ERX252526 SC_EXP_9475_5#78 <STUDY_REF accession="ERP001776" refname="PlasmoGEM__Towards_an_open__access__genome_scale_Plasmodium_genetic_modification_resource-sc-2012-09-11T15:37:16Z-2358" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001776</PRIMARY_ID> <SUBMITTER_ID namespace="SC">PlasmoGEM__Towards_an_open__access__genome_scale_Plasmodium_genetic_modification_resource-sc-2012-09-11T15:37:16Z-2358</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 6743374, constructed from sample accession ERS208863 for study accession ERP001776. This is part of an Illumina multiplexed sequencing run (9475_5). This submission includes reads tagged with the sequence GCATGGCT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS208863" refname="2358STDY5461618-sc-2013-01-28T10:26:07Z-1554077" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS208863</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2358STDY5461618-sc-2013-01-28T10:26:07Z-1554077</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>6743374</LIBRARY_NAME> <LIBRARY_STRATEGY>CLONE</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="241" NOMINAL_SDEV="93"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_9475_5#79" center_name="SC" accession="ERX252527"> <IDENTIFIERS> <PRIMARY_ID>ERX252527</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_9475_5#79</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001776" refname="PlasmoGEM__Towards_an_open__access__genome_scale_Plasmodium_genetic_modification_resource-sc-2012-09-11T15:37:16Z-2358" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001776</PRIMARY_ID> <SUBMITTER_ID namespace="SC">PlasmoGEM__Towards_an_open__access__genome_scale_Plasmodium_genetic_modification_resource-sc-2012-09-11T15:37:16Z-2358</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 6743386, constructed from sample accession ERS208864 for study accession ERP001776. This is part of an Illumina multiplexed sequencing run (9475_5). This submission includes reads tagged with the sequence GTTAGCCT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS208864" refname="2358STDY5461619-sc-2013-01-28T10:26:11Z-1554078" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS208864</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2358STDY5461619-sc-2013-01-28T10:26:11Z-1554078</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>6743386</LIBRARY_NAME> <LIBRARY_STRATEGY>CLONE</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="241" NOMINAL_SDEV="93"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_9475_5#80" center_name="SC" accession="ERX252528"> <IDENTIFIERS> <PRIMARY_ID>ERX252528</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_9475_5#80</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001776" refname="PlasmoGEM__Towards_an_open__access__genome_scale_Plasmodium_genetic_modification_resource-sc-2012-09-11T15:37:16Z-2358" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001776</PRIMARY_ID> <SUBMITTER_ID namespace="SC">PlasmoGEM__Towards_an_open__access__genome_scale_Plasmodium_genetic_modification_resource-sc-2012-09-11T15:37:16Z-2358</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 6743398, constructed from sample accession ERS208865 for study accession ERP001776. This is part of an Illumina multiplexed sequencing run (9475_5). This submission includes reads tagged with the sequence GTCGCTAT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS208865" refname="2358STDY5461620-sc-2013-01-28T10:26:12Z-1554079" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS208865</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2358STDY5461620-sc-2013-01-28T10:26:12Z-1554079</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>6743398</LIBRARY_NAME> <LIBRARY_STRATEGY>CLONE</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="241" NOMINAL_SDEV="93"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_9475_5#81" center_name="SC" accession="ERX252529"> <IDENTIFIERS> <PRIMARY_ID>ERX252529</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_9475_5#81</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001776" refname="PlasmoGEM__Towards_an_open__access__genome_scale_Plasmodium_genetic_modification_resource-sc-2012-09-11T15:37:16Z-2358" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001776</PRIMARY_ID> <SUBMITTER_ID namespace="SC">PlasmoGEM__Towards_an_open__access__genome_scale_Plasmodium_genetic_modification_resource-sc-2012-09-11T15:37:16Z-2358</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 6743315, constructed from sample accession ERS208866 for study accession ERP001776. This is part of an Illumina multiplexed sequencing run (9475_5). This submission includes reads tagged with the sequence GGAATGAT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS208866" refname="2358STDY5461621-sc-2013-01-28T10:26:14Z-1554080" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS208866</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2358STDY5461621-sc-2013-01-28T10:26:14Z-1554080</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>6743315</LIBRARY_NAME> <LIBRARY_STRATEGY>CLONE</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="241" NOMINAL_SDEV="93"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_9475_5#82" center_name="SC" accession="ERX252530"> <IDENTIFIERS> <PRIMARY_ID>ERX252530</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_9475_5#82</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001776" refname="PlasmoGEM__Towards_an_open__access__genome_scale_Plasmodium_genetic_modification_resource-sc-2012-09-11T15:37:16Z-2358" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001776</PRIMARY_ID> <SUBMITTER_ID namespace="SC">PlasmoGEM__Towards_an_open__access__genome_scale_Plasmodium_genetic_modification_resource-sc-2012-09-11T15:37:16Z-2358</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 6743327, constructed from sample accession ERS208867 for study accession ERP001776. This is part of an Illumina multiplexed sequencing run (9475_5). This submission includes reads tagged with the sequence GAGCCAAT.