_1680015388 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 88.35 completeness software checkM_v1.1 contamination score 2.16 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334835 of study SRP273833. sample derived from SAMN15656433 sample name MGG29325_1680015388 scientific_name uncultured Eubacterium sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934560 SAMEA112933960 1796652 Turicimonas muris This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334835. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933960 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29327_1680015410 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 77.56 completeness software checkM_v1.1 contamination score 0.62 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334835 of study SRP273833. sample derived from SAMN15656433 sample name MGG29327_1680015410 scientific_name Turicimonas muris sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934561 SAMEA112933961 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334835. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933961 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T12:27:36Z INSDC last update 2023-04-23T12:27:36Z INSDC status public Submitter Id MGG29328_1680015349 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 69.51 completeness software checkM_v1.1 contamination score 0.56 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334835 of study SRP273833. sample derived from SAMN15656433 sample name MGG29328_1680015349 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934562 SAMEA112933962 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334834. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933962 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29329_1680015410 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.16 completeness software checkM_v1.1 contamination score 2.59 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334834 of study SRP273833. sample derived from SAMN15656434 sample name MGG29329_1680015410 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934563 SAMEA112933963 538949 uncultured Alistipes sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334834. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933963 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29330_1680015376 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 88.05 completeness software checkM_v1.1 contamination score 0.48 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334834 of study SRP273833. sample derived from SAMN15656434 sample name MGG29330_1680015376 scientific_name uncultured Alistipes sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934564 SAMEA112933964 538949 uncultured Alistipes sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334834. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933964 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29331_1680015417 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 94.71 completeness software checkM_v1.1 contamination score 0.16 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334834 of study SRP273833. sample derived from SAMN15656434 sample name MGG29331_1680015417 scientific_name uncultured Alistipes sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934565 SAMEA112933965 538949 uncultured Alistipes sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334834. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933965 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29335_1680015347 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 94.89 completeness software checkM_v1.1 contamination score 0.48 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334834 of study SRP273833. sample derived from SAMN15656434 sample name MGG29335_1680015347 scientific_name uncultured Alistipes sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934566 SAMEA112933966 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334834. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933966 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29338_1680015422 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 97.33 completeness software checkM_v1.1 contamination score 1.92 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334834 of study SRP273833. sample derived from SAMN15656434 sample name MGG29338_1680015422 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934567 SAMEA112933967 348578 uncultured Porphyromonadaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334834. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933967 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29339_1680015345 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 94.91 completeness software checkM_v1.1 contamination score 0.02 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334834 of study SRP273833. sample derived from SAMN15656434 sample name MGG29339_1680015345 scientific_name uncultured Porphyromonadaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934568 SAMEA112933968 194843 uncultured Bacteroidales bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334834. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933968 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29340_1680015384 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 94.62 completeness software checkM_v1.1 contamination score 0.48 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334834 of study SRP273833. sample derived from SAMN15656434 sample name MGG29340_1680015384 scientific_name uncultured Bacteroidales bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934569 SAMEA112933969 1796646 Muribaculum intestinale This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334834. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933969 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29341_1680015363 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 96.03 completeness software checkM_v1.1 contamination score 1.51 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334834 of study SRP273833. sample derived from SAMN15656434 sample name MGG29341_1680015363 scientific_name Muribaculum intestinale sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934570 SAMEA112933970 159272 uncultured Prevotella sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334834. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933970 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29342_1680015378 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 92.78 completeness software checkM_v1.1 contamination score 0.37 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334834 of study SRP273833. sample derived from SAMN15656434 sample name MGG29342_1680015378 scientific_name uncultured Prevotella sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934571 SAMEA112933971 876416 uncultured Odoribacter sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334834. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933971 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29343_1680015367 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.92 completeness software checkM_v1.1 contamination score 0.94 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334834 of study SRP273833. sample derived from SAMN15656434 sample name MGG29343_1680015367 scientific_name uncultured Odoribacter sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934572 SAMEA112933972 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334834. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933972 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29345_1680015434 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 95.05 completeness software checkM_v1.1 contamination score 0.94 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334834 of study SRP273833. sample derived from SAMN15656434 sample name MGG29345_1680015434 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934573 SAMEA112933973 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334834. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933973 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29346_1680015387 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 97.82 completeness software checkM_v1.1 contamination score 0.67 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334834 of study SRP273833. sample derived from SAMN15656434 sample name MGG29346_1680015387 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934574 SAMEA112933974 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334834. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933974 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29347_1680015345 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 91.82 completeness software checkM_v1.1 contamination score 0.69 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334834 of study SRP273833. sample derived from SAMN15656434 sample name MGG29347_1680015345 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934575 SAMEA112933975 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334834. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933975 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29348_1680015396 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 93.62 completeness software checkM_v1.1 contamination score 1.46 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334834 of study SRP273833. sample derived from SAMN15656434 sample name MGG29348_1680015396 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934576 SAMEA112933976 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334834. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933976 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29349_1680015398 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 78.42 completeness software checkM_v1.1 contamination score 0.24 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334834 of study SRP273833. sample derived from SAMN15656434 sample name MGG29349_1680015398 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934577 SAMEA112933977 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334834. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933977 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29351_1680015377 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 71.32 completeness software checkM_v1.1 contamination score 0.44 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334834 of study SRP273833. sample derived from SAMN15656434 sample name MGG29351_1680015377 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934578 SAMEA112933978 1905347 uncultured Ruthenibacterium sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334834. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933978 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29352_1680015371 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 77.01 completeness software checkM_v1.1 contamination score 0.68 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334834 of study SRP273833. sample derived from SAMN15656434 sample name MGG29352_1680015371 scientific_name uncultured Ruthenibacterium sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934579 SAMEA112933979 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334834. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933979 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29353_1680015436 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 71.38 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334834 of study SRP273833. sample derived from SAMN15656434 sample name MGG29353_1680015436 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934580 SAMEA112933980 244328 uncultured Clostridia bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334834. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933980 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29354_1680015375 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 62.13 completeness software checkM_v1.1 contamination score 0.92 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334834 of study SRP273833. sample derived from SAMN15656434 sample name MGG29354_1680015375 scientific_name uncultured Clostridia bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934581 SAMEA112933981 1981031 uncultured Mailhella sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334833. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933981 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29357_1680015401 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.22 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334833 of study SRP273833. sample derived from SAMN15656435 sample name MGG29357_1680015401 scientific_name uncultured Mailhella sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934582 SAMEA112933982 77133 uncultured bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334833. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933982 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29358_1680015389 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 88.89 completeness software checkM_v1.1 contamination score 1.28 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334833 of study SRP273833. sample derived from SAMN15656435 sample name MGG29358_1680015389 scientific_name uncultured bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934583 SAMEA112933983 538949 uncultured Alistipes sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334833. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933983 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29360_1680015379 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 100 completeness software checkM_v1.1 contamination score 0.5 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334833 of study SRP273833. sample derived from SAMN15656435 sample name MGG29360_1680015379 scientific_name uncultured Alistipes sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934584 SAMEA112933984 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334833. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933984 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29363_1680015422 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 96.96 completeness software checkM_v1.1 contamination score 0.68 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334833 of study SRP273833. sample derived from SAMN15656435 sample name MGG29363_1680015422 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934585 SAMEA112933985 91750 uncultured Alphaproteobacteria bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334833. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933985 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29364_1680015413 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 86.81 completeness software checkM_v1.1 contamination score 4.4 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334833 of study SRP273833. sample derived from SAMN15656435 sample name MGG29364_1680015413 scientific_name uncultured Alphaproteobacteria bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934586 SAMEA112933986 1229255 uncultured Christensenellaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334833. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933986 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29365_1680015356 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 95.16 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334833 of study SRP273833. sample derived from SAMN15656435 sample name MGG29365_1680015356 scientific_name uncultured Christensenellaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934587 SAMEA112933987 1905347 uncultured Ruthenibacterium sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334833. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933987 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29366_1680015343 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 93.18 completeness software checkM_v1.1 contamination score 0.68 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334833 of study SRP273833. sample derived from SAMN15656435 sample name MGG29366_1680015343 scientific_name uncultured Ruthenibacterium sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934588 SAMEA112933988 538949 uncultured Alistipes sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334833. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933988 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29367_1680015411 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.46 completeness software checkM_v1.1 contamination score 1.78 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334833 of study SRP273833. sample derived from SAMN15656435 sample name MGG29367_1680015411 scientific_name uncultured Alistipes sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934589 SAMEA112933989 876416 uncultured Odoribacter sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334833. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933989 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29368_1680015387 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 96.77 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334833 of study SRP273833. sample derived from SAMN15656435 sample name MGG29368_1680015387 scientific_name uncultured Odoribacter sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934590 SAMEA112933990 538949 uncultured Alistipes sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334833. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933990 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29369_1680015402 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.56 completeness software checkM_v1.1 contamination score 0.16 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334833 of study SRP273833. sample derived from SAMN15656435 sample name MGG29369_1680015402 scientific_name uncultured Alistipes sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934591 SAMEA112933991 328812 Parabacteroides goldsteinii This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334833. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933991 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29370_1680015414 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 99.62 completeness software checkM_v1.1 contamination score 0.19 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334833 of study SRP273833. sample derived from SAMN15656435 sample name MGG29370_1680015414 scientific_name Parabacteroides goldsteinii sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934592 SAMEA112933992 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334833. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933992 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29371_1680015414 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 96.25 completeness software checkM_v1.1 contamination score 1.15 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334833 of study SRP273833. sample derived from SAMN15656435 sample name MGG29371_1680015414 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934593 SAMEA112933993 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334833. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933993 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29372_1680015430 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 99.33 completeness software checkM_v1.1 contamination score 0.34 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334833 of study SRP273833. sample derived from SAMN15656435 sample name MGG29372_1680015430 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934594 SAMEA112933994 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334833. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933994 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29373_1680015408 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 95.98 completeness software checkM_v1.1 contamination score 0.57 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334833 of study SRP273833. sample derived from SAMN15656435 sample name MGG29373_1680015408 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934595 SAMEA112933995 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334833. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933995 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:06Z INSDC last update 2023-04-23T08:23:06Z INSDC status public Submitter Id MGG29374_1680015357 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 96.97 completeness software checkM_v1.1 contamination score 1.44 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334833 of study SRP273833. sample derived from SAMN15656435 sample name MGG29374_1680015357 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934596 SAMEA112933996 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334833. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933996 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:06Z INSDC last update 2023-04-23T08:23:06Z INSDC status public Submitter Id MGG29375_1680015378 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 97.52 completeness software checkM_v1.1 contamination score 1.44 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334833 of study SRP273833. sample derived from SAMN15656435 sample name MGG29375_1680015378 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934597 SAMEA112933997 165185 uncultured Eubacterium sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334833. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933997 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:06Z INSDC last update 2023-04-23T08:23:06Z INSDC status public Submitter Id MGG29376_1680015436 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.16 completeness software checkM_v1.1 contamination score 3.69 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334833 of study SRP273833. sample derived from SAMN15656435 sample name MGG29376_1680015436 scientific_name uncultured Eubacterium sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934598 SAMEA112933998 348578 uncultured Porphyromonadaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334833. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933998 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:06Z INSDC last update 2023-04-23T08:23:06Z INSDC status public Submitter Id MGG29378_1680015356 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 79.81 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334833 of study SRP273833. sample derived from SAMN15656435 sample name MGG29378_1680015356 scientific_name uncultured Porphyromonadaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934599 SAMEA112933999 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334833. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112933999 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:06Z INSDC last update 2023-04-23T08:23:06Z INSDC status public Submitter Id MGG29380_1680015388 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 94.18 completeness software checkM_v1.1 contamination score 2.01 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334833 of study SRP273833. sample derived from SAMN15656435 sample name MGG29380_1680015388 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934600 SAMEA112934000 876416 uncultured Odoribacter sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334833. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934000 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:06Z INSDC last update 2023-04-23T08:23:06Z INSDC status public Submitter Id MGG29382_1680015400 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.92 completeness software checkM_v1.1 contamination score 0.54 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334833 of study SRP273833. sample derived from SAMN15656435 sample name MGG29382_1680015400 scientific_name uncultured Odoribacter sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934601 SAMEA112934001 91750 uncultured Alphaproteobacteria bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334833. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934001 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:06Z INSDC last update 2023-04-23T08:23:06Z INSDC status public Submitter Id MGG29383_1680015361 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 95.7 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334833 of study SRP273833. sample derived from SAMN15656435 sample name MGG29383_1680015361 scientific_name uncultured Alphaproteobacteria bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934602 SAMEA112934002 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334833. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934002 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:06Z INSDC last update 2023-04-23T08:23:06Z INSDC status public Submitter Id MGG29384_1680015380 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 90.23 completeness software checkM_v1.1 contamination score 0.5 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334833 of study SRP273833. sample derived from SAMN15656435 sample name MGG29384_1680015380 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934603 SAMEA112934003 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334833. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934003 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:06Z INSDC last update 2023-04-23T08:23:06Z INSDC status public Submitter Id MGG29385_1680015395 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 92.95 completeness software checkM_v1.1 contamination score 0.94 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334833 of study SRP273833. sample derived from SAMN15656435 sample name MGG29385_1680015395 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934604 SAMEA112934004 1229255 uncultured Christensenellaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334833. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934004 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:06Z INSDC last update 2023-04-23T08:23:06Z INSDC status public Submitter Id MGG29386_1680015433 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 87.1 completeness software checkM_v1.1 contamination score 0.03 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334833 of study SRP273833. sample derived from SAMN15656435 sample name MGG29386_1680015433 scientific_name uncultured Christensenellaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934605 SAMEA112934005 194843 uncultured Bacteroidales bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334833. