<?xml version="1.0" encoding="UTF-8"?>
<EXPERIMENT_SET xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
  <EXPERIMENT alias="2014-01-20 experiment 1" center_name="Department Periodontology, University Hospital Munster, Germany" accession="ERX380394">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX380394</PRIMARY_ID>
      <SUBMITTER_ID namespace="Department Periodontology, University Hospital Munster, Germany">2014-01-20 experiment 1</SUBMITTER_ID>
      <SUBMITTER_ID namespace="PERIO-UKM">2014-01-20 experiment 1</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina MiSeq paired end sequencing; Illumina Paired Reads</TITLE>
    <STUDY_REF refname="ena-STUDY-PERIO-UKM-24-01-2014-09:13:13:516-79" accession="ERP004642" refcenter="PERIO-UKM">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP004642</PRIMARY_ID>
        <SUBMITTER_ID namespace="PERIO-UKM">ena-STUDY-PERIO-UKM-24-01-2014-09:13:13:516-79</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Design Description</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR refname="F49" accession="ERS396003" refcenter="PERIO-UKM">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS396003</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA2337807</EXTERNAL_ID>
          <SUBMITTER_ID namespace="PERIO-UKM">F49</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>Random Lib</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="300"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL/>
      </LIBRARY_DESCRIPTOR>
      <!--Please note that the spot descriptor is no longer required for most formats.-->
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>500</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_LABEL>1</READ_LABEL>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_LABEL>2</READ_LABEL>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Reverse</READ_TYPE>
            <BASE_COORD>251</BASE_COORD>
            <!--The BASE_COORD is the coordinate for the read. For the                              second application read, this will be 1 + length of the                              first read. E.g., for first read of length 38 + second read of length 38                              this is 39.-->
            <!--READ_LABEL can be used to reference separate forward and                              reverse files. Delete this tag if both Forward and Reverse                              reads occur in the same file (e.g., srf, sff etc).-->
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina MiSeq</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
</EXPERIMENT_SET>