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS208867" refname="2358STDY5461622-sc-2013-01-28T10:26:15Z-1554081" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS208867</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2358STDY5461622-sc-2013-01-28T10:26:15Z-1554081</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>6743327</LIBRARY_NAME> <LIBRARY_STRATEGY>CLONE</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="241" NOMINAL_SDEV="93"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_9475_5#83" center_name="SC" accession="ERX252531"> <IDENTIFIERS> <PRIMARY_ID>ERX252531</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_9475_5#83</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001776" refname="PlasmoGEM__Towards_an_open__access__genome_scale_Plasmodium_genetic_modification_resource-sc-2012-09-11T15:37:16Z-2358" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001776</PRIMARY_ID> <SUBMITTER_ID namespace="SC">PlasmoGEM__Towards_an_open__access__genome_scale_Plasmodium_genetic_modification_resource-sc-2012-09-11T15:37:16Z-2358</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 6743339, constructed from sample accession ERS208868 for study accession ERP001776. This is part of an Illumina multiplexed sequencing run (9475_5). This submission includes reads tagged with the sequence GCTCCTTG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS208868" refname="2358STDY5461623-sc-2013-01-28T10:26:16Z-1554082" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS208868</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2358STDY5461623-sc-2013-01-28T10:26:16Z-1554082</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>6743339</LIBRARY_NAME> <LIBRARY_STRATEGY>CLONE</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="241" NOMINAL_SDEV="93"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_9475_5#84" center_name="SC" accession="ERX252532"> <IDENTIFIERS> <PRIMARY_ID>ERX252532</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_9475_5#84</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001776" refname="PlasmoGEM__Towards_an_open__access__genome_scale_Plasmodium_genetic_modification_resource-sc-2012-09-11T15:37:16Z-2358" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001776</PRIMARY_ID> <SUBMITTER_ID namespace="SC">PlasmoGEM__Towards_an_open__access__genome_scale_Plasmodium_genetic_modification_resource-sc-2012-09-11T15:37:16Z-2358</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 6743351, constructed from sample accession ERS208869 for study accession ERP001776. This is part of an Illumina multiplexed sequencing run (9475_5). This submission includes reads tagged with the sequence GTAAGGTG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS208869" refname="2358STDY5461624-sc-2013-01-28T10:26:17Z-1554083" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS208869</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2358STDY5461624-sc-2013-01-28T10:26:17Z-1554083</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>6743351</LIBRARY_NAME> <LIBRARY_STRATEGY>CLONE</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="241" NOMINAL_SDEV="93"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_9475_5#85" center_name="SC" accession="ERX252533"> <IDENTIFIERS> <PRIMARY_ID>ERX252533</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_9475_5#85</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001776" refname="PlasmoGEM__Towards_an_open__access__genome_scale_Plasmodium_genetic_modification_resource-sc-2012-09-11T15:37:16Z-2358" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001776</PRIMARY_ID> <SUBMITTER_ID namespace="SC">PlasmoGEM__Towards_an_open__access__genome_scale_Plasmodium_genetic_modification_resource-sc-2012-09-11T15:37:16Z-2358</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 6743363, constructed from sample accession ERS208870 for study accession ERP001776. This is part of an Illumina multiplexed sequencing run (9475_5). This submission includes reads tagged with the sequence GAGGATGG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS208870" refname="2358STDY5461625-sc-2013-01-28T10:26:18Z-1554084" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS208870</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2358STDY5461625-sc-2013-01-28T10:26:18Z-1554084</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>6743363</LIBRARY_NAME> <LIBRARY_STRATEGY>CLONE</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="241" NOMINAL_SDEV="93"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> <EXPERIMENT alias="SC_EXP_9475_5#86" center_name="SC" accession="ERX252534"> <IDENTIFIERS> <PRIMARY_ID>ERX252534</PRIMARY_ID> <SUBMITTER_ID namespace="SC">SC_EXP_9475_5#86</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="ERP001776" refname="PlasmoGEM__Towards_an_open__access__genome_scale_Plasmodium_genetic_modification_resource-sc-2012-09-11T15:37:16Z-2358" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERP001776</PRIMARY_ID> <SUBMITTER_ID namespace="SC">PlasmoGEM__Towards_an_open__access__genome_scale_Plasmodium_genetic_modification_resource-sc-2012-09-11T15:37:16Z-2358</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of library 6743375, constructed from sample accession ERS208871 for study accession ERP001776. This is part of an Illumina multiplexed sequencing run (9475_5). This submission includes reads tagged with the sequence GTTGTCGG.</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR accession="ERS208871" refname="2358STDY5461626-sc-2013-01-28T10:26:20Z-1554085" refcenter="SC"> <IDENTIFIERS> <PRIMARY_ID>ERS208871</PRIMARY_ID> <SUBMITTER_ID namespace="SC">2358STDY5461626-sc-2013-01-28T10:26:20Z-1554085</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>6743375</LIBRARY_NAME> <LIBRARY_STRATEGY>CLONE</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="241" NOMINAL_SDEV="93"/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> </EXPERIMENT_SET>