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934005 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:06Z INSDC last update 2023-04-23T08:23:06Z INSDC status public Submitter Id MGG29387_1680015360 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 62.14 completeness software checkM_v1.1 contamination score 0.75 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334833 of study SRP273833. sample derived from SAMN15656435 sample name MGG29387_1680015360 scientific_name uncultured Bacteroidales bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934606 SAMEA112934006 1796652 Turicimonas muris This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334833. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934006 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:06Z INSDC last update 2023-04-23T08:23:06Z INSDC status public Submitter Id MGG29388_1680015404 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.75 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334833 of study SRP273833. sample derived from SAMN15656435 sample name MGG29388_1680015404 scientific_name Turicimonas muris sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934607 SAMEA112934007 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334833. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934007 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:06Z INSDC last update 2023-04-23T08:23:06Z INSDC status public Submitter Id MGG29389_1680015383 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 96.98 completeness software checkM_v1.1 contamination score 1.34 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334833 of study SRP273833. sample derived from SAMN15656435 sample name MGG29389_1680015383 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934608 SAMEA112934008 194843 uncultured Bacteroidales bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334833. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934008 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:06Z INSDC last update 2023-04-23T08:23:06Z INSDC status public Submitter Id MGG29390_1680015435 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 99.42 completeness software checkM_v1.1 contamination score 1.76 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334833 of study SRP273833. sample derived from SAMN15656435 sample name MGG29390_1680015435 scientific_name uncultured Bacteroidales bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934609 SAMEA112934009 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334833. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934009 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29391_1680015389 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 96.34 completeness software checkM_v1.1 contamination score 0.75 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334833 of study SRP273833. sample derived from SAMN15656435 sample name MGG29391_1680015389 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934610 SAMEA112934010 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334833. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934010 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29394_1680015363 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 97.99 completeness software checkM_v1.1 contamination score 0.89 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334833 of study SRP273833. sample derived from SAMN15656435 sample name MGG29394_1680015363 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934611 SAMEA112934011 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334833. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934011 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29395_1680015435 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 96.18 completeness software checkM_v1.1 contamination score 2.59 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334833 of study SRP273833. sample derived from SAMN15656435 sample name MGG29395_1680015435 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934612 SAMEA112934012 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334833. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934012 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29396_1680015341 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 79.25 completeness software checkM_v1.1 contamination score 0.67 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334833 of study SRP273833. sample derived from SAMN15656435 sample name MGG29396_1680015341 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934613 SAMEA112934013 348578 uncultured Porphyromonadaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334833. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934013 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29397_1680015372 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 97.15 completeness software checkM_v1.1 contamination score 0.38 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334833 of study SRP273833. sample derived from SAMN15656435 sample name MGG29397_1680015372 scientific_name uncultured Porphyromonadaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934614 SAMEA112934014 2768039 uncultured Duncaniella sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334833. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934014 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29398_1680015337 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 93.9 completeness software checkM_v1.1 contamination score 0.75 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334833 of study SRP273833. sample derived from SAMN15656435 sample name MGG29398_1680015337 scientific_name uncultured Duncaniella sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934615 SAMEA112934015 538949 uncultured Alistipes sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334833. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934015 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29399_1680015342 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 91.29 completeness software checkM_v1.1 contamination score 0.72 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334833 of study SRP273833. sample derived from SAMN15656435 sample name MGG29399_1680015342 scientific_name uncultured Alistipes sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934616 SAMEA112934016 512314 uncultured Roseburia sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334833. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934016 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29400_1680015417 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 93.5 completeness software checkM_v1.1 contamination score 3.45 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334833 of study SRP273833. sample derived from SAMN15656435 sample name MGG29400_1680015417 scientific_name uncultured Roseburia sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934617 SAMEA112934017 195049 uncultured Clostridiaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334833. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934017 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29402_1680015401 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 70.99 completeness software checkM_v1.1 contamination score 2.97 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334833 of study SRP273833. sample derived from SAMN15656435 sample name MGG29402_1680015401 scientific_name uncultured Clostridiaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934618 SAMEA112934018 244328 uncultured Clostridia bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334833. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934018 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29403_1680015337 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 65.99 completeness software checkM_v1.1 contamination score 2.71 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334833 of study SRP273833. sample derived from SAMN15656435 sample name MGG29403_1680015337 scientific_name uncultured Clostridia bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934619 SAMEA112934019 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334833. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934019 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29404_1680015397 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 82.48 completeness software checkM_v1.1 contamination score 0.19 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334833 of study SRP273833. sample derived from SAMN15656435 sample name MGG29404_1680015397 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934620 SAMEA112934020 329911 uncultured Peptococcaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334833. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934020 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29405_1680015380 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 71.04 completeness software checkM_v1.1 contamination score 0.09 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334833 of study SRP273833. sample derived from SAMN15656435 sample name MGG29405_1680015380 scientific_name uncultured Peptococcaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934621 SAMEA112934021 538949 uncultured Alistipes sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334832. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934021 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29407_1680015397 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 99.52 completeness software checkM_v1.1 contamination score 0.48 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334832 of study SRP273833. sample derived from SAMN15656436 sample name MGG29407_1680015397 scientific_name uncultured Alistipes sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934622 SAMEA112934022 538949 uncultured Alistipes sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334832. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934022 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29411_1680015417 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 94.95 completeness software checkM_v1.1 contamination score 0.16 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334832 of study SRP273833. sample derived from SAMN15656436 sample name MGG29411_1680015417 scientific_name uncultured Alistipes sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934623 SAMEA112934023 1905347 uncultured Ruthenibacterium sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334832. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934023 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29412_1680015364 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 89.42 completeness software checkM_v1.1 contamination score 0.68 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334832 of study SRP273833. sample derived from SAMN15656436 sample name MGG29412_1680015364 scientific_name uncultured Ruthenibacterium sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934624 SAMEA112934024 348578 uncultured Porphyromonadaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334832. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934024 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29413_1680015353 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 92.64 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334832 of study SRP273833. sample derived from SAMN15656436 sample name MGG29413_1680015353 scientific_name uncultured Porphyromonadaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934625 SAMEA112934025 1796646 Muribaculum intestinale This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334832. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934025 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29414_1680015396 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.68 completeness software checkM_v1.1 contamination score 0.75 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334832 of study SRP273833. sample derived from SAMN15656436 sample name MGG29414_1680015396 scientific_name Muribaculum intestinale sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934626 SAMEA112934026 194843 uncultured Bacteroidales bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334832. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934026 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29415_1680015356 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 63.08 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334832 of study SRP273833. sample derived from SAMN15656436 sample name MGG29415_1680015356 scientific_name uncultured Bacteroidales bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934627 SAMEA112934027 194843 uncultured Bacteroidales bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334832. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934027 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29416_1680015368 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.08 completeness software checkM_v1.1 contamination score 0.48 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334832 of study SRP273833. sample derived from SAMN15656436 sample name MGG29416_1680015368 scientific_name uncultured Bacteroidales bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934628 SAMEA112934028 876416 uncultured Odoribacter sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334832. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934028 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29417_1680015378 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 94.87 completeness software checkM_v1.1 contamination score 1.08 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334832 of study SRP273833. sample derived from SAMN15656436 sample name MGG29417_1680015378 scientific_name uncultured Odoribacter sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934629 SAMEA112934029 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334832. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934029 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29418_1680015340 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 92.96 completeness software checkM_v1.1 contamination score 0.57 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334832 of study SRP273833. sample derived from SAMN15656436 sample name MGG29418_1680015340 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934630 SAMEA112934030 538949 uncultured Alistipes sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334832. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934030 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29419_1680015416 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 71.33 completeness software checkM_v1.1 contamination score 0.96 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334832 of study SRP273833. sample derived from SAMN15656436 sample name MGG29419_1680015416 scientific_name uncultured Alistipes sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934631 SAMEA112934031 348578 uncultured Porphyromonadaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334832. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934031 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29420_1680015422 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 82.5 completeness software checkM_v1.1 contamination score 0.94 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334832 of study SRP273833. sample derived from SAMN15656436 sample name MGG29420_1680015422 scientific_name uncultured Porphyromonadaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934632 SAMEA112934032 876416 uncultured Odoribacter sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334832. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934032 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29421_1680015352 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 80.13 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334832 of study SRP273833. sample derived from SAMN15656436 sample name MGG29421_1680015352 scientific_name uncultured Odoribacter sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934633 SAMEA112934033 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334832. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934033 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29422_1680015397 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 75.15 completeness software checkM_v1.1 contamination score 0.34 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334832 of study SRP273833. sample derived from SAMN15656436 sample name MGG29422_1680015397 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934634 SAMEA112934034 77133 uncultured bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334832. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934034 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29423_1680015338 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 75.56 completeness software checkM_v1.1 contamination score 1.28 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334832 of study SRP273833. sample derived from SAMN15656436 sample name MGG29423_1680015338 scientific_name uncultured bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934635 SAMEA112934035 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334832. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934035 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29424_1680015378 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 73.56 completeness software checkM_v1.1 contamination score 2.98 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334832 of study SRP273833. sample derived from SAMN15656436 sample name MGG29424_1680015378 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934636 SAMEA112934036 538949 uncultured Alistipes sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334831. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934036 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29426_1680015421 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 100 completeness software checkM_v1.1 contamination score 0.48 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334831 of study SRP273833. sample derived from SAMN15656437 sample name MGG29426_1680015421 scientific_name uncultured Alistipes sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934637 SAMEA112934037 538949 uncultured Alistipes sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334831. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934037 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29427_1680015382 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.56 completeness software checkM_v1.1 contamination score 0.64 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334831 of study SRP273833. sample derived from SAMN15656437 sample name MGG29427_1680015382 scientific_name uncultured Alistipes sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934638 SAMEA112934038 538949 uncultured Alistipes sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334831. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934038 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29428_1680015410 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 96.54 completeness software checkM_v1.1 contamination score 3.88 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334831 of study SRP273833. sample derived from SAMN15656437 sample name MGG29428_1680015410 scientific_name uncultured Alistipes sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934639 SAMEA112934039 1981031 uncultured Mailhella sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334831. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934039 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29430_1680015376 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.22 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334831 of study SRP273833. sample derived from SAMN15656437 sample name MGG29430_1680015376 scientific_name uncultured Mailhella sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934640 SAMEA112934040 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334831. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934040 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29432_1680015403 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 97.97 completeness software checkM_v1.1 contamination score 1.13 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334831 of study SRP273833. sample derived from SAMN15656437 sample name MGG29432_1680015403 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934641 SAMEA112934041 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334831. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934041 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29433_1680015372 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.85 completeness software checkM_v1.1 contamination score 2.01 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334831 of study SRP273833. sample derived from SAMN15656437 sample name MGG29433_1680015372 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934642 SAMEA112934042 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334831. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934042 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29435_1680015360 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 88.51 completeness software checkM_v1.1 contamination score 0.65 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334831 of study SRP273833. sample derived from SAMN15656437 sample name MGG29435_1680015360 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934643 SAMEA112934043 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334831. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934043 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29436_1680015373 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 97.91 completeness software checkM_v1.1 contamination score 1.83 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334831 of study SRP273833. sample derived from SAMN15656437 sample name MGG29436_1680015373 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934644 SAMEA112934044 286138 uncultured Dorea sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334831. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934044 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29437_1680015351 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 93.0 completeness software checkM_v1.1 contamination score 0.19 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334831 of study SRP273833. sample derived from SAMN15656437 sample name MGG29437_1680015351 scientific_name uncultured Dorea sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934645 SAMEA112934045 876416 uncultured Odoribacter sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334831. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934045 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29438_1680015388 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 96.77 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334831 of study SRP273833. sample derived from SAMN15656437 sample name MGG29438_1680015388 scientific_name uncultured Odoribacter sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934646 SAMEA112934046 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334831. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934046 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29439_1680015400 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 95.95 completeness software checkM_v1.1 contamination score 2.26 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334831 of study SRP273833. sample derived from SAMN15656437 sample name MGG29439_1680015400 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934647 SAMEA112934047 194843 uncultured Bacteroidales bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334831. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934047 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29440_1680015389 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 57.74 completeness software checkM_v1.1 contamination score 0.09 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334831 of study SRP273833. sample derived from SAMN15656437 sample name MGG29440_1680015389 scientific_name uncultured Bacteroidales bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934648 SAMEA112934048 876416 uncultured Odoribacter sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334831. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934048 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29441_1680015358 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 99.19 completeness software checkM_v1.1 contamination score 0.54 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334831 of study SRP273833. sample derived from SAMN15656437 sample name MGG29441_1680015358 scientific_name uncultured Odoribacter sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934649 SAMEA112934049 1766256 uncultured Agathobacter sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334831. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934049 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29443_1680015343 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 97.28 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334831 of study SRP273833. sample derived from SAMN15656437 sample name MGG29443_1680015343 scientific_name uncultured Agathobacter sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934650 SAMEA112934050 348578 uncultured Porphyromonadaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334831. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934050 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29444_1680015364 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 90.1 completeness software checkM_v1.1 contamination score 0.38 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334831 of study SRP273833. sample derived from SAMN15656437 sample name MGG29444_1680015364 scientific_name uncultured Porphyromonadaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934651 SAMEA112934051 348578 uncultured Porphyromonadaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334831. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934051 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29445_1680015423 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 94.38 completeness software checkM_v1.1 contamination score 0.38 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334831 of study SRP273833. sample derived from SAMN15656437 sample name MGG29445_1680015423 scientific_name uncultured Porphyromonadaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934652 SAMEA112934052 1751881 uncultured Hungatella sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334831. