<?xml version="1.0" encoding="UTF-8"?>
<SAMPLE_SET xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
  <SAMPLE alias="SAMEA7431012" accession="ERS5189224">
    <IDENTIFIERS>
      <PRIMARY_ID>ERS5189224</PRIMARY_ID>
      <EXTERNAL_ID namespace="BioSample">SAMEA7431012</EXTERNAL_ID>
    </IDENTIFIERS>
    <TITLE>TEDDY OU Gut MAG</TITLE>
    <SAMPLE_NAME>
      <TAXON_ID>165185</TAXON_ID>
      <SCIENTIFIC_NAME>uncultured Eubacterium sp.</SCIENTIFIC_NAME>
    </SAMPLE_NAME>
    <DESCRIPTION>This sample represents a metagenomic bin co-assembled from the metagenomic run(s) of subject 1287560689: SRR7560076,SRR7568683,SRR7560889,SRR7566827,SRR7559613,SRR7569625,SRR7569375,SRR7557228,SRR7562865,SRR7559468,SRR7561404,SRR7561531,SRR7557751,SRR7561364,SRR7569855,SRR7568126,SRR7561796,SRR7556987,SRR7562046,SRR7562274,SRR7566005,SRR7567366,SRR7565508,SRR7566282</DESCRIPTION>
    <SAMPLE_ATTRIBUTES>
      <SAMPLE_ATTRIBUTE>
        <TAG>ENA-FIRST-PUBLIC</TAG>
        <VALUE>2021-01-30T04:09:59Z</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>ENA-LAST-UPDATE</TAG>
        <VALUE>2020-10-15T06:24:49Z</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>External Id</TAG>
        <VALUE>SAMEA7431012</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>INSDC center name</TAG>
        <VALUE>Pan Lab at OU</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>INSDC first public</TAG>
        <VALUE>2021-01-30T04:09:59Z</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>INSDC last update</TAG>
        <VALUE>2020-10-15T06:24:49Z</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>INSDC status</TAG>
        <VALUE>public</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>MAG coverage software</TAG>
        <VALUE>bowtie2; v2.3.5.1</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>Submitter Id</TAG>
        <VALUE>TEDDY_OU_SUBJ1287560689_MAG72</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>assembly quality</TAG>
        <VALUE>Many fragments with little to no review of assembly other than reporting of standard assembly statistics</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>assembly software</TAG>
        <VALUE>SPAdes;3.13.1;default parameters with metaSPAdes mode</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>binning parameters</TAG>
        <VALUE>--minContig 2000</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>binning software</TAG>
        <VALUE>MetaBAT;2.12.1</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>collection date</TAG>
        <VALUE>not provided</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>completeness score</TAG>
        <VALUE>97.54</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>completeness software</TAG>
        <VALUE>CheckM;v1.0.13</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>contamination score</TAG>
        <VALUE>1.34</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>environment (biome)</TAG>
        <VALUE>human gut</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>environment (feature)</TAG>
        <VALUE>human gut</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>environment (material)</TAG>
        <VALUE>fecal</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>geographic location (country and/or sea)</TAG>
        <VALUE>restricted access</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>geographic location (latitude)</TAG>
        <VALUE>restricted access</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>geographic location (longitude)</TAG>
        <VALUE>restricted access</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>host sex</TAG>
        <VALUE>male</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>investigation type</TAG>
        <VALUE>metagenome-assembled genome</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>isolation source</TAG>
        <VALUE>human gut</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>metagenomic source</TAG>
        <VALUE>human gut metagenome</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>project name</TAG>
        <VALUE>PRJEB40730</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>sample derived from</TAG>
        <VALUE>SAMN09408435,SAMN09409266,SAMN09409679,SAMN09410134,SAMN09410853,SAMN09410930,SAMN09411512,SAMN09411672,SAMN09411782,SAMN09411973,SAMN09412011,SAMN09412094,SAMN09412190,SAMN09412596,SAMN09412606,SAMN09413766,SAMN09414901,SAMN09415897,SAMN09415965,SAMN09417597,SAMN09418583,SAMN09418984,SAMN09419638,SAMN09420059</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>sample name</TAG>
        <VALUE>TEDDY_OU_SUBJ1287560689_MAG72</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>scientific_name</TAG>
        <VALUE>uncultured Eubacterium sp.</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>sequencing method</TAG>
        <VALUE>Illumina HiSeq 2000</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>taxonomic classification</TAG>
        <VALUE>GTDB-Tk;v1.3.0(reference from GTDB Release 95,species rank classification,default parameters)</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>taxonomic identity marker</TAG>
        <VALUE>multi-marker approach</VALUE>
      </SAMPLE_ATTRIBUTE>
    </SAMPLE_ATTRIBUTES>
  </SAMPLE>
</SAMPLE_SET>