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934052 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29446_1680015347 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 94.28 completeness software checkM_v1.1 contamination score 1.9 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334831 of study SRP273833. sample derived from SAMN15656437 sample name MGG29446_1680015347 scientific_name uncultured Hungatella sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934653 SAMEA112934053 1905347 uncultured Ruthenibacterium sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334831. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934053 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29447_1680015393 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 91.62 completeness software checkM_v1.1 contamination score 0.51 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334831 of study SRP273833. sample derived from SAMN15656437 sample name MGG29447_1680015393 scientific_name uncultured Ruthenibacterium sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934654 SAMEA112934054 77133 uncultured bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334831. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934054 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29448_1680015356 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 82.26 completeness software checkM_v1.1 contamination score 0.85 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334831 of study SRP273833. sample derived from SAMN15656437 sample name MGG29448_1680015356 scientific_name uncultured bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934655 SAMEA112934055 1796646 Muribaculum intestinale This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334831. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934055 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29449_1680015352 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 83.96 completeness software checkM_v1.1 contamination score 0.85 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334831 of study SRP273833. sample derived from SAMN15656437 sample name MGG29449_1680015352 scientific_name Muribaculum intestinale sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934656 SAMEA112934056 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334831. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934056 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29450_1680015424 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 64.08 completeness software checkM_v1.1 contamination score 1.7 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334831 of study SRP273833. sample derived from SAMN15656437 sample name MGG29450_1680015424 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934657 SAMEA112934057 538949 uncultured Alistipes sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334831. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934057 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29451_1680015337 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 69.23 completeness software checkM_v1.1 contamination score 0.32 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334831 of study SRP273833. sample derived from SAMN15656437 sample name MGG29451_1680015337 scientific_name uncultured Alistipes sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934658 SAMEA112934058 876091 uncultured Oscillibacter sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334831. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934058 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29452_1680015428 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 79.32 completeness software checkM_v1.1 contamination score 0.67 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334831 of study SRP273833. sample derived from SAMN15656437 sample name MGG29452_1680015428 scientific_name uncultured Oscillibacter sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934659 SAMEA112934059 538949 uncultured Alistipes sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334829. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934059 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29454_1680015371 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 92.95 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334829 of study SRP273833. sample derived from SAMN15656438 sample name MGG29454_1680015371 scientific_name uncultured Alistipes sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934660 SAMEA112934060 1981031 uncultured Mailhella sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334829. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934060 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29456_1680015420 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.22 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334829 of study SRP273833. sample derived from SAMN15656438 sample name MGG29456_1680015420 scientific_name uncultured Mailhella sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934661 SAMEA112934061 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334829. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934061 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29457_1680015384 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 97.91 completeness software checkM_v1.1 contamination score 1.83 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334829 of study SRP273833. sample derived from SAMN15656438 sample name MGG29457_1680015384 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934662 SAMEA112934062 538949 uncultured Alistipes sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334829. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934062 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29458_1680015360 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 99.52 completeness software checkM_v1.1 contamination score 0.96 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334829 of study SRP273833. sample derived from SAMN15656438 sample name MGG29458_1680015360 scientific_name uncultured Alistipes sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934663 SAMEA112934063 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334829. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934063 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29459_1680015338 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 93.56 completeness software checkM_v1.1 contamination score 2.59 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334829 of study SRP273833. sample derived from SAMN15656438 sample name MGG29459_1680015338 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934664 SAMEA112934064 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334829. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934064 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29460_1680015389 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 96.64 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334829 of study SRP273833. sample derived from SAMN15656438 sample name MGG29460_1680015389 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934665 SAMEA112934065 538949 uncultured Alistipes sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334829. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934065 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29461_1680015358 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 95.58 completeness software checkM_v1.1 contamination score 0.72 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334829 of study SRP273833. sample derived from SAMN15656438 sample name MGG29461_1680015358 scientific_name uncultured Alistipes sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934666 SAMEA112934066 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334829. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934066 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29462_1680015384 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.64 completeness software checkM_v1.1 contamination score 1.15 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334829 of study SRP273833. sample derived from SAMN15656438 sample name MGG29462_1680015384 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934667 SAMEA112934067 159272 uncultured Prevotella sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334829. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934067 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29463_1680015420 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.33 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334829 of study SRP273833. sample derived from SAMN15656438 sample name MGG29463_1680015420 scientific_name uncultured Prevotella sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934668 SAMEA112934068 194843 uncultured Bacteroidales bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334829. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934068 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29464_1680015366 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 56.01 completeness software checkM_v1.1 contamination score 0.09 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334829 of study SRP273833. sample derived from SAMN15656438 sample name MGG29464_1680015366 scientific_name uncultured Bacteroidales bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934669 SAMEA112934069 348578 uncultured Porphyromonadaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334829. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934069 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29465_1680015367 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 95.28 completeness software checkM_v1.1 contamination score 0.77 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334829 of study SRP273833. sample derived from SAMN15656438 sample name MGG29465_1680015367 scientific_name uncultured Porphyromonadaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934670 SAMEA112934070 1796646 Muribaculum intestinale This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334829. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934070 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29466_1680015362 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 93.84 completeness software checkM_v1.1 contamination score 0.38 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334829 of study SRP273833. sample derived from SAMN15656438 sample name MGG29466_1680015362 scientific_name Muribaculum intestinale sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934671 SAMEA112934071 194843 uncultured Bacteroidales bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334829. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934071 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29467_1680015385 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.46 completeness software checkM_v1.1 contamination score 0.48 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334829 of study SRP273833. sample derived from SAMN15656438 sample name MGG29467_1680015385 scientific_name uncultured Bacteroidales bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934672 SAMEA112934072 194843 uncultured Bacteroidales bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334829. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934072 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29468_1680015373 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 58.93 completeness software checkM_v1.1 contamination score 0.57 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334829 of study SRP273833. sample derived from SAMN15656438 sample name MGG29468_1680015373 scientific_name uncultured Bacteroidales bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934673 SAMEA112934073 876416 uncultured Odoribacter sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334829. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934073 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29469_1680015388 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 96.58 completeness software checkM_v1.1 contamination score 1.79 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334829 of study SRP273833. sample derived from SAMN15656438 sample name MGG29469_1680015388 scientific_name uncultured Odoribacter sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934674 SAMEA112934074 1766256 uncultured Agathobacter sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334829. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934074 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29471_1680015342 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 97.2 completeness software checkM_v1.1 contamination score 0.16 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334829 of study SRP273833. sample derived from SAMN15656438 sample name MGG29471_1680015342 scientific_name uncultured Agathobacter sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934675 SAMEA112934075 59620 uncultured Clostridium sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334829. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934075 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T12:27:36Z INSDC last update 2023-04-23T12:27:36Z INSDC status public Submitter Id MGG29472_1680015339 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 73.83 completeness software checkM_v1.1 contamination score 4.66 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334829 of study SRP273833. sample derived from SAMN15656438 sample name MGG29472_1680015339 scientific_name uncultured Clostridium sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934676 SAMEA112934076 77133 uncultured bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334829. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934076 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29474_1680015374 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 78.23 completeness software checkM_v1.1 contamination score 0.85 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334829 of study SRP273833. sample derived from SAMN15656438 sample name MGG29474_1680015374 scientific_name uncultured bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934677 SAMEA112934077 1545742 uncultured Christensenella sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334829. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934077 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29475_1680015375 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 73.01 completeness software checkM_v1.1 contamination score 0.22 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334829 of study SRP273833. sample derived from SAMN15656438 sample name MGG29475_1680015375 scientific_name uncultured Christensenella sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934678 SAMEA112934078 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334828. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934078 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29476_1680015411 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.16 completeness software checkM_v1.1 contamination score 2.3 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334828 of study SRP273833. sample derived from SAMN15656439 sample name MGG29476_1680015411 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934679 SAMEA112934079 1981031 uncultured Mailhella sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334828. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934079 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29477_1680015391 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.22 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334828 of study SRP273833. sample derived from SAMN15656439 sample name MGG29477_1680015391 scientific_name uncultured Mailhella sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934680 SAMEA112934080 538949 uncultured Alistipes sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334828. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934080 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29478_1680015410 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.99 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334828 of study SRP273833. sample derived from SAMN15656439 sample name MGG29478_1680015410 scientific_name uncultured Alistipes sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934681 SAMEA112934081 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334828. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934081 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29479_1680015346 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 94.37 completeness software checkM_v1.1 contamination score 1.81 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334828 of study SRP273833. sample derived from SAMN15656439 sample name MGG29479_1680015346 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934682 SAMEA112934082 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334828. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934082 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29480_1680015393 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.28 completeness software checkM_v1.1 contamination score 2.35 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334828 of study SRP273833. sample derived from SAMN15656439 sample name MGG29480_1680015393 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934683 SAMEA112934083 876416 uncultured Odoribacter sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334828. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934083 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29481_1680015436 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 99.46 completeness software checkM_v1.1 contamination score 0.54 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334828 of study SRP273833. sample derived from SAMN15656439 sample name MGG29481_1680015436 scientific_name uncultured Odoribacter sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934684 SAMEA112934084 538949 uncultured Alistipes sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334828. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934084 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29482_1680015437 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 55.62 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334828 of study SRP273833. sample derived from SAMN15656439 sample name MGG29482_1680015437 scientific_name uncultured Alistipes sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934685 SAMEA112934085 194843 uncultured Bacteroidales bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334828. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934085 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29484_1680015344 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 94.48 completeness software checkM_v1.1 contamination score 1.92 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334828 of study SRP273833. sample derived from SAMN15656439 sample name MGG29484_1680015344 scientific_name uncultured Bacteroidales bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934686 SAMEA112934086 239935 Akkermansia muciniphila This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334828. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934086 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29485_1680015427 assembly quality Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 92.94 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334828 of study SRP273833. sample derived from SAMN15656439 sample name MGG29485_1680015427 scientific_name Akkermansia muciniphila sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934687 SAMEA112934087 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334828. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934087 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29487_1680015437 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 90.58 completeness software checkM_v1.1 contamination score 3.02 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334828 of study SRP273833. sample derived from SAMN15656439 sample name MGG29487_1680015437 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934688 SAMEA112934088 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334828. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934088 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29488_1680015370 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 76.76 completeness software checkM_v1.1 contamination score 0.63 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334828 of study SRP273833. sample derived from SAMN15656439 sample name MGG29488_1680015370 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934689 SAMEA112934089 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334828. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934089 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29489_1680015395 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 70.56 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334828 of study SRP273833. sample derived from SAMN15656439 sample name MGG29489_1680015395 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934690 SAMEA112934090 244328 uncultured Clostridia bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334828. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934090 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29490_1680015362 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 77.09 completeness software checkM_v1.1 contamination score 0.65 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334828 of study SRP273833. sample derived from SAMN15656439 sample name MGG29490_1680015362 scientific_name uncultured Clostridia bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934691 SAMEA112934091 876416 uncultured Odoribacter sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334828. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934091 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29491_1680015428 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 59.87 completeness software checkM_v1.1 contamination score 0.0 environmental medium Cecum geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334828 of study SRP273833. sample derived from SAMN15656439 sample name MGG29491_1680015428 scientific_name uncultured Odoribacter sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934692 SAMEA112934092 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334823. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934092 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29493_1680015357 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 93.68 completeness software checkM_v1.1 contamination score 1.15 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334823 of study SRP273833. sample derived from SAMN15648792 sample name MGG29493_1680015357 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934693 SAMEA112934093 538949 uncultured Alistipes sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334823. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934093 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29494_1680015432 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.08 completeness software checkM_v1.1 contamination score 0.16 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334823 of study SRP273833. sample derived from SAMN15648792 sample name MGG29494_1680015432 scientific_name uncultured Alistipes sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934694 SAMEA112934094 538949 uncultured Alistipes sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334823. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934094 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29495_1680015340 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 99.52 completeness software checkM_v1.1 contamination score 1.44 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334823 of study SRP273833. sample derived from SAMN15648792 sample name MGG29495_1680015340 scientific_name uncultured Alistipes sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934695 SAMEA112934095 1981031 uncultured Mailhella sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334823. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934095 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29496_1680015381 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.22 completeness software checkM_v1.1 contamination score 0.0 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334823 of study SRP273833. sample derived from SAMN15648792 sample name MGG29496_1680015381 scientific_name uncultured Mailhella sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934696 SAMEA112934096 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334823. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934096 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29497_1680015414 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 97.97 completeness software checkM_v1.1 contamination score 1.01 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334823 of study SRP273833. sample derived from SAMN15648792 sample name MGG29497_1680015414 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934697 SAMEA112934097 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334823. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934097 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29498_1680015360 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 86.46 completeness software checkM_v1.1 contamination score 0.42 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334823 of study SRP273833. sample derived from SAMN15648792 sample name MGG29498_1680015360 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934698 SAMEA112934098 876416 uncultured Odoribacter sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334823. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934098 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29499_1680015394 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 99.46 completeness software checkM_v1.1 contamination score 0.0 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334823 of study SRP273833. sample derived from SAMN15648792 sample name MGG29499_1680015394 scientific_name uncultured Odoribacter sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934699 SAMEA112934099 239935 Akkermansia muciniphila This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334823. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934099 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29500_1680015350 assembly quality Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 97.96 completeness software checkM_v1.1 contamination score 0.0 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334823 of study SRP273833. sample derived from SAMN15648792 sample name MGG29500_1680015350 scientific_name Akkermansia muciniphila sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934700 SAMEA112934100 538949 uncultured Alistipes sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334823. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934100 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29502_1680015399 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 97.1 completeness software checkM_v1.1 contamination score 0.96 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334823 of study SRP273833. sample derived from SAMN15648792 sample name MGG29502_1680015399 scientific_name uncultured Alistipes sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934701 SAMEA112934101 348578 uncultured Porphyromonadaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334823. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934101 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29503_1680015410 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 97.36 completeness software checkM_v1.1 contamination score 0.08 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334823 of study SRP273833. sample derived from SAMN15648792 sample name MGG29503_1680015410 scientific_name uncultured Porphyromonadaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934702 SAMEA112934102 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334823. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934102 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29504_1680015425 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.68 completeness software checkM_v1.1 contamination score 0.75 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334823 of study SRP273833. sample derived from SAMN15648792 sample name MGG29504_1680015425 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934703 SAMEA112934103 1766256 uncultured Agathobacter sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334823. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934103 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29505_1680015391 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 99.21 completeness software checkM_v1.1 contamination score 1.13 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334823 of study SRP273833. sample derived from SAMN15648792 sample name MGG29505_1680015391 scientific_name uncultured Agathobacter sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934704 SAMEA112934104 194843 uncultured Bacteroidales bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334823. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934104 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29506_1680015398 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.62 completeness software checkM_v1.1 contamination score 0.48 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334823 of study SRP273833. sample derived from SAMN15648792 sample name MGG29506_1680015398 scientific_name uncultured Bacteroidales bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934705 SAMEA112934105 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334823. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934105 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29507_1680015393 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 97.92 completeness software checkM_v1.1 contamination score 0.0 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334823 of study SRP273833. sample derived from SAMN15648792 sample name MGG29507_1680015393 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934706 SAMEA112934106 1796646 Muribaculum intestinale This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334823. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934106 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29508_1680015362 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 96.79 completeness software checkM_v1.1 contamination score 0.0 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334823 of study SRP273833. sample derived from SAMN15648792 sample name MGG29508_1680015362 scientific_name Muribaculum intestinale sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934707 SAMEA112934107 159272 uncultured Prevotella sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334823. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934107 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29509_1680015368 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 99.44 completeness software checkM_v1.1 contamination score 0.0 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334823 of study SRP273833. sample derived from SAMN15648792 sample name MGG29509_1680015368 scientific_name uncultured Prevotella sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934708 SAMEA112934108 194843 uncultured Bacteroidales bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334823. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934108 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29510_1680015419 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 82.14 completeness software checkM_v1.1 contamination score 0.38 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334823 of study SRP273833. sample derived from SAMN15648792 sample name MGG29510_1680015419 scientific_name uncultured Bacteroidales bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934709 SAMEA112934109 163362 uncultured Bacteroidaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334823. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934109 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29511_1680015344 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 96.81 completeness software checkM_v1.1 contamination score 1.05 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334823 of study SRP273833. sample derived from SAMN15648792 sample name MGG29511_1680015344 scientific_name uncultured Bacteroidaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934710 SAMEA112934110 876416 uncultured Odoribacter sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334823. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934110 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29512_1680015406 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.39 completeness software checkM_v1.1 contamination score 0.54 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334823 of study SRP273833. sample derived from SAMN15648792 sample name MGG29512_1680015406 scientific_name uncultured Odoribacter sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934711 SAMEA112934111 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334823. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934111 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29513_1680015394 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 97.23 completeness software checkM_v1.1 contamination score 0.38 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334823 of study SRP273833. sample derived from SAMN15648792 sample name MGG29513_1680015394 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934712 SAMEA112934112 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334823. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934112 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29514_1680015426 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.66 completeness software checkM_v1.1 contamination score 1.68 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334823 of study SRP273833. sample derived from SAMN15648792 sample name MGG29514_1680015426 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934713 SAMEA112934113 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334823. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934113 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29515_1680015423 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.67 completeness software checkM_v1.1 contamination score 0.69 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334823 of study SRP273833. sample derived from SAMN15648792 sample name MGG29515_1680015423 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934714 SAMEA112934114 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334823. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934114 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29516_1680015405 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 97.59 completeness software checkM_v1.1 contamination score 2.59 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334823 of study SRP273833. sample derived from SAMN15648792 sample name MGG29516_1680015405 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934715 SAMEA112934115 1796652 Turicimonas muris This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334823. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934115 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29517_1680015405 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.75 completeness software checkM_v1.1 contamination score 0.0 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334823 of study SRP273833. sample derived from SAMN15648792 sample name MGG29517_1680015405 scientific_name Turicimonas muris sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934716 SAMEA112934116 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334823. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934116 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29518_1680015374 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 96.79 completeness software checkM_v1.1 contamination score 0.38 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334823 of study SRP273833. sample derived from SAMN15648792 sample name MGG29518_1680015374 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934717 SAMEA112934117 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334823. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934117 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29519_1680015390 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 90.5 completeness software checkM_v1.1 contamination score 2.41 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334823 of study SRP273833. sample derived from SAMN15648792 sample name MGG29519_1680015390 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934718 SAMEA112934118 162156 uncultured Bacteroides sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334823. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934118 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29520_1680015351 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 68.1 completeness software checkM_v1.1 contamination score 0.37 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334823 of study SRP273833. sample derived from SAMN15648792 sample name MGG29520_1680015351 scientific_name uncultured Bacteroides sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934719 SAMEA112934119 348578 uncultured Porphyromonadaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334823. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934119 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T12:27:36Z INSDC last update 2023-04-23T12:27:36Z INSDC status public Submitter Id MGG29521_1680015406 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 96.79 completeness software checkM_v1.1 contamination score 0.38 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334823 of study SRP273833. sample derived from SAMN15648792 sample name MGG29521_1680015406 scientific_name uncultured Porphyromonadaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934720 SAMEA112934120 244328 uncultured Clostridia bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334823. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934120 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29522_1680015400 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 76.56 completeness software checkM_v1.1 contamination score 4.27 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334823 of study SRP273833. sample derived from SAMN15648792 sample name MGG29522_1680015400 scientific_name uncultured Clostridia bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934721 SAMEA112934121 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334823. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934121 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29523_1680015381 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.3 completeness software checkM_v1.1 contamination score 0.85 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334823 of study SRP273833. sample derived from SAMN15648792 sample name MGG29523_1680015381 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934722 SAMEA112934122 244328 uncultured Clostridia bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334823. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934122 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29524_1680015432 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 77.13 completeness software checkM_v1.1 contamination score 0.7 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334823 of study SRP273833. sample derived from SAMN15648792 sample name MGG29524_1680015432 scientific_name uncultured Clostridia bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934723 SAMEA112934123 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334823. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934123 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29525_1680015394 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 96.55 completeness software checkM_v1.1 contamination score 0.57 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334823 of study SRP273833. sample derived from SAMN15648792 sample name MGG29525_1680015394 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934724 SAMEA112934124 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334823. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934124 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29526_1680015351 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 97.92 completeness software checkM_v1.1 contamination score 0.4 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334823 of study SRP273833. sample derived from SAMN15648792 sample name MGG29526_1680015351 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934725 SAMEA112934125 77133 uncultured bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334823. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934125 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29527_1680015425 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 86.32 completeness software checkM_v1.1 contamination score 1.37 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334823 of study SRP273833. sample derived from SAMN15648792 sample name MGG29527_1680015425 scientific_name uncultured bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934726 SAMEA112934126 2768039 uncultured Duncaniella sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334823. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934126 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29528_1680015422 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 95.29 completeness software checkM_v1.1 contamination score 0.75 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334823 of study SRP273833. sample derived from SAMN15648792 sample name MGG29528_1680015422 scientific_name uncultured Duncaniella sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934727 SAMEA112934127 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334823. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934127 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29529_1680015391 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 96.08 completeness software checkM_v1.1 contamination score 0.75 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334823 of study SRP273833. sample derived from SAMN15648792 sample name MGG29529_1680015391 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934728 SAMEA112934128 1905347 uncultured Ruthenibacterium sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334823. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934128 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29530_1680015390 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 95.12 completeness software checkM_v1.1 contamination score 0.0 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334823 of study SRP273833. sample derived from SAMN15648792 sample name MGG29530_1680015390 scientific_name uncultured Ruthenibacterium sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934729 SAMEA112934129 1751881 uncultured Hungatella sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334823. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934129 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29531_1680015370 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 89.27 completeness software checkM_v1.1 contamination score 0.63 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334823 of study SRP273833. sample derived from SAMN15648792 sample name MGG29531_1680015370 scientific_name uncultured Hungatella sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934730 SAMEA112934130 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334823. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934130 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29532_1680015413 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 73.3 completeness software checkM_v1.1 contamination score 0.67 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334823 of study SRP273833. sample derived from SAMN15648792 sample name MGG29532_1680015413 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934731 SAMEA112934131 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334823. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934131 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29533_1680015410 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 74.1 completeness software checkM_v1.1 contamination score 2.86 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334823 of study SRP273833. sample derived from SAMN15648792 sample name MGG29533_1680015410 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934732 SAMEA112934132 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334822. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934132 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T12:27:36Z INSDC last update 2023-04-23T12:27:36Z INSDC status public Submitter Id MGG29535_1680015436 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 95.98 completeness software checkM_v1.1 contamination score 1.72 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334822 of study SRP273833. sample derived from SAMN15648793 sample name MGG29535_1680015436 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934733 SAMEA112934133 538949 uncultured Alistipes sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334822. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934133 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29537_1680015436 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 99.52 completeness software checkM_v1.1 contamination score 0.48 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334822 of study SRP273833. sample derived from SAMN15648793 sample name MGG29537_1680015436 scientific_name uncultured Alistipes sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934734 SAMEA112934134 1981031 uncultured Mailhella sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334822. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934134 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29538_1680015418 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.22 completeness software checkM_v1.1 contamination score 0.0 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334822 of study SRP273833. sample derived from SAMN15648793 sample name MGG29538_1680015418 scientific_name uncultured Mailhella sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934735 SAMEA112934135 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334822. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934135 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29539_1680015337 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 94.83 completeness software checkM_v1.1 contamination score 1.44 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334822 of study SRP273833. sample derived from SAMN15648793 sample name MGG29539_1680015337 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934736 SAMEA112934136 286138 uncultured Dorea sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334822. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934136 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29540_1680015359 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 78.65 completeness software checkM_v1.1 contamination score 1.21 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334822 of study SRP273833. sample derived from SAMN15648793 sample name MGG29540_1680015359 scientific_name uncultured Dorea sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934737 SAMEA112934137 77133 uncultured bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334822. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934137 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29541_1680015417 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 88.89 completeness software checkM_v1.1 contamination score 0.85 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334822 of study SRP273833. sample derived from SAMN15648793 sample name MGG29541_1680015417 scientific_name uncultured bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934738 SAMEA112934138 328812 Parabacteroides goldsteinii This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334822. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934138 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29542_1680015392 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 99.23 completeness software checkM_v1.1 contamination score 0.19 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334822 of study SRP273833. sample derived from SAMN15648793 sample name MGG29542_1680015392 scientific_name Parabacteroides goldsteinii sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934739 SAMEA112934139 538949 uncultured Alistipes sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334822. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934139 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29543_1680015378 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 97.6 completeness software checkM_v1.1 contamination score 1.12 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334822 of study SRP273833. sample derived from SAMN15648793 sample name MGG29543_1680015378 scientific_name uncultured Alistipes sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934740 SAMEA112934140 91750 uncultured Alphaproteobacteria bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334822. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934140 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29544_1680015382 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 86.81 completeness software checkM_v1.1 contamination score 1.1 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334822 of study SRP273833. sample derived from SAMN15648793 sample name MGG29544_1680015382 scientific_name uncultured Alphaproteobacteria bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934741 SAMEA112934141 348578 uncultured Porphyromonadaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334822. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934141 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29545_1680015382 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 96.23 completeness software checkM_v1.1 contamination score 0.0 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334822 of study SRP273833. sample derived from SAMN15648793 sample name MGG29545_1680015382 scientific_name uncultured Porphyromonadaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934742 SAMEA112934142 159272 uncultured Prevotella sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334822. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934142 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29546_1680015387 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 60.37 completeness software checkM_v1.1 contamination score 0.0 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334822 of study SRP273833. sample derived from SAMN15648793 sample name MGG29546_1680015387 scientific_name uncultured Prevotella sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934743 SAMEA112934143 1796646 Muribaculum intestinale This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334822. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934143 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29547_1680015345 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 97.55 completeness software checkM_v1.1 contamination score 0.0 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334822 of study SRP273833. sample derived from SAMN15648793 sample name MGG29547_1680015345 scientific_name Muribaculum intestinale sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934744 SAMEA112934144 194843 uncultured Bacteroidales bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334822. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934144 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29548_1680015435 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.81 completeness software checkM_v1.1 contamination score 1.89 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334822 of study SRP273833. sample derived from SAMN15648793 sample name MGG29548_1680015435 scientific_name uncultured Bacteroidales bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934745 SAMEA112934145 194843 uncultured Bacteroidales bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334822. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934145 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29550_1680015384 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 51.25 completeness software checkM_v1.1 contamination score 0.09 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334822 of study SRP273833. sample derived from SAMN15648793 sample name MGG29550_1680015384 scientific_name uncultured Bacteroidales bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934746 SAMEA112934146 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334822. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934146 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29551_1680015422 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 95.67 completeness software checkM_v1.1 contamination score 1.98 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334822 of study SRP273833. sample derived from SAMN15648793 sample name MGG29551_1680015422 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934747 SAMEA112934147 538949 uncultured Alistipes sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334822. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934147 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29552_1680015403 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 96.57 completeness software checkM_v1.1 contamination score 4.09 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334822 of study SRP273833. sample derived from SAMN15648793 sample name MGG29552_1680015403 scientific_name uncultured Alistipes sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934748 SAMEA112934148 876416 uncultured Odoribacter sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334822. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934148 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29553_1680015418 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 99.46 completeness software checkM_v1.1 contamination score 0.54 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334822 of study SRP273833. sample derived from SAMN15648793 sample name MGG29553_1680015418 scientific_name uncultured Odoribacter sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934749 SAMEA112934149 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334822. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934149 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29554_1680015347 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 95.85 completeness software checkM_v1.1 contamination score 0.0 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334822 of study SRP273833. sample derived from SAMN15648793 sample name MGG29554_1680015347 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934750 SAMEA112934150 162156 uncultured Bacteroides sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334822. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934150 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29555_1680015426 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 96.1 completeness software checkM_v1.1 contamination score 0.0 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334822 of study SRP273833. sample derived from SAMN15648793 sample name MGG29555_1680015426 scientific_name uncultured Bacteroides sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934751 SAMEA112934151 1796652 Turicimonas muris This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334822. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934151 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29556_1680015338 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.75 completeness software checkM_v1.1 contamination score 0.0 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334822 of study SRP273833. sample derived from SAMN15648793 sample name MGG29556_1680015338 scientific_name Turicimonas muris sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934752 SAMEA112934152 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334822. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934152 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29557_1680015353 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 95.21 completeness software checkM_v1.1 contamination score 2.75 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334822 of study SRP273833. sample derived from SAMN15648793 sample name MGG29557_1680015353 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934753 SAMEA112934153 876416 uncultured Odoribacter sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334822. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934153 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29558_1680015366 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.8 completeness software checkM_v1.1 contamination score 0.0 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334822 of study SRP273833. sample derived from SAMN15648793 sample name MGG29558_1680015366 scientific_name uncultured Odoribacter sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934754 SAMEA112934154 194843 uncultured Bacteroidales bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334822. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934154 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29559_1680015404 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 65.35 completeness software checkM_v1.1 contamination score 0.38 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334822 of study SRP273833. sample derived from SAMN15648793 sample name MGG29559_1680015404 scientific_name uncultured Bacteroidales bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934755 SAMEA112934155 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334822. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934155 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29560_1680015370 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.3 completeness software checkM_v1.1 contamination score 0.75 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334822 of study SRP273833. sample derived from SAMN15648793 sample name MGG29560_1680015370 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934756 SAMEA112934156 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334822. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934156 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29562_1680015387 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 96.79 completeness software checkM_v1.1 contamination score 0.75 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334822 of study SRP273833. sample derived from SAMN15648793 sample name MGG29562_1680015387 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934757 SAMEA112934157 538949 uncultured Alistipes sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334822. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934157 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29563_1680015434 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 91.41 completeness software checkM_v1.1 contamination score 0.64 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334822 of study SRP273833. sample derived from SAMN15648793 sample name MGG29563_1680015434 scientific_name uncultured Alistipes sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934758 SAMEA112934158 194843 uncultured Bacteroidales bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334822. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934158 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29564_1680015380 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 52.56 completeness software checkM_v1.1 contamination score 0.48 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334822 of study SRP273833. sample derived from SAMN15648793 sample name MGG29564_1680015380 scientific_name uncultured Bacteroidales bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934759 SAMEA112934159 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334822. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934159 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29565_1680015391 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 92.59 completeness software checkM_v1.1 contamination score 1.51 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334822 of study SRP273833. sample derived from SAMN15648793 sample name MGG29565_1680015391 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934760 SAMEA112934160 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334822. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934160 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29566_1680015360 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 93.76 completeness software checkM_v1.1 contamination score 1.15 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334822 of study SRP273833. sample derived from SAMN15648793 sample name MGG29566_1680015360 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934761 SAMEA112934161 348578 uncultured Porphyromonadaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334822. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934161 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29567_1680015430 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 93.41 completeness software checkM_v1.1 contamination score 0.75 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334822 of study SRP273833. sample derived from SAMN15648793 sample name MGG29567_1680015430 scientific_name uncultured Porphyromonadaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934762 SAMEA112934162 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334822. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934162 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29568_1680015434 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 92.46 completeness software checkM_v1.1 contamination score 0.51 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334822 of study SRP273833. sample derived from SAMN15648793 sample name MGG29568_1680015434 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934763 SAMEA112934163 59620 uncultured Clostridium sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334822. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934163 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29569_1680015431 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 74.43 completeness software checkM_v1.1 contamination score 4.03 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334822 of study SRP273833. sample derived from SAMN15648793 sample name MGG29569_1680015431 scientific_name uncultured Clostridium sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934764 SAMEA112934164 195049 uncultured Clostridiaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334822. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934164 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29570_1680015392 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 70.72 completeness software checkM_v1.1 contamination score 1.64 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334822 of study SRP273833. sample derived from SAMN15648793 sample name MGG29570_1680015392 scientific_name uncultured Clostridiaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934765 SAMEA112934165 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334822. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934165 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29571_1680015372 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 94.62 completeness software checkM_v1.1 contamination score 0.89 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334822 of study SRP273833. sample derived from SAMN15648793 sample name MGG29571_1680015372 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934766 SAMEA112934166 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334822. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934166 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29572_1680015340 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 85.7 completeness software checkM_v1.1 contamination score 0.59 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334822 of study SRP273833. sample derived from SAMN15648793 sample name MGG29572_1680015340 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934767 SAMEA112934167 239935 Akkermansia muciniphila This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334819. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934167 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29575_1680015352 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 97.96 completeness software checkM_v1.1 contamination score 0.0 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334819 of study SRP273833. sample derived from SAMN15648794 sample name MGG29575_1680015352 scientific_name Akkermansia muciniphila sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934768 SAMEA112934168 194843 uncultured Bacteroidales bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334819. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934168 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29577_1680015414 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 54.4 completeness software checkM_v1.1 contamination score 0.0 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334819 of study SRP273833. sample derived from SAMN15648794 sample name MGG29577_1680015414 scientific_name uncultured Bacteroidales bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934769 SAMEA112934169 538949 uncultured Alistipes sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334819. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934169 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29578_1680015361 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 97.02 completeness software checkM_v1.1 contamination score 0.48 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334819 of study SRP273833. sample derived from SAMN15648794 sample name MGG29578_1680015361 scientific_name uncultured Alistipes sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934770 SAMEA112934170 538949 uncultured Alistipes sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334819. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934170 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29579_1680015392 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.08 completeness software checkM_v1.1 contamination score 0.16 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334819 of study SRP273833. sample derived from SAMN15648794 sample name MGG29579_1680015392 scientific_name uncultured Alistipes sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934771 SAMEA112934171 538949 uncultured Alistipes sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334819. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934171 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29581_1680015432 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 99.49 completeness software checkM_v1.1 contamination score 0.0 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334819 of study SRP273833. sample derived from SAMN15648794 sample name MGG29581_1680015432 scientific_name uncultured Alistipes sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934772 SAMEA112934172 1981031 uncultured Mailhella sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334819. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934172 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29582_1680015352 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.22 completeness software checkM_v1.1 contamination score 0.59 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334819 of study SRP273833. sample derived from SAMN15648794 sample name MGG29582_1680015352 scientific_name uncultured Mailhella sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934773 SAMEA112934173 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334819. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934173 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29583_1680015414 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 95.98 completeness software checkM_v1.1 contamination score 1.15 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334819 of study SRP273833. sample derived from SAMN15648794 sample name MGG29583_1680015414 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934774 SAMEA112934174 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334819. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934174 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29584_1680015407 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 96.64 completeness software checkM_v1.1 contamination score 0.34 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334819 of study SRP273833. sample derived from SAMN15648794 sample name MGG29584_1680015407 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934775 SAMEA112934175 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334819. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934175 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29585_1680015349 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 74.24 completeness software checkM_v1.1 contamination score 1.57 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334819 of study SRP273833. sample derived from SAMN15648794 sample name MGG29585_1680015349 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934776 SAMEA112934176 1905347 uncultured Ruthenibacterium sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334819. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934176 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29586_1680015430 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 81.06 completeness software checkM_v1.1 contamination score 0.91 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334819 of study SRP273833. sample derived from SAMN15648794 sample name MGG29586_1680015430 scientific_name uncultured Ruthenibacterium sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934777 SAMEA112934177 876416 uncultured Odoribacter sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334819. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934177 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29587_1680015429 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.92 completeness software checkM_v1.1 contamination score 0.0 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334819 of study SRP273833. sample derived from SAMN15648794 sample name MGG29587_1680015429 scientific_name uncultured Odoribacter sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934778 SAMEA112934178 348578 uncultured Porphyromonadaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334819. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934178 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:06Z INSDC last update 2023-04-23T08:23:06Z INSDC status public Submitter Id MGG29588_1680015418 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 97.34 completeness software checkM_v1.1 contamination score 0.0 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334819 of study SRP273833. sample derived from SAMN15648794 sample name MGG29588_1680015418 scientific_name uncultured Porphyromonadaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934779 SAMEA112934179 328812 Parabacteroides goldsteinii This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334819. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934179 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:06Z INSDC last update 2023-04-23T08:23:06Z INSDC status public Submitter Id MGG29589_1680015416 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.08 completeness software checkM_v1.1 contamination score 0.58 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334819 of study SRP273833. sample derived from SAMN15648794 sample name MGG29589_1680015416 scientific_name Parabacteroides goldsteinii sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934780 SAMEA112934180 159272 uncultured Prevotella sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334819. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934180 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:06Z INSDC last update 2023-04-23T08:23:06Z INSDC status public Submitter Id MGG29590_1680015394 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 99.44 completeness software checkM_v1.1 contamination score 0.0 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334819 of study SRP273833. sample derived from SAMN15648794 sample name MGG29590_1680015394 scientific_name uncultured Prevotella sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934781 SAMEA112934181 538949 uncultured Alistipes sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334819. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934181 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:06Z INSDC last update 2023-04-23T08:23:06Z INSDC status public Submitter Id MGG29591_1680015368 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.51 completeness software checkM_v1.1 contamination score 0.96 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334819 of study SRP273833. sample derived from SAMN15648794 sample name MGG29591_1680015368 scientific_name uncultured Alistipes sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934782 SAMEA112934182 194843 uncultured Bacteroidales bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334819. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934182 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:06Z INSDC last update 2023-04-23T08:23:06Z INSDC status public Submitter Id MGG29592_1680015356 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 99.42 completeness software checkM_v1.1 contamination score 0.96 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334819 of study SRP273833. sample derived from SAMN15648794 sample name MGG29592_1680015356 scientific_name uncultured Bacteroidales bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934783 SAMEA112934183 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334819. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934183 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:06Z INSDC last update 2023-04-23T08:23:06Z INSDC status public Submitter Id MGG29593_1680015340 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.3 completeness software checkM_v1.1 contamination score 1.64 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334819 of study SRP273833. sample derived from SAMN15648794 sample name MGG29593_1680015340 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934784 SAMEA112934184 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334819. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934184 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:06Z INSDC last update 2023-04-23T08:23:06Z INSDC status public Submitter Id MGG29594_1680015363 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 96.57 completeness software checkM_v1.1 contamination score 1.72 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334819 of study SRP273833. sample derived from SAMN15648794 sample name MGG29594_1680015363 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934785 SAMEA112934185 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334819. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934185 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29595_1680015369 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 95.06 completeness software checkM_v1.1 contamination score 2.52 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334819 of study SRP273833. sample derived from SAMN15648794 sample name MGG29595_1680015369 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934786 SAMEA112934186 876416 uncultured Odoribacter sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334819. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934186 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29597_1680015372 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.92 completeness software checkM_v1.1 contamination score 1.08 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334819 of study SRP273833. sample derived from SAMN15648794 sample name MGG29597_1680015372 scientific_name uncultured Odoribacter sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934787 SAMEA112934187 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334819. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934187 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29598_1680015380 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.3 completeness software checkM_v1.1 contamination score 0.19 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334819 of study SRP273833. sample derived from SAMN15648794 sample name MGG29598_1680015380 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934788 SAMEA112934188 162156 uncultured Bacteroides sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334819. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934188 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29600_1680015390 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 97.11 completeness software checkM_v1.1 contamination score 0.37 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334819 of study SRP273833. sample derived from SAMN15648794 sample name MGG29600_1680015390 scientific_name uncultured Bacteroides sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934789 SAMEA112934189 1796646 Muribaculum intestinale This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334819. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934189 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29601_1680015350 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 97.17 completeness software checkM_v1.1 contamination score 0.0 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334819 of study SRP273833. sample derived from SAMN15648794 sample name MGG29601_1680015350 scientific_name Muribaculum intestinale sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934790 SAMEA112934190 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334819. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934190 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29602_1680015364 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 96.1 completeness software checkM_v1.1 contamination score 0.39 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334819 of study SRP273833. sample derived from SAMN15648794 sample name MGG29602_1680015364 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934791 SAMEA112934191 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334819. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934191 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29603_1680015369 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 93.31 completeness software checkM_v1.1 contamination score 0.15 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334819 of study SRP273833. sample derived from SAMN15648794 sample name MGG29603_1680015369 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934792 SAMEA112934192 538949 uncultured Alistipes sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334819. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934192 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29604_1680015396 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 94.77 completeness software checkM_v1.1 contamination score 0.48 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334819 of study SRP273833. sample derived from SAMN15648794 sample name MGG29604_1680015396 scientific_name uncultured Alistipes sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934793 SAMEA112934193 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334819. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934193 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29605_1680015427 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 69.08 completeness software checkM_v1.1 contamination score 2.95 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334819 of study SRP273833. sample derived from SAMN15648794 sample name MGG29605_1680015427 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934794 SAMEA112934194 1796652 Turicimonas muris This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334819. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934194 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29606_1680015345 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.75 completeness software checkM_v1.1 contamination score 0.0 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334819 of study SRP273833. sample derived from SAMN15648794 sample name MGG29606_1680015345 scientific_name Turicimonas muris sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934795 SAMEA112934195 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334819. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934195 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29607_1680015377 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 96.98 completeness software checkM_v1.1 contamination score 0.88 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334819 of study SRP273833. sample derived from SAMN15648794 sample name MGG29607_1680015377 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934796 SAMEA112934196 348578 uncultured Porphyromonadaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334819. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934196 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29608_1680015349 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 95.26 completeness software checkM_v1.1 contamination score 0.38 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334819 of study SRP273833. sample derived from SAMN15648794 sample name MGG29608_1680015349 scientific_name uncultured Porphyromonadaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934797 SAMEA112934197 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334819. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934197 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29609_1680015352 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 94.48 completeness software checkM_v1.1 contamination score 0.38 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334819 of study SRP273833. sample derived from SAMN15648794 sample name MGG29609_1680015352 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934798 SAMEA112934198 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334819. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934198 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29610_1680015430 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 96.05 completeness software checkM_v1.1 contamination score 0.17 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334819 of study SRP273833. sample derived from SAMN15648794 sample name MGG29610_1680015430 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934799 SAMEA112934199 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334819. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934199 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29611_1680015397 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 78.11 completeness software checkM_v1.1 contamination score 0.0 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334819 of study SRP273833. sample derived from SAMN15648794 sample name MGG29611_1680015397 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934800 SAMEA112934200 59620 uncultured Clostridium sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334819. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934200 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29612_1680015338 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 75.73 completeness software checkM_v1.1 contamination score 3.36 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334819 of study SRP273833. sample derived from SAMN15648794 sample name MGG29612_1680015338 scientific_name uncultured Clostridium sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934801 SAMEA112934201 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334819. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934201 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29613_1680015431 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 69.82 completeness software checkM_v1.1 contamination score 0.38 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334819 of study SRP273833. sample derived from SAMN15648794 sample name MGG29613_1680015431 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934802 SAMEA112934202 77133 uncultured bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334819. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934202 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29614_1680015397 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 83.97 completeness software checkM_v1.1 contamination score 1.14 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334819 of study SRP273833. sample derived from SAMN15648794 sample name MGG29614_1680015397 scientific_name uncultured bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934803 SAMEA112934203 91750 uncultured Alphaproteobacteria bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334819. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934203 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29615_1680015388 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 90.57 completeness software checkM_v1.1 contamination score 1.08 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334819 of study SRP273833. sample derived from SAMN15648794 sample name MGG29615_1680015388 scientific_name uncultured Alphaproteobacteria bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934804 SAMEA112934204 2768039 uncultured Duncaniella sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334819. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934204 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29616_1680015404 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 97.36 completeness software checkM_v1.1 contamination score 0.75 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334819 of study SRP273833. sample derived from SAMN15648794 sample name MGG29616_1680015404 scientific_name uncultured Duncaniella sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934805 SAMEA112934205 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334819. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934205 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29617_1680015376 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 80.93 completeness software checkM_v1.1 contamination score 0.69 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334819 of study SRP273833. sample derived from SAMN15648794 sample name MGG29617_1680015376 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934806 SAMEA112934206 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334819. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934206 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29618_1680015401 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 93.93 completeness software checkM_v1.1 contamination score 0.63 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334819 of study SRP273833. sample derived from SAMN15648794 sample name MGG29618_1680015401 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934807 SAMEA112934207 508451 Lactobacillus taiwanensis This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334819. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934207 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29619_1680015340 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 77.36 completeness software checkM_v1.1 contamination score 0.78 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334819 of study SRP273833. sample derived from SAMN15648794 sample name MGG29619_1680015340 scientific_name Lactobacillus taiwanensis sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934808 SAMEA112934208 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334819. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934208 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29620_1680015381 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 84.66 completeness software checkM_v1.1 contamination score 0.38 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334819 of study SRP273833. sample derived from SAMN15648794 sample name MGG29620_1680015381 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934809 SAMEA112934209 538949 uncultured Alistipes sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334818. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934209 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29623_1680015420 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 92.31 completeness software checkM_v1.1 contamination score 0.16 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334818 of study SRP273833. sample derived from SAMN15656440 sample name MGG29623_1680015420 scientific_name uncultured Alistipes sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934810 SAMEA112934210 538949 uncultured Alistipes sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334818. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934210 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29625_1680015345 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 96.22 completeness software checkM_v1.1 contamination score 1.44 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334818 of study SRP273833. sample derived from SAMN15656440 sample name MGG29625_1680015345 scientific_name uncultured Alistipes sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934811 SAMEA112934211 194843 uncultured Bacteroidales bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334818. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934211 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:06Z INSDC last update 2023-04-23T08:23:06Z INSDC status public Submitter Id MGG29627_1680015403 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 99.04 completeness software checkM_v1.1 contamination score 2.56 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334818 of study SRP273833. sample derived from SAMN15656440 sample name MGG29627_1680015403 scientific_name uncultured Bacteroidales bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934812 SAMEA112934212 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334818. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934212 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:06Z INSDC last update 2023-04-23T08:23:06Z INSDC status public Submitter Id MGG29628_1680015429 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 95.98 completeness software checkM_v1.1 contamination score 0.57 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334818 of study SRP273833. sample derived from SAMN15656440 sample name MGG29628_1680015429 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934813 SAMEA112934213 538949 uncultured Alistipes sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334818. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934213 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:06Z INSDC last update 2023-04-23T08:23:06Z INSDC status public Submitter Id MGG29629_1680015400 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 99.52 completeness software checkM_v1.1 contamination score 0.0 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334818 of study SRP273833. sample derived from SAMN15656440 sample name MGG29629_1680015400 scientific_name uncultured Alistipes sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934814 SAMEA112934214 1981031 uncultured Mailhella sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334818. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934214 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:06Z INSDC last update 2023-04-23T08:23:06Z INSDC status public Submitter Id MGG29630_1680015370 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.22 completeness software checkM_v1.1 contamination score 0.0 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334818 of study SRP273833. sample derived from SAMN15656440 sample name MGG29630_1680015370 scientific_name uncultured Mailhella sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934815 SAMEA112934215 2682970 uncultured Candidatus Melainabacteria bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334818. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934215 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:06Z INSDC last update 2023-04-23T08:23:06Z INSDC status public Submitter Id MGG29631_1680015405 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 92.31 completeness software checkM_v1.1 contamination score 1.14 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334818 of study SRP273833. sample derived from SAMN15656440 sample name MGG29631_1680015405 scientific_name uncultured Candidatus Melainabacteria bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934816 SAMEA112934216 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334818. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934216 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:06Z INSDC last update 2023-04-23T08:23:06Z INSDC status public Submitter Id MGG29632_1680015386 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 78.41 completeness software checkM_v1.1 contamination score 0.0 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334818 of study SRP273833. sample derived from SAMN15656440 sample name MGG29632_1680015386 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934817 SAMEA112934217 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334818. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934217 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:06Z INSDC last update 2023-04-23T08:23:06Z INSDC status public Submitter Id MGG29633_1680015360 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 95.27 completeness software checkM_v1.1 contamination score 0.68 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334818 of study SRP273833. sample derived from SAMN15656440 sample name MGG29633_1680015360 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934818 SAMEA112934218 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334818. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934218 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:06Z INSDC last update 2023-04-23T08:23:06Z INSDC status public Submitter Id MGG29634_1680015340 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 99.33 completeness software checkM_v1.1 contamination score 0.34 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334818 of study SRP273833. sample derived from SAMN15656440 sample name MGG29634_1680015340 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934819 SAMEA112934219 328812 Parabacteroides goldsteinii This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334818. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934219 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:06Z INSDC last update 2023-04-23T08:23:06Z INSDC status public Submitter Id MGG29635_1680015361 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 99.23 completeness software checkM_v1.1 contamination score 0.19 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334818 of study SRP273833. sample derived from SAMN15656440 sample name MGG29635_1680015361 scientific_name Parabacteroides goldsteinii sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934820 SAMEA112934220 538949 uncultured Alistipes sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334818. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934220 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:06Z INSDC last update 2023-04-23T08:23:06Z INSDC status public Submitter Id MGG29636_1680015413 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.08 completeness software checkM_v1.1 contamination score 0.96 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334818 of study SRP273833. sample derived from SAMN15656440 sample name MGG29636_1680015413 scientific_name uncultured Alistipes sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934821 SAMEA112934221 876416 uncultured Odoribacter sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334818. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934221 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:06Z INSDC last update 2023-04-23T08:23:06Z INSDC status public Submitter Id MGG29637_1680015382 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 99.46 completeness software checkM_v1.1 contamination score 0.0 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334818 of study SRP273833. sample derived from SAMN15656440 sample name MGG29637_1680015382 scientific_name uncultured Odoribacter sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934822 SAMEA112934222 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334818. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934222 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:06Z INSDC last update 2023-04-23T08:23:06Z INSDC status public Submitter Id MGG29638_1680015363 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.02 completeness software checkM_v1.1 contamination score 1.72 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334818 of study SRP273833. sample derived from SAMN15656440 sample name MGG29638_1680015363 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934823 SAMEA112934223 348578 uncultured Porphyromonadaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334818. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934223 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:06Z INSDC last update 2023-04-23T08:23:06Z INSDC status public Submitter Id MGG29639_1680015436 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 97.36 completeness software checkM_v1.1 contamination score 0.0 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334818 of study SRP273833. sample derived from SAMN15656440 sample name MGG29639_1680015436 scientific_name uncultured Porphyromonadaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934824 SAMEA112934224 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334818. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934224 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:06Z INSDC last update 2023-04-23T08:23:06Z INSDC status public Submitter Id MGG29640_1680015362 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 96.61 completeness software checkM_v1.1 contamination score 1.44 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334818 of study SRP273833. sample derived from SAMN15656440 sample name MGG29640_1680015362 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934825 SAMEA112934225 538949 uncultured Alistipes sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334818. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934225 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:06Z INSDC last update 2023-04-23T08:23:06Z INSDC status public Submitter Id MGG29641_1680015436 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 97.92 completeness software checkM_v1.1 contamination score 2.4 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334818 of study SRP273833. sample derived from SAMN15656440 sample name MGG29641_1680015436 scientific_name uncultured Alistipes sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934826 SAMEA112934226 1796646 Muribaculum intestinale This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334818. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934226 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:06Z INSDC last update 2023-04-23T08:23:06Z INSDC status public Submitter Id MGG29642_1680015367 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 97.17 completeness software checkM_v1.1 contamination score 0.38 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334818 of study SRP273833. sample derived from SAMN15656440 sample name MGG29642_1680015367 scientific_name Muribaculum intestinale sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934827 SAMEA112934227 91750 uncultured Alphaproteobacteria bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334818. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934227 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29643_1680015383 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 86.81 completeness software checkM_v1.1 contamination score 0.0 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334818 of study SRP273833. sample derived from SAMN15656440 sample name MGG29643_1680015383 scientific_name uncultured Alphaproteobacteria bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934828 SAMEA112934228 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334818. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934228 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29644_1680015355 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 97.92 completeness software checkM_v1.1 contamination score 0.0 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334818 of study SRP273833. sample derived from SAMN15656440 sample name MGG29644_1680015355 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934829 SAMEA112934229 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334818. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934229 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29645_1680015351 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 92.17 completeness software checkM_v1.1 contamination score 2.01 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334818 of study SRP273833. sample derived from SAMN15656440 sample name MGG29645_1680015351 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934830 SAMEA112934230 91750 uncultured Alphaproteobacteria bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334818. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934230 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29646_1680015400 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 95.7 completeness software checkM_v1.1 contamination score 0.0 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334818 of study SRP273833. sample derived from SAMN15656440 sample name MGG29646_1680015400 scientific_name uncultured Alphaproteobacteria bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934831 SAMEA112934231 446043 uncultured Lachnospira sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334818. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934231 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29648_1680015387 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 97.15 completeness software checkM_v1.1 contamination score 0.16 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334818 of study SRP273833. sample derived from SAMN15656440 sample name MGG29648_1680015387 scientific_name uncultured Lachnospira sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934832 SAMEA112934232 876416 uncultured Odoribacter sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334818. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934232 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29650_1680015340 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 99.46 completeness software checkM_v1.1 contamination score 0.54 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334818 of study SRP273833. sample derived from SAMN15656440 sample name MGG29650_1680015340 scientific_name uncultured Odoribacter sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934833 SAMEA112934233 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334818. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934233 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29651_1680015365 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 96.81 completeness software checkM_v1.1 contamination score 0.75 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334818 of study SRP273833. sample derived from SAMN15656440 sample name MGG29651_1680015365 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934834 SAMEA112934234 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334818. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934234 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29652_1680015350 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 97.99 completeness software checkM_v1.1 contamination score 1.68 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334818 of study SRP273833. sample derived from SAMN15656440 sample name MGG29652_1680015350 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934835 SAMEA112934235 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334818. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934235 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29654_1680015347 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.68 completeness software checkM_v1.1 contamination score 0.53 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334818 of study SRP273833. sample derived from SAMN15656440 sample name MGG29654_1680015347 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934836 SAMEA112934236 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334818. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934236 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29655_1680015350 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 90.94 completeness software checkM_v1.1 contamination score 0.22 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334818 of study SRP273833. sample derived from SAMN15656440 sample name MGG29655_1680015350 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934837 SAMEA112934237 1796652 Turicimonas muris This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334818. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934237 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29656_1680015344 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.75 completeness software checkM_v1.1 contamination score 0.0 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334818 of study SRP273833. sample derived from SAMN15656440 sample name MGG29656_1680015344 scientific_name Turicimonas muris sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934838 SAMEA112934238 165185 uncultured Eubacterium sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334818. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934238 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29657_1680015428 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 95.03 completeness software checkM_v1.1 contamination score 2.39 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334818 of study SRP273833. sample derived from SAMN15656440 sample name MGG29657_1680015428 scientific_name uncultured Eubacterium sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934839 SAMEA112934239 538949 uncultured Alistipes sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334818. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934239 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29658_1680015364 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 95.53 completeness software checkM_v1.1 contamination score 0.0 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334818 of study SRP273833. sample derived from SAMN15656440 sample name MGG29658_1680015364 scientific_name uncultured Alistipes sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934840 SAMEA112934240 194843 uncultured Bacteroidales bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334818. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934240 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29659_1680015376 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 64.97 completeness software checkM_v1.1 contamination score 0.0 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334818 of study SRP273833. sample derived from SAMN15656440 sample name MGG29659_1680015376 scientific_name uncultured Bacteroidales bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934841 SAMEA112934241 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334818. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934241 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29660_1680015390 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 97.01 completeness software checkM_v1.1 contamination score 0.75 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334818 of study SRP273833. sample derived from SAMN15656440 sample name MGG29660_1680015390 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934842 SAMEA112934242 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334818. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934242 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29661_1680015407 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 89.95 completeness software checkM_v1.1 contamination score 3.55 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334818 of study SRP273833. sample derived from SAMN15656440 sample name MGG29661_1680015407 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934843 SAMEA112934243 2768039 uncultured Duncaniella sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334818. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934243 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29662_1680015351 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.15 completeness software checkM_v1.1 contamination score 0.75 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334818 of study SRP273833. sample derived from SAMN15656440 sample name MGG29662_1680015351 scientific_name uncultured Duncaniella sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934844 SAMEA112934244 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334818. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934244 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29663_1680015404 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 95.0 completeness software checkM_v1.1 contamination score 2.2 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334818 of study SRP273833. sample derived from SAMN15656440 sample name MGG29663_1680015404 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934845 SAMEA112934245 348578 uncultured Porphyromonadaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334818. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934245 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29664_1680015377 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 96.79 completeness software checkM_v1.1 contamination score 0.38 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334818 of study SRP273833. sample derived from SAMN15656440 sample name MGG29664_1680015377 scientific_name uncultured Porphyromonadaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934846 SAMEA112934246 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334818. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934246 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29665_1680015344 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 97.99 completeness software checkM_v1.1 contamination score 0.89 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334818 of study SRP273833. sample derived from SAMN15656440 sample name MGG29665_1680015344 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934847 SAMEA112934247 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334818. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934247 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29666_1680015429 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 94.7 completeness software checkM_v1.1 contamination score 0.09 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334818 of study SRP273833. sample derived from SAMN15656440 sample name MGG29666_1680015429 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934848 SAMEA112934248 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334818. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934248 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29667_1680015354 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 95.64 completeness software checkM_v1.1 contamination score 3.71 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334818 of study SRP273833. sample derived from SAMN15656440 sample name MGG29667_1680015354 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934849 SAMEA112934249 195049 uncultured Clostridiaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334818. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934249 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29668_1680015355 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 78.96 completeness software checkM_v1.1 contamination score 1.54 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334818 of study SRP273833. sample derived from SAMN15656440 sample name MGG29668_1680015355 scientific_name uncultured Clostridiaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934850 SAMEA112934250 1796613 Bacteroides caecimuris This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334818. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934250 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29669_1680015342 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 86.75 completeness software checkM_v1.1 contamination score 2.14 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334818 of study SRP273833. sample derived from SAMN15656440 sample name MGG29669_1680015342 scientific_name Bacteroides caecimuris sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934851 SAMEA112934251 59620 uncultured Clostridium sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334818. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934251 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29670_1680015409 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 77.39 completeness software checkM_v1.1 contamination score 4.03 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334818 of study SRP273833. sample derived from SAMN15656440 sample name MGG29670_1680015409 scientific_name uncultured Clostridium sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934852 SAMEA112934252 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334818. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934252 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29671_1680015435 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 95.62 completeness software checkM_v1.1 contamination score 0.0 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334818 of study SRP273833. sample derived from SAMN15656440 sample name MGG29671_1680015435 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934853 SAMEA112934253 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334818. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934253 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29672_1680015422 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 89.42 completeness software checkM_v1.1 contamination score 0.57 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334818 of study SRP273833. sample derived from SAMN15656440 sample name MGG29672_1680015422 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934854 SAMEA112934254 512314 uncultured Roseburia sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334818. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934254 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29673_1680015361 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 88.72 completeness software checkM_v1.1 contamination score 2.16 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334818 of study SRP273833. sample derived from SAMN15656440 sample name MGG29673_1680015361 scientific_name uncultured Roseburia sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934855 SAMEA112934255 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334818. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934255 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29674_1680015354 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 89.85 completeness software checkM_v1.1 contamination score 0.75 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334818 of study SRP273833. sample derived from SAMN15656440 sample name MGG29674_1680015354 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934856 SAMEA112934256 244328 uncultured Clostridia bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334818. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934256 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29675_1680015337 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 75.5 completeness software checkM_v1.1 contamination score 0.7 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334818 of study SRP273833. sample derived from SAMN15656440 sample name MGG29675_1680015337 scientific_name uncultured Clostridia bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934857 SAMEA112934257 1905347 uncultured Ruthenibacterium sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334818. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934257 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29676_1680015338 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 87.59 completeness software checkM_v1.1 contamination score 0.0 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334818 of study SRP273833. sample derived from SAMN15656440 sample name MGG29676_1680015338 scientific_name uncultured Ruthenibacterium sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934858 SAMEA112934258 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334818. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934258 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29678_1680015416 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 75.03 completeness software checkM_v1.1 contamination score 0.67 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334818 of study SRP273833. sample derived from SAMN15656440 sample name MGG29678_1680015416 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934859 SAMEA112934259 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334818. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934259 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29679_1680015382 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 83.81 completeness software checkM_v1.1 contamination score 1.06 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334818 of study SRP273833. sample derived from SAMN15656440 sample name MGG29679_1680015382 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934860 SAMEA112934260 329911 uncultured Peptococcaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334818. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934260 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29680_1680015382 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 60.86 completeness software checkM_v1.1 contamination score 0.0 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334818 of study SRP273833. sample derived from SAMN15656440 sample name MGG29680_1680015382 scientific_name uncultured Peptococcaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934861 SAMEA112934261 239935 Akkermansia muciniphila This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334849. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934261 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29681_1680015410 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 97.96 completeness software checkM_v1.1 contamination score 0.0 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334849 of study SRP273833. sample derived from SAMN15648795 sample name MGG29681_1680015410 scientific_name Akkermansia muciniphila sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934862 SAMEA112934262 538949 uncultured Alistipes sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334849. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934262 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29682_1680015426 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.46 completeness software checkM_v1.1 contamination score 0.48 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334849 of study SRP273833. sample derived from SAMN15648795 sample name MGG29682_1680015426 scientific_name uncultured Alistipes sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934863 SAMEA112934263 194843 uncultured Bacteroidales bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334849. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934263 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29683_1680015353 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 84.78 completeness software checkM_v1.1 contamination score 1.13 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334849 of study SRP273833. sample derived from SAMN15648795 sample name MGG29683_1680015353 scientific_name uncultured Bacteroidales bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934864 SAMEA112934264 194843 uncultured Bacteroidales bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334849. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934264 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29684_1680015431 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.94 completeness software checkM_v1.1 contamination score 1.2 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334849 of study SRP273833. sample derived from SAMN15648795 sample name MGG29684_1680015431 scientific_name uncultured Bacteroidales bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934865 SAMEA112934265 538949 uncultured Alistipes sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334849. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934265 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29685_1680015397 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.05 completeness software checkM_v1.1 contamination score 0.16 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334849 of study SRP273833. sample derived from SAMN15648795 sample name MGG29685_1680015397 scientific_name uncultured Alistipes sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934866 SAMEA112934266 538949 uncultured Alistipes sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334849. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934266 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29686_1680015383 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.79 completeness software checkM_v1.1 contamination score 0.0 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334849 of study SRP273833. sample derived from SAMN15648795 sample name MGG29686_1680015383 scientific_name uncultured Alistipes sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934867 SAMEA112934267 1981031 uncultured Mailhella sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334849. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934267 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29688_1680015398 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.22 completeness software checkM_v1.1 contamination score 0.0 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334849 of study SRP273833. sample derived from SAMN15648795 sample name MGG29688_1680015398 scientific_name uncultured Mailhella sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934868 SAMEA112934268 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334849. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934268 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29689_1680015408 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 91.95 completeness software checkM_v1.1 contamination score 0.57 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334849 of study SRP273833. sample derived from SAMN15648795 sample name MGG29689_1680015408 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934869 SAMEA112934269 876416 uncultured Odoribacter sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334849. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934269 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29690_1680015388 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 92.47 completeness software checkM_v1.1 contamination score 0.0 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334849 of study SRP273833. sample derived from SAMN15648795 sample name MGG29690_1680015388 scientific_name uncultured Odoribacter sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934870 SAMEA112934270 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334849. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934270 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29691_1680015350 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 97.15 completeness software checkM_v1.1 contamination score 0.34 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334849 of study SRP273833. sample derived from SAMN15648795 sample name MGG29691_1680015350 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934871 SAMEA112934271 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334849. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934271 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29692_1680015413 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 74.75 completeness software checkM_v1.1 contamination score 0.69 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334849 of study SRP273833. sample derived from SAMN15648795 sample name MGG29692_1680015413 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934872 SAMEA112934272 328812 Parabacteroides goldsteinii This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334849. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934272 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29693_1680015427 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.46 completeness software checkM_v1.1 contamination score 0.19 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334849 of study SRP273833. sample derived from SAMN15648795 sample name MGG29693_1680015427 scientific_name Parabacteroides goldsteinii sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934873 SAMEA112934273 77133 uncultured bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334849. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934273 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29694_1680015388 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 88.89 completeness software checkM_v1.1 contamination score 0.85 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334849 of study SRP273833. sample derived from SAMN15648795 sample name MGG29694_1680015388 scientific_name uncultured bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934874 SAMEA112934274 348578 uncultured Porphyromonadaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334849. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934274 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29695_1680015372 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 97.36 completeness software checkM_v1.1 contamination score 0.0 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334849 of study SRP273833. sample derived from SAMN15648795 sample name MGG29695_1680015372 scientific_name uncultured Porphyromonadaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934875 SAMEA112934275 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334849. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934275 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29696_1680015428 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 96.71 completeness software checkM_v1.1 contamination score 0.13 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334849 of study SRP273833. sample derived from SAMN15648795 sample name MGG29696_1680015428 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934876 SAMEA112934276 91750 uncultured Alphaproteobacteria bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334849. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934276 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29697_1680015379 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 95.7 completeness software checkM_v1.1 contamination score 0.0 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334849 of study SRP273833. sample derived from SAMN15648795 sample name MGG29697_1680015379 scientific_name uncultured Alphaproteobacteria bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934877 SAMEA112934277 538949 uncultured Alistipes sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334849. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934277 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29698_1680015369 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 97.42 completeness software checkM_v1.1 contamination score 0.96 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334849 of study SRP273833. sample derived from SAMN15648795 sample name MGG29698_1680015369 scientific_name uncultured Alistipes sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934878 SAMEA112934278 538949 uncultured Alistipes sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334849. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934278 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29699_1680015433 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.35 completeness software checkM_v1.1 contamination score 1.51 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334849 of study SRP273833. sample derived from SAMN15648795 sample name MGG29699_1680015433 scientific_name uncultured Alistipes sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934879 SAMEA112934279 876416 uncultured Odoribacter sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334849. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934279 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29700_1680015388 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 99.46 completeness software checkM_v1.1 contamination score 0.54 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334849 of study SRP273833. sample derived from SAMN15648795 sample name MGG29700_1680015388 scientific_name uncultured Odoribacter sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934880 SAMEA112934280 1796646 Muribaculum intestinale This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334849. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934280 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29701_1680015366 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 96.42 completeness software checkM_v1.1 contamination score 0.0 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334849 of study SRP273833. sample derived from SAMN15648795 sample name MGG29701_1680015366 scientific_name Muribaculum intestinale sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934881 SAMEA112934281 244328 uncultured Clostridia bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334849. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934281 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29702_1680015409 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 80.81 completeness software checkM_v1.1 contamination score 0.89 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334849 of study SRP273833. sample derived from SAMN15648795 sample name MGG29702_1680015409 scientific_name uncultured Clostridia bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934882 SAMEA112934282 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334849. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934282 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29703_1680015415 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.68 completeness software checkM_v1.1 contamination score 0.38 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334849 of study SRP273833. sample derived from SAMN15648795 sample name MGG29703_1680015415 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934883 SAMEA112934283 707003 uncultured Oscillospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334849. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934283 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29704_1680015405 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 81.28 completeness software checkM_v1.1 contamination score 0.97 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334849 of study SRP273833. sample derived from SAMN15648795 sample name MGG29704_1680015405 scientific_name uncultured Oscillospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934884 SAMEA112934284 194843 uncultured Bacteroidales bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334849. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934284 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29705_1680015424 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 96.92 completeness software checkM_v1.1 contamination score 0.0 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334849 of study SRP273833. sample derived from SAMN15648795 sample name MGG29705_1680015424 scientific_name uncultured Bacteroidales bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934885 SAMEA112934285 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334849. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934285 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29706_1680015420 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 96.61 completeness software checkM_v1.1 contamination score 0.38 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334849 of study SRP273833. sample derived from SAMN15648795 sample name MGG29706_1680015420 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934886 SAMEA112934286 163362 uncultured Bacteroidaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334849. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934286 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29707_1680015385 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.15 completeness software checkM_v1.1 contamination score 0.19 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334849 of study SRP273833. sample derived from SAMN15648795 sample name MGG29707_1680015385 scientific_name uncultured Bacteroidaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934887 SAMEA112934287 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334849. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934287 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29708_1680015409 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 94.97 completeness software checkM_v1.1 contamination score 0.75 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334849 of study SRP273833. sample derived from SAMN15648795 sample name MGG29708_1680015409 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934888 SAMEA112934288 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334849. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934288 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29709_1680015407 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 94.84 completeness software checkM_v1.1 contamination score 0.0 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334849 of study SRP273833. sample derived from SAMN15648795 sample name MGG29709_1680015407 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934889 SAMEA112934289 1796652 Turicimonas muris This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334849. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934289 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29710_1680015374 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.75 completeness software checkM_v1.1 contamination score 0.0 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334849 of study SRP273833. sample derived from SAMN15648795 sample name MGG29710_1680015374 scientific_name Turicimonas muris sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934890 SAMEA112934290 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334849. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934290 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29711_1680015364 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.47 completeness software checkM_v1.1 contamination score 0.13 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334849 of study SRP273833. sample derived from SAMN15648795 sample name MGG29711_1680015364 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934891 SAMEA112934291 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334849. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934291 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29712_1680015416 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 97.92 completeness software checkM_v1.1 contamination score 0.0 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334849 of study SRP273833. sample derived from SAMN15648795 sample name MGG29712_1680015416 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934892 SAMEA112934292 162156 uncultured Bacteroides sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334849. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934292 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29713_1680015389 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 97.56 completeness software checkM_v1.1 contamination score 0.0 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334849 of study SRP273833. sample derived from SAMN15648795 sample name MGG29713_1680015389 scientific_name uncultured Bacteroides sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934893 SAMEA112934293 2768039 uncultured Duncaniella sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334849. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934293 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29715_1680015436 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.19 completeness software checkM_v1.1 contamination score 0.75 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334849 of study SRP273833. sample derived from SAMN15648795 sample name MGG29715_1680015436 scientific_name uncultured Duncaniella sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934894 SAMEA112934294 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334849. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934294 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29716_1680015365 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 97.51 completeness software checkM_v1.1 contamination score 0.5 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334849 of study SRP273833. sample derived from SAMN15648795 sample name MGG29716_1680015365 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934895 SAMEA112934295 348578 uncultured Porphyromonadaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334849. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934295 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29717_1680015354 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 96.79 completeness software checkM_v1.1 contamination score 0.38 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334849 of study SRP273833. sample derived from SAMN15648795 sample name MGG29717_1680015354 scientific_name uncultured Porphyromonadaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934896 SAMEA112934296 59620 uncultured Clostridium sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334849. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934296 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29718_1680015426 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 76.74 completeness software checkM_v1.1 contamination score 4.03 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334849 of study SRP273833. sample derived from SAMN15648795 sample name MGG29718_1680015426 scientific_name uncultured Clostridium sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934897 SAMEA112934297 508451 Lactobacillus taiwanensis This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334849. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934297 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29720_1680015384 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 81.13 completeness software checkM_v1.1 contamination score 1.42 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334849 of study SRP273833. sample derived from SAMN15648795 sample name MGG29720_1680015384 scientific_name Lactobacillus taiwanensis sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934898 SAMEA112934298 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334849. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934298 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29721_1680015415 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 91.03 completeness software checkM_v1.1 contamination score 0.75 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334849 of study SRP273833. sample derived from SAMN15648795 sample name MGG29721_1680015415 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934899 SAMEA112934299 91750 uncultured Alphaproteobacteria bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334849. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934299 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29723_1680015435 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 76.04 completeness software checkM_v1.1 contamination score 0.55 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334849 of study SRP273833. sample derived from SAMN15648795 sample name MGG29723_1680015435 scientific_name uncultured Alphaproteobacteria bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934900 SAMEA112934300 91750 uncultured Alphaproteobacteria bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334849. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934300 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29724_1680015383 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 70.55 completeness software checkM_v1.1 contamination score 0.13 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334849 of study SRP273833. sample derived from SAMN15648795 sample name MGG29724_1680015383 scientific_name uncultured Alphaproteobacteria bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934901 SAMEA112934301 59620 uncultured Clostridium sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334849. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934301 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29725_1680015381 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 72.66 completeness software checkM_v1.1 contamination score 2.85 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334849 of study SRP273833. sample derived from SAMN15648795 sample name MGG29725_1680015381 scientific_name uncultured Clostridium sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934902 SAMEA112934302 2682970 uncultured Candidatus Melainabacteria bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334849. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934302 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29726_1680015343 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 66.12 completeness software checkM_v1.1 contamination score 0.0 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334849 of study SRP273833. sample derived from SAMN15648795 sample name MGG29726_1680015343 scientific_name uncultured Candidatus Melainabacteria bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934903 SAMEA112934303 194843 uncultured Bacteroidales bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334848. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934303 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29727_1680015419 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.89 completeness software checkM_v1.1 contamination score 0.48 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334848 of study SRP273833. sample derived from SAMN15648796 sample name MGG29727_1680015419 scientific_name uncultured Bacteroidales bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934904 SAMEA112934304 538949 uncultured Alistipes sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334848. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934304 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29728_1680015424 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 100 completeness software checkM_v1.1 contamination score 4.81 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334848 of study SRP273833. sample derived from SAMN15648796 sample name MGG29728_1680015424 scientific_name uncultured Alistipes sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934905 SAMEA112934305 538949 uncultured Alistipes sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334848. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934305 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29729_1680015365 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 93.91 completeness software checkM_v1.1 contamination score 0.0 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334848 of study SRP273833. sample derived from SAMN15648796 sample name MGG29729_1680015365 scientific_name uncultured Alistipes sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934906 SAMEA112934306 1981031 uncultured Mailhella sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334848. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934306 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29730_1680015354 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.22 completeness software checkM_v1.1 contamination score 0.0 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334848 of study SRP273833. sample derived from SAMN15648796 sample name MGG29730_1680015354 scientific_name uncultured Mailhella sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934907 SAMEA112934307 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334848. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934307 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29731_1680015433 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 89.08 completeness software checkM_v1.1 contamination score 0.57 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334848 of study SRP273833. sample derived from SAMN15648796 sample name MGG29731_1680015433 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934908 SAMEA112934308 876091 uncultured Oscillibacter sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334848. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934308 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29732_1680015343 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 96.94 completeness software checkM_v1.1 contamination score 4.38 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334848 of study SRP273833. sample derived from SAMN15648796 sample name MGG29732_1680015343 scientific_name uncultured Oscillibacter sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934909 SAMEA112934309 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334848. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934309 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29733_1680015371 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 86.21 completeness software checkM_v1.1 contamination score 1.15 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334848 of study SRP273833. sample derived from SAMN15648796 sample name MGG29733_1680015371 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934910 SAMEA112934310 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334848. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934310 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29734_1680015340 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 97.97 completeness software checkM_v1.1 contamination score 0.68 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334848 of study SRP273833. sample derived from SAMN15648796 sample name MGG29734_1680015340 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934911 SAMEA112934311 172733 uncultured Eubacteriales bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334848. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934311 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29735_1680015418 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 97.99 completeness software checkM_v1.1 contamination score 0.67 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334848 of study SRP273833. sample derived from SAMN15648796 sample name MGG29735_1680015418 scientific_name uncultured Eubacteriales bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934912 SAMEA112934312 538949 uncultured Alistipes sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334848. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934312 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29736_1680015346 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 93.3 completeness software checkM_v1.1 contamination score 0.8 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334848 of study SRP273833. sample derived from SAMN15648796 sample name MGG29736_1680015346 scientific_name uncultured Alistipes sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934913 SAMEA112934313 2682970 uncultured Candidatus Melainabacteria bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334848. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934313 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29737_1680015347 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 92.31 completeness software checkM_v1.1 contamination score 1.14 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334848 of study SRP273833. sample derived from SAMN15648796 sample name MGG29737_1680015347 scientific_name uncultured Candidatus Melainabacteria bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934914 SAMEA112934314 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334848. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934314 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29738_1680015384 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 99.33 completeness software checkM_v1.1 contamination score 0.34 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334848 of study SRP273833. sample derived from SAMN15648796 sample name MGG29738_1680015384 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934915 SAMEA112934315 876416 uncultured Odoribacter sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334848. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934315 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29739_1680015355 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 99.46 completeness software checkM_v1.1 contamination score 0.0 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334848 of study SRP273833. sample derived from SAMN15648796 sample name MGG29739_1680015355 scientific_name uncultured Odoribacter sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934916 SAMEA112934316 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334848. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934316 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:04Z INSDC last update 2023-04-23T08:23:04Z INSDC status public Submitter Id MGG29740_1680015355 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.85 completeness software checkM_v1.1 contamination score 1.63 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334848 of study SRP273833. sample derived from SAMN15648796 sample name MGG29740_1680015355 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934917 SAMEA112934317 239935 Akkermansia muciniphila This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334848. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934317 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29741_1680015352 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 96.6 completeness software checkM_v1.1 contamination score 0.0 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334848 of study SRP273833. sample derived from SAMN15648796 sample name MGG29741_1680015352 scientific_name Akkermansia muciniphila sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934918 SAMEA112934318 1751881 uncultured Hungatella sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334848. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934318 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29742_1680015369 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.1 completeness software checkM_v1.1 contamination score 0.79 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334848 of study SRP273833. sample derived from SAMN15648796 sample name MGG29742_1680015369 scientific_name uncultured Hungatella sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934919 SAMEA112934319 77133 uncultured bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334848. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934319 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29743_1680015409 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 88.89 completeness software checkM_v1.1 contamination score 0.85 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334848 of study SRP273833. sample derived from SAMN15648796 sample name MGG29743_1680015409 scientific_name uncultured bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934920 SAMEA112934320 538949 uncultured Alistipes sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334848. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934320 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29744_1680015414 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 98.3 completeness software checkM_v1.1 contamination score 0.64 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334848 of study SRP273833. sample derived from SAMN15648796 sample name MGG29744_1680015414 scientific_name uncultured Alistipes sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934921 SAMEA112934321 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334848. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934321 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29745_1680015347 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 97.7 completeness software checkM_v1.1 contamination score 5.48 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334848 of study SRP273833. sample derived from SAMN15648796 sample name MGG29745_1680015347 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934922 SAMEA112934322 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334848. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934322 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29746_1680015390 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 97.91 completeness software checkM_v1.1 contamination score 1.72 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334848 of study SRP273833. sample derived from SAMN15648796 sample name MGG29746_1680015390 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934923 SAMEA112934323 876416 uncultured Odoribacter sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334848. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934323 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29748_1680015420 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 99.46 completeness software checkM_v1.1 contamination score 0.54 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334848 of study SRP273833. sample derived from SAMN15648796 sample name MGG29748_1680015420 scientific_name uncultured Odoribacter sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934924 SAMEA112934324 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334848. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934324 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29750_1680015414 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 96.12 completeness software checkM_v1.1 contamination score 1.27 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334848 of study SRP273833. sample derived from SAMN15648796 sample name MGG29750_1680015414 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934925 SAMEA112934325 159272 uncultured Prevotella sp. This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334848. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934325 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29751_1680015369 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 55.14 completeness software checkM_v1.1 contamination score 0.0 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334848 of study SRP273833. sample derived from SAMN15648796 sample name MGG29751_1680015369 scientific_name uncultured Prevotella sp. sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934926 SAMEA112934326 1796646 Muribaculum intestinale This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334848. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934326 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29752_1680015374 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 97.92 completeness software checkM_v1.1 contamination score 0.0 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334848 of study SRP273833. sample derived from SAMN15648796 sample name MGG29752_1680015374 scientific_name Muribaculum intestinale sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934927 SAMEA112934327 194843 uncultured Bacteroidales bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334848. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934327 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29753_1680015434 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 96.16 completeness software checkM_v1.1 contamination score 0.0 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334848 of study SRP273833. sample derived from SAMN15648796 sample name MGG29753_1680015434 scientific_name uncultured Bacteroidales bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934928 SAMEA112934328 2301481 uncultured Muribaculaceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334848. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934328 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29754_1680015374 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 96.33 completeness software checkM_v1.1 contamination score 1.13 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334848 of study SRP273833. sample derived from SAMN15648796 sample name MGG29754_1680015374 scientific_name uncultured Muribaculaceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach ERS14934929 SAMEA112934329 297314 uncultured Lachnospiraceae bacterium This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set SRP273833. This sample represents a Metagenome-assembled genome from the metagenomic run SRR12334848. ENA-FIRST-PUBLIC 2023-04-23 ENA-LAST-UPDATE 2023-04-23 External Id SAMEA112934329 INSDC center alias UNIVERSITY OF GENEVA INSDC center name UNIVERSITY OF GENEVA INSDC first public 2023-04-23T08:23:05Z INSDC last update 2023-04-23T08:23:05Z INSDC status public Submitter Id MGG29755_1680015432 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software metaSpades_v3.13 binning parameters default binning software metagenome_atlas_v2.3 broad-scale environmental context Host-associated collection date 2017-11-28 completeness score 93.04 completeness software checkM_v1.1 contamination score 3.26 environmental medium Feces geographic location (country and/or sea) Switzerland geographic location (latitude) not provided geographic location (longitude) not provided investigation type metagenome-assembled genome isolation_source mouse gut metagenome local environmental context Mouse digestive system metagenomic source mouse gut metagenome project name This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR12334848 of study SRP273833. sample derived from SAMN15648796 sample name MGG29755_1680015432 scientific_name uncultured Lachnospiraceae bacterium sequencing method Illumina HiSeq 4000 taxonomic identity marker multi-marker approach